1      -     51
UN17059        --> GGGTAGTCAGATTAGTCACTCTTCGAAACAAAAAAAAATCCCCAAATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> GGGTAGTCAGATTAGTCACTCTTCGAAACAAAAAAAAATCCCCAAATTTC
FD979028       --> GGGTAGTCAGATTAGTCACTCTTCGAAACAAAAAAAAATCCCCAAATTTC
FD981000       --> GGGTAGTCAGATTAGTCACTCTTCGAAACAAAAAAAAATCCCCAAATTTC
FD980331       --> ...........ggAGTCACTCTTCGAAACAAAAAAAAATCCCCAAATTTC
EV570384       --> ........gggtaggaagattagtcactcttcgAAAAATCCCCAAATTTC
EY924948       --> ........gggtaggaagattagtcactcttcgAAAAATCCCCAAATTTC
FD556369       --> ..........ggaggaagattagtcactcttcgAAAAATCCCCAAATTTC
FD938845       --> .....ggactgtagtcagattagtcactcttcgAAAAATCCCCAAATTTC
FD972468       --> ...........tagtcagattagtcactcttcgAAAAATCCCCAAATTTC
EY904962       --> ..................................................

               51     -    101
UN17059        --> GGAA-GGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> GGAAAGGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979028       --> GGAAAGGGTAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981000       --> GGAAAGGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980331       --> GGAAAGGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAAC-TGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570384       --> GGAA-GGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGGACAAGA  Raphanus raphanistrum subsp. landra
EY924948       --> GGAA-GGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGGACAAGA  Raphanus raphanistrum subsp. landra
FD556369       --> GGAA-GGATAAGCCTCGCCGGCGACGAAATTAGGGTTTCGTTGGACAAGA  Raphanus raphanistrum subsp. landra
FD938845       --> GGAA-GGATAAGCCTCGCCGGTGACGAAATTAGGGTTCCACTGAACAAGA  Raphanus sativus var. oleiformis
FD972468       --> GGAA-GGATAAGCCTCGCCGGTGACGAAATTAGGGTTTCGTTGAACGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN17059        --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
FD979028       --> AGATGGCTCACGCTTGTGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
FD981000       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
FD980331       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
EV570384       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
EY924948       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
FD556369       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTTCTTCTCTCAGGTTTACA
FD938845       --> AGATGGCTCACGCTTGCGTCTCCACGTCGGCTTCTTCTCTCAGGTTTGCA
FD972468       --> AGATGGCTCACGCTTGCGTCTCCACATCGGCTACGTCTCTCAGGTTTACA
EY904962       --> ..................................................

               151    -    201
UN17059        --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
FD979028       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
FD981000       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
FD980331       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
EV570384       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
EY924948       --> GCTGGATTCGTCTCCGCGAGTCCCAACTCCTCCTCTTTCGATTCTCAGAA
FD556369       --> GCTGGATTCGTCTCCGCGGGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
FD938845       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
FD972468       --> GCTGGATTCGTCTCCGCGAGTCCCAACGCCTCCTCTTTCGATTCTCAGAA
EY904962       --> ..................................................

               201    -    251
UN17059        --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
FD979028       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
FD981000       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
FD980331       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
EV570384       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
EY924948       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAGAAGTTAG
FD556369       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGAAAGACGAAAAAGTTAG
FD938845       --> GCTTTCTCTCCCTTTCGAGCCCCTTCGTTCAAGGAAGACGAAGAAGTTAG
FD972468       --> GCTTTCTCTTCCTTTCGAGCCCCTTCGTTCGAGGAAGACGAAGAAGTTAG
EY904962       --> ..................................................

