Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17129

               -2     -     48
UN17129        --> ...TGATAAAATAATAAATCAGTACTAAAAGAAATTCAATATGGAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> ctgTGATAAAATAATAAATCAGTACTAAAAGAAATTCAATATGGAGATCA
EY919566       --> ..gTGATAAAATAATAAATCAGTACTAAAAGAAATTCAATATGGAGATCA
EW730470       --> ...................gAGTACTAAAAGAAATTCAATATGGAGATCA
FD934803       --> ...................................TCAATATGGAGATCA

               48     -     98
UN17129        --> TAGTGACAAAAGATAAAACTACAATTACTCTTTTCCGGTTCTATGAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> TAGTGACAAAAGATAAAACTACAATTACTCTTTTCCGGTTCTATGAACCA
EY919566       --> TAGTGACAAAAGATAAAACTACAATTACTCTTTTCCGGTTCTATGAACCA
EW730470       --> TAGTGACAAAAGATAAAACTACAATTACTCTTTTCCGGTTCTATGAACCA
FD934803       --> TAGTGACAAAAGATAAAACTACAATTACTCTTTTCCGGTTCTATGAACCA

               98     -    148
UN17129        --> ACGAACCGGCATTTTATTTATCCCAAAATCTAACACCTAAAAACACATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> ACGAACCGGCATTTTATTTATCCCAAAATCTAACACCTAAAA-CACATCC
EY919566       --> ACGAACCGGCATTTTATTTATCCCAAAATCTAACACCTAAAAACACATCC
EW730470       --> ACGAACCGGCATTTTATTTATCCCAAAATCTAACACCTAAAAACACATCC
FD934803       --> ACGAACCGGCATTTTATTTATCCCAAAATCTAACACCTAAAAACACATCC

               148    -    198
UN17129        --> ATCCAGCAGCATCACTACCACCAGTTTCACTCAAGCTGAAAACTCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- .......................................AAACTCAAACA
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> ATCCAGCACCATCACTACCACCAGTTTCACTCAAGCTGAAAACTCAAACA
EY919566       --> ATCCAGCAGCATCACTACCACCAGTTTCACTCAAGCTGAAAACTCAAACA
EW730470       --> ATCCAGCAGCATCACTACCACCAGTTTCACTCAAGCTGAAAACTCAAACA
FD934803       --> ATCCAGCAGCATCACTACCACCAGTTTCACTCAAGCTGAAAATTCAAACA

               198    -    248
UN17129        --> GCATAGTGTGCTTGTACTTCTCACCAGCCTTGACCACAACACACGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- GCATAGTGTGCTTGTACTTCTCACCAGCCTTGACCACAACACACGGGAAA
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> GCATAGTGTGCTTGTACTTCTCACCTGCCTTAACTACAACACACGGGAAA
EY919566       --> GCATAGTGTGCTTGTACTTCTCACCAGCCTTGACCACAACACACGGGAAA
EW730470       --> GCATAGTGTGCTTGTACTTCTCACCAGCCTTGACCACAACACACGGGAAA
FD934803       --> GCATAGTGTGCTTGTACTTCTCACCAGCCTTGACCACAACACACGGGAAA

               248    -    298
UN17129        --> CTCTTCTGGTTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- CTCTTCTGGTTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> CTATTCTGATTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC
EY919566       --> CTCTTCTGGTTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC
EW730470       --> CTCTTCTGGTTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC
FD934803       --> CTCTTCTGGTTAATCGCGTTCGGGAACCCTTGCGTCTCAAGGCACACACC

               298    -    348
UN17129        --> TGCATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- TGCATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
EX889456       <-- ..........CCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> TGAATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
EY919566       --> TGCATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
EW730470       --> TGCATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT
FD934803       --> TGCATGCTTCCCATAAACCGCATTCCCTTTCCCCACCACTCCATCCACAT

               348    -    398
UN17129        --> AGTTCCCCGTATAAAACTGCACACCGGGAGCATCG----GTCCACAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- AGTTCCCCGTATAAAACTGCACACCGGGAACATCGATCGGTCCACAAGTC
EX889456       <-- AGTTCCCCGTATAAAACTGCACACCGGGAGCATCG----GTCCACAAGTC
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> AGTTCCCCGTATAAAACTGCACACCGGGAGCATCG----GTCCACAAGTC
EY919566       --> AGTTCCCCGTATAAAACTGCACACCGGGAACATCGATCGGTCCACAAGTC
EW730470       --> AGTTCCCCGTATAAAACTGCACACCGGGAGCATCG----GTCCACAAGTC
FD934803       --> AGTTCCCCGTGTAGAACTGCACACCAGGAGCATCG----GTCCACAAGTC

