RadishBase

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Alignment for radish unigene UN17085

               -2     -     48
UN17085        --> ...ATCCTCTTGTTTCTTTGGCTTGTGTCTGAGCTCGAACCTAAAGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> attATCCTCTTGTTTCTTTGGCTTGTGTCTGAGCTCGAACCTAAAGATAA
FY436082       --> ...ATCCTCTTGTTTCTTTGGCTTGTGTCTGAGCTCGAACCTAAAGATAA
FY437949       --> ..................................................
FY439298       --> ..................................................
EV551354       --> ..................................................
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               48     -     98
UN17085        --> GAATCCACCATCATGTCTTTAGCTCCGACCAGTTATCCATCTCTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> GAATCCACCATCATGTCTTTAGCTCCGACCAGTTATCCATCTCTCTCTTC
FY436082       --> GAATCCACCATCATGTCTTTAGCTCCGACCAGTTATCCATCTCTCTCTTC
FY437949       --> ...........................gaCAGTTATCCATCTCTCTCTTC
FY439298       --> ...............................GTTATCCATCTCTCTCTTC
EV551354       --> ...................................aggATCTCTCCATTC
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               98     -    148
UN17085        --> ACTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> ACTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
FY436082       --> ACTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
FY437949       --> -CTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
FY439298       --> -CTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
EV551354       --> ACTGCCAAGAACCAAGCAAAACCCTGCCTTGATCACTCAACCCAGTTTCA
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               148    -    198
UN17085        --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAATTCGTGCAATAGCCATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAATTCGTGCAATAGCCATGTG
FY436082       --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAATTCGTGCAATAGCCATGTG
FY437949       --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAATTCGTGCAATAGCCATGTG
FY439298       --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAATTCGTGCAATAGCCATGTG
EV551354       --> TTTCGGTGAAAAGTCTCTTCCTTTCGAGCAAT---------ACCCATGTG
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               198    -    248
UN17085        --> GCAAAACGGGGGAGTTTTGCTTTGAAAGCGTCGGAGACGGATTCAACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> GCAAAACGGGGGAGTTTTGCTTTGAAAGCGTCGGAGACGGATTCAACAGC
FY436082       --> GCAAAACGGGGGAGTTTTGCTTTGAAAGCGTCGGAGACGGATTCAACAGC
FY437949       --> GCAAAACGGGGGAGTTTTGCTTTGAAAGCGTCGGAGACGGATTCAACAGC
FY439298       --> GCAAAACGGGGGAGTTTTGCTTTGAAAGCGTCGGAGACGGATTCAACAGC
EV551354       --> GCAAAACGGGGGAGTTTCGCTTTGAAAGCGTCGGAGACAGATTCCACAGC
EW715677       --> ......................gGAAAGCGTCGGAGACAGATTCAACAGC
EY898665       --> ..........................................gCAACAGC
EV527681       --> ..................................................

               248    -    298
UN17085        --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
FY436082       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
FY437949       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
FY439298       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
EV551354       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAAAGAAGAAG
EW715677       --> CAAACCTGAAGCAGGAAAAGAGAAAGATGGTGGAGAAGGAAATGAGGAAG
EY898665       --> CAAACCTGAAGCAGGAAAAGAGAAAGAGGGTGGAGAAGGAAATGAAGAAG
EV527681       --> ..................................................

               298    -    348
UN17085        --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ...........TACGAAACGTATGAGATAGA-GTGGAGCAGC-TTATGGT
EW719383       <-- ..................................................
FD539046       <-- ..................................................
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
FY436082       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
FY437949       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
FY439298       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
EV551354       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
EW715677       --> AAGA---GAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
EY898665       --> AAGAAGAGAAGTACGAAACGTATGAGATAGAAGTGGAGCAGCCTTATGGT
EV527681       --> ..................................................

               348    -    398
UN17085        --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- -TGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
EW719383       <-- .....ATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
FD539046       <-- ................................TTACATTGATGCTATTT-
EV546465       <-- ..................................................
FD935297       <-- ..................................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- ..................................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
FY436082       --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
FY437949       --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
FY439298       --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
EV551354       --> TTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
EW715677       --> CTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
EY898665       --> TTGAAATTCAGGAAAGGAAGAGATGGTGGGACTTACATTGATGCTATTTT
EV527681       --> ..................................................

