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Alignment for radish unigene UN17091

               1      -     51
UN17091        --> AACATCTGAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- .....CTGAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
FD956947       <-- .........ACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> AACATCTGAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
FD529363       --> .tttTCTGAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
EX776199       --> ......aGAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
FD568137       --> .......GAACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTACAT
FD554109       --> ......aggACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
FD974650       --> .......ggACGAAGACTGACGAAGTTGATAATTAAAGCGTAGCTTGCAT
EY919327       --> ...........................GATAATTAAAGCGTAGCTTGCAT

               51     -    101
UN17091        --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
FD956947       <-- GGGTTACAAGTTATACAACAACCAAAGTACACATACAAACGAAAAAACCC
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
FD529363       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
EX776199       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
FD568137       --> GG-TTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
FD554109       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
FD974650       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC
EY919327       --> GGGTTACAAGTTATACAACAACCAAAGAACACATACAAACGAAAAAACCC

               101    -    151
UN17091        --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD956947       <-- TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD558158       <-- ...............................................agA
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> TAAACAAGCCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD529363       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
EX776199       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD568137       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD554109       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
FD974650       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA
EY919327       --> TAAACAAACCCTAAAATCACACACAACAACAATAAAAGCTTCTAAAAGAA

               151    -    201
UN17091        --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD956947       <-- GAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD558158       <-- AAAAAACAAATCTGTGAGATA-T-ATAAGGAT-CAAATGTTTAAGCGGCT
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD529363       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
EX776199       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD568137       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD554109       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
FD974650       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT
EY919327       --> AAAAAACAAATCTGTGAGATAATAATAAGGATTCAAATGTTTAAGCGGCT

               201    -    251
UN17091        --> GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
FD956947       <-- GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
FD558158       <-- GATATCGCAGCATAGTCTTGATAACGAGACATG-CGCCTTTAAACTTGTG
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> GATATCGCAGCACAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
FD529363       --> GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
EX776199       --> GATATCGCAGCATAGTCTTGATAACAAGACATGGCGCCTTTAAACTTGTG
FD568137       --> GATATCGCAGCATAGTCTTGATAACGAGACATAGCGCCTTTAAACTTGTG
FD554109       --> GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG
FD974650       --> GATATCGCAGCATAGTCTTGATAACGAGACATGGGGCCTTTAAACTTGTG
EY919327       --> GATATCGCAGCATAGTCTTGATAACGAGACATGGCGCCTTTAAACTTGTG

               251    -    301
UN17091        --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA
FD956947       <-- ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCTTTGAAAA
FD558158       <-- ATCGTCTCCTTTGTGAGTGTTCAAGCTATGCGGGATGTACGCC-TGAAAA
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> ATCGTCTCCTTCGTGAGTGCTCAAGCTATGCGGGATGTACGCTTTGAAAA
FD529363       --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA
EX776199       --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA
FD568137       --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA
FD554109       --> ATCGTCTCCTTTGTGAGTGTTCAAGCTATGCGGGATGTACGCCCTGAAAA
FD974650       --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCTTTGAAAA
EY919327       --> ATCGTCTCCTTTGTGAGTGCTCAAGCTATGCGGGATGTACGCCCTGAAAA

               301    -    351
UN17091        --> CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
FD956947       <-- CCTCCTCGAGATCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCTAGA
FD558158       <-- CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
FY435190       <-- ....CTCGAGATCCGGTCTCGT-TTCAGCTCACGGCAAGCCACCTCTAGA
EW733701       <-- ...............................................AGA
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> CCTCCTCGAGATCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCTAGA
FD529363       --> CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
EX776199       --> CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
FD568137       --> CCTCCTCGAGATCCGGTCTCGTCTTCAGCTCACGGCACGCCACCTCCAGA
FD554109       --> CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA
FD974650       --> CCTCCTCGAGATCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCTAGA
EY919327       --> CCTCCTCGAGGTCCGGTCTCGTCTTCAGCTCACGGCAAGCCACCTCCAGA

