1      -     51
UN17104        --> GGATTTTACCCAAGAAAAAAAAAAGCCATTACAGCTCTGCT-CATTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> GGATTTTACCCAAGAAAAAAAAAAGCCATTACAGCTCTCCT-C-TTCTTC
EW722402       --> ..........................gATTACAGCTCTCCT-C-TTCTTC
EV534871       --> ..........................ggacagctCTCTTCT-C-TTCTTC
EW715297       --> ..................ggaatacagctctcttCTCTGCT-CATTCTTC
EX762466       --> ..................ggaatacagctctcttCTCTGCT-CATTCTTC
EX762511       --> ......................gacagctctcgtCTCTGCTCCATTCTTC
EY915276       --> .....................ggacagctctcttCTCTGCT-CATTCTTC
EY924714       --> ..............ggaaacaatacagctctcttCTCTGCT-CATTCTTC
FD941852       --> ..................ggaatacagctctcttCTCTGCT-CATTCTTC
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> ..................................................

               51     -    101
UN17104        --> ATCACAACTTCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> GTCACAAATTCTTCAAAAAAGAGACAATCATGGGTAAAGTTCCAGGACTC
EW722402       --> GTCACAAATTCTTCAAAAAAGAGACAATCATGGGTAAAGGTCCAGGACTC
EV534871       --> ATCACAACTTCGTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
EW715297       --> ACCACAACTTCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
EX762466       --> ATCACAACATCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
EX762511       --> ATCACAACTTCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
EY915276       --> ATCACAACATCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
EY924714       --> ACCACAACTTCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
FD941852       --> ACCACAACTTCTTCAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
FY430685       --> .............aAAA---GAGACAATCATGGGTAAAGGTCCAGGACTC
FY437883       --> ................A---GAGACAATCATGGGTAAAGGTCCAGGACTC
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> ..................................................

               101    -    151
UN17104        --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EW722402       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EV534871       --> TACACCGAGATCGGCAAAAAGGCCAAAGATCTTTTGTACAAGGACTACCA
EW715297       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EX762466       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EX762511       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EY915276       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
EY924714       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
FD941852       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
FY430685       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
FY437883       --> TACACCGAGATCGGCAAAAAGGCCAGAGATCTTTTGTACAAGGACTACCA
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> ..................................................

               151    -    201
UN17104        --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- ..................................................  Raphanus sativus var. oleiformis
FD942317       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV539678       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus cv Early Scarlet Globe
EV534871       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGTGTTGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus var. oleiformis
EX762466       --> AGGAGACCAGAAGCTCAGCATCACCACTTACTCTTCAACCGGTGTTGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGTGTTGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> AGGAGACCAGAAGCTCAGCATCACCACTTACTCTTCAACCGGTGTTGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus raphanistrum subsp. landra
FD941852       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus var. oleiformis
FY430685       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus cv GSK3-1
FY437883       --> AGGAGACCAGAAGCTCAGTATCACCACTTACTCTTCAACCGGGGTTGCAA  Raphanus sativus cv GSK3-1
FD577633       --> .................................................g  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN17104        --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EW722402       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EV534871       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EW715297       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EX762466       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EX762511       --> TTACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EY915276       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EY924714       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
FD941852       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
FY430685       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
FY437883       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
FD577633       --> TCACAACAACTGGAACAAACAAGGGAGATTTGTTTGTGGGTGATGTACTT
EY915663       --> ..................................................
FD941942       --> ..................................................

               251    -    301
UN17104        --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- .....AATCAAGAACAAGAACTTAACTGCTGATATCAAAGT-GCCTCTGA
EY911152       <-- ..........AGAACAAGAACTTAACTGCTGATATCAAGGTT-ACTCTGA
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
EW722402       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
EV534871       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTACCTCTGA
EW715297       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTCGCCTCTGA
EX762466       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
EX762511       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
EY915276       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAGGTTACCTCTGA
EY924714       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTCGCCTCTGA
FD941852       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTCGCCTCTGA
FY430685       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
FY437883       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
FD577633       --> ACCCAAATCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
EY915663       --> .......gCAAGAACAAGAACTTAACTGCTGATATCAAAGTTGCCTCTGA
FD941942       --> ..................................................

