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Alignment for radish unigene UN17021

               1      -     51
UN17021        --> GGAACAAAACGAGAAATCTTGATATTTAAAGTCACTAGAAAGAAACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- .........CGAGAAATCTTGATATTTAAAGTCACTAGAAAGAAACAAAG
EX771747       <-- ..........GAGAAATCTTGATATTTAAAGTCACTAGAAAGAAACAAAG
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> GGAACAAAACGAGAAATCTTGATATTTAAAGTCACTAGAAAGAAACAAAG
EY943325       --> gaAACAAAACGAGAAATCTTGATATTTAAAGTCACTAGAAAGAAACAAAG
FD983371       --> .................ccTGATATTTAAAGTCACTAGAAAGAAACAAGG
FD574841       --> ...................cGATATTTAAAGTCACTAGAAAGAAACAAAG
FD985491       --> ....................agTATTTAAAGTCACTAGAAAGAAACAAAG
FY433724       --> ..................................................

               51     -    101
UN17021        --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
EX771747       <-- TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
EY943325       --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
FD983371       --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
FD574841       --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
FD985491       --> TAGCACAAACCACAAGAAGACCACTAGGCTGCAATAAAACGCTGACAAAA
FY433724       --> ..............................................AAAA

               101    -    151
UN17021        --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- AAA--GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
EX771747       <-- AAAAAGATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
FD987296       <-- .......TGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
EY943325       --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
FD983371       --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
FD574841       --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTAAGTTCAA
FD985491       --> AAAA-GATGCAATAGAACATGATGAAAGGCAACTAGGGTTCTATGTTCAA
FY433724       --> AAAA-GATGCAATAGAACATGATGAAAG-CAACGAGGGTTCTAAGTTCAA

               151    -    201
UN17021        --> CCATTGCAAAAAAAAAAAAAA--CACATCAAAACACCAAAAGGGAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- CCATTGCAAAAAAAAAAAAAAAACACATCAAAACACCAAAAGGGAAACAA  Raphanus sativus var. oleiformis
EX771747       <-- CCATTGCAAAAAAAAAAAAAA--CACATCAAAACACCAAAAGGGAAACAA  Raphanus raphanistrum subsp. landra
FD987296       <-- CCATTGCAAAAAAAAAAAAA---CACATCAAAACACCAAAAGGGAAACAA  Raphanus raphanistrum subsp. landra
FD549856       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541004       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888028       <-- ..................................................  Raphanus sativus var. oleiformis
FD989744       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD566765       --> CCATTGCAAAAAAAAAAAAAAAACACATCAAAACACCAAAAGGGAAACAA  Raphanus sativus var. oleiformis
EY943325       --> CCATTGCAAAAAAAAAAAAAA-ACACATCAAAACACCAAAAGGGAAACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD983371       --> CCATTGCAAAAAAAAAAAAA---CACATCAAAACACCAAAAGGGAAACAA  Raphanus raphanistrum subsp. landra
FD574841       --> CCATTGCAAAAAAAAAAAAAA-ACACATCAAAACACCAAAAGGGAAACAA  Raphanus sativus cv Early Scarlet Globe
FD985491       --> CCATTGCAAAAAAAAAAAAA---CACATCAAAACACCAAAAGGGAAATAA  Raphanus raphanistrum subsp. landra
FY433724       --> CCATTGCAAAAAAAGAAAGAA--CA--TCAAAACACCAAAAAGGAAACAA  Raphanus sativus cv GSK3-1

               201    -    251
UN17021        --> AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
EX771747       <-- AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
FD987296       <-- AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
FD549856       <-- .........................GTGTACTGATGACCCGTT-AGAGTG
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> AGCTTAAATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAAAATG
EY943325       --> AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
FD983371       --> AGCTTAGATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
FD574841       --> AGCTTAAATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAAAATG
FD985491       --> AGCTTAAATAGATAGAGAAAGAGGAGTGTACTGATGACCCGTTTAGAATG
FY433724       --> AGCTTAGATAGATAGAGCAAGAGAAGTGTACTGATGACCCGTTTAGAGTG