               351    -    401
UN17091        --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
FD956947       <-- GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
FD558158       <-- GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
FY435190       <-- GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
EW733701       <-- GC-GTGTGTTCGAACCCTTTGTAGGATTTCTGGCGGCACACGTAACCGAA
EV550903       <-- ..................................................
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> GCCGTGTGTTCGAACCCTTTGTAGGATTTCTGGCGGCACACGTAACCGAA
FD529363       --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
EX776199       --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
FD568137       --> GCCGTGTGTTCGAACCCTCTGTAGAATTTCTGGCGGCAAACGTAACCGAA
FD554109       --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA
FD974650       --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGGGGCACACGTAACCGAA
EY919327       --> GCCGTGTGTTCGAACCCTTTGTAGAATTTCTGGCGGCACACGTAACCGAA

               401    -    451
UN17091        --> TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGAATA
FD956947       <-- TAAGAGAGAGATGAAGATGGGAGGAACCAGGAGAGTCGCCCAAACGAATA
FD558158       <-- TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGATTA
FY435190       <-- TAAGAGAGAGATGAAGATGAGAGGAACCAGGAGAGTCGCCCAAACGAATA
EW733701       <-- TAAGAGAGAGATGAAGATGAGAGGAACCAGGAGAGTCGCCCAAACGAATA
EV550903       <-- ...............................AGAGTCGCCCAAACGAATA
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> TAAGAGAGAGATGAAGATGAGAGGAACCAGGAGAGTCGCCCAAACGAATA
FD529363       --> TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGAATA
EX776199       --> TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGAATA
FD568137       --> TACGAGAGAGATGAAGATGAGAGGAGCCAAGAGAGTCGCCCAAACGAATA
FD554109       --> TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGATTA
FD974650       --> TAAGAGAGAGATGAAGATGAGAGGAACCAGGAGAGTCGCCCAAACGAATA
EY919327       --> TACGAGAGAGATGAAGATGAGAGGAACCAAGAGAGTCGCCCAAACGAATA

               451    -    501
UN17091        --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD956947       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD558158       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FY435190       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
EW733701       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
EV550903       <-- GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD529363       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
EX776199       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD568137       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD554109       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC
FD974650       --> GCTTG.............................................
EY919327       --> GCTTGACTCCCAAGTAACCAAACATAACCAGTTGGAACAGAAACAATGCC

               501    -    551
UN17091        --> GCTAGAATGCGGGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA
FD956947       <-- GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCc..
FD558158       <-- GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA
FY435190       <-- GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCGTA
EW733701       <-- GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCGTA
EV550903       <-- GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCGTA
FY449782       <-- ..................................................
FD564734       <-- ..................................................
FY448318       <-- ..................................................
EW738744       --> GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCTCCCGTAGCTCTCGTA
FD529363       --> GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA
EX776199       --> GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA
FD568137       --> GCTAGAATGCGAGTGTGAATGTGCGGCCACATCCCCCCGTAGCTCTCGTA
FD554109       --> GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA
FD974650       --> ..................................................
EY919327       --> GCTAGAATGCGGGTGTGAATATGCGGCCACATCCTCCCGTAGCTCTCGTA

               551    -    601
UN17091        --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. maritimus
FD956947       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD558158       <-- TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. landra
FY435190       <-- TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCACCCTA  Raphanus sativus cv GSK3-1
EW733701       <-- TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCACCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EV550903       <-- TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCACCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449782       <-- .......................CCTGGTTTCTAAGGATGAGCCACCCTA  Raphanus sativus cv GSK3-1
FD564734       <-- .....................................ATGAGCCAGCCTA  Raphanus sativus var. oleiformis
FY448318       <-- ..................................................  Raphanus sativus cv GSK3-1
EW738744       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCACCCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD529363       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. maritimus
EX776199       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. landra
FD568137       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTCCTAAGGATGAGCCAGCCTA  Raphanus sativus var. oleiformis
FD554109       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. landra
FD974650       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919327       --> TGCTGGAACGTACACTTTCAAAGCCTGGTTTCTAAGGATGAGCCAGCCTA  Raphanus raphanistrum subsp. landra