               398    -    448
UN17129        --> CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCGCGTGTTTCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCGCGTGTGTCAGCC
EX889456       <-- CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCACGTGTTTCAGTC
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCACGTGTTTCAGTC
EY919566       --> CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCGCGTGTGTCAGCC
EW730470       --> CATCACCCTTGAGCTCTCACCGTCTCTAAGCCTCGCCGCGTGTTTCAGCC
FD934803       --> CATCACTCTTGAGCTCTCACCGTCTCTAAGCCTCGCCGCGTGTTTCAGCC

               448    -    498
UN17129        --> CGTCTTTCTCTTGATCAGGACAGTCCAACACGTAGTTGTGATCGTACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- CGACTTTCTCTTGATCAGGACAGTCCAACACGTAGTTGTGATCGTACCCA  Raphanus raphanistrum subsp. landra
EX889456       <-- CGTCTTTCTCTTGATCAGGACAGCCCAACACGTAGTTGTGATAGTACCCA  Raphanus sativus var. oleiformis
EW726195       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905868       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX758177       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893181       --> CGTCTTTCTCTTGATCAGGACAGCCCAACACGTAGTTGTGATAGTACCCA  Raphanus sativus var. oleiformis
EY919566       --> CGACTTTCTCTTGATCAGGACAGTCCAACACGTAGTTGTGATCGTACCCA  Raphanus raphanistrum subsp. landra
EW730470       --> CGACTTTCTCTTGATCAGGACAGTCCAACACGTAGTTGTGATCGTACCCA  Raphanus sativus cv Early Scarlet Globe
FD934803       --> CATCTTTCTCTTGA....................................  Raphanus sativus var. oleiformis

               498    -    548
UN17129        --> ATTCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCGGTGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ATCCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCTGTGAAATC
EX889456       <-- ATTCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCGGTGAAATC
EW726195       <-- ...................................tctCTCGGTGAA-TC
EX905868       <-- ..................................................
EX758177       <-- ..................................................
EX893181       --> ATTCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCGGTGAAATC
EY919566       --> ATCCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCTGTGAAATC
EW730470       --> ATTCCCACCTCTCCTATACGCTCTCCTATCCGTTTCTCCTCGGTGAAATC
FD934803       --> ..................................................

               548    -    598
UN17129        --> GAAAGGAGTTCCTTTCACCGGCAAGAGCTCTCCTGTAGGAACTGAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- AAAAGGAGTTCCTTTCACCGGCAAGAGCTCCCCCGTAGGAACTGAGTGTT
EX889456       <-- GAAAGGAGTTCCTTTCACCGGCAAGAGCTCTCCTGTAGGAACTGAGTGTT
EW726195       <-- GAAAGGAGT-CCTTTTACCGGTAAGAGCTCTCCTGTAGGAACTGAGTGTT
EX905868       <-- ...............tcaCGGCAAGAGCTCTCCTGTAGGAACTGAGTGTT
EX758177       <-- ..................................................
EX893181       --> GAAAGGAGTTCCTTTCACCGGCAAGAGCTCTCCTGTAGGAACTGAGTGTT
EY919566       --> AAAAGGAGTTCCTTTCACCGGCAAGAGCTCCCCCGTAGGAACTGAGTGTT
EW730470       --> GAAAGGAGTTCCTTTTACCGGTAAGAGCTCTCCTGTAGGAACTGAGTGTT
FD934803       --> ..................................................

               598    -    648
UN17129        --> GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
EX889456       <-- GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
EW726195       <-- GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
EX905868       <-- GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
EX758177       <-- ..................................................
EX893181       --> GATCCACGGGGGTGATATGAGAACC.........................
EY919566       --> GATCCACGGGGGTGATATG...............................
EW730470       --> GATCCACGGGGGTGATATGAGAACCCCAGATTTGGATCCTGTGGTCAAGA
FD934803       --> ..................................................