               301    -    351
UN17104        --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- T-CTTCTATCCTTACCACTGTCAC-TATGATGAGGCTACCCCTGGATTGA
EY911152       <-- TTCTTCTATC-TTACCACTGTCAC-TATGATGAGGCTACCCCTGGATTGA
EX907338       <-- .................CTGTCACCTATGATGAGGCTACCCCTGGATTAA
EX900126       <-- ..............................TGAGGCTACCCCTGGATTGA
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- ..................................................
EX903229       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTAA
EW722402       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
EV534871       --> TTCTTCTATCCTTACCACGGTCACCTATGATGAGGCTACCCCTGGATTGA
EW715297       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
EX762466       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
EX762511       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
EY915276       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
EY924714       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
FD941852       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
FY430685       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
FY437883       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTGA
FD577633       --> TTCTTCTATCCTTACCACTGTCACCTATGATGAGGCTACCCCTGGATTAA
EY915663       --> TTCTTCTATCCTTACCACTGTCACCTATGATGTGGC-CCCCCTGGATTGA
FD941942       --> ..................................................

               351    -    401
UN17104        --> AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- AGGCAATCGTTAGCGCCAAGGTGC-TGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- ............................TCAGAAATCTGCCAAGGTTGAG  Raphanus sativus var. oleiformis
FD942317       <-- ............................TCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- ........................................CAAGGTTGAG  Raphanus raphanistrum subsp. landra
EV539678       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Early Scarlet Globe
EV534871       --> AGGCAATCGTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus var. oleiformis
EX762466       --> AGGCAATCGTTGGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> AGGCAATCGTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. landra
FD941852       --> AGGCAATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus var. oleiformis
FY430685       --> AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv GSK3-1
FY437883       --> AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv GSK3-1
FD577633       --> AGGCTATCCTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> AGGCAATCGTTAGCGCCAAGGTGCCTGATCAGAAATCTGCCAAGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN17104        --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- CTCCAGTATCTGCATCCCCATGCAGGTATCTGTACCAGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- CTCCAGTATCTGCATCCCCACGCAGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus sativus var. oleiformis
FD942317       <-- CTCCAGTATCTGCATTCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- CTCCAGTATCTGCATCCCCACGCAGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus raphanistrum subsp. landra
EV539678       <-- ...............................GCACCAGCGTTGGGTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv Early Scarlet Globe
EV534871       --> CTCCAGTATCTGCATCCCCATGCGGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> CTCCAGTATCTGCATCCCCACGCAGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus sativus var. oleiformis
EX762466       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCGGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGTACCAGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> CTCCAGTATCTGCATCCCCACGCAGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus raphanistrum subsp. landra
FD941852       --> CTCCAGTATCTGCATCCCCACGCAGGTATCTGCACCAGCGTTGGGTTGAC  Raphanus sativus var. oleiformis
FY430685       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv GSK3-1
FY437883       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus sativus cv GSK3-1
FD577633       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGTGTTGGACTGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> CTCCAGTATCTGCATCCCCATGCAGGTATCTGCACCAGCGTTGGACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN17104        --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- -GCTAGCCCCGTTGTCAATTTCTCCGTTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- AGCTAGCCCCGTTGTCAATTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus var. oleiformis
FD942317       <-- AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- AGCTAGCCCCGTTGTCAATTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. landra
EV539678       <-- AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Early Scarlet Globe
EV534871       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> AGCTAGCCCCGTTGTCAATTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus var. oleiformis
EX762466       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> -GCTAGCCCCGTTGTCAATTTCTCCGTTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> AGCTAGCCCCGTTGTCAATTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. landra
FD941852       --> AGCTAGCCCCGTTGTCAATTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus var. oleiformis
FY430685       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv GSK3-1
FY437883       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv GSK3-1
FD577633       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> AGCTAGCCCCGTTGTCAACTTCTCCGGTGTGATTGGAACCAGTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN17104        --> CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- CTCTTGGTACCGATGTCTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- CTCTTGGTACCGATGTGTCCTTTGACACAGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- CTCTTGGTACGGATGTGTCATTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus var. oleiformis
FD942317       <-- CTCTTGGTACCGATGTGTCCTTTGACACAGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- CTCTTGGTACGGATGTGTCATTTGACATGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. landra
EV539678       <-- CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTTAAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> CTCTTGGTACCGATGTGTCCTTTGACACAGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Early Scarlet Globe
EV534871       --> CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTTAAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> CTCTTGGTACGGATGTGTCATTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus var. oleiformis
EX762466       --> CTCTTGGTACCGATGTCTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> CTCTTGGTACCGATGTCTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> CTCTTGGTACGGATGTGTCATTTGACATGGAATCTGGCAACTTCAAACAT  Raphanus raphanistrum subsp. landra
FD941852       --> CTCTTGGTACGGATGTGTCATTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus var. oleiformis
FY430685       --> CTCTTGGTACCGATGTGTCCTTTGACACAGAATCTGGCAACTTCAAACAT  Raphanus sativus cv GSK3-1
FY437883       --> CTCTTGGTACCGATGTGTCCTTTGACACAGAATCTGGCAACTTCAAACAT  Raphanus sativus cv GSK3-1
FD577633       --> CTCTTGGTACCGATGTGTCCTTTGACACGGAATCTGGCAACTTCAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> CTCTTGGTACCGATGTCTCCTTTGACACGGAATCTGACAACTTCAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ..................................................  Raphanus sativus var. oleiformis