               251    -    301
UN17021        --> AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
EX771747       <-- AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
FD987296       <-- AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
FD549856       <-- AAACTACCACACTATCTCACAGTAACGATGTCATCAATCTTCAAAATCAT
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
EY943325       --> AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
FD983371       --> AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
FD574841       --> AAACTACCCCACTACCTCACCGTAACGATGACATCAATCTTCAAAATCAT
FD985491       --> AAACTACCCCACTACCTCACCGTAACGATGTCATCAATCTTCAAAATCAT
FY433724       --> AAACTACCACACTATCTCACAGTAACGATGTCATCAATCTTCAAAATCAT

               301    -    351
UN17021        --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
EX771747       <-- CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FD987296       <-- CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FD549856       <-- C-TTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
EY943325       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FD983371       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FD574841       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAAAG
FD985491       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG
FY433724       --> CCTTACGCATTCAGTTGCGAGAGTGATTGCGCTGGTGCTCACAAGCAGAG

               351    -    401
UN17021        --> GCTGCACCACGTTCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- GCTGCACCACGTTCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTGACA  Raphanus sativus var. oleiformis
EX771747       <-- GCTGCACCACGTTCTCCTCCAAGATATTAGTAATCTGCCCTTTCCTGACA  Raphanus raphanistrum subsp. landra
FD987296       <-- GCTGCACCACGTTCTCCTCCAAGATATTAGTAATCTGCCCTTTCCTGACA  Raphanus raphanistrum subsp. landra
FD549856       <-- GCTGCACCACGTTCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541004       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888028       <-- ..................................................  Raphanus sativus var. oleiformis
FD989744       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD566765       --> GCTGCACCACGTTCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTGACA  Raphanus sativus var. oleiformis
EY943325       --> GCTGCACCACGTCCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTGACA  Raphanus sativus cv Rat-Tail Radish #3870
FD983371       --> GCTGCACCACGTTCTCCTCCAAGATATTAGTAATCTGCCCTTTCCTGACA  Raphanus raphanistrum subsp. landra
FD574841       --> GCTGCACCACGTTCTCCTCCAAAATATTAGTGATCTGCCCTTTCCTGACA  Raphanus sativus cv Early Scarlet Globe
FD985491       --> GCTGCACCACGTTCTCCTCCAAGATATTAGCAATCTGCCCTTTCCTGACA  Raphanus raphanistrum subsp. landra
FY433724       --> GCTGCACCACGTTCTCCTCCAAGATATTAGTGATCTGCCCTTTCCTCACA  Raphanus sativus cv GSK3-1

               401    -    451
UN17021        --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
EX771747       <-- TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD987296       <-- TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD549856       <-- TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD541004       <-- .........................................GAGCTCAGT
EX888028       <-- ..................................................
FD989744       <-- ..................................................
FD566765       --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
EY943325       --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD983371       --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD574841       --> TTGATCCCAAAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FD985491       --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT
FY433724       --> TTGATCCCAGAGTTGATTTCCCCTTGAGCATGCTTGTTCCTGAGCTCAGT

               451    -    501
UN17021        --> CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
EX771747       <-- CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD987296       <-- CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD549856       <-- CACAATGGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD541004       <-- CACAATGGCAATAGGATTAAGAC-TGCATTCTCAGCCAGCGTGTAAGGAA
EX888028       <-- ....................agaCTGCATTCTCAGCCAGCGTGTAAGGAA
FD989744       <-- ..................................................
FD566765       --> CACAATTGCAATAGGATTCAAACCTGCATTCTCAGCCAGCGTGTAAGGAA
EY943325       --> CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD983371       --> CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD574841       --> CACAATTGCAATAGGATTCAAACCTGCATTCTCAGCCAGCGTGTAAGGAA
FD985491       --> CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA
FY433724       --> CACAATTGCAATAGGATTCAGACCTGCATTCTCAGCCAGCGTGTAAGGAA

