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Alignment for radish unigene UN17036

               1      -     51
UN17036        --> ATATAAATAAGCAAACCTTGTATTACATT---TTCAGTTTCTACAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ATATAAATAAGCAAACTTTGTATTACATT---TTCAGTTTCTACAAGCAT
FD947821       <-- ..................................................
FD562164       <-- ..................................................
EX896820       <-- ..................................................
EV543123       --> ATATAAATAAGCAAACCTTGTATTACATT---TTCAGTTTCTACAAGCAT
FD538590       --> ..ATAAATAAGCAAACCTTGTATTACATT---TTCAGTTTCTACAAGCAT
FD566133       --> ..gTAAGTAAGCAAACCTTGTAT-ACATTAACTTGAGTTCCTCCAAGCAT
FD575984       --> ........................................CTACAAGCAT
FD943693       --> ..................................................
EX900691       --> ..................................................

               51     -    101
UN17036        --> TTTGTACATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TTTGTACATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
FD947821       <-- ..................................................
FD562164       <-- ..................................................
EX896820       <-- ..................................................
EV543123       --> TTTGTACATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
FD538590       --> TTTGTACATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
FD566133       --> TTTGTACATTAGCAAATGGATAATCTGTAATTACGCAATGAAGAGGGAAA
FD575984       --> TTTGTACATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
FD943693       --> ......CATTAGCAAATGGATAATCTGTAATTACACAATGAAGAGGGAAA
EX900691       --> ...........................................AGGGAAA

               101    -    151
UN17036        --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
FD947821       <-- ..................................................
FD562164       <-- ..................................................
EX896820       <-- ..................................................
EV543123       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
FD538590       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
FD566133       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
FD575984       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
FD943693       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA
EX900691       --> TGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAA

               151    -    201
UN17036        --> TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC
FD947821       <-- ..........................ACAAATGCAAAGAGGGAT-AGAGC
FD562164       <-- ..................................................
EX896820       <-- ..................................................
EV543123       --> TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC
FD538590       --> TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC
FD566133       --> TATTTTGGGAACTGGTACTAATACAAACAAATGCAAAGAGGGATTAGAGC
FD575984       --> TGTTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC
FD943693       --> TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAAAGC
EX900691       --> TATTTTGGGAACTGGTACTAATATAAACAAATGCAAAGAGGGATTAGAGC

               201    -    251
UN17036        --> TTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGGGATT
FD947821       <-- TTTA-GCACTGA-TCAACGGTGAAGAGAGCTCCAAGGACCAGG-GGGAT-
FD562164       <-- ..................................................
EX896820       <-- ..................................................
EV543123       --> TTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGGGATT
FD538590       --> TTTAAGCACTGAATCCACGGTGAAAAGAGCTCCAAGGACCAGGTGGGATT
FD566133       --> TTTAAGCACTGAATCCACGGTGAAAAGAGCTCCAAGGACCAGGTGGGATT
FD575984       --> TTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGG-ATT
FD943693       --> TTTAAGCACTGAATCAACGGTGAAAAGAGCTCCAAGGACCAGGTGGGATT
EX900691       --> TTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGGGATT

               251    -    301
UN17036        --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCC
FD947821       <-- GA-GTGCAAGC-TGTGAAGCTGC-TC-TCCATTTGCTCCATT-GGATCCT
FD562164       <-- .............................................ATCCT
EX896820       <-- ..................................................
EV543123       --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCC
FD538590       --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCC
FD566133       --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCT
FD575984       --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCT
FD943693       --> GAGGTGCAAGCCTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCT
EX900691       --> GAGGTGCAAGACTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCT

               301    -    351
UN17036        --> TTCGTTGCAGATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TGCGTTGCAGATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
FD947821       <-- TTCGTTGCAGATGTT-GCAAAGGAC-TCATGTGCTTGATACCGTACTGTG
FD562164       <-- TTCGTTGCAGATGTTTGCAAAGGAC-TCATGTGCTTGATACCGTACTGTG
EX896820       <-- ..................................................
EV543123       --> TGCGTTGCAGATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
FD538590       --> TGCGTTGCAAATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
FD566133       --> TTCGTTGCAAATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
FD575984       --> TTCGTCGCAAATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
FD943693       --> TTCGTTGCAAATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG
EX900691       --> TTCGTTGCAGATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACTGTG

