1      -     51
UN17111        --> GCATCTAAAGAAGATTGAGAATAACCACTATTACTCTCTCCTTAGTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ..................................................
EY939436       <-- ..................................................
EX764452       <-- ..................................................
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> GCATCTAAAGAAGATTGAGAATAACCACTATTACTCTCTCCTTAGTTCAC

               51     -    101
UN17111        --> ATGTTTTTTTGTACGATCTTAAGGATGAACACTATAAAATGTAGAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ..................................................
EY939436       <-- ..................................................
EX764452       <-- ..................................................
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> ATGTTTTTTTGTACGATCTTAAGGATGAACACTATAAAATGTAGAGTTTT

               101    -    151
UN17111        --> AAAAAAAATTATAAAAATGTAAAATACAAAGGGAGGGATTTAGGTTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ..................................................
EY939436       <-- ..................................................
EX764452       <-- ..................................................
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> AAAAAAAATTATAAAAATGTAAAATACAAAGGGAGGGATTTAGGTTCTGG

               151    -    201
UN17111        --> ACTTGCTGCTCATACTCATCAGTGCCTTGAGCATCAGACTCTTCTTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- .............................AGCATCAGACTCCTCT-CCCC
EY939436       <-- ..................................................
EX764452       <-- ..................................................
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> ACTTGCTGCTCATACTCATCAGTGCCTTGAGCATCAGACTCTTCTTCCCC

               201    -    251
UN17111        --> TTTCTCAATGAAGATTTTTGCTTTATCTCCACTATC-TCTCTACTTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TTTCTCAATGAAGATTTTTGCTTTATCTCCACTATC-TCTCTACTTGTCG
EY939436       <-- ..............aTTTTGCTTTATCTCCACTATCCTCTCTACT-GTCG
EX764452       <-- ..................................................
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> TTTCTCAATGAAGATTTTTGCTTTATCTCCACTATC-TCTCTACTTGTGG

               251    -    301
UN17111        --> ACAAAGATATCGCTCTTTCTGGTTCCGGTAACAACGCC-AGTATTCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ATAAAGATATCGCTCTTTCTGGTTCCGGTAACAACGCCCAGTATTCTTGG
EY939436       <-- ACAAAGATAT-GCTCTCTCTGGTTCCGGTAACAACGCC-AGTATTCT-GG
EX764452       <-- ...........GCTCTTTCT--GTCC-GTAACAACGCC-AGTATTCT-GG
FD978149       <-- ..................................................
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> ACAAAGATATCGCTCTTTCTGGTTCCGGTAACAACGCC-AGTATTCTTGG

               301    -    351
UN17111        --> CTG-CC-TGGAGAGCTTGAGTGTTTCAGTTGAGATCCTGAACGTAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- CTG-CCCTGGAGAGCTTGAGTGTTTCAGTTGAGATCCTGAACGTAAGAGA
EY939436       <-- CTG-CC-TGGAGAGCTTGAGTGTT-CAGTTGAGATC-TGAACGTAAGAGA
EX764452       <-- CTG-CC-TG-AGAGCTTGAGTGTT-CAGTTGAGATCCTGAACGTAAGAGA
FD978149       <-- .............................................AGAGA
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> CTGGCC-TGGAGAGCTTGAGTGTTTCAGTTGAGATCCTGAACGTAAGAGA

               351    -    401
UN17111        --> GGAAACCTCAGAGGAGAGTTTCCTCTTTTACTGTTTGGTGTTCTGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- GGAAACCTCAGAGGAGAGTTTCCTCTTTTACTGTTTGGTGTTCTGTTGTT
EY939436       <-- GGAAAC-TCAGAGGAGAGTTTCCTCTTTTACTGTTTGGTGTTCTGTTGTT
EX764452       <-- GGAAAC-TCAGAGGAGAGTTTCCTCTTTTACTGTTTGGTGTTCTGTTGTT
FD978149       <-- GGAA-CCTCAGAGGAGAGTT-CCTCTTTTACTGTTTGGTGTTCTGTTGTT
FD949212       <-- ......................................TGTTCTGTTGTT
EX757076       <-- .......................................GTTCTGTTGTT
EX898492       <-- ..................................................
FD974453       --> GGAAACCTCAGAGGAGAGTTTCCTCTTTTACTGTTTGGTGTTCTGTTGTT