               648    -    698
UN17129        --> ATGTTTCCTGAGTCGTGACCCGATAAGTTCCAGTATGTATGTTGAGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ATGTTTCCTGAGTCGTGGCCCGATAAGTTCCAGTATGTATGTTGAGCTAA
EX889456       <-- ATGTTTCCTGAGTCGTGACCCGATAAGTTCCAGTATGTATGTTGAGCTAA
EW726195       <-- ATGTT-CCTGAGTCGTGACCCGATAAGTTCCAGTATGTATGTTGAGCTAA
EX905868       <-- ATGTTTCCTGAGTCGTGACCCGATAAGTTCCAGTATGTATGTTGAGCTAA
EX758177       <-- ..................................................
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ATGTTTCCTGAGTCGTGACCCGATAAGTTCCAGTATGTATGTTGAGCTAA
FD934803       --> ..................................................

               698    -    748
UN17129        --> ATTGATGGGAGTGTCTTTGTTCTCAGGAACTGCCTCCATGTCGAGTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- GTTGATTGGAGTGTCTTTGTTTTCAGGAACTGCCTCCATGc.........
EX889456       <-- ATTGATGGGAGTGTCTTTGTTCTCAGGAACTGCCTCCATGTCGAGTCTCA
EW726195       <-- ATTGATGGGAGTGTCTTTGTTCTCAGGAACTGCCTCCATGTCGAGTCTCA
EX905868       <-- ATTGATGGGAGTGTCTTTGTTCTCAGGAACTGCCTCCATGTCGAGTCTCA
EX758177       <-- ..................................................
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ATTGATGGGAGTGTCTTTGTTCTCAGGAACTGCCTCCATGTCGAGTCTCA
FD934803       --> ..................................................

               748    -    798
UN17129        --> TGGTCGTGGCTGACGTGAGAGTGTATGTCGCCGTGACAGTAACAGCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- TGGTCGTGGCTGACGTGAGAGTGTATGTCGCCGTGACAGTAACAGCACCG
EW726195       <-- TGGCCGTGGCTGACGTGAGAGTGTATGTCACCGTGACAGTAACCGCACCG
EX905868       <-- TGGTCGTGGCTGACGTGAGAGTGTATGTCGCCGGGACAGTAGCAGCACCG
EX758177       <-- ..................................................
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> TGGCCGTGGCTGACGTGAGAGTGTATGTCACCGTGACAGTAA........
FD934803       --> ..................................................

