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Alignment for radish unigene UN17043

               1      -     51
UN17043        --> GTGGCAACGTTTTTAAGCAAACCGTTCGAATGTTTGTGTCAGCAACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- ..................................................
EV568502       <-- ..................................................
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> GTGGCAACGTTTTTAAGCAAACCGTTCGAATGTTTGTGTCAGCAACAATA
EV573214       --> ..............AAGCAAACCGTTCGAATGTTTGTGTCAGCAACAATA
FD945297       --> ..........................gGAATGTTTGTGTCAGCAACAATA
FD544989       --> ..................................................
EV573010       --> ..................................................

               51     -    101
UN17043        --> AACATGGTGCATTACATACAAAGTCATGTAGCATTTAACAGTTGGGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- ..................................................
EV568502       <-- ..................................................
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> AACATGGTGCATTACATACAAAGTCATGTAGCATTTAACAGTTCGGATAA
EV573214       --> AACATGGTGCATTACATACAAAGTCATGTAGCATTTAACAGTTCGGATAA
FD945297       --> AACATGGTGCATTACATACAAAGTCATGTAGCATTTAACAGTTGGGATAA
FD544989       --> .............gCATACAAAGTCATGTAGCATTTAACAGTTGGGATAA
EV573010       --> ..................................................

               101    -    151
UN17043        --> TATGTCGAAATGTCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- ..................................................
EV568502       <-- ..................................................
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> TATGTCGAAATGTCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCA
EV573214       --> TATGTCGAAATGTCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCA
FD945297       --> TATGTCGAAATGCCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCA
FD544989       --> TATGTCGAAATGTCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCA
EV573010       --> ..................................................

               151    -    201
UN17043        --> AAGCAGAGACAAGCAGCAATGCAAAAATCTGTGAGGTAAAGCTGGTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- ..................................................
EV568502       <-- ..................................................
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> AAGCAGAGACAAGCAGCAATGCAAAAATCTGTGAGGTAAGGCTGGTTGAT
EV573214       --> AAGCAAAAACGAGCAGCAATGCAAAAATCTGTGAGGCAAAGCTGGTTGAT
FD945297       --> AAGCAGAGACAAGCAGCAATGCAAAAATCTGTGAGGTAAAGCTGGTTGAT
FD544989       --> AAGCAGAAACAAGCAGCAATGCAAAAATCTGTGAGGTAAAGCTGGTTGAT
EV573010       --> ...........AGCAGCAATGCAAAAATCTGTGAGGCAAAGCTGGTTGAT

               201    -    251
UN17043        --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- .................................................T
EV568502       <-- .................................................T
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT
EV573214       --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT
FD945297       --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT
FD544989       --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT
EV573010       --> CAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTAT

               251    -    301
UN17043        --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
EV568502       <-- GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
EV573214       --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
FD945297       --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
FD544989       --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC
EV573010       --> GCTCTCTTGGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGC

               301    -    351
UN17043        --> TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
EV568502       <-- TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
FD548859       <-- ..................................................
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAGTTTGGTAGTGGTGAAA
EV573214       --> TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
FD945297       --> TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
FD544989       --> TGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTGGTGAAA
EV573010       --> TGAGCATTCCTTTTTTAATCAAAACGTTCTCCAATTTGGTAGTGGTGAAA

               351    -    401
UN17043        --> TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
EV568502       <-- TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
FD548859       <-- .........GTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
EX773789       <-- ..................................................
FD949681       <-- ..................................................
EX777607       --> TCGTCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCTAT
EV573214       --> TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
FD945297       --> TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
FD544989       --> TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT
EV573010       --> TCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAAT

               401    -    451
UN17043        --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGCTTCG
EV568502       <-- TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGCTTCG
FD548859       <-- TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGTTTCG
EX773789       <-- .....................................ATTGCTAGTTTCG
FD949681       <-- .....................................ATTGCTAGTTTCG
EX777607       --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGCCTTTATTGCTAGTTTCG
EV573214       --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGCTTCG
FD945297       --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGTTTCG
FD544989       --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGTTTCG
EV573010       --> TCCCTTGCTGAAAAGCAAAACGCAAGGCAAGGTCTTTATTGCTAGCTTCG