               351    -    401
UN17036        --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAA
FD947821       <-- ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
FD562164       <-- ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
EX896820       <-- ..................................................
EV543123       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAA
FD538590       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAA
FD566133       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
FD575984       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
FD943693       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG
EX900691       --> ACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAG

               401    -    451
UN17036        --> CTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- CTCCAGTCATCGGCGAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947821       <-- CTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus sativus cv Early Scarlet Globe
FD562164       <-- CTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus sativus var. oleiformis
EX896820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543123       --> CTCCAGTCATCGGCGAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538590       --> CTCCAGTCATCGGCGAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566133       --> CTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus sativus var. oleiformis
FD575984       --> CTCCGGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus sativus cv Early Scarlet Globe
FD943693       --> CTCCA.............................................  Raphanus sativus cv Early Scarlet Globe
EX900691       --> CTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGACGTACTTTGTTTAGCAC  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN17036        --> TTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
FD947821       <-- TTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
FD562164       <-- TTCAGA-CCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
EX896820       <-- .............GAGATGCCAAACAAGAGTTTGC-GACGAGTTTCACAC
EV543123       --> TTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
FD538590       --> TTCAAAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACA.
FD566133       --> TT................................................
FD575984       --> TTCAAAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC
FD943693       --> ..................................................
EX900691       --> TTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACAC

               501    -    551
UN17036        --> TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- TGTTGTCAACATGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
FD947821       <-- TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
FD562164       <-- TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
EX896820       <-- TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
EV543123       --> TGTTGTCAACATGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA
FD943693       --> ..................................................
EX900691       --> TGTTGTCAACGTGAAGTCTGTGAGACATGGCTTCAAGGACTTGCTTCTGA

               551    -    601
UN17036        --> GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
FD947821       <-- GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
FD562164       <-- GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
EX896820       <-- GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
EV543123       --> GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTACGGTACTTATCCCA
FD943693       --> ..................................................
EX900691       --> GCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCA

               601    -    651
UN17036        --> GAAATGGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- GAAATGGACAAGATCTGCATCACGCTGGTTTGTGACTCTTGAAGGTGGTG
FD947821       <-- GAAATGGACAAGATCTGTATCACGCTGGTTTGTAACTCTTGAAGGTGGTG
FD562164       <-- GAAATGGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTG
EX896820       <-- GAAATGGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTG
EV543123       --> GAAATGGACAAGATCTGCATCACGCTGGTTTGTGACTCTTGAAGGTGGTG
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> GAAATGGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTG
FD943693       --> ..................................................
EX900691       --> GAAATGGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTG

               651    -    701
UN17036        --> GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCATTGGCAGGGTTC
FD947821       <-- GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT
FD562164       <-- GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT
EX896820       <-- GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT
EV543123       --> GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCATTGGCAGGGTTC
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT
FD943693       --> ..................................................
EX900691       --> GCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTGGCAGGGTTT

               701    -    751
UN17036        --> GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- GTTCCCATGTAAATGTCGAGCTTATTCTTc....................
FD947821       <-- GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA
FD562164       <-- GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA
EX896820       <-- GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA
EV543123       --> GTTCCCATGTAAATGTCGAGCTTATTCTTc....................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA
FD943693       --> ..................................................
EX900691       --> GTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTA

               751    -    801
UN17036        --> TTGCATGACATGAGAACCATAACTCGACCCAGAACCTACAGTCCTCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- TTGCATGACATGAGAACCATAACTCGACCCAGAACCTACAGTCCTCCTTT
FD562164       <-- TTGCATGACATGAGAACCATAACTCGACACAGAACCTACAGTCCTCCTTT
EX896820       <-- TTGCATGACATGAGAACCATAACTCGACCCAGAACCTACAGTCCTCCTTT
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> TTGCATGACATGAGAACCATAACTCGAC......................
FD943693       --> ..................................................
EX900691       --> TTGCATGACATGAGAACCATAACTCGACCCAGAACCTACAGTCCTCCTTT