               251    -    301
UN17059        --> TTAGCGAGAGAAAGAATTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> TTAGCGAGAGAAAGAAGTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979028       --> TTAGCGAGAGAAAGAAGTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981000       --> TTAGCGAGAGAAAGAAGTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980331       --> TTAGCGAGAGAAAGAAGTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570384       --> TTAGCGAGAGAAAGAATTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. landra
EY924948       --> TTAGCGAGAGAAAGAATTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. landra
FD556369       --> TTAGCGAGAGAAAGAATTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. landra
FD938845       --> TTAGCGAGAGAAAGAATTGGAGGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus sativus var. oleiformis
FD972468       --> TTAGCGAGAGAAAGAATTGGAAGAGCTCATCAACTCCGAAGGCTGTATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN17059        --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> TCCGGCAATCTCTGGACACTGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
FD979028       --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
FD981000       --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
FD980331       --> TCCGGCAATCTCTGGACACCGGATACTCCTTCGCCGCAAGGAGTTTGGTC
EV570384       --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
EY924948       --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
FD556369       --> TCCGGCAATCTCTGGACACCTGAGACTCCTTCGCCGCAAGGAGTTTTGTC
FD938845       --> TCCGGCAATCTCTGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
FD972468       --> TCCGGAAATGTATGGACACCGGAGACTCCTTCGCCGCAAGGAGTTTGGTC
EY904962       --> ..................................................

               351    -    401
UN17059        --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979028       --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981000       --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980331       --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570384       --> CATCAGAGATGATTTACAAGTGCCATCTTTGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. landra
EY924948       --> CATCAGAGATGATTTACAAGTGCCATCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. landra
FD556369       --> CATCAGAGATGATTTACAAGTGCCATCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. landra
FD938845       --> CATCAGAGATGATTTACAAGTGCCATCTTCGCCTTACTTTCCTGTGTACG  Raphanus sativus var. oleiformis
FD972468       --> CATCAGAGATGATTTACAAGTGCCTTCTTCGCCTTACTTTCCTGTGTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904962       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN17059        --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
FD979028       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
FD981000       --> CACAAGGACAAGGACCACCTCCTATGGTGTAGGAGCGTTTCCAGAGTATC
FD980331       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
EV570384       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
EY924948       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
FD556369       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
FD938845       --> CACAAGGACAAGGACCACCTCCTATGGTGCAGGAGCGTTTCCAGAGTATC
FD972468       --> CTCAAGGACAAGGACCACCTCCTATGGTGCAAGAGCGTTTCCAGAGTATC
EY904962       --> ................................GAGGGTTTCCAGAGTATC

               451    -    501
UN17059        --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
FD979028       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCCGTGGTGGTGCTGTGGA
FD981000       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
FD980331       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
EV570384       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
EY924948       --> ATAAGCCAGCTCTTCCAGTATAGGATTATTCGCTGTGGTGGTGCTGTGGA
FD556369       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
FD938845       --> ATAAGCCAGCTCTTCCAATATAGGATTATCCGCTGTGGTGGTGCTGTGGA
FD972468       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA
EY904962       --> ATAAGCCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGA

               501    -    551
UN17059        --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
FD979028       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
FD981000       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
FD980331       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
EV570384       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
EY924948       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
FD556369       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
FD938845       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTGTACCTTGATGCT-
FD972468       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG
EY904962       --> TGATGATATGGCCAACATAATCGTGGCTCAGCTTCTCTACCTTGATGCTG

               551    -    601
UN17059        --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCCCCTGG-TGGATC
FD979028       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
FD981000       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
FD980331       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
EV570384       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
EY924948       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
FD556369       --> TTGATCCCACTAAGGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
FD938845       --> -TGATCCCACTAAAGATATCGTCATGTATGTGAATTCTCCTGG-TGGATC
FD972468       --> TTGATCCCACTAAGGATATTGTCATGTATGTGAACTCTCCTGGGTGGATC
EY904962       --> TTGATCCCACTAACGATATTGTCATGTATGTGAACTCTCCTGG-TGGATC

               601    -    651
UN17059        --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
FD979028       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
FD981000       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
FD980331       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
EV570384       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
EY924948       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
FD556369       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAGGCATATCCGACCTG
FD938845       --> AGTTACAGCTGGCATGGCTATATTCGACACTATGAG-CATATCCGACCTG
FD972468       --> TGTTACAGCTGGTATGGCTATATTTGACACTATGAGGCATATCCGACCTG
EY904962       --> TGTTACAGCTGGTATGGCTATATTTGACACTATGAGGCATA.........

