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Alignment for radish unigene UN16999

               1      -     51
UN16999        --> GATCAAATATTTTAGCATAACATAAATAATCCTATGAAGGACTGGTGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..................................................
EX763676       <-- ..................................................
FD551457       <-- ..................................................
FD552254       <-- ..................................................
FD552051       <-- ..................................................
EY929282       <-- ..................................................
EY937613       <-- ..................................................
FD542932       <-- ..................................................
EX887970       <-- ..................................................
EW715866       <-- ..................................................
EY950163       <-- ..................................................
EV531937       --> GATCAAATATTTTAGCATAACATAAATAATCCTATGAAGGACTGGGGTAT
EY933889       --> .............gGCATAACATAAATAATCCTATGAAGGACTGGTGTAT
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> .......................................gggaataactg
EY925754       --> ..................................................
EX892617       --> ..................................................

               51     -    101
UN16999        --> AAATAACTCAAGAGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..........................................CGAAGGAG
EX763676       <-- ..................................................
FD551457       <-- ..................................................
FD552254       <-- ..................................................
FD552051       <-- ..................................................
EY929282       <-- ..................................................
EY937613       <-- ..................................................
FD542932       <-- ..................................................
EX887970       <-- ..................................................
EW715866       <-- ..................................................
EY950163       <-- ..................................................
EV531937       --> AAATAACTCAAGAGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
EY933889       --> AAATAACTCAAGAGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
EW720362       --> ........CAAGAGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
EX909504       --> ............AGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
FD547885       --> caacaacagtaaAGTTCAAAGAAACTGTCGATAGAAACAAGACGATGGAA
EY925754       --> ............gGTTCAAAGAAACTGTCGATAGAAACAAGACGAAGGAG
EX892617       --> ................CAAAGAAACTGTCGATAGAAACAAGACGAAGGAG

               101    -    151
UN16999        --> TCCAAACGGTTCATGAGAAAATGCAGTGATTTGCCCCTCAGAGGCAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TCCAAACGGTTCATGAGAAAATGCAGTGATTTGCCCCTCAGAGGCAAATT  Raphanus raphanistrum subsp. maritimus
EX763676       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- ..................................................  Raphanus sativus var. oleiformis
EY937613       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- ..................................................  Raphanus sativus var. oleiformis
EW715866       <-- ..................................................  Raphanus sativus var. oleiformis
EY950163       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> TCCAAACGGTTCATGAGAAAATGCAGTGATTTGCCCCTCAGAGGCAAATT  Raphanus raphanistrum subsp. maritimus
EY933889       --> TCCAAACGGTTCATGAGAAAATGCAGTGATTTGCCCCTCAGAGGCAAATT  Raphanus sativus cv Early Scarlet Globe
EW720362       --> TCCAAACGGTTCATGAGAAAATGCAGCGATTTGCCCCTC-GAGGCAAATT  Raphanus sativus var. oleiformis
EX909504       --> TCCAAACGGTTCATGAGAAAATGCAGTGATTTGCCCCTCAGAGGCAAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> TCCAAAAGGTTCATGAGAAAATGCAGCGATTTGCCTCTCA-AGGCAAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> TCCAAACGGTTCATGAGAAAATGCAGCGATTTGCCCCTC-GAGGCAAATT  Raphanus sativus var. oleiformis
EX892617       --> TCCAAACGGTTCATGAAAAAATGCAGCGATTTGCCCCTC-GAGGCAAATT  Raphanus sativus var. oleiformis