               601    -    651
UN17091        --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. maritimus
FD956947       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD558158       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. landra
FY435190       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG  Raphanus sativus cv GSK3-1
EW733701       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGAGATCACGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV550903       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449782       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG  Raphanus sativus cv GSK3-1
FD564734       <-- GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG  Raphanus sativus var. oleiformis
FY448318       <-- ..................................................  Raphanus sativus cv GSK3-1
EW738744       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGAGATCACGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD529363       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. maritimus
EX776199       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. landra
FD568137       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATCACGGAG  Raphanus sativus var. oleiformis
FD554109       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. landra
FD974650       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919327       --> GACCGAAGTAGATAACGCCGAATACGAGGATAAGAGGAGCGATTACGGAG  Raphanus raphanistrum subsp. landra

               651    -    701
UN17091        --> TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGAACCCTAGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- TAGCAGAAGGTGATAGTGAGGc............................  Raphanus raphanistrum subsp. maritimus
FD956947       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD558158       <-- TAGCAGAAGGTGATAGTGAGGATGAGCATGTCACTGGGAACCCTAGTCGC  Raphanus raphanistrum subsp. landra
FY435190       <-- TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGAACCCTAGTCGC  Raphanus sativus cv GSK3-1
EW733701       <-- TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGGACCCTAGTCGC  Raphanus sativus cv Rat-Tail Radish #3870
EV550903       <-- TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGAACCCTAGTCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449782       <-- TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGAACCCTAGTCGC  Raphanus sativus cv GSK3-1
FD564734       <-- TAGCAGAAGGTGATGGTGAGGATGAGCATGTCGCTTGGAACCCTAGTCGC  Raphanus sativus var. oleiformis
FY448318       <-- ..................................................  Raphanus sativus cv GSK3-1
EW738744       --> TAGCAGAAGGTGATAGTGAGGATGAGCATGTCGCTAGGGACCCTAGTCGC  Raphanus sativus cv Rat-Tail Radish #3870
FD529363       --> TAGCAGAAGGTGATAGTGAGGc............................  Raphanus raphanistrum subsp. maritimus
EX776199       --> TAGCAGAAGGTGATAGTGAGGATGAGCATGTCACTGGGAACCCTAGTCGC  Raphanus raphanistrum subsp. landra
FD568137       --> TAGCAGAAGGTGATGGTGAGGATGAGCATGTCGCTTGGAACCCTAGTCGC  Raphanus sativus var. oleiformis
FD554109       --> TAGCAGAAGGTGATAGTGAGGATGAGCATGTCACTGGGAACCCTAGTCGC  Raphanus raphanistrum subsp. landra
FD974650       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919327       --> TAGCAGAAGGTGATAGTGAGGATGAGCATGTCACTGGGAACCCTAGTCGC  Raphanus raphanistrum subsp. landra

               701    -    751
UN17091        --> GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956947       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD558158       <-- GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus raphanistrum subsp. landra
FY435190       <-- GTAGCTTAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTC.....  Raphanus sativus cv GSK3-1
EW733701       <-- GTAGCTTAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV550903       <-- GTAGCTTAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449782       <-- GTAGCTTAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus sativus cv GSK3-1
FD564734       <-- GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus sativus var. oleiformis
FY448318       <-- ..................................................  Raphanus sativus cv GSK3-1
EW738744       --> GTAGCTTAAGTCTCCTGGATACCAAGCTTCTTTGAC-TCTGCTT......  Raphanus sativus cv Rat-Tail Radish #3870
FD529363       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX776199       --> GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus raphanistrum subsp. landra
FD568137       --> GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus sativus var. oleiformis
FD554109       --> GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCT.......  Raphanus raphanistrum subsp. landra
FD974650       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919327       --> GTAGCTCAAGTCTCCTGGATACCAAGCTTCTTTGACCTCTGCTTCGGTTT  Raphanus raphanistrum subsp. landra

               751    -    801
UN17091        --> TGCATAGATACTTCTTTTTCAGATGGAATATTATCAAAGGTATGATCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- TGCATAGATACTTCTTTTTCAGGTGGAATATTATCAAAGGTATGATCCTA
FY435190       <-- ..................................................
EW733701       <-- TGCATAGATACTTCTTTTTTAAATGGAATATTATCAAAGGTATGATCCTA
EV550903       <-- TGCATAGATACTTCTTTTTTAAATGGAATATTATCAAAGGTATGATCCTA
FY449782       <-- TGCATAGATACTTCTTTTTTAAATGGAATATTATCAAAGGTATGATCCTA
FD564734       <-- TGCATAGATACTTCTTTTTCAGATGGAATATTATCAAAGGTATGATCCTA
FY448318       <-- ..................................CAAAGGTATG-TCCTA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> TGCATAGATACTTCTTTTT...............................
FD568137       --> TGCATAGATACTTCTTTTTCAGATGGAATATTATCAAAGGTATGATCCTA
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> TGCATAGATACTTCTTTTTCAG-TGGAATATTATCAAAGGTATGATCCTA

