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Alignment for radish unigene UN17088

               1      -     51
UN17088        --> GAACACCCGTTTGTGTATGGTAAAGATCTCAGCGAGGCACGGTAGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- GAACACCCGTTTGTGTATGGTAAAGATCTCAGCGAGGCACGGTAGGAAAG
EX766168       <-- ..........tttttttTGGTAAAGATCTCAGCGAGGCACGTTAGGAAAG
EX894662       <-- ...................GTAAAGATCTCAGCGAGGCACGGTAGGAAAG
EV538541       <-- ..................................AGGCACGGTAGGAAAG
FD954554       <-- ..................................................
EY913047       <-- ..................................................
EV551590       <-- ..................................................
EW715785       <-- ..................................................
EX896031       <-- ..................................................
FY443504       <-- ..................................................
FD970134       <-- ..................................................
EV527837       <-- ..................................................
FD541669       <-- ..................................................
EX763588       <-- ..................................................
EY897288       <-- ..................................................
EY933463       <-- ..................................................
FD938494       <-- ..................................................
EX905846       <-- ..................................................
EW727431       --> GAACACCCGTTTGTGTATGGTAAAGATCTCAGCGAGGCACGGTAGGAAAG
EX769851       --> ...................GTAAAGATCTCAGCGAGGCACGTTAGGAAAG
EV542525       --> ..................................AGGCACGGTAGGAAAG
EY909352       --> .................................................G
EV546661       --> ..................................................
EW720228       --> ..................................................
EY893650       --> ..................................................
FD966570       --> ..................................................
EV531977       --> ..................................................
EW727131       --> ..................................................
FD537897       --> ..................................................
EX767644       --> ..................................................
FD934849       --> ..................................................

               51     -    101
UN17088        --> GTCTCAAACAAAGAAAAAA--CGAATCAGAGTAACCA-CCCAAATAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- GTCTCAAACAAAGAAAAAA--CGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- GTCTCAAACAAAGAAAAAA-ACGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- GTCTCAAACAAAGAAAAAA--CGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- GTCTCAAACAAA-AAAAAA--CGAATCAGAGTAACCAACCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- .TCTCAAACAAACAAAAAA--CGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- gtaTCAAACAAACAAAAAAAACGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- ..................A--CGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- ...................agCGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus sativus var. oleiformis
EX896031       <-- ..........................CAGAGTAATCA-CCCAAATAAATA  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- ...........................AGAGTAACCA-CCCAAATAAATA  Raphanus sativus cv GSK3-1
FD970134       <-- ............................GAGTAACCA-CCCAAATAAA-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- ................................AACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. maritimus
FD541669       <-- ................................gACCA-CCCAAATAAA-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- ..................................CCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- ..................................CCA-CCCAAATAAATA  Raphanus raphanistrum subsp. maritimus
EY933463       <-- ..................................CCA-CCCAAATAAATA  Raphanus sativus var. oleiformis
FD938494       <-- .............................ttttgCCA-CCCAAATAAATA  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> GTCTCAAACAAAGAAAAAA--CGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus sativus cv Early Scarlet Globe
EX769851       --> GTCTCAAACAAAGAAAAAA-ACGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> GTCTCAAACAAA-AAAAAA--CGAATCAGAGTAACCAACCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> GTATCAAACAAACAAAAAAAACGAATCAGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> ................AAA--CGAATCAAAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> ...................agCGAATCAAAGTAACCA-CCCAAATAAATA  Raphanus sativus var. oleiformis
EY893650       --> ..........................cgGAGTAACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. maritimus
FD966570       --> ..........................ccGAGTAACCA-CCCAAATAAA-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> ................................AACCA-CCCAAATAAATA  Raphanus raphanistrum subsp. maritimus
EW727131       --> .................................ACCA-CCCAAATAAATA  Raphanus sativus cv Early Scarlet Globe
FD537897       --> ................................gACCA-CCCAAATAAA-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> ..................................CCA-CCCAAATAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN17088        --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX766168       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX894662       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EV538541       <-- ATAAAAAGCAAAAGCAAAGCGAAGGTCAGAATCAAGAAAAAACAAAACAC
FD954554       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCAAGAAAA-ACAAAACAC
EY913047       <-- ATAAAAAGCAAAAGCAAAACGAAGGTCAGAATCAAGAAAAAACAAAACAC
EV551590       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EW715785       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX896031       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FY443504       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCAAGAAAA-ACAAAACAC
FD970134       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EV527837       <-- ATAAAAAGCAAA-GCACAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FD541669       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX763588       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EY897288       <-- CTAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EY933463       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FD938494       <-- ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCAAGAAAA-ACAAAACAC
EX905846       <-- ..................................................
EW727431       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX769851       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EV542525       --> ATAAAAAGCAAAAGCAAAGCGAAGGTCAGAATCAAGAAAAAACAAAACAC
EY909352       --> ATAAAAAGCAAAAGCAAAACGAAGGTCAGAATCAAGAAAAAACAAAACAC
EV546661       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EW720228       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAAAATCACGAAAA--CAAAACAC
EY893650       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FD966570       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAAAATCACGAAAA--CAAAACAC
EV531977       --> ATAAAAAGCAAA-GCACAACGAAGGTCAAAATCACGAAAA--CAAAACAC
EW727131       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FD537897       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
EX767644       --> ATAAAAAGCAAA-GCAAAACGAAGGTCAGAATCACGAAAA--CAAAACAC
FD934849       --> .TAAAAAGCAAA-GCAAAACGAAGGTCAGAATCAAGAAAA-ACAAAACAC

