RadishBase

| | | |
Alignment for radish unigene UN17119

               1      -     51
UN17119        --> GGACGAAAAAAAAAGACGAAAGGAAATCAAAAGAGAGGTTAATGGAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ..................................................
FD953583       <-- ..................................................
FD573936       <-- ..................................................
FD942536       <-- ..................................................
FD581876       <-- ..................................................
FD953559       <-- ..................................................
FD957994       --> GGACGAAAAAAAAAGACGAAATCAAATCAAAAGAGAGGTTAATGGAGCGA
EY924272       --> .....................GGAAATTAAAAGAGAGGT-AATGGAGCGA
EY924509       --> .....................GGAAATTAAAAGAGAGGT-AATGGAGCGA
EY945901       --> .....................GGAAATCAAAAGAGAGGTTAATGGAGCGA
FD577599       --> .....................GGAAATCAAAAGAGAGGTTAATGGAGCGA
FD946408       --> ....................ggaAAATCAAAAGAGAGGTTAATGGAGCGA
FY434330       --> ..................................................
FY436529       --> ..................................................
FY436903       --> ..................................................
FY434284       --> ..................................................
FD957960       --> ..................................................

               51     -    101
UN17119        --> TCAAGCGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ..................................................
FD953583       <-- ..................................................
FD573936       <-- ..................................................
FD942536       <-- ..................................................
FD581876       <-- ..................................................
FD953559       <-- ..................................................
FD957994       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
EY924272       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTTCTCTCTTGGTCCCAGAT
EY924509       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTTCTCTCTTGGTCCCAGAT
EY945901       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
FD577599       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
FD946408       --> TCAAGCGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
FY434330       --> ....GCGATCCCCATCACTC-ACCGCCGATCTCCTCTCTTGGTCCCAGAT
FY436529       --> ....GCGATCCCCATCACTCC-CCGCCGATCTCCTCTCTTGGTCCCAGAT
FY436903       --> .....CGATCCCCATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
FY434284       --> ............CATCACTCCACCGCCGATCTCCTCTCTTGGTCCCAGAT
FD957960       --> ..................................................

               101    -    151
UN17119        --> CCACCACTCCTCCGCCGCTAATCCCTCCAACCAGCCGTCTGATGACATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD953583       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> CCACCACTCCTCCGCCGCTAATCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> CCACCACTCCTCCGCCAATAATCCCTCCAACCAGAATTCTGATGACATCG  Raphanus raphanistrum subsp. landra
EY924509       --> CCACCACTCCTCCGCCAATAATCCCTCCAACCAGAATTCTGATGACATCG  Raphanus raphanistrum subsp. landra
EY945901       --> CCATCACTCCTCCGCCGCTAATCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> CCACCACTCCTCCGCCGCTAATCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> CCACCACTCCTCCGCCGCTAATCCCTCCGACCAGCCGTCTGATGACATCG  Raphanus sativus cv Early Scarlet Globe
FY434330       --> CCACCACTCCTCCTCCGCTAACCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv GSK3-1
FY436529       --> CCACCACTCCTCCTCCGCTAACCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv GSK3-1
FY436903       --> CCACCACTCCTCCTCCGCTAACCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv GSK3-1
FY434284       --> CCACCACTCCTCCTCCGCTAACCCCTCCAACCAGCCGTCTGATGACATCG  Raphanus sativus cv GSK3-1
FD957960       --> ..............................CCAGCCGTCTGATGACATCG  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN17119        --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- .............CGGTGGTGGTAGAACCACCAACAAGGAAGCTGAATCG
FD953583       <-- ..................................................
FD573936       <-- ..................................................
FD942536       <-- ..................................................
FD581876       <-- ..................................................
FD953559       <-- ..................................................
FD957994       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
EY924272       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCTGAATCG
EY924509       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCTGAATCG
EY945901       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FD577599       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FD946408       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FY434330       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FY436529       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FY436903       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FY434284       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG
FD957960       --> GCGACGTCCTTGGCGGTGGTGGTAGAACCACCAACAAGGAAGCCGAATCG