               801    -    851
UN17091        --> GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- GACAGCTCCAGGCCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
FY435190       <-- ..................................................
EW733701       <-- GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
EV550903       <-- GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
FY449782       <-- GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
FD564734       <-- GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
FY448318       <-- GACAGCTCGAGACCATAACCAACAAAGAACTTGAGAGCAACGTAGGTCAA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> GACAGCTCGAGACCATAACCAAC...........................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> GACAGCTCCAGGCCATAACCAACAAAGAACT-GAGAGCA-CGTAG-TCAA

               851    -    901
UN17091        --> GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATAG
FY435190       <-- ..................................................
EW733701       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATTG
EV550903       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATTG
FY449782       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATTG
FD564734       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATAG
FY448318       <-- GAAGAAAGTAGCGTTCTTAGGGAGACTAGTAGCCAAAACGGTGATAATTG
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> GAAGAAAGTAG.......................................

               901    -    951
UN17091        --> AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
FY435190       <-- ..................................................
EW733701       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
EV550903       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
FY449782       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
FD564734       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
FY448318       <-- AGTTTGGTTTCTTCTCAAGAGCCTTCAAATTCTGGAACAAAGACCCTGCG
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               951    -   1001
UN17091        --> AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAGTAAAAGTACTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- AGGc..............................................
FY435190       <-- ..................................................
EW733701       <-- AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAGTAAAAGTACTTCCC
EV550903       <-- AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAATAAAAGTACTTCCC
FY449782       <-- AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAGTAAAAGTACTTCCC
FD564734       <-- AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAGTAAAAGTACTTCCC
FY448318       <-- AGGGTAACACCGATGAAGACGTTCAAGACCGAGAAGTAAAAGTACTTCCC
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1001   -   1051
UN17091        --> GGAGGTAGCTCTAACGGCGTGGCTCTGCGAAGGGATCCCTTCAGACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- GGAGGTAGCTCTAACGGCGTGGCTCc........................
EV550903       <-- GGAGGTAGCTCTAACGGCGTGGCTCTGCGAAGGGATCCCTTCAGACTTGG
FY449782       <-- GGAGGTAGCTCTAACGGCGTGGCTCTGCGAAGGGATCCCTTCAGACTTGG
FD564734       <-- GGAGGTAGCTCTAACGGCGTGGCTCTGCGAAGGGATCCCCTCTGATTTTG
FY448318       <-- GGAGGTAGCTCTAACGGCGTGGCTCTGCGAAGGGATCCCTTCAGACTTGG
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1051   -   1101
UN17091        --> ATAAGAACATGAGGAACTTAGGCAGCATAGCCAAGAAGACGATGAGCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ATAAGAACATGAGGAACTTAGGCAGCATAGCCAAGAAGACGATGAGCGCA
FY449782       <-- ATAAGAACATGAGGAACTTAGGCAGCATAGCCAAGAAGACGATGAGCGCA
FD564734       <-- ATAGGAACATGAGGAACTTAGGCAGCATAGCCAAGAAGACGATGAGCGCT
FY448318       <-- ATAAGAACATGAGGAACTTAGGCAGCATAGCCAAGAAGACGATGAGCGCA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1101   -   1151
UN17091        --> ATCTGAGGGAGGTAAGACTCCAAGATGGTTTTAATGAAGCCTATCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ATCTGAGGGAGGTAAGACTCCAAGATGGTTTTAATGAAGCCTATCTCCAC
FY449782       <-- ATCTGAGGGAGGTAAGACTCCAAGATGGTTTTAATGAAGCCTATCTCCAC