               551    -    601
UN17104        --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTTTCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCCCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- TTCAACGCCGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- TTCAACGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus var. oleiformis
FD942317       <-- TTCAACGCCGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- TTCAACGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus raphanistrum subsp. landra
EV539678       <-- TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ..............................................TTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................................................  Raphanus sativus var. oleiformis
EX903229       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> TTCAACGCCGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Early Scarlet Globe
EV534871       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> TTCAACGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus var. oleiformis
EX762466       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCCCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCCCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> TTCAACGCTGGTGTGAGCTTCACCAAG-ATGATTTGATTGCTTCTCTTAC  Raphanus raphanistrum subsp. landra
FD941852       --> TTCAACGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus var. oleiformis
FY430685       --> TTCAACGCCGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv GSK3-1
FY437883       --> TTCAACGCCGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv GSK3-1
FD577633       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCTCTTAC  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> TTCAATGCTGGTGTGAGCTTCACCAAGGATGATTTGATTGCTTCCCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> .................ggaagaataaaaaaaacaatacagcTCTCTTAC  Raphanus sativus var. oleiformis

               601    -    651
UN17104        --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- TTTGAGTGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- TTTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATAGTGA  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus var. oleiformis
FD942317       <-- TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATAGTGA  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. landra
EV539678       <-- TCTGAACGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ..................GAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus var. oleiformis
EX903229       --> TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATAGTGA  Raphanus sativus cv Early Scarlet Globe
EV534871       --> TCTGAACGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus var. oleiformis
EX762466       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> TCTGAGTGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> TCTGAA............................................  Raphanus raphanistrum subsp. landra
FD941852       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus var. oleiformis
FY430685       --> TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATAGTGA  Raphanus sativus cv GSK3-1
FY437883       --> TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATAGTGA  Raphanus sativus cv GSK3-1
FD577633       --> TCTGAACGACAAGGGTGAGAAATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> TCTGAATGACAAAGGTGAGAGATTGAATGCATCGTACTACCACATTGTGA  Raphanus sativus var. oleiformis

               651    -    701
UN17104        --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- ACCCGTTGAAGAACACAGTGGTTAGAGCCGAGGTTAGCCACAGCTTGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTACCCACAGCTTGAAG  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus var. oleiformis
FD942317       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTACCCACAGCTTGAAG  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. landra
EV539678       <-- ACCCATTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- ACCCGTTGAAGAACACAGTGGTTGAAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus var. oleiformis
EX903229       --> ACCCGTTGAAGAACACAGTGGTTAGAGCC.....................  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTACCCACAGCTTGAAG  Raphanus sativus cv Early Scarlet Globe
EV534871       --> ACCCATTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus var. oleiformis
EX762466       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAG-TTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAG-TTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> ..................................................  Raphanus raphanistrum subsp. landra
FD941852       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus var. oleiformis
FY430685       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTACCCACAGCTTGAAG  Raphanus sativus cv GSK3-1
FY437883       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTACCCACAGCTTGAAG  Raphanus sativus cv GSK3-1
FD577633       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> ACCCGTTGAAGAACACAGTGGTTGGAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> ACCCGTTGAAGAACACAGTGGTTGAAGCCGAGGTTAGCCACAGCTTGAAG  Raphanus sativus var. oleiformis

               701    -    751
UN17104        --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- AGCCAAGTGAACACGATAACCGTAGGTGCTCAGCACGCTCTTGACCCATT  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus var. oleiformis
FD942317       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- AGCCAAGTGAACACGATAACCGCGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus raphanistrum subsp. landra
EV539678       <-- AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- AGCCAAGTGAGCACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- AACCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus var. oleiformis
EX903229       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> AGCCAAGTTAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus sativus cv Early Scarlet Globe
EV534871       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus var. oleiformis
EX762466       --> AGCCAAGTGA-CACGATAACCGTGGGTGCTCAGCACGCTCTTGACC-ATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> AGCCAAGTGA-CACGATAACCGTGGGTGCTCAGCACGCTCTt........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTt........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> ..................................................  Raphanus raphanistrum subsp. landra
FD941852       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACC-ATT  Raphanus sativus var. oleiformis
FY430685       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus sativus cv GSK3-1
FY437883       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus sativus cv GSK3-1
FD577633       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> AGCCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTTGACCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> AACCAAGTGAACACGATAACCGTGGGTGCTCAGCACGCTCTGGACCCATT  Raphanus sativus var. oleiformis