               151    -    201
UN17088        --> AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- AAAGGAAGCAAA-TCTGTTTAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAA---GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- AAAGGAAGCAAA-TCTGTTTAAAAAAAAA--GAAGA---TCTCACTTAGC  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- AAAGGAAGCAAA-TCTG--TAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAA---GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAA-AA--TCTCACTTAGC  Raphanus sativus var. oleiformis
EX896031       <-- AAAGGAAGCAAA-TCTGTTTAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- AAAGGAAGCAAAGTC----TGTAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv GSK3-1
FD970134       <-- AAAGGAAGCAAA-TCTGT-AAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. maritimus
FD541669       <-- AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. maritimus
EY933463       <-- AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--AAAGAAAATCTCACTTAGC  Raphanus sativus var. oleiformis
FD938494       <-- AAAGGAAGCAAA-TCTGTTAAAAAAAAAAAAGAAGAA--TCTCACTTAGC  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> AAAGGAAGCAAA-TCTGTTTAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv Early Scarlet Globe
EX769851       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAA---GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> AAAGGAAGCAAA-TCTGT--AAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAA---GAAAAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAA-AA--TCTCACTTAGC  Raphanus sativus var. oleiformis
EY893650       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAAAA--TCTCACTTAGC  Raphanus raphanistrum subsp. maritimus
FD966570       --> AAAGGAAGCAAA-TCTGT-AAAAAAAAAA--GAAAAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. maritimus
EW727131       --> AAAGGAAGCAAA-TCTGTTTAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus sativus cv Early Scarlet Globe
FD537897       --> AAAGGAAGCAAA-TCTGTAAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAAA--GAAGAA--TCTCACTTAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> AAAGGAAGCAAA-TCTGTTAAAAAAAAAAAAGAAGAA--TCTCACTTAGC  Raphanus sativus var. oleiformis

               201    -    251
UN17088        --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- CATCATAACTTTGGCGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX766168       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX894662       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV538541       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGACCATCACCATCGA
FD954554       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EY913047       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV551590       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EW715785       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX896031       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FY443504       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FD970134       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV527837       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FD541669       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX763588       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGG
EY897288       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EY933463       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FD938494       <-- CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX905846       <-- ..................................................
EW727431       --> CATCATAACTTTGGCGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX769851       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV542525       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGACCATCACCATCGA
EY909352       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV546661       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EW720228       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EY893650       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FD966570       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EV531977       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EW727131       --> CATCATAACTTTGGCGAACTCATCATAGTTGATCTGGCCATCACCATCGA
FD537897       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA
EX767644       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGG
FD934849       --> CATCATAACTTTGACGAACTCATCATAGTTGATCTGGCCATCACCATCGA

               251    -    301
UN17088        --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- CGTCAGCCTCACGGACAATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- CGTCAGCCTCACGGACCATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- CGCCAGCCTCACGGACCATCTCAACAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus var. oleiformis
EX896031       <-- CGTCAGCCTCACGGACCATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- CGTCAGCCTCACGGACCATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv GSK3-1
FD970134       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. maritimus
FD541669       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. maritimus
EY933463       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus var. oleiformis
FD938494       <-- CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> CGTCAGCCTCACGGACAATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
EX769851       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> CGCCAGCCTCACGGACCATCTCAACAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus var. oleiformis
EY893650       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. maritimus
FD966570       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. maritimus
EW727131       --> CGTCAGCCTCACGGACAATCTCATCGACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
FD537897       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> CGTCAGCCTCACGGACCATCTCATCAACTTCCTCGTCAGTGAGCTTCTCA  Raphanus sativus var. oleiformis