FD564734       <-- ATCTGAGGAAGGTAAGACTCCAAGATGGTTTTAATGAAACCTATCTCCAC
FY448318       <-- ATCTGAGGGAGGTAAGACTCCAAGATGGTTTTAATGAAGCCTATCTCCAC
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1151   -   1201
UN17091        --> GATCGGCTTCAAGAAGGGAAGCGTCTTCTGGAGATTCTCGAGAGTGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- GATCGGCTTCAAGAAGGGAAGCGTCTTCTGGAGATTCTCGAGAGTGGTGA
FY449782       <-- GATCGGCTTCAAGAAGGGAAGCGTCTTCTGGAGATTCTCGAGAGTGGTGA
FD564734       <-- GATCGGCTTCAAGAAGGGAAGAGTCTTCTGGAGATTATCAAGAGTGc...
FY448318       <-- GATCGGCTTCAAGAAGGGAAGCGTCTTCTGGAGATTCTCGAGAGTGGTGA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1201   -   1251
UN17091        --> TGGCGGAGACGAACGCTATAGGGATCATGTAGAACAATATGGTTATAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- TGGCGGAGACGAACGCTATAGGGATCATGTAGAACAATATGGTTATAGCA
FY449782       <-- TGGCGGAGACGAACGCTATAGGGATCATGTAGAACAATATGGTTATAGCA
FD564734       <-- ..................................................
FY448318       <-- TGGCGGAGACGAACGCTATAGGGATCATGTAGAACAATATGGTTATAGCA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1251   -   1301
UN17091        --> ACGATGAAGTAGATCAGGTACTGCCTGACTATCCTGCTGAAGAACTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ACGATGAAGTAGATCAGGTACTGCCTGACTATCCc...............
FY449782       <-- ACGATGAAGTAGATCAGGTACTGCCTGACTATCCTGCTGAAGAACTTGAT
FD564734       <-- ..................................................
FY448318       <-- ACGATGAAGTAGATCAGGTACTGCCTGACTATCCTGCTGAAGAACTTGAT
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1301   -   1351
UN17091        --> CTTGAGATTCTCCCAGATGAGCTGGCGAGGCTCCGGAGCTTCGGTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- CTTGAGATTCTCCCAGATGAGCTGGCGAGGCTCCGGAGCTTCGGTCACCG
FD564734       <-- ..................................................
FY448318       <-- CTTGAGATTCTCCCAGATGAGCTGGCGAGGCTCCGGAGCTTCGGTCACCG
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1351   -   1401
UN17091        --> TCCATTTGTCAACCATCTGGCAGTGTAGAGACTGAGCGGCTAGAGCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- TCCATTTGTCAACCATCTGGCAGTGTAGAGACTGAGCGGCTAGAGCTGCA
FD564734       <-- ..................................................
FY448318       <-- TCCATTTGTCAACCATCTGGCAGTGTAGAGACTGAGCGGCTAGAGCTGCA
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1401   -   1451
UN17091        --> GTGACTCTGTCTGTGAAGAACACAACCGCTGCGGTTTGCTGCTTCTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD533075       <-- ..................................................
FD956947       <-- ..................................................
FD558158       <-- ..................................................
FY435190       <-- ..................................................
EW733701       <-- ..................................................
EV550903       <-- ..................................................
FY449782       <-- GTGACTCTGTCTGTGAAGAACACAACCGCTGCGG................
FD564734       <-- ..................................................
FY448318       <-- GTGACTCTGTCTGTGAAGAACACAACCGCTGCGGTTTGCTGCTTCTCAGC
EW738744       --> ..................................................
FD529363       --> ..................................................
EX776199       --> ..................................................
FD568137       --> ..................................................
FD554109       --> ..................................................
FD974650       --> ..................................................
EY919327       --> ..................................................

               1451   -   1501
UN17091        --> GAGAAC
                   ~~~~~~
FD533075       <-- ......
FD956947       <-- ......
FD558158       <-- ......
FY435190       <-- ......
EW733701       <-- ......
EV550903       <-- ......
FY449782       <-- ......
FD564734       <-- ......
FY448318       <-- GAGAAC
EW738744       --> ......
FD529363       --> ......
EX776199       --> ......
FD568137       --> ......
FD554109       --> ......
FD974650       --> ......
EY919327       --> ......