               398    -    448
UN17085        --> GCCCGGTGGTTTCGCCGATAAAACCGGCAAATTCACAGTCGGCGACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- GCCCGGTGGTTTCGCAGATAAA-CCAGAAAATTCACAGTCGGCGACAGAG  Raphanus raphanistrum subsp. maritimus
EW719383       <-- GCCTGGTGGTTTCGCCGATAAAACCGGCAAATTCACTGTCGGCGACAGAG  Raphanus sativus var. oleiformis
FD539046       <-- GCCCGGTGGTTTCGCCGATAAAACCGGCAAGTTCACAGTCGGCGACAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- ............CGCCGATAAAACCGGCAAATTCACTGTCGGCGACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- ................................TCACTGTCG-CGACAGAG  Raphanus sativus var. oleiformis
EY918494       <-- ............................................ACAGAG  Raphanus raphanistrum subsp. landra
EX774810       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD944568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW738267       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- ..................................................  Raphanus sativus var. oleiformis
FD937473       <-- ..................................................  Raphanus sativus var. oleiformis
EX900287       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY903680       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD959635       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD584119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> GCCCGGTGGTTTCGCCGACAAAACCGGCAAATTCACAGTCGGCGACAGAG  Raphanus sativus cv GSK3-1
FY436082       --> GCCCGGTGGTTTCGCCGACAAAACCGGCAAATTCACAGTCGGCGACAGAG  Raphanus sativus cv GSK3-1
FY437949       --> GCCCGGTGGTTTCGCCGACAAAACCGGCAAATTCACAGTCGGCGACAGAG  Raphanus sativus cv GSK3-1
FY439298       --> GCCCGGTGGTTTCGCCGACAAAACCGGCAAATTCACAGTCGGCGACAGAG  Raphanus sativus cv GSK3-1
EV551354       --> GCCCGGTGGTTTCGCCGATAAAACCGGCAAATTCACTGTCGGCGACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> GCCTGGTGGTTTCGCCGATAAAACCGGCAAATTCACTGTCGGCGACAGAG  Raphanus sativus var. oleiformis
EY898665       --> GCCCGGTGGTTTCGCAGATAAAACCGGAAAATTCACAGTCGGCGACAGAG  Raphanus raphanistrum subsp. maritimus
EV527681       --> ..........gTCGCAGATAAAACCGGAAAATTCACAGTCGGCGACAGAG  Raphanus raphanistrum subsp. maritimus

               448    -    498
UN17085        --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EW719383       <-- TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCC-GCAGCTGAG
FD539046       <-- TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EV546465       <-- TTATTGCCACTAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
FD935297       <-- T-ATTGCCACAAGTGCAGTGTT-GGGACAGAGATTTGGC-TGCAGCTGAG
EY918494       <-- TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EX774810       <-- ........ACAAGTGCAGTGTTTGG-ACAGAGATTTGGC-TGCAGCTGAG
FD944568       <-- ..........................ACAGAGATTTGGCCTGCAGCTGAG
EY894654       <-- ..........................................CAGCTGAG
EW738267       <-- ...........................................AGCTGAG
FD945368       <-- ...........................................AGCTGAG
FD945695       <-- ...........................................AGCTGAG
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- ..................................................
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
FY436082       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
FY437949       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
FY439298       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EV551354       --> TTATTGCCACTAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EW715677       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCC-GCAGCTGAG
EY898665       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG
EV527681       --> TTATTGCCACAAGTGCAGTGTTTGGGACAGAGATTTGGCCTGCAGCTGAG