               751    -    801
UN17104        --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- GACCACGGTTAAGACACGCGTGAACAATGCTGGTATAGCCAACGCGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- GACCACGGTTAAGACACGCGTGAACAATGCTGGTATAGCCAACGCGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus var. oleiformis
FD942317       <-- GACCACGGTTAAGACACGCGTAAACAATGCCGGTATAGCCAACGCACTGA  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus raphanistrum subsp. landra
EV539678       <-- GACCACGGTTAAGACACGCGTGAACAATGCTGGTATAGCCAACGCGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus var. oleiformis
EX903229       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv Early Scarlet Globe
EV534871       --> GAC...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus var. oleiformis
EX762466       --> GACCACGGT-AAGACACGCGT-GAC-ATGCTGGTATAGCCAcgcgct...  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> ..................................................  Raphanus raphanistrum subsp. landra
FD941852       --> GACCACG-TTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus var. oleiformis
FY430685       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv GSK3-1
FY437883       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv GSK3-1
FD577633       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> GACCACGGTTAAGACACGCGTGAACAATGCTGGTATAGCCAACGCGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> GACCACGGTTAAGACACGCGTAAACAATGCTGGTATAGCCAACGCACTGA  Raphanus sativus var. oleiformis

               801    -    851
UN17104        --> TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911152       <-- TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907338       <-- TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX900126       <-- TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv Early Scarlet Globe
FD937396       <-- TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus var. oleiformis
FD942317       <-- TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATTTCTGG-AGAGGT  Raphanus sativus cv Early Scarlet Globe
EY920327       <-- TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus raphanistrum subsp. landra
EV539678       <-- TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD582278       <-- TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD937465       <-- TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus var. oleiformis
EX903229       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW722402       --> TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv Early Scarlet Globe
EV534871       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715297       --> TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGGGAGA-GT  Raphanus sativus var. oleiformis
EX762466       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762511       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915276       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924714       --> ..................................................  Raphanus raphanistrum subsp. landra
FD941852       --> TCCAACACGAGT......................................  Raphanus sativus var. oleiformis
FY430685       --> TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv GSK3-1
FY437883       --> TCCAACACGAGTGGCGTCCGAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv GSK3-1
FD577633       --> TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY915663       --> TCCAACACGAGTGGCGTCCGAAGTCGTTCA---CCATCTCTGG-AGAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941942       --> TCCAACACGAGTGGCGTCCTAAGTCGTTCATCACCATCTCTGG-AGAGGT  Raphanus sativus var. oleiformis

               851    -    901
UN17104        --> TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EY911152       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EX907338       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EX900126       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
FD937396       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
FD942317       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EY920327       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EV539678       <-- TGACTCTAAGGCCATCGAGAAGAGTGCTAAGGTTGGGTTTGCTCTCGCT.
FD582278       <-- TGACTTTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
FD937465       <-- TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
EX903229       --> ..................................................
EW722402       --> TGACTCTAAG-CCATCGAGA-GAGTGCAAAGGTT................
EV534871       --> ..................................................
EW715297       --> TGACTCTAAG-CCATCGAGAgag...........................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
FY437883       --> TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC
FD577633       --> TGACTCTAAG-CCATCGAGAAGAGTGCAAAGGTTGG..............
EY915663       --> TGACTCT...........................................
FD941942       --> TGACTCTAAGGCCATCGAGAAGAGTGCAAAGGTTGGGTTTGCTCTCGCTC

               901    -    951
UN17104        --> TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCTCTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- TCAAGCCTTGAGCCACTGTttttt..........................
EY911152       <-- TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGATCTAATCTCTGTCTG
EX907338       <-- TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCTCTGTCTT
EX900126       <-- TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCTCTGTCTG
FD937396       <-- TCAAGCCTTGAGCCACTGTTTTCTAATCTTTTGGAACTAATCTCTGTCTG
FD942317       <-- TCAAGCCTTGAGCCACTGTtt.............................
EY920327       <-- TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCACTGTCTG
EV539678       <-- ..................................................
FD582278       <-- TCAAGCCTTGAGCCACTGTTTTTTAATCTTTTGGAACTAATTTCTGTCTT
FD937465       <-- TCAAGCCTTGAGCCACTGTTTTCTAATCTTTTGGAACTAATCTCTGTCTG
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCTCTGT...
FY437883       --> TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAAC.............
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> TCAAGCCTTGAGCCACTGTCTTCTAATCTTTTGGAACTAATCTCTGTCTG