               501    -    551
UN17021        --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACCTTCCATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACCTTCCATCCCA  Raphanus sativus var. oleiformis
EX771747       <-- TAACCTCCAGAGCTTCAGCGAAAGACTTCACACAGTACCCTTCCATCCCA  Raphanus raphanistrum subsp. landra
FD987296       <-- TAACCTCCAGAGCTTCAGCGAAAGACTTCACACAGTACCCTTCCATCCCA  Raphanus raphanistrum subsp. landra
FD549856       <-- TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAAACTTCCATCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541004       <-- TA-CCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACTTTCCATCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX888028       <-- TAACCTCCAGAGCTTCAGCGAAAGACTTCACGTAGTAACCCTCCATCCCA  Raphanus sativus var. oleiformis
FD989744       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD566765       --> TAACCTCCAAAGCTTCAGCGAAAGACTTCACGCAGTAACCTTCCATCCCA  Raphanus sativus var. oleiformis
EY943325       --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACCTTCCATCCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD983371       --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACACAGTACCCTTCCATCCCA  Raphanus raphanistrum subsp. landra
FD574841       --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACCTTCCATCCCA  Raphanus sativus cv Early Scarlet Globe
FD985491       --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACACAGTACCCTTCCATCCCA  Raphanus raphanistrum subsp. landra
FY433724       --> TAACCTCCAGAGCTTCAGCGAAAGACTTCACGCAGTAACCCTCCATCCCA  Raphanus sativus cv GSK3-1

               551    -    601
UN17021        --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
EX771747       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
FD987296       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGA
FD549856       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
FD541004       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
EX888028       <-- TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
FD989744       <-- ..................................................
FD566765       --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
EY943325       --> TGGAGCACCTTAGCCCAAGCACCCAGCTGCCTCGAGAGCTCAATCTCCGG
FD983371       --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGA
FD574841       --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
FD985491       --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG
FY433724       --> TGGAGCACCTTAGCCCAAGCACCTAGCTGCCTCGAGAGCTCAATCTCCGG

               601    -    651
UN17021        --> CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
EX771747       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
FD987296       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
FD549856       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAAACACCTGACAA
FD541004       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
EX888028       <-- CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAAACACCTGACAA
FD989744       <-- ..................................................
FD566765       --> CGCACCACCTCCCGCAATCAAAAA..........................
EY943325       --> CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
FD983371       --> CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
FD574841       --> CGCACCACCTCCCGCAATCAAAAA..........................
FD985491       --> CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAGACACCTGACAA
FY433724       --> CGCACCACCTCCCGCAATCAAAAACCTCTTGCTCACCAAACACCTGACAA

               651    -    701
UN17021        --> CACACAACGCATCGTGCAGACTCCTCTCGGCTTCATCAAGAACAAGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- CACACAACGCATCGTGCAGACTCCTCTCGGCTTCATCAAGAACAAGCTGG
EX771747       <-- CACAC.............................................
FD987296       <-- CACACAACGCATCGTGCAGACTCATCTCGGCTTCATCAAGAACAAGCTGG
FD549856       <-- CACACAACGCATCGTGCAGACTCCTCTCGGCTTCGTCAAGAACAAGCTGG
FD541004       <-- CACACAACGCATCGTGCAGACTCCTCTCGGCTTCGTCAAGAACAAGCTGG
EX888028       <-- CACACAACGCATCGTGCAGACTCCTCTCGGCTTCGTCAAGAACAAGCTGG
FD989744       <-- ........GCATCGTGCAGACTCCTCTCGGCTTCATCAAGAACAAGCTGG
FD566765       --> ..................................................
EY943325       --> CACACAACGCATCGTGCAGACTCCTCTCGGCTTCATCAAGAACAAGCTGG
FD983371       --> CACACAACGCATCGTGCAGACTCATCTCGGCTTCATCAAGAACAAGCTGG
FD574841       --> ..................................................
FD985491       --> CACACAACGCATCGTGCAGACTCCTCTCGGCTTCATCAAGAACAAGCTGG
FY433724       --> CACACAACGCATCGTGCAGACTCCTCTCGGCTTCGTCAAGAACAAGCTGG

