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Alignment for radish unigene UN17094

               1      -     51
UN17094        --> GCCACCACCTCCACAAAGTAATGATGCTGTAGAAGAACAAAATGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> GCCACCACCTCCACAAAGTAATGATGCTGTAGAAGAACAAAATGAAGAAG
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               51     -    101
UN17094        --> ATCAAGAAGAAGAAGAAGAGGATGAAAACAATGAAGAAAATGAAAATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> ATCAAGAAGAAGAAGAAGAGGATGAAAACAATGAAGAAAATGAAAATGAG
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               101    -    151
UN17094        --> CAGCAACAGGATCAAATACCTGAGGAGTTTATATTTGACGCTGAGGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> CAGCAACAGGATCAAATACCTGAGGAGTTTATATTTGACGCTGAGGGCGG
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               151    -    201
UN17094        --> TCTGGTGGATGAGAAGCTCCTCTTCTTTGCTCAACAAGCTCAGAGACGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> TCTGGTGGATGAGAAGCTCCTCTTCTTTGCTCAACAAGCTCAGAGACGTA
FD989262       --> ..........aAGAAGCTCCTCTTCTTTGCCCAACAAGCTCAGAGACGTA
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               201    -    251
UN17094        --> AGGGTAAAGCTGGAAGAGCGAAGAATGTCATATTCTCGGAAGATAGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> AGGGTAAAGCTGGAAGAGCAAAGAATGTCATATTCTCGGAAGATAGAGGA
FD989262       --> AGGGTAAAGCTGGAAGAGCGAAGAATGTCATATTCTCAGAAGATAGAGGA
FD535939       --> ..........................................gTAGAGGA
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               251    -    301
UN17094        --> CGCTATATAAAGCCAATGCTTCCAAAGGGTCCAGTAAAAAGATTAGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ..................................................
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> CGCTATATTAAGCCAATGCTTCCAAAGGGTCCAGTAAAAAGATTAGCAGT
FD989262       --> CGCTATATAAAGCCAATGCTTCCAAAGGGTCCAGTAAAAAGATTAGCAGT
FD535939       --> CGCTATATAAAGCCAATGCTTCCAAAGGGTCCAGTAAAAAGATTAGCAGT
FD939312       --> ..................................................
EY915290       --> ..................................................
EV550507       --> ..................................................

               301    -    351
UN17094        --> GGATGCAACACTTAGAGCAGCTGCGCCTTACCAGAAATTGCGCAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ........................................CGCAGAGAGA
EV545793       <-- ..................................................
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> GGATGCAACACTTAGAGCAGCTGCGCCTTACCAGAAATTGCGCAGAGAGA
FD989262       --> GGATGCAACACTTAGAGCAGCTGCGCCTTACCAGAAATTGCGCAGAGAGA
FD535939       --> GGATGCAACACTTAGAGCAGCTGCGCCTTACCAGAAATTGCGCAGAGAGA
FD939312       --> .......................gGCCTTACCAGAAATTGCGCAGAGAGA
EY915290       --> .......................................GCGCAGAGAGA
EV550507       --> ..................................................

               351    -    401
UN17094        --> AAGATATATCAGGAACTAGGAAAGTCTTTGTCGAGAAAACAGATATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- AAGATATATCAGGAACTAGGAAAGTCTTTGTCGAGAAAACAGATATGAGG
EV545793       <-- .................................................G
FD531492       <-- ..................................................
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> AAGATATTTCAGGAACTAGGAAGGTCTTTGTCGAGAAAACAGATATGAGG
FD989262       --> AAGATATATCAGGAACTAGGAAAGTCTTTGTCGAGAAAACAGATATGAGG
FD535939       --> AAGATATATCAGGAACTAGGAAAGTCTT-GTCGAGAAAACAGATATGAGG
FD939312       --> AAGATATTTCAGGAACTAGGAAGGTCTTTGTCGAGAAAACAGATATGAGG
EY915290       --> AAGATATATCAGGAACTAGGAAAGTCTTTGTCGAGAAAACAGATATGAGG
EV550507       --> .................................................G

               401    -    451
UN17094        --> GCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- GCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
EV545793       <-- GCCAAGAGAATGGCAAGGAAAGCTGGAGCCCTAGTTATATTCGTGGTTGA
FD531492       <-- ...........................GCCCTGGTTATATTCGTGGTTGA
FD944464       <-- ..................................................
FD935466       <-- ..................................................
FD948714       --> GCCAAGAGAATGGAAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
FD989262       --> GCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
FD535939       --> GCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
FD939312       --> GCAAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
EY915290       --> GCCAAAAGAATGGCAAGGAAAGCTGGAGCCCTGGTTATATTCGTGGTTGA
EV550507       --> GCCAAGAGAAAGGCAAGGAAAGCTGGAGCCCTAGTTATATTCGTGGTTGA