               201    -    251
UN17119        --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus raphanistrum subsp. landra
FD953583       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus raphanistrum subsp. landra
EY924509       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus raphanistrum subsp. landra
EY945901       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus sativus cv Early Scarlet Globe
FY434330       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTGTGGTCACAAGCTAAA  Raphanus sativus cv GSK3-1
FY436529       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTGTGGTCACAAGCTAAA  Raphanus sativus cv GSK3-1
FY436903       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTGTGGTCACAAGCTAAA  Raphanus sativus cv GSK3-1
FY434284       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTGTGGTCACAAGCTAAA  Raphanus sativus cv GSK3-1
FD957960       --> CTTAACAAGAATGTATCATACAGGAAGAACTGTTCTGGTCACAAGCTAAA  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN17119        --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FD953583       <-- ..............GTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FD573936       <-- ..................................................
FD942536       <-- ..................................................
FD581876       <-- ..................................................
FD953559       <-- ..................................................
FD957994       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
EY924272       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
EY924509       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
EY945901       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FD577599       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FD946408       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FY434330       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FY436529       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FY436903       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FY434284       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA
FD957960       --> GGAAATGACTGGTAGTGATATCTTCTCTGATAATGGTAACGTTACTAACA

               301    -    351
UN17119        --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FD953583       <-- ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FD573936       <-- ..................................................
FD942536       <-- ..................................................
FD581876       <-- ..................................................
FD953559       <-- ..................................................
FD957994       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
EY924272       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
EY924509       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
EY945901       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGTAT
FD577599       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FD946408       --> ATGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FY434330       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FY436529       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FY436903       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FY434284       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT
FD957960       --> ACGCTTATCCAAGCCACACTTCAAGAATCCATTACCATCATGATCAGGAT

               351    -    401
UN17119        --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus raphanistrum subsp. landra
FD953583       <-- AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- ............TTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus raphanistrum subsp. landra
EY924509       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus raphanistrum subsp. landra
EY945901       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACA...................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGACGAC  Raphanus sativus cv Early Scarlet Globe
FY434330       --> AGTCAGATATCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGAC---  Raphanus sativus cv GSK3-1
FY436529       --> AGTCAGATATCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGAC---  Raphanus sativus cv GSK3-1
FY436903       --> AGTCAGATATCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGAC---  Raphanus sativus cv GSK3-1
FY434284       --> AGTCAGATATCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGACGAC---  Raphanus sativus cv GSK3-1
FD957960       --> AGTCAGATCTCTTTCAGCGGCGGCGAAGACAACGCTGCTGTGA.......  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN17119        --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus raphanistrum subsp. landra
FD953583       <-- TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- ......................TCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus raphanistrum subsp. landra
EY924509       --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus raphanistrum subsp. landra
EY945901       --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> TCCTAAGAAACCTACAACCTCTTCTCCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv Early Scarlet Globe
FY434330       --> TCCTAAGAAACCTACAACCTCTTCTGCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv GSK3-1
FY436529       --> TCCTAAGAAACCTACAACCTCTTCTGCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv GSK3-1
FY436903       --> TCCTAAGAAACCTACAACCTCTTCTGCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv GSK3-1
FY434284       --> TCCTAAGAAACCTACAACCTCTTCTGCTAAGCTTAAGGAGTTGGGCAGGT  Raphanus sativus cv GSK3-1
FD957960       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN17119        --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus raphanistrum subsp. landra
FD953583       <-- CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus raphanistrum subsp. landra
EY924509       --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus raphanistrum subsp. landra
EY945901       --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCG  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> CTGTAGAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv Early Scarlet Globe
FY434330       --> CTGTACAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv GSK3-1
FY436529       --> CTGTACAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv GSK3-1
FY436903       --> CTGTACAAACACAGGCTGACTCCAgagc......................  Raphanus sativus cv GSK3-1
FY434284       --> CTGTACAAACACAGGCTGACTCCAAGAGCAAAAAGAAGCAGAGCAAAGCA  Raphanus sativus cv GSK3-1
FD957960       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN17119        --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD953583       <-- ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD573936       <-- ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD942536       <-- ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD581876       <-- .................TTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD953559       <-- .........................CTGCAATAAAACAACAAGTTAAAGG
FD957994       --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
EY924272       --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
EY924509       --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
EY945901       --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD577599       --> ..................................................
FD946408       --> ATCACCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FY434330       --> ACCATCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FY436529       --> ACCATCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FY436903       --> ..................................................
FY434284       --> ACCATCTTTGCATCTCCTTCTCCTCCTGCAATAAAACAACAAGTTAAAGG
FD957960       --> ..................................................