               401    -    451
UN17111        --> GCTGATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- GCTCATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATACGCTTTTC  Raphanus raphanistrum subsp. landra
EY939436       <-- GCTCATGTTGTTATGTAAAAAAGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- GCTGATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- GCTGATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- GCTCATGTTGTTATGTAAAAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- GCTGATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974453       --> GCTGATGTTGTTATGTAAGAAGGAGAAGCTTCCTGTCTTATAAGCTTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN17111        --> TTGCAGTAGTACTTGCGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TTGCAGTAGTACTTGTGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus raphanistrum subsp. landra
EY939436       <-- TTGCAGTAGTACTTGTGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- TTGCAGTAGTACTTGCGTGTTTTTCTAGTATTGTTGATCGAACAGCGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- TTGCAGTAGTACTTGCGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- TTGCAGTAGTACTTGTGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- TTGCAGTAGTACTTGCGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- ...................TTTTTCTAGTATTGTTGATCGAA-AGCACTC  Raphanus sativus cv Early Scarlet Globe
FD974453       --> TTGCAGTAGTACTTGCGTGTTTTTCTAGTATTGTTGATCGAACAGCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN17111        --> TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG  Raphanus raphanistrum subsp. landra
EY939436       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAAAAACTTGTGCCTCTTCCACG  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- TTGAACATATGCGAGTCATCTCCTGCGGAAAAACTTGTGCCTCTTCCACG  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- TTGAACCTATGCGAGTCATCTCCTGCGGAAAAACTTGTGCCTCTTCCACG  Raphanus sativus cv Early Scarlet Globe
FD974453       --> TTGAACCTATGCGAGTCATCTCCTGCGGAGAAACTTGTGCCTCTTCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN17111        --> TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG  Raphanus raphanistrum subsp. landra
EY939436       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGGTTATGATGGTGAGGAG  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGGTTATGATGGTGAGGAG  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGGTTATGATGGTGAGGAG  Raphanus sativus cv Early Scarlet Globe
FD974453       --> TTCACCTCTTCCATGTTGAGGGAAGAAGTAACGCTTATGATGGTGAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN17111        --> GAGATTGAATGAGAAAGGAATGATGAGAAGTCCCACTTTTCCCCATGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- AAGATTGAATGAGAAAGGAATGATGAGAACTCCCACTTTTCCCCATGTAC  Raphanus raphanistrum subsp. landra
EY939436       <-- GAGATTGAATGAGAAAGCAATGATGAGAGGTCCCACTTTTCCCCATGTAC  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- GAGATTGAATGAGAAAGGAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- GAGATTGAATGAGAAAGGAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- GAGATTGAATGAGAAAGCAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- GAGATTGAATGAGAAAGGAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- GAGATTGAATGAGAAAGCAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus sativus cv Early Scarlet Globe
FD974453       --> GAGATTGAATGAGAAAGGAATGATGAGAAGTCCCACTTTTCCCCATGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN17111        --> TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
EY939436       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
EX764452       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
FD978149       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
FD949212       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
EX757076       <-- TCTCTGCACAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
EX898492       <-- TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT
FD974453       --> TCTCTGCATAGTTTCATCCTTTGTTCGAGAGAAGACAAACGAAGATGAGT

               701    -    751
UN17111        --> GGTGGAGAAATGGGTTGAGTTATCAGAGAGAAAAGAGTTGAATTTATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- GGTGGAGAAATGGGTTGAGTTATCAGAGAGAAAAGAGTTGAATTTATCAG  Raphanus raphanistrum subsp. landra
EY939436       <-- GGTGGAGAAATGGGCTGAGTTATCAGAGAGAAAACAGTTGAATTTATCAG  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- GGTGGAGAAATGGGTTGAGTTATCAGAGAGAAAAGAGTTGAATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- GGTGGAGAAATGGGTTGAGTTATCAGAGAGAAAAGAGTTGAATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- GGTGGAGAAATGGGCTGAGTTATCAGAGAGAAAACAGCTGAATTTATCAG  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- GGTGGAGAAATGGGATGAGTTATCAGAGAGAAAAGTGTTGAATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- GGTGGAGAAATGGGCTGAGTTATCAGAGAGAAAACAGTTGAATTTATCAG  Raphanus sativus cv Early Scarlet Globe
FD974453       --> GGTGGAGAAATGGGTTGAGTTATCAGAGAGAAAAGAGTT...........  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN17111        --> AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGCATAC  Raphanus raphanistrum subsp. landra
EY939436       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGTATAC  Raphanus sativus cv Early Scarlet Globe
EX764452       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGCATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978149       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGCATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949212       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGTATAC  Raphanus sativus cv Early Scarlet Globe
EX757076       <-- AGACAGAGCCAAGATGATCC..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898492       <-- AGACAGAGCCAAGATGATCCACTGTGTTCACTACTGCCTTGGCTGTATAC  Raphanus sativus cv Early Scarlet Globe
FD974453       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN17111        --> TCTTTCAACGTCTCGATCACCGTTTCTTTGTGTTCTTCTTTGCCATAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGTTATTCTTTGCCGTAAGA
EY939436       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGTTCTTCTTTGCCATAAGA
EX764452       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGCTCTTCTTTGCCATAAGA
FD978149       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGCTCTTCTTTGCCATAAGA
FD949212       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGTTCTTCTTTGCCATAAGA
EX757076       <-- ..................................................
EX898492       <-- TCTTTCAACGTCTCGATCACCGTTTCTTTGTGTTCTTCTTTGCCATAAGA
FD974453       --> ..................................................