               951    -   1001
UN17104        --> GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTTTACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTT-ACAAA
EX907338       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTT-ACAAA
EX900126       <-- GTTTTTTTT-CCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTT-ACAAA
FD937396       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTCCTTTTTTTAC...
FD942317       <-- ..................................................
EY920327       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTTTACAAA
EV539678       <-- ..................................................
FD582278       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTT-ACAAA
FD937465       <-- GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTTTACAAA
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> GTTTTTTTTTCCCCTTTAAAAATTGTTCATTTGTTTTCTTTTTTTACAAA

               1001   -   1051
UN17104        --> ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAAGATGA
EX907338       <-- ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAgg....
EX900126       <-- ATAAGAAGAAGAAAAATAAAAACCTATGAAAGGATCGTCTTTGAAGATGA
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ATAAGAAGAAGAAAAATAGAATACTATGAAAGGATCGTCTTTGAAGATGA
EV539678       <-- ..................................................
FD582278       <-- ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAAGATGA
FD937465       <-- ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAAGATGA
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> ATAAGAAGAAGAAAAATAAAATACTATGAAAGGATCGTCTTTGAAGATGA

               1051   -   1101
UN17104        --> ACCATACAAGTCTCTTTCTTGATTATTTGCCTCTCTAGTTCTCTCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- tgaaccatacaa......................................
EX907338       <-- ..................................................
EX900126       <-- ACCATACAAGTCTCTTTCTTGATT..........................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ACCATACAAGTCTCTTTCTTGATTATTTGCCTCTCTAGTct.........
EV539678       <-- ..................................................
FD582278       <-- ACCATACAAGTCTCTTTCTTGATTATTTGCCTCTCTAGTTCTCTCTTGGT
FD937465       <-- ACCATACAAGCCTCTTTCTTGATTATTTGCCTCTCTAGTTCTCTCTTGGT
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> ACCATACAAGCCTCTTTCTTGATTATTTGCCTCTCTAGTTCTCTCTTGGT

               1101   -   1151
UN17104        --> CTCTTGATTTATTTGATTGGTGGCAGAAGATCTGACTTCGTTCTCAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- CTCTTGATTTATTTGATTGGTGGCAGAAGATCTGACTTCGTTCTCAATC.
FD937465       <-- CTCTTGATTTATTTGATTGGTGGCAGAAGATCTGACTTCGTTCTCAATCT
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> CTCTTGATTTATTTGATTGGTGGCAGAAGATCTGACTTCGTTCTCAATCT

               1151   -   1201
UN17104        --> GTTTCAGTTCATTACTTTGTTTTGTTATGCTATGGCCTTGTGCTTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ..................................................
EY911152       <-- ..................................................
EX907338       <-- ..................................................
EX900126       <-- ..................................................
FD937396       <-- ..................................................
FD942317       <-- ..................................................
EY920327       <-- ..................................................
EV539678       <-- ..................................................
FD582278       <-- ..................................................
FD937465       <-- GTTTCAGTTCATTACTTTGTTTTGTTATGCTATGGCCTTGTGCTTGCTCA
EX903229       --> ..................................................
EW722402       --> ..................................................
EV534871       --> ..................................................
EW715297       --> ..................................................
EX762466       --> ..................................................
EX762511       --> ..................................................
EY915276       --> ..................................................
EY924714       --> ..................................................
FD941852       --> ..................................................
FY430685       --> ..................................................
FY437883       --> ..................................................
FD577633       --> ..................................................
EY915663       --> ..................................................
FD941942       --> GTTTCAGTTCATTACTTTGTTTTGTTATGCTATGGCCTTGTGCTTGCTCA

               1201   -   1251
UN17104        --> CACTTGGGTCACAAGTTCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~
EX766746       <-- ......................
EY911152       <-- ......................
EX907338       <-- ......................
EX900126       <-- ......................
FD937396       <-- ......................
FD942317       <-- ......................
EY920327       <-- ......................
EV539678       <-- ......................
FD582278       <-- ......................
FD937465       <-- CACTTGGGTCACAAGTTCAATA
EX903229       --> ......................
EW722402       --> ......................
EV534871       --> ......................
EW715297       --> ......................
EX762466       --> ......................
EX762511       --> ......................
EY915276       --> ......................
EY924714       --> ......................
FD941852       --> ......................
FY430685       --> ......................
FY437883       --> ......................
FD577633       --> ......................
EY915663       --> ......................
FD941942       --> CACTTGGGTCACAAGTTCAATA