               498    -    548
UN17085        --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus
EW719383       <-- TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus var. oleiformis
FD539046       <-- TACGGTAGTACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus var. oleiformis
EY918494       <-- TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. landra
EX774810       <-- TACGGTAGGGCTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. landra
FD944568       <-- TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- TACGGTAGGGCTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus
EW738267       <-- TACGGTAGGACTATGTACACCATCCGTCAGAGAGTTGGTCCTTTGCTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- .......................CCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus var. oleiformis
FD937473       <-- ............................AGAGGATTGGTCCTTTGCTTAT  Raphanus sativus var. oleiformis
EX900287       <-- .......................................CCTTTGCTTAT  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- ..............................................TTAT  Raphanus raphanistrum subsp. landra
EY903680       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD959635       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD584119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus sativus cv GSK3-1
FY436082       --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus sativus cv GSK3-1
FY437949       --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus sativus cv GSK3-1
FY439298       --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus sativus cv GSK3-1
EV551354       --> TACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> TACGGTAGGACCATGTACACCATCCGTCAGAGGATTGGTCCTTTGCTTAT  Raphanus sativus var. oleiformis
EY898665       --> TACGGTAGGGCTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus
EV527681       --> CACGGTAGGACTATGTACACCATCCGTCAGAGAATTGGTCCTTTGCTTAT  Raphanus raphanistrum subsp. maritimus

               548    -    598
UN17085        --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. maritimus
EW719383       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus var. oleiformis
FD539046       <-- GCAAATGGAGAAACGATATGGTAAGGTTGATGATTCTGGTGAGCTAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus var. oleiformis
EY918494       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. landra
EX774810       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. landra
FD944568       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. maritimus
EW738267       <-- GCAAATGGAGAAACGATATGGTAGGGTGGATGATTCTGGTGAGCTAACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus var. oleiformis
FD937473       <-- GCAAATGGAGGAACGATATGGTAAGGTGGATGATTCTGGTGATCTAACAG  Raphanus sativus var. oleiformis
EX900287       <-- GCAAATGGGGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- GCAAATGGAGAAACGATGTGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. landra
EY903680       <-- ........AGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- ..........................................GCTAACAG  Raphanus raphanistrum subsp. landra
FD959635       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD584119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv GSK3-1
FY436082       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv GSK3-1
FY437949       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv GSK3-1
FY439298       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus cv GSK3-1
EV551354       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTGGTGAGCTAACAG  Raphanus sativus var. oleiformis
EY898665       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. maritimus
EV527681       --> GCAAATGGAGAAACGATATGGTAAGGTGGATGATTCTAGTGAGCTAACAG  Raphanus raphanistrum subsp. maritimus

               598    -    648
UN17085        --> AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- AGAAAGAGATAACCAGAGCTGAGAGAAATGCCGGATTCGTTAGCAGTAGA  Raphanus raphanistrum subsp. maritimus
EW719383       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus var. oleiformis
FD539046       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- AGAAAGAGATAATCAGAGCAGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- AGGAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus var. oleiformis
EY918494       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. landra
EX774810       <-- AGAAAGAGACAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. landra
FD944568       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. maritimus
EW738267       <-- AGAAAGAGATAATCAGAGCAGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- AGAAAGAAATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus var. oleiformis
FD937473       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus var. oleiformis
EX900287       <-- AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. landra
EY903680       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCTGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. landra
FD959635       <-- ......................GAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. maritimus
FD584119       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> AGAAAGAGATAATTAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv GSK3-1
FY436082       --> AGAAAGAGATAATTAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv GSK3-1
FY437949       --> AGAAAGAGATAATTAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv GSK3-1
FY439298       --> AGAAAGAGATAATTAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus cv GSK3-1
EV551354       --> AGAAAGAGATAATCAGAGCAGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> AGAAAGAGATCATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus sativus var. oleiformis
EY898665       --> AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. maritimus
EV527681       --> AGAAAGAGATAATCAGAGCTGAGAGAAATGCCGGATTCATTAGCAGTAGG  Raphanus raphanistrum subsp. maritimus

               648    -    698
UN17085        --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACCGAAAGC
EW719383       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAATAAAGAACTGAAAGC
FD539046       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EV546465       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD935297       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EY918494       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EX774810       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD944568       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EY894654       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EW738267       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD945368       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD945695       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAAC
EX891543       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD937473       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EX900287       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EY920596       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EY903680       <-- T-GAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EY917663       <-- TTGAGAGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD959635       <-- TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FD584119       <-- ..........TTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EV531866       <-- ...............................GGAAGAAAGAACTGAAAGC
FY433922       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FY436082       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FY437949       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
FY439298       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EV551354       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EW715677       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAATAAAGAACTGAAAGC
EY898665       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC
EV527681       --> TTGAGGGAAATTCAGATGCAAAACTATCTGAGGAAGAAAGAACTGAAAGC