               851    -    901
UN17111        --> TGTTTCGAAGTACTCAGCAGCTGAGTATAACTGTTTCCGCAAGTTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TGTTTCGAAGTACTCAGCAGCTGAGTATAACTGTTTTCGCAAGTTCTTTA
EY939436       <-- TGTTTCGAAGTACTCAGCAGCTGAGTATAACTGTTTCCGCAAGTTCTTTA
EX764452       <-- TGTTTCGAAGTACTCAGCAGCTGAGTATAATTGTTTCCGTAAGTTCTTTA
FD978149       <-- TGTTTCGAAGTACTCAGCAGCTGAGTATAATTGTTTCCGCAAGTTCTTTA
FD949212       <-- TG................................................
EX757076       <-- ..................................................
EX898492       <-- TGTTTCGAAGTACTCAGCAGCTGAGTATAACTGTTTCCGCAAGTTCTTTA
FD974453       --> ..................................................

               901    -    951
UN17111        --> AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
EY939436       <-- AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
EX764452       <-- AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
FD978149       <-- AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- AATCCTTGAGAGTTTGTGAGAATTGAAGAGTCTGCTGCATGAAGAGTTCG
FD974453       --> ..................................................

               951    -   1001
UN17111        --> TCATGATTGGCAGACTGATGAAGAACGATGGCTAAAGATGTAGAGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- TCATGATTGGCAGACTGATGAAGAACGATGGCTAAAGATGTAGAGCTCTC
EY939436       <-- TCATGATTGGCTGACTGATGAAGAACGATGGCTAAAGATGTAGAGCTCTC
EX764452       <-- TCATGATTGGCAGACTGATGAAGAACGATGGCTAAAGATGTAGAGCTCTC
FD978149       <-- TCATGATTGGCAGACTGATGAAGAACGATGGCTAAAGATGTAGAGCTCTC
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- TCATGATTGGCTGACTGATGAAGAACGATGGCTAAAGATcc.........
FD974453       --> ..................................................

               1001   -   1051
UN17111        --> CATTTGTGTTCTGATTTAATTAATGAGAGGAAGATAATGGAGTGAGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ..................................................
EY939436       <-- CATTTGTGTTCTGATTTAATTcc...........................
EX764452       <-- CATTTGTGTTCTcccccggccgtaac........................
FD978149       <-- CATTTGTGTTCTGATTGAATTAATGAGAGGAAGATAATGGAGTGAGTAAG
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> ..................................................

               1051   -   1101
UN17111        --> TAAGAGAGATAGAGATCCAAGTGGAGCCACTGCAGAACTCTTTAACACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566539       <-- ..................................................
EY939436       <-- ..................................................
EX764452       <-- ..................................................
FD978149       <-- TAAGAGAGATAGAGATCCAAGTGGAGCCACTGCAGAACTCTTTAACACAA
FD949212       <-- ..................................................
EX757076       <-- ..................................................
EX898492       <-- ..................................................
FD974453       --> ..................................................

               1101   -   1151
UN17111        --> TATTCGATCCATCC
                   ~~~~~~~~~~~~~~
EV566539       <-- ..............
EY939436       <-- ..............
EX764452       <-- ..............
FD978149       <-- TATTCGATCCATCC
FD949212       <-- ..............
EX757076       <-- ..............
EX898492       <-- ..............
FD974453       --> ..............