               551    -    601
UN17119        --> AAACAACA---TGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- AAACAACA---CGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD953583       <-- AAACAACA---TGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD573936       <-- AAACAACA---TGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD942536       <-- AAACAACA---TGGAGGAATCTACTAAAGCCTCCAATGGGCAAAGCCGTA
FD581876       <-- AAACAACA---TGAAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD953559       <-- AAACAACA---TGGAGGAATTTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD957994       --> AAACAACA---TGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
EY924272       --> AAACAACA---CGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
EY924509       --> AAACAACA---CGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
EY945901       --> AAACAACA---TGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD577599       --> ..................................................
FD946408       --> AAACAACA---TGGAGGAATCTACTAAAGCCTCCAATGGGCAAAGCCGTA
FY434330       --> AAACAACAACATGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FY436529       --> AAACAACAACATGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FY436903       --> ..................................................
FY434284       --> AAACAACAACATGGAGGAATCTGCTAAAGCCTCCAATGGGCAAAGCCGTA
FD957960       --> ..................................................

               601    -    651
UN17119        --> ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus raphanistrum subsp. landra
FD953583       <-- ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACGACCCC  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- ACGGTGAAGAACATGTTGTGAAGTCCTCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> ACGGTGAAGAACATGTTGTGAAGTCC........................  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus raphanistrum subsp. landra
EY924509       --> ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus raphanistrum subsp. landra
EY945901       --> ACGGTGAAGAACATGTTGTGAAGTCC........................  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> ACGGTGAAGAACATGTTGTGAAGTCC........................  Raphanus sativus cv Early Scarlet Globe
FY434330       --> ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv GSK3-1
FY436529       --> ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv GSK3-1
FY436903       --> ..................................................  Raphanus sativus cv GSK3-1
FY434284       --> ACGGTGAAGAACATGTTGTGAAGTCATCAGGGAAGGGACACAACAACCCC  Raphanus sativus cv GSK3-1
FD957960       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN17119        --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAGGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAGGTCCC  Raphanus raphanistrum subsp. landra
FD953583       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCTGATAAGGTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCTGATAAGGTCCC  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCTGATAAGGTCCC  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCTGATAAGGTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCTGATAAGGTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAG-TCCC  Raphanus raphanistrum subsp. landra
EY924509       --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAG-TCCC  Raphanus raphanistrum subsp. landra
EY945901       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY434330       --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAGGTCCC  Raphanus sativus cv GSK3-1
FY436529       --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAGGTCCC  Raphanus sativus cv GSK3-1
FY436903       --> ..................................................  Raphanus sativus cv GSK3-1
FY434284       --> AAGTTTCAGCAACTCACGAGCAACGGTATCTTCAAATCCGATAAGGTCCC  Raphanus sativus cv GSK3-1
FD957960       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN17119        --> TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCAGCTAAATCGCGGGAGATGA
FD953583       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD573936       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD942536       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD581876       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD953559       <-- TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD957994       --> ..................................................
EY924272       --> TCCTGGCTA.........................................
EY924509       --> TCCTGGCTATTCGGAGA-GATGCACAGCTCAGCTAA-TCGCGGGAGATGA
EY945901       --> ..................................................
FD577599       --> ..................................................
FD946408       --> ..................................................
FY434330       --> TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FY436529       --> TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FY436903       --> ..................................................
FY434284       --> TCCTGGCTATTCGGAGAAGATGCACAGCTCGGCTAAATCGCGGGAGATGA
FD957960       --> ..................................................

               751    -    801
UN17119        --> GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD953583       <-- GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD573936       <-- GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD942536       <-- GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD581876       <-- GGGGGAACAATATATTTGCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD953559       <-- GGGGGAACAATATATTTGCAGACGGCAAGTTTGAGTATAGGGATTACTAT
FD957994       --> ..................................................
EY924272       --> ..................................................
EY924509       --> GGGG--AC-ATATATTTGCAGACG-C-AGTCTGAGTAT............
EY945901       --> ..................................................
FD577599       --> ..................................................
FD946408       --> ..................................................
FY434330       --> GGGGAAACAATATATTTTCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FY436529       --> GGGGAAACAATATATTTTCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FY436903       --> ..................................................
FY434284       --> GGGGAAACAATATATTTTCAGACGGCAAGTCTGAGTATAGGGATTACTAT
FD957960       --> ..................................................