               451    -    501
UN17094        --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
EV545793       <-- CGCAAGTGGCAGCATGGCGTTGAATCGTAT-CAAAACGCCAAAGGTGCTG
FD531492       <-- CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
FD944464       <-- .............................TGCAAAACGCCAAAGGTGCTG
FD935466       <-- ...................................ACGCCAAAGGTGCTG
FD948714       --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
FD989262       --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
FD535939       --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
FD939312       --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
EY915290       --> CGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTG
EV550507       --> CGCAAGTGGCAGCATGGCGTTGAATCGTAT-CAAAACGCCAAAGGTGCTG

               501    -    551
UN17094        --> CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- CACTCAAATTACTGGCAGAGAGCTATACTAGTAGGGATCAGGTTGCGATT  Raphanus raphanistrum subsp. landra
EV545793       <-- CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531492       <-- CACTCAAATTACTGGCAGAGAGCTATACTAGTAGGGATCAGGTTGCGATT  Raphanus raphanistrum subsp. maritimus
FD944464       <-- CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus sativus cv Early Scarlet Globe
FD935466       <-- CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus sativus var. oleiformis
FD948714       --> CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus sativus cv Early Scarlet Globe
FD989262       --> CACTCAAATTACTGGCAGAGAGCTATACTAGTAGGGATCAGGTTGCGATT  Raphanus raphanistrum subsp. landra
FD535939       --> CACTCAAATTACTGGCAGAGAGCTATACTAGTAGGGATCAGGTTGCGATT  Raphanus raphanistrum subsp. maritimus
FD939312       --> CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus sativus var. oleiformis
EY915290       --> CACTCAAATTACTGGCAGAGAGCTA--CTAGTAGGGATCAGGTTGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550507       --> CACTCAAACTGCTTGCAGAGAGCTATACAAGCAGGGATCAGGTAGCGATT  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN17094        --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
EV545793       <-- ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD531492       <-- ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD944464       <-- ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD935466       <-- ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD948714       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD989262       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD535939       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
FD939312       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
EY915290       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC
EV550507       --> ATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATC

               601    -    651
UN17094        --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
EV545793       <-- AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD531492       <-- AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD944464       <-- AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD935466       <-- AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD948714       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD989262       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD535939       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
FD939312       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
EY915290       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT
EV550507       --> AATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTT

               651    -    701
UN17094        --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- CTCCTCTTGCCCATGGTCTAACAACGTCGGTAAGAGTGGGACTTAACGCA
EV545793       <-- CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
FD531492       <-- CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
FD944464       <-- CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
FD935466       <-- CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
FD948714       --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACG..
FD989262       --> CTCCTCTTGCCCATGGTCTAACAACGTCGGTAAGAGTGGGACTTAACGCA
FD535939       --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
FD939312       --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
EY915290       --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA
EV550507       --> CTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTGGGACTTAACGCA

               701    -    751
UN17094        --> GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
EV545793       <-- GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD531492       <-- GAGAAGAGTGGTGACGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD944464       <-- GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD935466       <-- GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD948714       --> ..................................................
FD989262       --> GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD535939       --> GAGAAGAGTGGTGACGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
FD939312       --> GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
EY915290       --> GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG
EV550507       --> GAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGG

               751    -    801
UN17094        --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
EV545793       <-- TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD531492       <-- TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD944464       <-- TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD935466       <-- TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD948714       --> ..................................................
FD989262       --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD535939       --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
FD939312       --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
EY915290       --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC
EV550507       --> TCGAGCCAACATTACGCTGAAAAGATCAACTGATCCAGAGGGTATTGCCC

               801    -    851
UN17094        --> CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. landra
EV545793       <-- CAGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531492       <-- CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. maritimus
FD944464       <-- CAGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus sativus cv Early Scarlet Globe
FD935466       <-- CAGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus sativus var. oleiformis
FD948714       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD989262       --> CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAAGATGAGATTCTGGAA  Raphanus raphanistrum subsp. landra
FD535939       --> CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. maritimus
FD939312       --> CAGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus sativus var. oleiformis
EY915290       --> CCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550507       --> CAGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN17094        --> GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
EV545793       <-- GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
FD531492       <-- GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
FD944464       <-- GTTGCAGGGAAGATATACAAGGCTGAGATGTCTCTACTAGTGATAGATAC
FD935466       <-- GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
FD948714       --> ..................................................
FD989262       --> GTTGCAGGagatat....................................
FD535939       --> GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
FD939312       --> GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
EY915290       --> GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC
EV550507       --> GTTGCAGGGAAGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATAC

               901    -    951
UN17094        --> AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
EV545793       <-- AGAGAACAAGCTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
FD531492       <-- AGAGAACAAGTTTGTCTCAACTGGTTTTTCCAAGGAGATTGCAAGAGTTG
FD944464       <-- AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
FD935466       <-- AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
FD948714       --> ..................................................
FD989262       --> ..................................................
FD535939       --> AGAGAACAAGTTTGTCTCAACTGG..........................
FD939312       --> AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG
EY915290       --> AGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTA
EV550507       --> AGAGAACAAGCTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTG

               951    -   1001
UN17094        --> CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- CTCAAGGAAAATATTATTACTTGCCAAATGCTTCGGATGCAGTCATTTCG
EV545793       <-- CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG
FD531492       <-- CTCAAGGAGAATATTATTACTTGCCAAATGCTTCGGATGCAGTCATCTCG
FD944464       <-- CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG
FD935466       <-- CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG
FD948714       --> ..................................................
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG
EY915290       --> CTCAAGGAAAATATTATTACTTGCCAAATGCTTCGGATGCAGTCATCTCG
EV550507       --> CTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCG

               1001   -   1051
UN17094        --> GCTACCACTAAAGATGCTTTATCAGCTCTGAAGAACTCTTAGACCTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- GCTACAACTAAAGATGCTTTATCAGCTTTGAAGAACTCTTAGACCT-CAC
EV545793       <-- GCTACCACTAAAGATGCTTTATCAGCTTTGAAGAACTCTTAGACCTTCAC
FD531492       <-- GTTACAACTAAAGATGCTTTATCAGCTTTGAAGAACTCTTAGACCT-CAC
FD944464       <-- GCTACCACTAAAGATGCTTTATCAGCTCTGAAGAACTCTTAGACCTTCAC
FD935466       <-- GCTACCACTAAAGATGCTTTATCAGCTCTGAAGAACTCTTAGACCTTCAC
FD948714       --> ..................................................
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> GCTACCACTAAAGATGCTTTATCAGCTCTGA-GAACTCTTAGACCTTC..
EY915290       --> GCTACAACTAAAGATGCTTTACCAGCTCTGAAGAACTCTTAGACCT-CAC
EV550507       --> GCTACCACTAAAGATGCTTTATCAGCTCTGAAGAACTCTTAGACCTTCAC

               1051   -   1101
UN17094        --> TT-TGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTT-GTACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- TTGTCCCTGCAATATTTGGTTTATGATTCCGGTTTACGTTTTTGTACATT
EV545793       <-- TT-TGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTT-GTACATT
FD531492       <-- TTATCCCTGCAATATTTGGTTTATGATTCCGGTTTACGTTTTTGTACATT
FD944464       <-- TT-TGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTT-GTACATT
FD935466       <-- TT-TGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTT-GTACATT
FD948714       --> ..................................................
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> TT-GTCCTGCAATATTTGGTTTATGATTCCGGTTTACGTTTTTGTACATT
EV550507       --> TT-TGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTT-GTACATT

               1101   -   1151
UN17094        --> CTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- TTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
EV545793       <-- CTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
FD531492       <-- CTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
FD944464       <-- CCAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
FD935466       <-- CTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT
FD948714       --> ..................................................
FD989262       --> ..................................................
FD535939       --> ..................................................
FD939312       --> ..................................................
EY915290       --> CTAATTTCCTTTTT-GACCCA-CTAAAC--ACATTTCATTC.........
EV550507       --> CTAATTTCCTTTTTTGACCCAACTAAACCAACATTTCATTCATCAAATAT

               1151   -   1201
UN17094        --> GGAAACGATATAGAGTGAAATGAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD985066       <-- GGAAACGATATAGAGT............
EV545793       <-- GGAAACGATATAGAGcg...........
FD531492       <-- GGAAACGATATAGAGTG...........
FD944464       <-- GGAAACGATATAGAGTGAAATGAAATGT
FD935466       <-- GGAAACGATATAGAGTGAAATGAAATGT
FD948714       --> ............................
FD989262       --> ............................
FD535939       --> ............................
FD939312       --> ............................
EY915290       --> ............................
EV550507       --> GGAAACGATATAGAGcg...........