               151    -    201
UN16999        --> TTAAAGTTTTACAACAGAAACACCAGACGATGCATCATTACACCATATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TTAAAGTTTTACAACAGAAACACCAGACGATGCATCATTACACCATATCT  Raphanus raphanistrum subsp. maritimus
EX763676       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- ..................................................  Raphanus sativus var. oleiformis
EY937613       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- ..................................................  Raphanus sativus var. oleiformis
EW715866       <-- ..................................................  Raphanus sativus var. oleiformis
EY950163       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> TTAAAGTTTTACAACAGAAACACCAGACGATGCATCATTACACCATATCT  Raphanus raphanistrum subsp. maritimus
EY933889       --> TTAAAGTTTTACAACAGAAACACCAGACGATGCATCATTACACCATATCT  Raphanus sativus cv Early Scarlet Globe
EW720362       --> TTAAAGTTTTACAACAGAAACATCAAACGATGCATCATTACACAATATCT  Raphanus sativus var. oleiformis
EX909504       --> TTAAAGTTTTACAACAGAGACACCAGACGATGCATCATTACACCATATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> TTAAAGTTTTACAACAGAAACACCAAACGATGC--CATTACACAATATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> TTAAAGTTTTACAACAGAAACATCAAACGATGCATCATTACACAATATCT  Raphanus sativus var. oleiformis
EX892617       --> TTAAAGTTTTACAACAGAAACATCAAACGATACATCATTACACAATATCT  Raphanus sativus var. oleiformis

               201    -    251
UN16999        --> AATTTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- AATCTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus raphanistrum subsp. maritimus
EX763676       <-- ..............................AGCATCCATCTCCTCAAGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- ..................................................  Raphanus sativus var. oleiformis
EY937613       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- ..................................................  Raphanus sativus var. oleiformis
EW715866       <-- ..................................................  Raphanus sativus var. oleiformis
EY950163       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> AATCTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus raphanistrum subsp. maritimus
EY933889       --> AATCTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus sativus cv Early Scarlet Globe
EW720362       --> AATTTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus sativus var. oleiformis
EX909504       --> AATCTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> AATTTTGACCCATTTTTTATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> AATTTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus sativus var. oleiformis
EX892617       --> AATTTTGACCCATTTTT-ATCAGTTTAGTCAGCATCCATCTCCTCAAGCG  Raphanus sativus var. oleiformis

               251    -    301
UN16999        --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- CAGTTTTGACTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
EX763676       <-- CAGTTT-GGCTGC-GTCTTTGCTTCTTCTAGAAGATCATCAGGGAC-TTC
FD551457       <-- ...............................................TTC
FD552254       <-- ...............................................cTC
FD552051       <-- ..................................................
EY929282       <-- ..................................................
EY937613       <-- ..................................................
FD542932       <-- ..................................................
EX887970       <-- ..................................................
EW715866       <-- ..................................................
EY950163       <-- ..................................................
EV531937       --> CAGTTTTGACTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
EY933889       --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
EW720362       --> CAGTTTTGGCTGCCATCTTTGCTTCTTCTAGAAGCTCATCAGGGACCTTC
EX909504       --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
FD547885       --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAGAAGATCATCAGGGACCTTC
EY925754       --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAGAAGCTCATCAGGGACCTTC
EX892617       --> CAGTTTTGGCTGCCGTCTTTGCTTCTTCTAAAAGCTCATCAGGGACCTTC

               301    -    351
UN16999        --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EX763676       <-- TGGTGCTCTCTTTTGGACTCCTCGCAA-TCCAGCTCATCTCCAATTCAAA
FD551457       <-- TG-TGCTCTCTTTT-GACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
FD552254       <-- TGGTGCTCTCTTTT-GACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
FD552051       <-- ..GTGCTCTCTTTT-GACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EY929282       <-- ....GCTCTCTTTT-GACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EY937613       <-- ..........................................AATTCAAA
FD542932       <-- ..................................................
EX887970       <-- ..................................................
EW715866       <-- ..................................................
EY950163       <-- ..................................................
EV531937       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EY933889       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EW720362       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EX909504       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
FD547885       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EY925754       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA
EX892617       --> TGGTGCTCTCTTTTTGACTCCTCGCAAATCCAGCTCATCTCCAATTCAAA

