RadishBase

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Alignment for radish unigene UN17128

               1      -     51
UN17128        --> AGACCAATTTCGACTTTCTCCATGTGTGTATATTGTACACGGAAATAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> AGACCAATTTCGACTTTCTCCATGTGTGTATATTGTACACGGAAATAACT
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               51     -    101
UN17128        --> TTTAGACAAGGCAGACACGACCACATGTCCAGACCACACGGATATGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> TTTAGACAAGGCAGACACGACCACATGTCCAGACCACACGGATATGAGTT
FD547227       --> ............................................ccattc
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               101    -    151
UN17128        --> TACCGTTCAAGTCTTATCTTCTTAGATCAATTATATTTTTCTAAAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ...................................TTTTTCTAAAATAAA
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> TACCGTTCAAGTCTTATCTTCTTAGATAAATTATATTTTTCTAAAATAAA
FD547227       --> aagtcttatcttcttagatgaTTAGATCAATTATATTTATCTAAAATAAA
EX751107       --> ...............................................AAA
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               151    -    201
UN17128        --> CAACGGAGCCAAGAAATGAACATTAATGACGTTAAGGGATCTCATGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- CAACGGAGCCAAGAAATGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- ............................ACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. maritimus
EX887944       <-- ..................................................  Raphanus sativus var. oleiformis
EY940009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551327       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> CAACGGAGCCAAGAAATGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> CAACGGAGC-AAGAA-TGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> CAACGGAGCCAAGAA-TGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. maritimus
EV531365       --> .......GCCAAGAA-TGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. maritimus
FD967674       --> .....ggGCCAAGAAATGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> .....ggGCCAAGAAATGAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> .................GAACATTAATGACGTTAAGGGATCTCATGCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ........................AATGACGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> .............................CGTTAAGGGATCTCATGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> ..............................................cgTC  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN17128        --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- CAC----ATTTCTCACGTCTCTTATTCAATCTCCTATATAATAGATATAA  Raphanus raphanistrum subsp. maritimus
EX887944       <-- ..................................................  Raphanus sativus var. oleiformis
EY940009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551327       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> CACATT----TCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> CACATT----TCTCACGTCTCTTATTCAATCTCCTATATAATAGATATAA  Raphanus raphanistrum subsp. maritimus
EV531365       --> CACATT----TCTCACGTCTCTTATTCAATCTCCTATATAATAGATATAA  Raphanus raphanistrum subsp. maritimus
FD967674       --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> CACATT----TCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> CACATT----TCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> CACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> ..........................CAATCTCCTATATCATAGATAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN17128        --> A-CCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- A-CCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
EX746782       <-- AACCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> A-CCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
FD547227       --> A-CCAATTCGCTGAAGAGCACTTATACGACAATTTTATTGTTTATCTTAA
EX751107       --> AACCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
EV531365       --> AACCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
FD967674       --> A-CCAATTCACTGAAGATCACTTACACGACGATTTTATTGTTTATCTTAA
FD969338       --> A-CCAATTCACTGAAGATCACTTACACGACGATTTTATTGTTTATCTTAA
EY945253       --> A-CCAATTCACTGAAGAGCACTTATACGACAATTTTATTGTTTATCTTAA
FD969548       --> A-CCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
FD977260       --> A-CCAATTCACTGAAGAGCACTTATACGACAATTTTATTGTTTATCTTAA
EW738538       --> A-CCAATTCACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAA
FD967870       --> A-CCAATTCACTGAAGAGCATTTATACGACAATTTTATTGTTTATCTTAA

               301    -    351
UN17128        --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
EX746782       <-- ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
FD547227       --> ACTTAAAGAGGCTTCTGGCAAGTGATGATGCCAAAATTAATGACACCTTT
EX751107       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
EV531365       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
FD967674       --> ACTTAAAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
FD969338       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
EY945253       --> ACTTAGAGAGGCTTCTGGCAAGTGATGCTGCCAAACTTAATGATACCTTT
FD969548       --> ACTTAAAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
FD977260       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
EW738538       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACACCTTT
FD967870       --> ACTTAGAGAGGCTTCTGGCAAGTGATGATGCCGAACTTAATGACACCTTT