               698    -    748
UN17085        --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EW719383       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD539046       <-- TCAACGGGAGAAAGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EV546465       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD935297       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY918494       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EX774810       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD944568       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY894654       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EW738267       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD945368       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD945695       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EX891543       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD937473       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EX900287       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY920596       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY903680       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY917663       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD959635       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FD584119       <-- TTAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EV531866       <-- TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCTAGAATGGTA
FY433922       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FY436082       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FY437949       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
FY439298       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EV551354       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EW715677       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EY898665       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCAAGAATGGTA
EV527681       --> TCAACGGGAGAAGGATCTTCGTGAAGGGCTTCAGTTTTCCTAGAATGGTA

               748    -    798
UN17085        --> AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus
EW719383       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus var. oleiformis
FD539046       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus var. oleiformis
EY918494       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. landra
EX774810       <-- AATATAAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. landra
FD944568       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus
EW738267       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- AATATGCAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- AATATGAAGAACCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus var. oleiformis
FD937473       <-- AATATGAAGAAGCACTGGAGGGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus var. oleiformis
EX900287       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. landra
EY903680       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- AATATGAGGAAGCACTGTAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. landra
FD959635       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus
FD584119       <-- AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus
FY433922       --> AATATGAGGAAGCACTGGAAAGGTTTGAGTCTGTGTTAGGCTC.......  Raphanus sativus cv GSK3-1
FY436082       --> AATATGAGGAAGCACTGGAAAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv GSK3-1
FY437949       --> AATATGAGGAAGCACTGGAAAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv GSK3-1
FY439298       --> AATATGAGGAAGCACTGGAAAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus cv GSK3-1
EV551354       --> AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> AATATGAAGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus sativus var. oleiformis
EY898665       --> AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus
EV527681       --> AATATGAGGAAGCACTGGAGAGGTTTGAGTCTGTGTTAGGCTCCAAACCA  Raphanus raphanistrum subsp. maritimus

               798    -    848
UN17085        --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTACTTGTTGCTACTC
EW719383       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FD539046       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EV546465       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTCGCTTGTTGCTACTC
FD935297       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY918494       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EX774810       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTT
FD944568       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY894654       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EW738267       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAGTGTCGCTTGTTGCTACTT
FD945368       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FD945695       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EX891543       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FD937473       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EX900287       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY920596       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY903680       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY917663       <-- ACCCCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FD959635       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FD584119       <-- ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCATGTTGCTACTT
EV531866       <-- ACACCAGATGAAGCATCAATTTCAGGTTACAATGTTGCTTGTTGCTACTT
FY433922       --> ..................................................
FY436082       --> ACACCAGATGAAGCAT..................................
FY437949       --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
FY439298       --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EV551354       --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTCGCTTGTTGCTACTC
EW715677       --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EY898665       --> ACACCAGATGAAGCATCAATTTCAAGTTACAATGTTGCTTGTTGCTACTC
EV527681       --> ACACCAGATGAAGCATCAATTTCAGGTTACAATGTTGCTTGTTGCTACTC

               848    -    898
UN17085        --> TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EW719383       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD539046       <-- TAAACTTAATCAGGTTCAAGCTGGTCTCACGGCTCTGGAAGAAGCATTGA
EV546465       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD935297       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EY918494       <-- TAAGCCTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EX774810       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD944568       <-- TAGGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EY894654       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EW738267       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTTTCGGCTCTGGAAGAAGCATTGA
FD945368       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD945695       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EX891543       <-- TAAGTTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD937473       <-- TAAGCTTAATCAGGTTCAAGCTGGTCCCTCGGCTCTGGAAGAAGCATTGA
EX900287       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EY920596       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EY903680       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
EY917663       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD959635       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA
FD584119       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTTTCGGCTCTGGAAGAAGCATTGA
EV531866       <-- TAAGCTTAATCAGGTTCAAGCTGGTCTTTCGGCTCTGGAAGAAGCATTGA
FY433922       --> ..................................................
FY436082       --> ..................................................
FY437949       --> TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCACTGA
FY439298       --> TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCACTGA
EV551354       --> TAAGCTTAATC.......................................
EW715677       --> TAAGCTTAATCACGTTCAAGCTGGTCTCTCGGCTCTGGAAGA-GCATTGA
EY898665       --> TAAGCTTA..........................................
EV527681       --> TAAGCTTAATCAGGTTCAAGCTGGTCTCTCGGCTCTGGAAGAAGCATTGA