               351    -    401
UN16999        --> AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. maritimus
EX763676       <-- AGC-TTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- AGC-TTGTCTT-GGCTTCATCGTGTAGCTTGTAAATGATTTT-GCAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- AGCCT-GTC-CTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- AGCCT-GTCCTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- AGCCTTGTC-CTGGCTTCATCGTGTAGCTTGTAAATTATTTTTGCAACTT  Raphanus sativus var. oleiformis
EY937613       <-- AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTT-GCAACTT  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- .............GCTTCATCGTGTAGCTTGTAAATGATTTT-GCAACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- ......................................TTTTTGCAACTT  Raphanus sativus var. oleiformis
EW715866       <-- ...........................................GCAACTT  Raphanus sativus var. oleiformis
EY950163       <-- ...........................................GCAACTT  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. maritimus
EY933889       --> AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus sativus cv Early Scarlet Globe
EW720362       --> AGCCTTGTCCTTGGCTTCATCGTGTAGCTTGTAAATTATTTTTGCAACTT  Raphanus sativus var. oleiformis
EX909504       --> AGCCTTGTCTTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> AGCCTTGTCCTTGGCTTCATCGTGTAGCTTGTAAATGATTTTTGCAACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> AGCCTTGTCCTTGGCTTCATCGTGTAGCTTGTAAATTATTTTTGCAACTT  Raphanus sativus var. oleiformis
EX892617       --> AGCCTTGTCCTTGGCTTCATCGTGTAGCTTGTAAATTATTTTTGCAACTT  Raphanus sativus var. oleiformis

               401    -    451
UN16999        --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EX763676       <-- CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTT-TCAAT
FD551457       <-- CAATAA-CGCTTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
FD552254       <-- CAATAA-CGACTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
FD552051       <-- CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EY929282       <-- CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EY937613       <-- CAATAA-CGCTTTCTTTGTATGTCATCTCAGATAACTTCAATTTCTCAAT
FD542932       <-- CAATAA-CGCTTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EX887970       <-- CAATAAACGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EW715866       <-- CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EY950163       <-- CAATAA-CGC-TTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EV531937       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EY933889       --> CAATAA-CGCCTTCTTTGTATGTCATCTCAGATAACTTCAATTTCTCAAT
EW720362       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAAATAACTTCAATTTCTCAAT
EX909504       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
FD547885       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EY925754       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT
EX892617       --> CAATAA-CGCCTTCTTTGCATGTCATCTCAGATAACTTCAATTTCTCAAT

               451    -    501
UN16999        --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EX763676       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
FD551457       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
FD552254       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
FD552051       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EY929282       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EY937613       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
FD542932       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EX887970       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EW715866       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EY950163       <-- TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EV531937       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EY933889       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EW720362       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EX909504       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
FD547885       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EY925754       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC
EX892617       --> TTCCGTTTTAGCAGCTTGTTTTCCTTTGCCAATTGCAGCACCAAAGTATC

               501    -    551
UN16999        --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EX763676       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
FD551457       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGTGGTCCATCTTTA
FD552254       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGTGGTCCATCTTTA
FD552051       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGTGGTCCATCTTTA
EY929282       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTACATCTTTA
EY937613       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
FD542932       <-- TATATGAAATACCGGAAGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EX887970       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EW715866       <-- TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EY950163       <-- TATATGGAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EV531937       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EY933889       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EW720362       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
EX909504       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA
FD547885       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGTGGTCCATCTTTA
EY925754       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTACATCTTTA
EX892617       --> TATATGAAATACCGGATGGCTCAATCATGTACAATTGGGGTCCATCTTTA

               551    -    601
UN16999        --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EX763676       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
FD551457       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
FD552254       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
FD552051       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EY929282       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EY937613       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
FD542932       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EX887970       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EW715866       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EY950163       <-- TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EV531937       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EY933889       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EW720362       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EX909504       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
FD547885       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EY925754       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA
EX892617       --> TCATAACCTCCAAGAATGACTCCACAACCAAAAGGCCTAAGCCACCAATA

               601    -    651
UN16999        --> GAGAGTGCATAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- GAGAGTGCATAAATGAACATAACTCGCAACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. maritimus
EX763676       <-- GAGAGTGCATAAATGAACATAACTCGCAACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- GAGAGTGCATAAATGAACATAACTTGCCACACACTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- GAGAGTGCATAAATGAACATAACTTGCCACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- GAGAGTGCATAAATGAACATAACTTGCCACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis
EY937613       <-- GAGAGTGCATAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- GAGAGTGCATAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis
EW715866       <-- GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis
EY950163       <-- GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> GAGAGTGCATAAATGAACATAACTCGCAACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. maritimus
EY933889       --> GAGAGTGCATAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus cv Early Scarlet Globe
EW720362       --> GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis
EX909504       --> GAGAGTGCATAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> GAGAGTGCATAAATGAACATAACTTGCCACACGCTCCGAAAGTTCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis
EX892617       --> GAGAGTACACAAATGAACATAACTTGCAACACGCTCCGAAAGTTCCTTCA  Raphanus sativus var. oleiformis