               351    -    401
UN17128        --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTAT
EX746782       <-- CTTGTACCCTTCGATCATCAATGGCATTGTAAATGCTCCTTTTATACTCT
EX887944       <-- ..........TCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
EY940009       <-- ..........................................TATACTCT
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCCCCTTTTATACTCT
FD547227       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
EX751107       --> CTTGTACCCTTCGATCATCAATGGCATTGTAAATGCTCCTTTTATACTCT
EV531365       --> CTTGTACCCTTCGATCATCAATGGCATTGTAAATGCTCCTTTTATACTCT
FD967674       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
FD969338       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
EY945253       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
FD969548       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
FD977260       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
EW738538       --> CTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCT
FD967870       --> CTTGTACCCTTCGATCGTCAATGGCATTGTCAATGCTCCTTTTATACTCT

               401    -    451
UN17128        --> TCATACCACTACGAAGCAGAAACACAAGGCCCTTCCATGTTAATGCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- TCATACCACTACGAAGCAGAGAAACAAGGCCCTTCCATGTTAATGCGGTT
EX746782       <-- TCATACCACTACGAAGCAGAGACACAAGGCCCTTCCATGTTAATGCGGTT
EX887944       <-- TCATACCACTACGAAGCAGAGACACAAGGCCCTTCCATGTTAATGCGGTT
EY940009       <-- TCATACCACTACGAAGCAGAGACACAGGGCCCTTCCATGTTAATGCGGTT
EV527027       <-- ..................................................
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> TCATACCACTACGAA...................................
FD547227       --> TCATACCACTACGAAGCAAAAACACAAGGCCCTTCCATGTTAATGCGGTT
EX751107       --> TCATACCACTACGAAGCAGAGACACAAGGCCCTTCCATGTTAATGCGGTT
EV531365       --> TCATACCACTACGAAGCAGAGACACAAGGCCCTTCCATGTTAATGCGGTT
FD967674       --> TCATACCACTACGAAGCAAAAACACAAGGCCCTTCCATGTTAATGCGGTT
FD969338       --> TCATACCACTACGAAGCAGAAACACAAGGCCCTTCCATGTTAATGCGGTT
EY945253       --> TCATACCACTACGAAGCAGAAACACAAGGCCCTTCCATGTTAATGCGGTT
FD969548       --> TCATACCACTACGAAGCAAAAAAACAAGGCCCTTCCATGTTAATGCGGTT
FD977260       --> TCATACCACTACGAAGCAGAGACACAAGGCCCTTCCATGTTAATGCGGTT
EW738538       --> TCATACCACTACGAAGCAAAGACACAAGGCCCTTCCATGTTAATGCGGTT
FD967870       --> TCATACCACTACGAAGCAAAAACACAAGGCCCTTCCATGTTAATGCGGTT

               451    -    501
UN17128        --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
EX746782       <-- CGTATAACCGCCGGCCAGAAAGGAGCCACATTCTCTGACCAATCTGCACA
EX887944       <-- CGTATAACCGCCGGCCAGAAAGGAGCTACGTTCTCTGACCAATCTGCACA
EY940009       <-- CGTATAACCGCCGGCCAGAAAGGAGCTACGTTCTCTGACCAATCTGCACA
EV527027       <-- ................AGAAAGGAGCTACATTCTCTGACCAATCTGCACA
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ..................................................
FD547227       --> CGTATAACCGCCGGCCAAAAAGGAGCTACATTCTCTGACCAATCTGCACA
EX751107       --> CGTATAACCGCCGGCCAGAAAGGAGCCACATTCTCTGACCAATCTGCACA
EV531365       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
FD967674       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
FD969338       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
EY945253       --> CGTATAACCGCCGGCCAGAAAGGAGCTACGTTCTCTGACCAATCTGCACA
FD969548       --> CGTATAACCGCCGGCCAAAAAGGAGCTACATTCTCTGACCAATCTGCACA
FD977260       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
EW738538       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA
FD967870       --> CGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACA

               501    -    551
UN17128        --> CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. maritimus
EX887944       <-- CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus sativus var. oleiformis
EY940009       <-- CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATTGACATAATCAGAGG  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. maritimus
FD551327       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. maritimus
EV531365       --> CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. maritimus
FD967674       --> CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATTGACATAATCAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATTGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATTGACATAATCAGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> CTTAATATCCTGGAGGGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> CTTAATATCCTGGAGGGTGAGGGATTGAAGCAAATTGACATAATCAGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> CTTAATATCCTGGAGCGAGAGGGATTGAAGCAAATCGACATAATCAGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN17128        --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EX746782       <-- TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EX887944       <-- TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCTAAGAGG
EY940009       <-- TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EV527027       <-- TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
FD551327       <-- ..................................................
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ..................................................
FD547227       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAAATTCTGTCCAAAAGG
EX751107       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EV531365       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
FD967674       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTT...................
FD969338       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EY945253       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
FD969548       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAAATTCTGTCCAAAAGG
FD977260       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
EW738538       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGG
FD967870       --> TGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAAATTCTGTCCAAGAGG

               601    -    651
UN17128        --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- TTCTGTTCCCATGGCTGCAAAGCTTCTTCTCC-TGGGGATAGATTTCTGT
EX746782       <-- TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
EX887944       <-- TTCTGCTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGGTAGATTTCTGT
EY940009       <-- TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCCCTTGGGATAGATTTCTGT
EV527027       <-- TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
FD551327       <-- ........................ctcTCCCC-TGGG-ATAGATTTCTGT
EX897046       <-- ..................................................
EY949807       <-- ..................................................
EV537405       <-- ..................................................
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ..................................................
FD547227       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
EX751107       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
EV531365       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
FD967674       --> ..................................................
FD969338       --> TTCTGTTCCCATGGCTGCAGAGCTTCTTCCCC-TGGGGATAGATTTCTGT
EY945253       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TTGGGATAGATTTCTGT
FD969548       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCTCC-TGGGGATAGATTTCTGT
FD977260       --> TTCTGTTCCCATGGCTGCAAAGCTTCTTCCCC-TGGGGATAGATTTCTGT
EW738538       --> TTCTGTTCCCATGGCTGCAGAGCTTCTTCCCC-TGGGGATAGATTTCTGT
FD967870       --> TTCTGTTCCCATGGTTGCAAAGCTTCTTCCCC-TTGGGATAGATTTCTGT

               651    -    701
UN17128        --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EX746782       <-- GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EX887944       <-- GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EY940009       <-- GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EV527027       <-- GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
FD551327       <-- G-CACCATGTCACTATTATTATC-TT-CTCCTGGAGCCGCCACACGTACC
EX897046       <-- .........................TCCTCCTGGAGCCGCCACACGTACC
EY949807       <-- ......................atcTCCTCCTGGAGCCGCCACACGTACC
EV537405       <-- ............................TCCTGGAGCCGCCACACGTACC
FD981516       <-- ..................................................
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ..................................................
FD547227       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EX751107       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EV531365       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
FD967674       --> ..................................................
FD969338       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EY945253       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
FD969548       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
FD977260       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
EW738538       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC
FD967870       --> GGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGCCACACGTACC

               701    -    751
UN17128        --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EX746782       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EX887944       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EY940009       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATACGCTCACCGCTTTCCA
EV527027       <-- CAATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
FD551327       <-- -AATTC-TTCACGAACTTGGC-TTGTCAGGCATATGCTCACCGCTTTCCA
EX897046       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EY949807       <-- -AAT-CCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EV537405       <-- -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
FD981516       <-- .........CACGAACTTGGC-TTGTCAGGCATATGCTCACCGCTTTCCA
FD577044       <-- ..................................................
FD569172       <-- ..................................................
FD973969       <-- ..................................................
FD545822       --> ..................................................
FD547227       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EX751107       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EV531365       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
FD967674       --> ..................................................
FD969338       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EY945253       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
FD969548       --> -AATTCCTT.........................................
FD977260       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
EW738538       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCA
FD967870       --> -AATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCACTTTCCA

               751    -    801
UN17128        --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- TTGACC............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. maritimus
EX887944       <-- TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGTTCCAGCGCA  Raphanus sativus var. oleiformis
EY940009       <-- TTGACCATACAAGATCGAACATTCCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- TTGACCACACAAGATCGAAAATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. maritimus
FD551327       <-- TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- TTGACCATACAAGATCGAACATTCCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- TTGACCATACAAGATCGAACATTCCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. maritimus
EV531365       --> TTGACCACACAAGATCGAAAATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> TTGACCATACAAGATCGAACATTCCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> TTGACCACACAAGATCGAACATACCATCTTCAAATGGTTGCTCCAGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN17128        --> TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCGGCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. maritimus
EX887944       <-- TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus sativus var. oleiformis
EY940009       <-- TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. maritimus
FD551327       <-- TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- TTTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCTGCGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ........................TGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. maritimus
EV531365       --> TCTGCAACCTGGAAGGAAACCTTCTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCG........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGA...............  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> TCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGG.......  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> TCTG-GACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCCGCGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> TCTGCAACCTGGAAGGAAACCTTTTGAGAGAGTGATTGAGCGGCGGCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN17128        --> ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- ATCATTGGCTCTCTc...................................  Raphanus raphanistrum subsp. maritimus
EX887944       <-- ATCATTGGCTCTCTTGGCTTGAACGGGACTGAGTGTGATGCCAATGCATT  Raphanus sativus var. oleiformis
EY940009       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- ATCATTGGCTCTCTTGGCTTGAACGGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. maritimus
FD551327       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGC...  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- ATCATTGGCTCTCTTGGCTTGAACGGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- ATCATTGGCTCTCTTGGCTCGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- .......................cgGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> ATCATTGGCTCTCTTGGCTTG.............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> ATCATTGGCTCTCTc...................................  Raphanus raphanistrum subsp. maritimus
EV531365       --> ATCATTGGCTCTCTTGGCTTGAACGGGACTGAGTGTGATGCCAACGCATT  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> ATCATTGGCTCTCTTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> ATCATTGGCTCTCTTGGCTTGAACGGGACTGAGTGTGATGCCGACGCATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN17128        --> CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887944       <-- CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCACAA  Raphanus sativus var. oleiformis
EY940009       <-- CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCCCAA  Raphanus raphanistrum subsp. maritimus
FD551327       <-- CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- CGGCACCAAATTTGGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACAA  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531365       --> CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCCCAA  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> CGGCACCAAATTTAGAGGCAATATATCTTGAGCTTC..............  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> CGGCACCAAATTTAGAGGCAATATACCTTGAGCTTCCTCCGATCCCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN17128        --> CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCTGTAACGCCGGC
EY940009       <-- CCAACATCCACTACTCTCTTTATCc.........................
EV527027       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGC
FD551327       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGC
EX897046       <-- ..................................................
EY949807       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACACCAGC
EV537405       <-- CCAACATCCACTACTTTCTTTATCTTTTTCTCCTCTTCAGTAACGCCGGC
FD981516       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGC
FD577044       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACACCAGC
FD569172       <-- CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACACCAGC
FD973969       <-- CCAACATCCACTACTTTCTTTATCTTTTTCTCCTCTTCAGTAACGCCGGC
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> CCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGC
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> CCAACATCAACTACTCTCTTTATCTTTTT.....................