               301    -    351
UN17088        --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCTGCTGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus var. oleiformis
EX896031       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv GSK3-1
FD970134       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGACGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. maritimus
FD541669       <-- CCGAGGTTAGTCATGATGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. maritimus
EY933463       <-- CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus var. oleiformis
FD938494       <-- CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> CCGAGATTAGTCATGACGTGGCGGA.........................  Raphanus sativus cv Early Scarlet Globe
EX769851       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> CCGAGATTAGTCATGACGTGGCGGAGCTCAGCTGCTGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAAATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAAATGAAACCGTT  Raphanus sativus var. oleiformis
EY893650       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. maritimus
FD966570       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAAACAAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAAATGAAACCGTT  Raphanus raphanistrum subsp. maritimus
EW727131       --> CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus sativus cv Early Scarlet Globe
FD537897       --> CCGAGGTTAGTCATGATGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> CCGAGGTTAGTCATGACGTGGCGGAGCTCAGCGGCGGAGATGAAACCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> CCGAGATTAGTCATGACGTGGCGGAGCTCAGCGGCGGAAATGAAACCGTT  Raphanus sativus var. oleiformis

               351    -    401
UN17088        --> CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX766168       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX894662       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTTCTTGAGCTCTTCCTCGGAGT
EV538541       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD954554       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EY913047       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EV551590       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EW715785       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX896031       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FY443504       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD970134       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCCTCCTCGGAGT
EV527837       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD541669       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX763588       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EY897288       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EY933463       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD938494       <-- CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX905846       <-- ..................................................
EW727431       --> ..................................................
EX769851       --> CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EV542525       --> CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EY909352       --> CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EV546661       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EW720228       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EY893650       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD966570       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCCTCCTCGGAGT
EV531977       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EW727131       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD537897       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
EX767644       --> CTGGTCCTTGTCGAAGACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT
FD934849       --> CTGGTCCTTGTCGAAAACCCTGAAGGCTTCCTTGAGCTCTTCCTCGGAGT

               401    -    451
UN17088        --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCCGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTC-CAGAAATCA  Raphanus sativus var. oleiformis
EX896031       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- CAGTGTCTTTCATCTTGCGGGCCATCAGGTTCAAGAACTCGGGGAAATCA  Raphanus sativus cv GSK3-1
FD970134       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCAGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. maritimus
FD541669       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCAGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- CAGTGTCTTTCATCTTGCGGGACATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. maritimus
EY933463       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCCGGGAAATCA  Raphanus sativus var. oleiformis
FD938494       <-- CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769851       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCCGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTC-CAAAAATCA  Raphanus sativus var. oleiformis
EY893650       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. maritimus
FD966570       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCAGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. maritimus
EW727131       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus cv Early Scarlet Globe
FD537897       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCAGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> CAGTGTCTTTCATCTTGCGGGACATGAGGTTCAAGAACTCGGGGAAATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> CAGTGTCTTTCATCTTGCGGGCCATGAGGTTCAAGAACTCTGGGAAATCA  Raphanus sativus var. oleiformis

               451    -    501
UN17088        --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus sativus var. oleiformis
EX896031       <-- ATCGTTCCGTTGCCGTCCGCGTAAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus sativus cv GSK3-1
FD970134       <-- ATCGTTCCGTTTCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCc.......  Raphanus raphanistrum subsp. maritimus
FD541669       <-- ATCGTTCCGTTTCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. maritimus
EY933463       <-- ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus sativus var. oleiformis
FD938494       <-- ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769851       --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus sativus var. oleiformis
EY893650       --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. maritimus
FD966570       --> ATCGTTCCGTTTCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> ATCGTTCCGTTGCCGTCGGCGTCAACCTCGTTGATCATGTCCc.......  Raphanus raphanistrum subsp. maritimus
EW727131       --> ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus cv Early Scarlet Globe
FD537897       --> ATCGTTCCGTTTCCGTCGGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGGAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> ATCGTTCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGAAGCTC  Raphanus sativus var. oleiformis

               501    -    551
UN17088        --> GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- TGCTTCTGTCGGGTTCTGACAAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus cv Early Scarlet Globe
EX766168       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894662       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus cv Early Scarlet Globe
EV538541       <-- GGCTTCGGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCTAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954554       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY913047       <-- GGCTTCGGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551590       <-- GGATTCTGTCGGGTTCTGA...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715785       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus sativus var. oleiformis
EX896031       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus cv Early Scarlet Globe
FY443504       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus sativus cv GSK3-1
FD970134       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527837       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD541669       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763588       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897288       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. maritimus
EY933463       <-- GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus sativus var. oleiformis
FD938494       <-- TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus var. oleiformis
EX905846       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW727431       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769851       --> GGCTTCTG..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542525       --> GGCTTCGGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCTAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909352       --> GGCTTCGGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546661       --> GGATTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720228       --> GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus sativus var. oleiformis
EY893650       --> GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. maritimus
FD966570       --> TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531977       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW727131       --> TGCTTCTGTCGGGTTCTGACAAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus cv Early Scarlet Globe
FD537897       --> TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACTGTCCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767644       --> GGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934849       --> TGCTTCTGTCGGGTTCTGACCAAGCGATCTCATGACAGTGCCCAGCTCCT  Raphanus sativus var. oleiformis