               451    -    501
UN17043        --> TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
EV568502       <-- TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
FD548859       <-- TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
EX773789       <-- TGACAAAGAAAGGAGCATTCTCGGCGTCAACTCTAATGAATTTAGTGTCC
FD949681       <-- TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
EX777607       --> TGACAAAGAAAGGAGCATTCTCGGCGTCAACTCTAATGAATTTAGTGTCC
EV573214       --> TGACAAAAAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
FD945297       --> TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
FD544989       --> TGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC
EV573010       --> TGACAAAAAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCC

               501    -    551
UN17043        --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
EV568502       <-- ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
FD548859       <-- ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
EX773789       <-- ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
FD949681       <-- ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
EX777607       --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
EV573214       --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
FD945297       --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
FD544989       --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG
EV573010       --> ACATGTCTAGGGGCAAGAGTCTTCAGATGCTTGTCCATAATCTTGCAGCG

               551    -    601
UN17043        --> GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra
EV568502       <-- GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra
FD548859       <-- GTAAAACTCCTTGTGGTAGAAATGACAAATAACATTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773789       <-- GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra
FD949681       <-- GTAAAACTCCTTGTGGTAGAAATGACAAATAACATTGGGACTCGTGGTGA  Raphanus sativus cv Early Scarlet Globe
EX777607       --> GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra
EV573214       --> GTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra
FD945297       --> GTAAAACTCCTTGTGGTAGAAATGACAAATAACATTGGGACTCGTGGTGA  Raphanus sativus cv Early Scarlet Globe
FD544989       --> GTAAAACTCCTTGTGGTAGAAATGACAAATAACATTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573010       --> GTAAAACTCCTTGTGGTAAAAATGACAAATAACTTTGGGACTCGTGGTGA  Raphanus raphanistrum subsp. landra

               601    -    651
UN17043        --> CTTCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- CTTCCCCAAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGACCT
EV568502       <-- CTTCCCCAAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGACCT
FD548859       <-- CTTCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCT
EX773789       <-- CTTCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCT
FD949681       <-- CTTCCCCCAAGAAATCACCCTCGGTTACCTCTTGATATTCACCATGTCCT
EX777607       --> CTTCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCT
EV573214       --> CTTCCCCAAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGACCT
FD945297       --> CTTCCCCCAAGAAATCACCCTCGGTTACCTCTTGATATTCACCATGTCCT
FD544989       --> CTTCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCT
EV573010       --> CTTCCCCAAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGACCT

               651    -    701
UN17043        --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
EV568502       <-- TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
FD548859       <-- TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
EX773789       <-- TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCGGCAAT
FD949681       <-- TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCCCTTGAGTGCAGCAAT
EX777607       --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCGGCAAT
EV573214       --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
FD945297       --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCCCTTGAGTGCAGCAAT
FD544989       --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT
EV573010       --> TGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTTGAGTGCAGCAAT

               701    -    751
UN17043        --> CCTATCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- CCTGTCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
EV568502       <-- CCTGTCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
FD548859       <-- CCTATCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
EX773789       <-- CCTATCAGCGTGCAATTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
FD949681       <-- CCTATCAGCGTGCAACTTTTCTAGCTTTGGATCATCCATGAGATCATCAA
EX777607       --> CCTATCAGCGTGCAATTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
EV573214       --> CCTGTCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
FD945297       --> CCTATCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
FD544989       --> CCTATCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA
EV573010       --> CCTGTCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAA

               751    -    801
UN17043        --> GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
EV568502       <-- GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
FD548859       <-- GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
EX773789       <-- GATCAACCTCCTCATTCACATGATTCGATGATTGCGTCTTCTCATTTGCA
FD949681       <-- GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
EX777607       --> GATCAACCTCCTCATTCACATGATTCGATGATTGCGTCTTCTCATTTGC.
EV573214       --> GATCAA............................................
FD945297       --> GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA
FD544989       --> GATCAACCTCCTCATTCAC...............................
EV573010       --> GATCAACCTCCTCATTCACATGATTCGATGATTGCGCCTTCTCATTTGCA