               898    -    948
UN17085        --> AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EW719383       <-- AGTCAGGATATGAAGATTTCAAG--AATCCGAAGCGATCCAGATCTGGAA
FD539046       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EV546465       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD935297       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EY918494       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EX774810       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD944568       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EY894654       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EW738267       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD945368       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD945695       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EX891543       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD937473       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EX900287       <-- AGTCAGGATATGAAGATTTCAAGAGAACCCGAAGCGATCCAGATCTGGAA
EY920596       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EY903680       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EY917663       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD959635       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FD584119       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
EV531866       <-- AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA
FY433922       --> ..................................................
FY436082       --> ..................................................
FY437949       --> AGTCAGGGTATGA.....................................
FY439298       --> AGTCA.............................................
EV551354       --> ..................................................
EW715677       --> AGTCACGATATGAAGATTTCAAGAatccga....................
EY898665       --> ..................................................
EV527681       --> AGTCAGGATATGAAGATTTCAAGAGAATCCGAAGCGATCCAGATCTGGAA

               948    -    998
UN17085        --> AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. maritimus
EW719383       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus var. oleiformis
FD539046       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- AACATCAGGAAGTCAGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus var. oleiformis
EY918494       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. landra
EX774810       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. landra
FD944568       <-- AACATCAGGAAGTCGGAGGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. maritimus
EW738267       <-- AACATCAGGAAGTCAGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus var. oleiformis
FD937473       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus var. oleiformis
EX900287       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. landra
EY903680       <-- AACATCAGGAAGTCAGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. landra
FD959635       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. maritimus
FD584119       <-- AACATCAGGAAGTCGGAAGCTTTTGATCCACTCATGAAGCAGTTTGATGA  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. maritimus
FY433922       --> ..................................................  Raphanus sativus cv GSK3-1
FY436082       --> ..................................................  Raphanus sativus cv GSK3-1
FY437949       --> ..................................................  Raphanus sativus cv GSK3-1
FY439298       --> ..................................................  Raphanus sativus cv GSK3-1
EV551354       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> ..................................................  Raphanus sativus var. oleiformis
EY898665       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527681       --> AACATCAGGAAGTCGGAAGCTTTCGATCCACTCATGAAGCAGTTTGATGA  Raphanus raphanistrum subsp. maritimus

               998    -   1048
UN17085        --> ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. maritimus
EW719383       <-- ACCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus var. oleiformis
FD539046       <-- ATCTTTCATCAACGAGAGTGCCATTAATGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCACCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus var. oleiformis
EY918494       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTCTGGCT  Raphanus raphanistrum subsp. landra
EX774810       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. landra
FD944568       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. maritimus
EW738267       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus var. oleiformis
FD937473       <-- ATCTTTCATCAACGAGAGTGCCATTAACTCCATCAAATCCTTGTTTGGCT  Raphanus sativus var. oleiformis
EX900287       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. landra
EY903680       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- ATCTTTCATCAACGAGAGTGCCGTTAATGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. landra
FD959635       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. maritimus
FD584119       <-- ATCTTTCATCAACGAGAGTGCCATTAACGCCATCAAATCCTTGTTTGGCT  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ATCTTTCTTCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. maritimus
FY433922       --> ..................................................  Raphanus sativus cv GSK3-1
FY436082       --> ..................................................  Raphanus sativus cv GSK3-1
FY437949       --> ..................................................  Raphanus sativus cv GSK3-1
FY439298       --> ..................................................  Raphanus sativus cv GSK3-1
EV551354       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> ..................................................  Raphanus sativus var. oleiformis
EY898665       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527681       --> ATCTTTCATCAACGAGAGTGCCATTAACGCTATCAAATCCTTGTTTGGCT  Raphanus raphanistrum subsp. maritimus