               651    -    701
UN17059        --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
FD979028       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
FD981000       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
FD980331       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTA
EV570384       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
EY924948       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
FD556369       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGTGCATTTCTG
FD938845       --> ATGTCTCCACTGTTTGT.................................
FD972468       --> ATGTCTCCACTGTTTGTGTCGGTCTAGCTGCTAGTATGGGAGCATTTCTG
EY904962       --> ..................................................

               701    -    751
UN17059        --> CTTAGTGCTGGAACCAAAGGGAAAAGATACAGTCTGCCAAACTCAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> CTTAGTGC..........................................
FD979028       --> CTTAGTGCTGGAACC...................................
FD981000       --> CTTAGTGCTGGAACC...................................
FD980331       --> CTTAGTGCTGGAACCAAAGGGAAAAGATACAGTCTGCCAAA.........
EV570384       --> CTTAGTGCTGGAACCAAAGGGAAAAGATACAGTCTGCCAAACTCAAGGAT
EY924948       --> CTTAGTGCTGGAACCAAAGGGAAA-GATACAGTCTGCCAAACTCAAG-AT
FD556369       --> CTTAGTGCTGGAACCAAAGGGAAAAGATACAGTCTGCCAAACTCAAGGAT
FD938845       --> ..................................................
FD972468       --> C.................................................
EY904962       --> ..................................................

               751    -    801
UN17059        --> AATGATCCATCAACCTCTTGGTGGAGCTCAAGTGGCCAAACCGATATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> ..................................................
FD979028       --> ..................................................
FD981000       --> ..................................................
FD980331       --> ..................................................
EV570384       --> AATGATCCATCAACCTCTTGGTGGAGCTCAAGTGGCCAAACCGATATCGA
EY924948       --> AATGATCCATCAACCTCTTGGTGGAGCTCAAGTG................
FD556369       --> AATGATCCGTCAACC...................................
FD938845       --> ..................................................
FD972468       --> ..................................................
EY904962       --> ..................................................

               801    -    851
UN17059        --> CATTCAGCAAATGAATGCTGCATCACAGCAAACCTAAACGTTACTCGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> ..................................................
FD979028       --> ..................................................
FD981000       --> ..................................................
FD980331       --> ..................................................
EV570384       --> CATTCAGCAAATGAATGCTGCATCACAGCAAACCTAAACGTTACTCGCTT
EY924948       --> ..................................................
FD556369       --> ..................................................
FD938845       --> ..................................................
FD972468       --> ..................................................
EY904962       --> ..................................................

               851    -    901
UN17059        --> ACAAACTGGTCAAGCCTTGAGAGATAACCAGACACAGACCGTGATTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD549649       --> ..................................................
FD979028       --> ..................................................
FD981000       --> ..................................................
FD980331       --> ..................................................
EV570384       --> ACAAACTGGTCAAGCCTTGAGAGATAACCAGACACAGACCGTGATTTCTT
EY924948       --> ..................................................
FD556369       --> ..................................................
FD938845       --> ..................................................
FD972468       --> ..................................................
EY904962       --> ..................................................

               901    -    951
UN17059        --> CATG
                   ~~~~
FD549649       --> ....
FD979028       --> ....
FD981000       --> ....
FD980331       --> ....
EV570384       --> CATG
EY924948       --> ....
FD556369       --> ....
FD938845       --> ....
FD972468       --> ....
EY904962       --> ....