               801    -    851
UN17119        --> GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGGTCTA
FD953583       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGGTCTA
FD573936       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGGTCTA
FD942536       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGGGCAGCATTTCGTTGGTCTA
FD581876       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGGTCTA
FD953559       <-- GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTTGTTGGTCTA
FD957994       --> ..................................................
EY924272       --> ..................................................
EY924509       --> ..................................................
EY945901       --> ..................................................
FD577599       --> ..................................................
FD946408       --> ..................................................
FY434330       --> GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGATCTA
FY436529       --> GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGATCTA
FY436903       --> ..................................................
FY434284       --> GGTGGCGCCAGGAGGCCTCCGGGTGGTGAGAGCAGCATTTCGTTGATCTA
FD957960       --> ..................................................

               851    -    901
UN17119        --> AAAATGAGTTC-AAGTTTTAGGTTTCGTAGGGTTCTAGTTTTTCCTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- AAAATGAGTTCCAAGTTTTAGGTTTCGTAGGGTTCTAGTTTT-CCTAAAG  Raphanus raphanistrum subsp. landra
FD953583       <-- AAAATGAGTTC-AAGTTCTAGGTTTCGTAGGGTTCTAGTTTTTCCTAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD573936       <-- AAAATGAGTTC-AAGTTTTAGGTTTCGTAGGGTTCTAGTTTTTCCTAATG  Raphanus sativus cv Early Scarlet Globe
FD942536       <-- AAAATGAGTTC-AAGTTCTAGGTTTCGTAGGGTTCTAGTTTTTCCTAATG  Raphanus sativus cv Early Scarlet Globe
FD581876       <-- AAAATGAGTTC-AAGTTCTAGGTTTCGTAGGGTTCTAGTTTTTCCTAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD953559       <-- AAAA..............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD957994       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY924272       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924509       --> ..................................................  Raphanus raphanistrum subsp. landra
EY945901       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD577599       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946408       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY434330       --> AAAATGAGTTCCAAGTTTTAGGTTTCGTAGGGTTCTAGTTTT-CCTAAAG  Raphanus sativus cv GSK3-1
FY436529       --> AAAATGAGTTCCAAGTTTTAGGTTTCGTAGGGTTCTAGTTTT-CCTAAAG  Raphanus sativus cv GSK3-1
FY436903       --> ..................................................  Raphanus sativus cv GSK3-1
FY434284       --> ATAATGAGTTCCGAGTTTTAGGTTTCGTAGGGGTCTAGTTTT-CCTAAAG  Raphanus sativus cv GSK3-1
FD957960       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               901    -    951
UN17119        --> ATGCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTGTGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- ATTCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTATGGTCT
FD953583       <-- ATTCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTGTGGTCT
FD573936       <-- ATGCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTGTGGTCT
FD942536       <-- ATGCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTGTGGTCT
FD581876       <-- ATGCTGTGACCAAAGTGGTTTGTGTTCGTGTGGTGTCTCGACTGTGGTCT
FD953559       <-- ..................................................
FD957994       --> ..................................................
EY924272       --> ..................................................
EY924509       --> ..................................................
EY945901       --> ..................................................
FD577599       --> ..................................................
FD946408       --> ..................................................
FY434330       --> ATGCTGTGACCAAA....................................
FY436529       --> ATGCTGTGACCAAAGTGGTTT.............................
FY436903       --> ..................................................
FY434284       --> ATGCTGTGA.........................................
FD957960       --> ..................................................

               951    -   1001
UN17119        --> CATTTTATAATATAAAACGTACGCCTTTTGTAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920147       <-- CATTTTATAATATAAAACGTACGCCTTTTGc.....
FD953583       <-- CATTTTATAATATAAAACGTACGCCTTTTGT.....
FD573936       <-- CATTTTATAATATAAAACGTACGCCTTTTGTAGTT.
FD942536       <-- CATTTTATAATATAAAACGTACGCCTTTTGTAGTcc
FD581876       <-- CATTTTATAATATAAAACGTACCCCTTTTGTAGTTC
FD953559       <-- ....................................
FD957994       --> ....................................
EY924272       --> ....................................
EY924509       --> ....................................
EY945901       --> ....................................
FD577599       --> ....................................
FD946408       --> ....................................
FY434330       --> ....................................
FY436529       --> ....................................
FY436903       --> ....................................
FY434284       --> ....................................
FD957960       --> ....................................