               651    -    701
UN16999        --> CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCGGATTTG  Raphanus raphanistrum subsp. maritimus
EX763676       <-- CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCAGATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGACTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis
EY937613       <-- CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCAGATTTA  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis
EW715866       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis
EY950163       <-- CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCGGATTTG  Raphanus raphanistrum subsp. maritimus
EY933889       --> CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCAGATTTA  Raphanus sativus cv Early Scarlet Globe
EW720362       --> CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis
EX909504       --> CAGGTACAGCGTCGCCATAAACACTCTCGTAGCTTCTGGCTTCAGATTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGACTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis
EX892617       --> CAGGTACAGCGTCGCCATAAACACTCTCATAGCTTCTGGCTTCAGATTTA  Raphanus sativus var. oleiformis

               701    -    751
UN16999        --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. maritimus
EX763676       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- GTACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCGGCAACAGCCAT  Raphanus sativus var. oleiformis
EY937613       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGTCCAGCAACAGCCAT  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGTCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCGGCAAAAGCCAT  Raphanus sativus var. oleiformis
EW715866       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAACAAGCCCGGCAACAGCCAT  Raphanus sativus var. oleiformis
EY950163       <-- GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCGGCAACAGCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. maritimus
EY933889       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGTCCAGCAACAGCCAT  Raphanus sativus cv Early Scarlet Globe
EW720362       --> GCACGTGCAACAATTTGCCTCCCATCAGCAACAAGCCCGGCAACAGCCAT  Raphanus sativus var. oleiformis
EX909504       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGTCCAGCAACAGCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCAGCAACAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCGGCAACAGCCAT  Raphanus sativus var. oleiformis
EX892617       --> GCACGTGCAACAATTTGCCTCCCATCAGCAGCAAGCCCGGCAACAGCCAT  Raphanus sativus var. oleiformis

               751    -    801
UN16999        --> GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EX763676       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
FD551457       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
FD552254       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
FD552051       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EY929282       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EY937613       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
FD542932       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EX887970       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EW715866       <-- GACAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EY950163       <-- GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EV531937       --> GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAA..........
EY933889       --> GCCAGCATGACGATGAACAGAATGGATCCT....................
EW720362       --> GACAGCATGACGAT....................................
EX909504       --> GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGG............
FD547885       --> GCCAGCATGACGA.....................................
EY925754       --> GCCAGCATGACGATGAACAGAATGGATCCTCCGGTTGGAACCCGGTAGCA
EX892617       --> GCCAGCATGACGATGAAC................................

               801    -    851
UN16999        --> TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
EX763676       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
FD551457       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATCACAATCCCATCCTTG
FD552254       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATCACAATCCCATCCTTG
FD552051       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATCACAATCCCATCCTTG
EY929282       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
EY937613       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
FD542932       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
EX887970       <-- TCATCTTAG.........................................
EW715866       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
EY950163       <-- TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACAATCCCGTCCTTG
EV531937       --> ..................................................
EY933889       --> ..................................................
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> ..................................................
EY925754       --> TCATCTTAGATGCAATGAGCTTCTCCACACCCATTACA............
EX892617       --> ..................................................