               701    -    751
UN17021        --> TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- TTAGAGCCACGGACGAGAACAGATGTGGTTCTCCCC-ATGTCTTTAATCC
EX771747       <-- ..................................................
FD987296       <-- TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
FD549856       <-- TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
FD541004       <-- TTGGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
EX888028       <-- TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
FD989744       <-- TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCCCATGTCTTTAATCC
FD566765       --> ..................................................
EY943325       --> TTAGAGCCACGGACGAGAACAGATGTGGTTCTCACC-ATGTCTTTAATCC
FD983371       --> TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
FD574841       --> ..................................................
FD985491       --> TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC
FY433724       --> TTAGAGCCACGGACGAGAACAGAGGTGGTTCTCCCC-ATGTCTTTAATCC

               751    -    801
UN17021        --> CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- Cc................................................
EX771747       <-- ..................................................
FD987296       <-- CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGc..
FD549856       <-- CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
FD541004       <-- CAGTAATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
EX888028       <-- CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
FD989744       <-- CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
FD566765       --> ..................................................
EY943325       --> CAGTGATCTTCAAAtct.................................
FD983371       --> CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGc..
FD574841       --> ..................................................
FD985491       --> CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCTTCAACGAGA
FY433724       --> CAGTGATCTTCAAAATCTTCCCATCTCCAAGCGACGCTTCCTCAACGAGA

               801    -    851
UN17021        --> TCAGCAAAACCAAGCTTCTCAGCCCTAAAATGCTCAATGTTAGAAATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- TCAGCAAAACCAAGCTTCTCAGCCCTAAAATGCTCAATGTTAGAGATCGG
FD541004       <-- TCAGCATAACCAAGCTTCTCAGCCCTAAAATGCTCAATGTTAGAAATCGG
EX888028       <-- TCAGCAAAACCAAGCTTCTCCGCCCTAAAATGCTCAATGTTAGAAATCGG
FD989744       <-- TCAGCAAAACCAAGCTTCTCAGCCCTAAAATGCTCAATGTTAGAAATCGG
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> TCAGCAA...........................................
FY433724       --> TCAGCAAAACCAAGCTTCTCAGCCCTAAAATGCTCAATGTTAGAAATCGG

               851    -    901
UN17021        --> CAAGCAGTTCAACGTCTTCGTCACGAACTCAATCTCATCCCTCTCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- CAAGCAGTTCAACGTCTTCGTCACGAACTCAATCTCATCCCTCTCCACAT
FD541004       <-- CAAGCAGTTCAACGTCTTAGTCACGAACTAAATCTCATCCCTCTCCACAT
EX888028       <-- CAAGCAGTTCAACGTCTTCGTCACGAACTCAATCTCATCCCTCTCCACAT
FD989744       <-- CAAGCAGTTCAACGTCTTCGTCACGAACTCAATCTCATCCCTCTCCACAT
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> CAAGCAGTTCAACGTCTTCGTCACGAACTCAATCTCATCCCTCTCCACAT

               901    -    951
UN17021        --> CCTTAATCACCATGATCTTCGCCTTAGCCAAATAGTGAAGCGACAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- CCTTAATCGCCATGATCTTCGCC...........................
FD541004       <-- CCTTAATCACCATGATCTTAGCCTTAGCCAAATAGTGAAGCGACAGATCA
EX888028       <-- CCTTAATCACCATGATCTTCGCCTTAGCCAAATAGTGAAGCGACAGATCA
FD989744       <-- CCTTAATCACCATGATCTTAGCCTTAGCCAAATAGTGAAGAGACAAATCA
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> CCTTAATCACCATGATCTTCGCCTTTCGCAAATAGTGAAGAGACAGATCA

               951    -   1001
UN17021        --> GTCACAGCATCTCTCAAAATACTCTTCTGGATCAACAACACATTACAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- GTCACAGCGTCCCTCAAAATACTCTTCTGGATCAACAACACATTACAACC
EX888028       <-- GTCACGGCATCTCTCAAAATACTCTTCTGGATCAGCAACACATTGCAACC
FD989744       <-- GTCACAGCATCTCTCAAAATACTCTTCTGGATCAACAACACATTACAACC
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> GTCACAGCATCCCTCAAA-TACTCTTCTGGATCAACA-CACATTACAACC