               801    -    851
UN17043        --> AGAACTTCCTTTTTGTAATCTCTGGCAGCTGCAGCCAATACGTTTCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- AGAACTTCCTTTTTGTAATCTCTGGCAGCTGCAGCCAATACGTTTCCGAA  Raphanus raphanistrum subsp. landra
EV568502       <-- AGAACTTCCTTTTTGTAATCTCTGGCAGCTGCAGCCAATACGTTTCCGAA  Raphanus raphanistrum subsp. landra
FD548859       <-- AGAACTTCCTTTTTGTAATCTCTAGCAGCTGCAGCCAATACGTTTCCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773789       <-- AGAACTTCCTTTTTGTAATCTCTGGCAGCTGCAGCCAATACGTTTCCGAA  Raphanus raphanistrum subsp. landra
FD949681       <-- AGAACTTCCTTTTTGTAATCTCTAGCAGCTGCAGCCAATACGTTTCCGAA  Raphanus sativus cv Early Scarlet Globe
EX777607       --> ..................................................  Raphanus raphanistrum subsp. landra
EV573214       --> ..................................................  Raphanus raphanistrum subsp. landra
FD945297       --> AGAACTTCCTTTT-GTAATCTCTAGCAGCTGCAGCCAATACGTTTCC...  Raphanus sativus cv Early Scarlet Globe
FD544989       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573010       --> AGAACTTCCTTTTTGTAATCTC............................  Raphanus raphanistrum subsp. landra

               851    -    901
UN17043        --> GGCCAGATTCGAGAGGGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- GGCCAGATTCGAGAGGGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
EV568502       <-- GGCCAGATTCGAGAGGGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
FD548859       <-- GGCCAGACTCGAGAGTGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
EX773789       <-- GGCCAGATTCGAGAGGGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
FD949681       <-- GGCCAGATTCGAGAGTGTCGACTTTACTGCATCCGGATCCATCTTTAGTG
EX777607       --> ..................................................
EV573214       --> ..................................................
FD945297       --> ..................................................
FD544989       --> ..................................................
EV573010       --> ..................................................

               901    -    951
UN17043        --> CCCCCTC-----AAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- CCCCCTC-----AAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACCG
EV568502       <-- CCCCCTC-----AAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACCG
FD548859       <-- CCCCCCC-CCCAAAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACTG
EX773789       <-- CCCCCTC-----AAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACCG
FD949681       <-- CCCCCCCCCCCAAAAAAGATATCTAAGCTCCTCCGAGATTTTTCTTACTG
EX777607       --> ..................................................
EV573214       --> ..................................................
FD945297       --> ..................................................
FD544989       --> ..................................................
EV573010       --> ..................................................

               951    -   1001
UN17043        --> GTG-ATAAATTATAAACAGAGTGAGCAATCCAAAATTGGAGTGTTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- GTG-ATAAATTATAAACAGAGTGAGCAATCCAAAATTGGAGTGTTTCTTA
EV568502       <-- GTG-ATAAATTATAAACAGAGTGAGCAATCCAAAATTGGAGTGTTTCTTA
FD548859       <-- GTTCATAAATTATAAACAGAGTGAGCAATCCGAAATTGGAGTGTTTCTTA
EX773789       <-- GTG-ATAAATTATAAACAGAGTGAGCAATCCAAAATTGGAGTGTTTCTTA
FD949681       <-- GTTCATAAATTATAAACAGAGTGAGCAATCCGAAATTGGAGTGTTTCTTA
EX777607       --> ..................................................
EV573214       --> ..................................................
FD945297       --> ..................................................
FD544989       --> ..................................................
EV573010       --> ..................................................

               1001   -   1051
UN17043        --> TTGCCTTCAATTTCAAATCTGAAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568236       <-- TTGCCTTCAATTT..............
EV568502       <-- TTGCCTTCAATTT..............
FD548859       <-- TTGCCTTCAATTTCAAATCTGAAGCCC
EX773789       <-- TTGCCTTCAATTT..............
FD949681       <-- TTGCCTTCAATTTCAAATCTGAAGCC.
EX777607       --> ...........................
EV573214       --> ...........................
FD945297       --> ...........................
FD544989       --> ...........................
EV573010       --> ...........................