               1001   -   1051
UN17128        --> GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- GAAACCTAGAGACTCTTCAA..............................
EY940009       <-- ..................................................
EV527027       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
FD551327       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
EX897046       <-- ..................................................
EY949807       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
EV537405       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
FD981516       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
FD577044       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTACCGGTGACCGG
FD569172       <-- GAAACGTAGAGACTCTTCAATCATCCGGATATGAGCTTCCCGGTGACCGG
FD973969       <-- GAAACGTAGAGACTCTTCAATCATCCGGATCTGAGCTTCCCGGTGACCGG
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> GAAACGTAGAGACTCTTCAAT.............................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               1051   -   1101
UN17128        --> AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- AATCTGAAAGTTGCACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
FD551327       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
EX897046       <-- ..................................................
EY949807       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
EV537405       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGGTGCATA
FD981516       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
FD577044       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
FD569172       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATA
FD973969       <-- AATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGGTGCATA
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               1101   -   1151
UN17128        --> TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- TGATCCCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD551327       <-- TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
EX897046       <-- ..................................................
EY949807       <-- TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
EV537405       <-- TGATCTCCCCAAATCTCTTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD981516       <-- TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD577044       <-- TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD569172       <-- TGATCTCCCCAAATCTCCTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD973969       <-- TGATCTCCCCAAATCTCTTCCCATAATCCCGACGTCTCGTTGTAGAATTC
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               1151   -   1201
UN17128        --> AGCTATTCCTTCTCGCAGCGCCTCGACGGAGGAGGTGGCAGCAGCCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887944       <-- ..................................................  Raphanus sativus var. oleiformis
EY940009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- AGCTATCCCTTCTCGCAGCGCCTCGACGGAGGAGGTAGCAGCAGCAGTCA  Raphanus raphanistrum subsp. maritimus
FD551327       <-- AGCTATTCCTTCTCGCAGCGCCTCAACGGAGGAGGTGGCAGCAGCCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- AGCTATTCCTTCTCGCAGCGCCTCGACGGAGGAGGTGGCAGCAGCCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- AGCTATTCCTTCTCGCAGCGCCTCAACGGAGGAGGTAGCAGCAGCCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- AGCTATTCCTTCTCGCAGCGCCTCAACGGAGGAGGTGGCAGCAGCCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- AGCTATTCCTTCTCGCAGCGCCTCGACGGAGGAGGTGGCAGCAGCCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- AGCTATTCCTTCTCGCAGCGCCTCGACGGAGGAGGTGGCAGCAGCCGTCA  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- AGCTATTCCTTCTCGCAGCGCCTCAACGGAGGAGGTAGCAGCAGCCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531365       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN17128        --> CAGCCACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- CAGCTACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
FD551327       <-- CAGTCACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
EX897046       <-- ..................................................
EY949807       <-- CAGCCACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
EV537405       <-- CAGCCACGCTTCCACGTGATGCCG---TCGTCGTCGTCATTAAGGCTGAG
FD981516       <-- CAGTCACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
FD577044       <-- CAGCCACGCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
FD569172       <-- CAGCCACGTTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAG
FD973969       <-- CAGCCACGCTTCCAAGTGATGCCG---TCGTCGTCGTCATTAAGGCTGAG
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               1251   -   1301
UN17128        --> GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746782       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887944       <-- ..................................................  Raphanus sativus var. oleiformis
EY940009       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV527027       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAA  Raphanus raphanistrum subsp. maritimus
FD551327       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897046       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY949807       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGATAC  Raphanus sativus cv Rat-Tail Radish #3870
EV537405       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981516       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD577044       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGATAC  Raphanus sativus cv Rat-Tail Radish #3870
FD569172       <-- GATGGCCGTTGGGACTGAATGAAAAGCGACGGTGAACGGAGAGAAGATAC  Raphanus sativus cv Early Scarlet Globe
FD973969       <-- GATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAGAAGAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545822       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547227       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751107       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531365       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD967674       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969338       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945253       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969548       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977260       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738538       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD967870       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN17128        --> TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ..................................................
EX746782       <-- ..................................................
EX887944       <-- ..................................................
EY940009       <-- ..................................................
EV527027       <-- TTTGTGCCTGGGGAGGC.................................
FD551327       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
EX897046       <-- ..................................................
EY949807       <-- TTTGTGCCTGGGGAGGCTGATGAGAGA---GGGTGCGAGAGTCGCTTTCA
EV537405       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
FD981516       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
FD577044       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
FD569172       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
FD973969       <-- TTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCA
FD545822       --> ..................................................
FD547227       --> ..................................................
EX751107       --> ..................................................
EV531365       --> ..................................................
FD967674       --> ..................................................
FD969338       --> ..................................................
EY945253       --> ..................................................
FD969548       --> ..................................................
FD977260       --> ..................................................
EW738538       --> ..................................................
FD967870       --> ..................................................

               1351   -   1401
UN17128        --> TTTATAATGAGAGGTTGGCGAAACAGGAAATGTGGCTGTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD970345       <-- ...........................................
EX746782       <-- ...........................................
EX887944       <-- ...........................................
EY940009       <-- ...........................................
EV527027       <-- ...........................................
FD551327       <-- TTTATAATGAGAGGATGGCGAAACAGGAAATGTcc........
EX897046       <-- ...........................................
EY949807       <-- TTTATAATGAGAGGTTGGCGAAACAGGAAATcc..........
EV537405       <-- TTTATAATGAGAGGTTGGCGAAACAAGAAATc...........
FD981516       <-- TTTATAATGAGAGGATGGCGAAACAGGAAATGTGGCTGTGTCC
FD577044       <-- TTTATAATGAGAGGTTGGCGAAACAGGAAATGTAGCTcc....
FD569172       <-- TTTATAATGAGAGGTTGGCGAAACc..................
FD973969       <-- TTTATAATGAGAGGTTGGCGAAACcc.................
FD545822       --> ...........................................
FD547227       --> ...........................................
EX751107       --> ...........................................
EV531365       --> ...........................................
FD967674       --> ...........................................
FD969338       --> ...........................................
EY945253       --> ...........................................
FD969548       --> ...........................................
FD977260       --> ...........................................
EW738538       --> ...........................................
FD967870       --> ...........................................