               551    -    601
UN17088        --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EX766168       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAATAGGCTGAAGGCTTCC
EX894662       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EV538541       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FD954554       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EY913047       <-- TTGTGGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EV551590       <-- ..................................................
EW715785       <-- TTGTAGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EX896031       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FY443504       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FD970134       <-- TTGTCGTGATGCAGCCATCTCCGTC--CGTCGAAAAGGCTGAAGGCTTCC
EV527837       <-- ..................................................
FD541669       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EX763588       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EY897288       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAATAGGCTGAAGGCTTCC
EY933463       <-- TTGTAGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FD938494       <-- TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EX905846       <-- .................TCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EW727431       --> ..................................................
EX769851       --> ..................................................
EV542525       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EY909352       --> TTGTGGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EV546661       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EW720228       --> TTGTAGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
EY893650       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAATAGGCTGAAGGCTTCC
FD966570       --> TTGTCGTGATGCAGCC..................................
EV531977       --> ..................................................
EW727131       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FD537897       --> TTGTCGTGATGCAGC...................................
EX767644       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC
FD934849       --> TTGTCGTGATGCAGCCATCTCCGTCCTTGTCGAAAAGGCTGAAGGCTTCC

               601    -    651
UN17088        --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EX766168       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTTCTTC
EX894662       <-- TTAAACTCG.........................................
EV538541       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
FD954554       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EY913047       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EV551590       <-- ..................................................
EW715785       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EX896031       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
FY443504       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTct
FD970134       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EV527837       <-- ..................................................
FD541669       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EX763588       <-- CTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EY897288       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTTCTTC
EY933463       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
FD938494       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EX905846       <-- TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EW727431       --> ..................................................
EX769851       --> ..................................................
EV542525       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EY909352       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EV546661       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EW720228       --> TTAAACTCGGAAATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
EY893650       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTTCTTC
FD966570       --> ..................................................
EV531977       --> ..................................................
EW727131       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
FD537897       --> ..................................................
EX767644       --> CTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC
FD934849       --> TTAAACTCGGAGATCTGGTCATCGGTTAGCTGATCTGCCATTTTTCTTTC

               651    -    701
UN17088        --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722573       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTA-TCGC
EX766168       <-- TTTTGTTTGTTTGTTTGTTTGTTT-GTTTCTTCTTCGATTCCCTAATCGC
EX894662       <-- ..................................................
EV538541       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
FD954554       <-- TTTTGTT-T---GTTTGTTTGTTTGTTT-CCTCTTCGATTCCCTAATCGC
EY913047       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
EV551590       <-- ..................................................
EW715785       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
EX896031       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
FY443504       <-- t.................................................
FD970134       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCcc
EV527837       <-- ..................................................
FD541669       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCcc
EX763588       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
EY897288       <-- TTTTGTT-T---GTTtcc................................
EY933463       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
FD938494       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
EX905846       <-- TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATagc
EW727431       --> ..................................................
EX769851       --> ..................................................
EV542525       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
EY909352       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
EV546661       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC
EW720228       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
EY893650       --> TTTTGTT-T---GTTtcc................................
FD966570       --> ..................................................
EV531977       --> ..................................................
EW727131       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTA-TCGC
FD537897       --> ..................................................
EX767644       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTcc....
FD934849       --> TTTTGTT-G---GTT-GTTTGTTT-CTT-CTTCTTCGATTCCCTAATCGC

               701    -    751
UN17088        --> GTGGTCC
                   ~~~~~~~
EW722573       <-- GTc....
EX766168       <-- cc.....
EX894662       <-- .......
EV538541       <-- cc.....
FD954554       <-- GTcc...
EY913047       <-- .......
EV551590       <-- .......
EW715785       <-- .......
EX896031       <-- GTcc...
FY443504       <-- .......
FD970134       <-- .......
EV527837       <-- .......
FD541669       <-- .......
EX763588       <-- .......
EY897288       <-- .......
EY933463       <-- GTGGTCC
FD938494       <-- GTcc...
EX905846       <-- cc.....
EW727431       --> .......
EX769851       --> .......
EV542525       --> cc.....
EY909352       --> .......
EV546661       --> GTcc...
EW720228       --> .......
EY893650       --> .......
FD966570       --> .......
EV531977       --> .......
EW727131       --> GTc....
FD537897       --> .......
EX767644       --> .......
FD934849       --> GTcc...