               1048   -   1098
UN17085        --> TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EW719383       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
FD539046       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EV546465       <-- TTAACAAGAAATAGTTCACCACCCCAAGTTCATAGCTTCTCTTTTCTTCT
FD935297       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EY918494       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EX774810       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTTT
FD944568       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EY894654       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EW738267       <-- TTAACAAGAAATAGTTCACCCCCCCAAGTTCATAGCTTCTCTTTTTTTTT
FD945368       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
FD945695       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EX891543       <-- TTAACAAGAAATAGTTCGCCCCCTCAAGTTCATAGCTTCTCTTTTCTTCT
FD937473       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EX900287       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EY920596       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EY903680       <-- TCAACAAGAAATAGTTCACCACCCCAAGTTCATAGCTTCTCTTTTCTTCT
EY917663       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
FD959635       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
FD584119       <-- TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT
EV531866       <-- TTAACAAGAAATAGTTCCCCCCCTCAAGTTCATAGCTTCTCTTTTttt..
FY433922       --> ..................................................
FY436082       --> ..................................................
FY437949       --> ..................................................
FY439298       --> ..................................................
EV551354       --> ..................................................
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> TTAACAAGAAATAGTTCACCACCTCAAGTTCATAGCTTCTCTTTTCTTCT

               1098   -   1148
UN17085        --> CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- CTTCTTGGCT----ATATATATA--TACTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. maritimus
EW719383       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus var. oleiformis
FD539046       <-- CTTCTTGACT----ATATATATA----CTGGTGAGGAATTGTATTCAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus var. oleiformis
EY918494       <-- CTTCTTGGCT----ATATATATA--TACTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. landra
EX774810       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. landra
FD944568       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- CTTCTTGGCT----ATATATATA--TACTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. maritimus
EW738267       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus var. oleiformis
FD937473       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus var. oleiformis
EX900287       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. landra
EY903680       <-- CTTCTTGGCT----ATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- CTTCTTGGCTGTATATATATATA----CTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. landra
FD959635       <-- CTTCTTGGCT----ATATATATA--TACTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. maritimus
FD584119       <-- CTTCTTGGCT----ATATATATA--TACCGGTGAGGAATTGTATTCAA--  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> ..................................................  Raphanus sativus cv GSK3-1
FY436082       --> ..................................................  Raphanus sativus cv GSK3-1
FY437949       --> ..................................................  Raphanus sativus cv GSK3-1
FY439298       --> ..................................................  Raphanus sativus cv GSK3-1
EV551354       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> ..................................................  Raphanus sativus var. oleiformis
EY898665       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527681       --> CTTCTTGGCT----ATATATATATATACTGGTGAGGAATTGTATTCAA--  Raphanus raphanistrum subsp. maritimus

               1148   -   1198
UN17085        --> TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- TCGTATAAGGTGTTCTTTTTac............................  Raphanus raphanistrum subsp. maritimus
EW719383       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus var. oleiformis
FD539046       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV546465       <-- TCGTATAAGGTGTTCTTTTTTTTACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935297       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus var. oleiformis
EY918494       <-- TCGTATAAGGTGTTCTTTTT---ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. landra
EX774810       <-- TCGTATAAGGTGTTCTTTTT---ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. landra
FD944568       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus cv Early Scarlet Globe
EY894654       <-- TCGTATAAGGTGTTCTTTTT---ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. maritimus
EW738267       <-- TCGTATAAGGTGTTCTTTTTTTTACATGTGAATCTCTCTTTAC.......  Raphanus sativus cv Rat-Tail Radish #3870
FD945368       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus cv Early Scarlet Globe
FD945695       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus cv Early Scarlet Globe
EX891543       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus var. oleiformis
FD937473       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus var. oleiformis
EX900287       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus cv Early Scarlet Globe
EY920596       <-- TCGTATAAGGTGTTCTTTTT---ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. landra
EY903680       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917663       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. landra
FD959635       <-- TCGTATAAGGTGTTCTTTTT---ACATGTGAATCTCTCTTTACCATTACA  Raphanus raphanistrum subsp. maritimus
FD584119       <-- TCGTATAAGGTGTTCTTTTTT--ACATGTGAATCTCTCTTTACCATTACA  Raphanus sativus cv Rat-Tail Radish #3870
EV531866       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433922       --> ..................................................  Raphanus sativus cv GSK3-1
FY436082       --> ..................................................  Raphanus sativus cv GSK3-1
FY437949       --> ..................................................  Raphanus sativus cv GSK3-1
FY439298       --> ..................................................  Raphanus sativus cv GSK3-1
EV551354       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715677       --> ..................................................  Raphanus sativus var. oleiformis
EY898665       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527681       --> T.................................................  Raphanus raphanistrum subsp. maritimus