               851    -    901
UN16999        --> CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTc..........  Raphanus raphanistrum subsp. maritimus
EX763676       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551457       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552254       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552051       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGAGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929282       <-- CACTTGATTCCAACTACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus sativus var. oleiformis
EY937613       <-- CACTTGATTCCAACTACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus sativus cv Early Scarlet Globe
FD542932       <-- CACTTGATTCCAACAACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887970       <-- ..................................................  Raphanus sativus var. oleiformis
EW715866       <-- CACTTGATTCCAACTACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus sativus var. oleiformis
EY950163       <-- CACTTGATTCCAACTACAGTTCCACTGTTGTCGACAGCTTTGGCGGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
EV531937       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY933889       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720362       --> ..................................................  Raphanus sativus var. oleiformis
EX909504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD547885       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925754       --> ..................................................  Raphanus sativus var. oleiformis
EX892617       --> ..................................................  Raphanus sativus var. oleiformis

               901    -    951
UN16999        --> CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..................................................
EX763676       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
FD551457       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
FD552254       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
FD552051       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
EY929282       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
EY937613       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
FD542932       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
EX887970       <-- ..................................................
EW715866       <-- CTCGATCTGGA--ACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
EY950163       <-- CTCGATCTGGAAAACACGGCCATCGGGAGAGAAGGTCGTGACTGAGAGAT
EV531937       --> ..................................................
EY933889       --> ..................................................
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> ..................................................
EY925754       --> ..................................................
EX892617       --> ..................................................

               951    -   1001
UN16999        --> CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCTTC------AACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..................................................
EX763676       <-- CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCTTCttcaactcc...
FD551457       <-- CGTATCAAGTTCCAATGCTACTCATCTTCTTCTTCTTC------AACTGT
FD552254       <-- CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCTTC------AACTGT
FD552051       <-- CGTATCCAATTCCAATGCTACTCATCTTCTTCTTCTTCcc..........
EY929282       <-- CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCTTCttcttcaactgt
EY937613       <-- CGTATCCAGTTACAATGCTACTCATCTTCTTCTTCTTC------AACTGT
FD542932       <-- CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCAAT------TGTTGT
EX887970       <-- ..................................................
EW715866       <-- CGTATCCAGTTCCAATGCTACTCATCTTCTTCTTCTTCCTCTTCAACTGT
EY950163       <-- CGTATCCAGTTCCAATGCTACTCATCT------TCTTC------AACTGT
EV531937       --> ..................................................
EY933889       --> ..................................................
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> ..................................................
EY925754       --> ..................................................
EX892617       --> ..................................................

               1001   -   1051
UN16999        --> TG--T-TTGC--TC-CTCT-TCTCTCTCTCGCGATTTAAGAAGGATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..................................................
EX763676       <-- ..................................................
FD551457       <-- TG--T-TTGC--TCt...................................
FD552254       <-- TG--T-TTGC--TC-TTCC-TCT...........................
FD552051       <-- ..................................................
EY929282       <-- tgtttcc...........................................
EY937613       <-- TG--T-TTGC--TC-CTCT-TCTCTCTCTCGCGATTTAAGAAGGATCGGA
FD542932       <-- TCACTCTTCCCCTCTCTCTGTCTCTCTCTCGCGATTTAAGAAGGATCGGA
EX887970       <-- ..................................................
EW715866       <-- TG--T-TTGC--TC-CTCT-TCTCTCTCgcccc.................
EY950163       <-- TG--T-TTGC--TC-CTCT-TCTCTCT--CGCGATTTAAGAAGGATCGGA
EV531937       --> ..................................................
EY933889       --> ..................................................
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> ..................................................
EY925754       --> ..................................................
EX892617       --> ..................................................

               1051   -   1101
UN16999        --> GAATGGGGGGTTTTCTTTCTTCTCAAGCCAGAATAGCTTCTAAAGTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527775       <-- ..................................................
EX763676       <-- ..................................................
FD551457       <-- ..................................................
FD552254       <-- ..................................................
FD552051       <-- ..................................................
EY929282       <-- ..................................................
EY937613       <-- GAATGGGGGGTTTTCTTTCTTCTCAAGCCAGAATAGCTTCTAAAGTTCCC
FD542932       <-- GAATGGGGG-TTTTCTTTCTTCTCcc........................
EX887970       <-- ..................................................
EW715866       <-- ..................................................
EY950163       <-- GAATGGGGGGTTTTCTTTCTTCTCAAGCCc....................
EV531937       --> ..................................................
EY933889       --> ..................................................
EW720362       --> ..................................................
EX909504       --> ..................................................
FD547885       --> ..................................................
EY925754       --> ..................................................
EX892617       --> ..................................................