               1001   -   1051
UN17021        --> AGTCGCCTTGATCTTCTTAATCATCCCCAAGATGTAGTTCCTCTCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- AGTCGCCTTGATCTTCTTAATCATCCCCAAGATGTAGTTCCTCTCTTCCT
EX888028       <-- AGTCGCCTTGATCTTCTTAATCATCCCCAAGATGTAGTTCCTCTCTTCCT
FD989744       <-- AGTCGCCTTGATCTTCTTAATCATCCCCAAGATGTAGTTCCTCTCTTCCT
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> AGTCGCCTTGATCTTCTTAATCATCCC.......................

               1051   -   1101
UN17021        --> TCAAGATCCTATCCATCTGAGTATAATCAGAGACAACAATACTCTGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- TCAAGATCCTATCCATCTGAGTATAATCAGAGACAACAATACTCTGCTCG
EX888028       <-- TCAAGATCCTATCCATCTGAGTATAATCAGAGACAACAATACTCTGCTCG
FD989744       <-- TCAAGATCCTATCCATCTGAGTATAATCAGAGACAACAATACTCTGCTCG
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1101   -   1151
UN17021        --> ATATCAGTCTTGGGAGGCGAGATCTGGAACTGAATCACAGCGATCTTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ATATCAGTCTTGGGAGGCGAGATCTGGAACTGAATCACAGCGATCTTCGC
EX888028       <-- ATATCAGTCTTGGGAGGCGAGATCTGGAACTGAATCACAGCGATCTTCGC
FD989744       <-- ATATCAGTCTTGGGAGGCGAGATCTGGAACTGAATCACAGCGATCTTAGC
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1151   -   1201
UN17021        --> ATTCTCCATCCTCGTAGGTCCACCTGCAGCGTGGCTAACCTTCTTTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ATTCTCCATCCTCGTAGGTCCACCAGCAGCGTGGCTc.............
EX888028       <-- ATTCTCCATCCTCGTAGGTCCACCc.........................
FD989744       <-- ATTCTCCATCCTCGTAGGTCCACCTGCAGCGTGGCTAACCTTCTTTCCGT
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1201   -   1251
UN17021        --> TTGTTGTCTACGAAGGATTCGGTTTTGGATGCGCGAGGCCTCGATGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- TTGTTGTCTACGAAGGATTCGGTTTTGGATGCGCGAGGCCTCGATGCCAT
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1251   -   1301
UN17021        --> GGGTACCGTCGCCATTATAGAGTACGGAGGAGAGAGCTCAGATTTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- GGGTACCGTCGCCATTATAGAGTACGGAGGAGAGAGCTCAGATTTGATTT
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1301   -   1351
UN17021        --> GATCTCTGAAGGGAAAATGAGTTAGATCGGAGTTTACAGTGGAAAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563016       <-- ..................................................
EX771747       <-- ..................................................
FD987296       <-- ..................................................
FD549856       <-- ..................................................
FD541004       <-- ..................................................
EX888028       <-- ..................................................
FD989744       <-- GATCTCTGAAGGGAAAATGAGTTAGATCGGAGTTTACAGTGGAAAAGAGA
FD566765       --> ..................................................
EY943325       --> ..................................................
FD983371       --> ..................................................
FD574841       --> ..................................................
FD985491       --> ..................................................
FY433724       --> ..................................................

               1351   -   1401
UN17021        --> CGCTCTAGGGTTTACCC
                   ~~~~~~~~~~~~~~~~~
FD563016       <-- .................
EX771747       <-- .................
FD987296       <-- .................
FD549856       <-- .................
FD541004       <-- .................
EX888028       <-- .................
FD989744       <-- CGCTCTAGGGTTTACCC
FD566765       --> .................
EY943325       --> .................
FD983371       --> .................
FD574841       --> .................
FD985491       --> .................
FY433724       --> .................