               1198   -   1248
UN17085        --> GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCTCTTT
FD539046       <-- GTCAg.............................................
EV546465       <-- GTCAATTTGTATTTTCTCATACGAAATGAAAGTAAAACTCAAGCCTCTTT
FD935297       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCTCTTT
EY918494       <-- GTCAATTTGTATTTTCTCATAc............................
EX774810       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACT...........
FD944568       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCT....
EY894654       <-- GTCAATTTGTATTTTCTC................................
EW738267       <-- ..................................................
FD945368       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCT....
FD945695       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCTCTTT
EX891543       <-- GTCAATTTGTATTTTCTCACATGAAATGAAAGT.................
FD937473       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCT....
EX900287       <-- GTCAATTTGTATTTTCTCACATGAAATGAAAGTAAAACTCAAGCCc....
EY920596       <-- GTCAACTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCT....
EY903680       <-- TTTAATTTGTATTTTCTTATATGAAATGAAAGTAAAACTCAAGCC.....
EY917663       <-- GTCAATTTGTATTTTCcc................................
FD959635       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCCTCTTT
FD584119       <-- GTCAATTTGTATTTTCTCATATGAAATGAAAGTAAAACTCAAGCC.....
EV531866       <-- ..................................................
FY433922       --> ..................................................
FY436082       --> ..................................................
FY437949       --> ..................................................
FY439298       --> ..................................................
EV551354       --> ..................................................
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               1248   -   1298
UN17085        --> TTATGACCAGACATGTAGCGTAATGGTTTGTATTAATTAGTATGTCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529377       <-- ..................................................
EW719383       <-- TTATG.............................................
FD539046       <-- ..................................................
EV546465       <-- TTATGACC..........................................
FD935297       <-- TTAcg.............................................
EY918494       <-- ..................................................
EX774810       <-- ..................................................
FD944568       <-- ..................................................
EY894654       <-- ..................................................
EW738267       <-- ..................................................
FD945368       <-- ..................................................
FD945695       <-- TTATG.............................................
EX891543       <-- ..................................................
FD937473       <-- ..................................................
EX900287       <-- ..................................................
EY920596       <-- ..................................................
EY903680       <-- ..................................................
EY917663       <-- ..................................................
FD959635       <-- TTATGACCAGACATGTAGCGTAATGGTTTGTATTAATTAGTATGTCATGT
FD584119       <-- ..................................................
EV531866       <-- ..................................................
FY433922       --> ..................................................
FY436082       --> ..................................................
FY437949       --> ..................................................
FY439298       --> ..................................................
EV551354       --> ..................................................
EW715677       --> ..................................................
EY898665       --> ..................................................
EV527681       --> ..................................................

               1298   -   1348
UN17085        --> TATTACCT
                   ~~~~~~~~
FD529377       <-- ........
EW719383       <-- ........
FD539046       <-- ........
EV546465       <-- ........
FD935297       <-- ........
EY918494       <-- ........
EX774810       <-- ........
FD944568       <-- ........
EY894654       <-- ........
EW738267       <-- ........
FD945368       <-- ........
FD945695       <-- ........
EX891543       <-- ........
FD937473       <-- ........
EX900287       <-- ........
EY920596       <-- ........
EY903680       <-- ........
EY917663       <-- ........
FD959635       <-- TATTACCT
FD584119       <-- ........
EV531866       <-- ........
FY433922       --> ........
FY436082       --> ........
FY437949       --> ........
FY439298       --> ........
EV551354       --> ........
EW715677       --> ........
EY898665       --> ........
EV527681       --> ........