               801    -    851
UN17036        --> TCACAAGTTCATATTGTTGGCGCAGAGTCTCAGTTTGTAGATTGTGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- TCACAAGTTCATATTGTTGGCGCAGAGTCTCAGTTTGTAGATTGTGCACG
FD562164       <-- TCACAAGTTCATGTTGTTGCCGCAGAGTCTCAGTTTGTAGATTGTGCACG
EX896820       <-- TCACAAGTTCATATTGTTGGCGCAGAGTCTCAGTTTGTAGATTGTGCACG
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> TCACAAGTTCATATTGTTGGCGCAGAGTCTCAGTTTGTAGATTGTGCACG

               851    -    901
UN17036        --> CCACTGTCTTCCATCCAGGCAACACTGTATAAGTCACCTAAGCAAGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- CCACTGTCTTCCATCCAGGCAACACTGTATAAGTCACCTAAGCAAGTTTC
FD562164       <-- CCACTGTCTTCCATCCAGGCAACACTGTATAAGTCACCTAAGCAAGTTTC
EX896820       <-- CCACTGTCTTCCATCCAGGCAACACTGTATAAGTCACCTAAGCAAGTTTC
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> CCACTGTCTTCCATCCAGGCA-CACTGTATAA..................

               901    -    951
UN17036        --> ATACTCAGGTGGAGGGCTAGGCTCCTCTCCGGGGCAATAGGTACCCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- ATACTCAGGTGGAGGGCTAGGCTCCTCTCCGGGGCAATAGGTACCCCAAC
FD562164       <-- ATACTCAGGTGGAGGGCTAGGCTCCTCTCCGGGGCAATAGGTACCCCAAC
EX896820       <-- ATACTCAGGTGGAGGGCTAGGCTCCTCTCCGGGGCAATAGGTACCCCAAC
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> ..................................................

               951    -   1001
UN17036        --> TGCTTTCTACTGCGTTCGATGCAGTTGTGGCGTAGATGTTTAAACCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- TGCTTTCTACTGCGTTCGATGCAGTTGTGGCGTAGATGTTTAAACCCTCT
FD562164       <-- TGCTTTCTACTGCGTTCGATGCAGTTGTGGCGc.................
EX896820       <-- TGCTTTCTACTGCGTTCGATGCAGTTGTGGCGTAGATGTTTAAACCCTCT
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> ..................................................

               1001   -   1051
UN17036        --> TCAAGAAGCCCTTCGAAGATACTTCCAGATTCACAAGCTTCAAGATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- TCAAGAAGCCCTTCAAAGAc..............................
FD562164       <-- ..................................................
EX896820       <-- TCAAGAAGCCCTTCGAAGATACTTCCAGATTCACAAGCTTCAAGATAAAA
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> ..................................................

               1051   -   1101
UN17036        --> CACCAAACTTTTGTAGTTTCCGGAAGAGTGTTTTTTCTTCAACACATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- ..................................................
FD562164       <-- ..................................................
EX896820       <-- CACCAAACTTTTGTAGTTTCCGGAAGAGTGTTTTTTCTTCAACACATCAT
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> ..................................................

               1101   -   1151
UN17036        --> TCAAATCATTAGCATATAAGTAAGGAGAAGTCGGCATCCCGAGAACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- ..................................................
FD947821       <-- ..................................................
FD562164       <-- ..................................................
EX896820       <-- TCAAATCATTAGCATATAAGTAAGGAGAAGTCGGCATCCCGAGAACTCCA
EV543123       --> ..................................................
FD538590       --> ..................................................
FD566133       --> ..................................................
FD575984       --> ..................................................
FD943693       --> ..................................................
EX900691       --> ..................................................

               1151   -   1201
UN17036        --> GGACCACCATGGTCACTGTAGAATATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV539301       <-- .............................
FD947821       <-- .............................
FD562164       <-- .............................
EX896820       <-- GGACCACCATGGTCACTGTAGAATATGAA
EV543123       --> .............................
FD538590       --> .............................
FD566133       --> .............................
FD575984       --> .............................
FD943693       --> .............................
EX900691       --> .............................