               798    -    848
UN17129        --> GGATAGCCTTCTTCTCCATCGGCGCTGTGATATTTGAATGTGATGAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- GGATAGCCTTCTTCTCCATCGCCGCTGTGATATTTGAATGTGATGAAAGG
EW726195       <-- GGATAGCCTTCTTCTCCATCGGCGCTGTGATATTTGAATGTGATGAAAGG
EX905868       <-- GGATAGCCTTCTTCTCCATCGCCGCTGTGATATTTGAATGTGATGAAAGG
EX758177       <-- ....atagcTCTTCTCCATCGGCGCTGTGATATTTGAATGTGATGAAAGG
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               848    -    898
UN17129        --> TTTGTCACCGTCTTTCTTGTGTCCTGCGACTTCCCATAGCTTCTTGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- TTTGTCACCGTCTTTCTTGTGACCTGCGACTTCCCATAGCTTCTTGTCGc
EW726195       <-- TTTGTCACCGTCTTTCTTGTATCCTGCGACTTCCCATAACTTCTTATCGA
EX905868       <-- TTTGTCACCGTCTTTCTTGTGACCTGCGACTTCCCATAGCTTCTTGTCGA
EX758177       <-- TTTGTCACCGTCTT-CTTGTGTC-TGCGACTTCCCATAATTTCTTGTCGA
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               898    -    948
UN17129        --> AACCTTTGTTACCACCGTGGAGGCTATTGGGACCATTGTTGATGGGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- c.................................................
EW726195       <-- AACCTTTGTTGCCACCGTGGAGGCTGTTGGGACCATTGTTGATGGGCAAA
EX905868       <-- AACCTTTGTTACCACCGTGGAGGCTATTGGGACCATTGTTGATGGGCAAA
EX758177       <-- AACCTTTGTTACCACCGTGGAGGCTATTGGGACCATTGTTGATGGGCAAA
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               948    -    998
UN17129        --> GTGTAGTCAACTCCATTGAGACTAAACTTGCCCTCTTTAATCCGATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- GTATAGTCAACTCCATTGAGACTAAACTTGCCCTCTTTAATCCGATTTGC
EX905868       <-- GTGTAGTCGACTCCATTGAGACTAAACTTGCCTTCTTTGATCCGATTTGC
EX758177       <-- GTGTAGTCAACTCCATTGAG-CTAAACTTGCCCTCTTTAATCCGATTTGC
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               998    -   1048
UN17129        --> TACACGACCAACTATGCAACCGAAGTAGGGTGCAAGCCCGTTCACATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- TACACGACCAACTATGCAACCGAAGTAGGGTGCAAGCCCGTTCACATATG
EX905868       <-- TACACGACCAACTATGCAACCGAAGTAGGGTGCAAGCCCGTTCACATATG
EX758177       <-- TACACGACCAACTATGCAACCGAAGTAGGGTGCAAGCCCGTTCACATATG
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1048   -   1098
UN17129        --> GATCCACCGAGTCAAATCCGAGAACTACATCAGCCAGTTTCCCGTTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- GATCCACCGAGTCAAATCCGAGAACTACATCAGCCAGTTTACCGTTATTG
EX905868       <-- GATCCACCGAGTCAAATCCGAGAACTACATCAGCCAGTTTCCCGTTATTG
EX758177       <-- GATCCACCGAGTCAAATCCGAGAACTACATCAGCCAGTTTCCCGTTATTG
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1098   -   1148
UN17129        --> TCGGGGACAGACAAGGAGGTGATGGTGGCGCCATAGTTAGAGATCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- TCGGGGACAGACAAGGAGGTGACGGTGGCGCCATAGTTAGAGATCTTGAC
EX905868       <-- TCGGGGACAGACAAGGAGGTGATGGTGGCGCCATAGTTAGAGATCTTGAC
EX758177       <-- TCGGGGACAGACAAGGAGGTGATGGTGGCGCCATAGTTAGAGATCTTGAC
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1148   -   1198
UN17129        --> CTGCATGGATCCATTGTTGAGCTCGAAGATCTCAGGAGTGTTGTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- CTGCATGGATCCATTGTTGAGCTCGAAGATCTCAGGAGTGTTGTTGTTCT
EX905868       <-- CTGCATGGATCCATTGTTGAGCTCGAAGATCTCAGGAGTGTTGTTGTTCT
EX758177       <-- CTGCATGGATCCATTGTTGAGCTCGAAGATCTCAGGAGTGTTGTTGTTCT
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1198   -   1248
UN17129        --> TGCTCTGATCCGCCATTAGAGAGATTGAAGTTCAAGTTAGGGTTAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- TGCTCTGATCCGCCATTAGAGAGATTGAAGTcc.................
EX905868       <-- TGCTCTGATCCGCCATTAGAGAGATTGAAGTTCAAGTTAGGGTTAAGGAT
EX758177       <-- TGCTCTGATCCGCCATTAGAGAGATTGAAGTTCAAGTTAGGGTTAAGGAT
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1248   -   1298
UN17129        --> AAGAAGGGAGAGAAAGCCAAGTGAATTAGATTTTGTTGATATGTAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- AAGAAGGAAGAGAAAGaccc..............................
EX758177       <-- AAGAAGGGAGAGAAAGCCAAGTGAATTAGATTTTGTTGATATGTAAAAGA
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1298   -   1348
UN17129        --> GAGAGAGAAACAAGGGGGGGGGGGGAAGTGATCAGTTCTGTTGAGCTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- GAGAGAGAAACAAGGGGGGGGGGGGAAGTGATCAGTTCTGTTGAGCTACG
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1348   -   1398
UN17129        --> CTGACGTCATCTCAATCTCAAACTTAAAAAAAAAAAAAGAATTAAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- CTGACGTCATCTCAATCTCAAACTTAAAAAAAAAAAAAGAATTAAAAAGA
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1398   -   1448
UN17129        --> CAAACAATTACATTTATTTTATGAGTTAATTGGCTGAATACCCTAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- CAAACAATTACATTTATTTTATGAGTTAATTGGCTGAATACCCTAAAACA
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1448   -   1498
UN17129        --> ATGCAGATACCATAGAGGGTGGGATGGAGGAGGGGAGAATGGTAGTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923824       <-- ..................................................
EX889456       <-- ..................................................
EW726195       <-- ..................................................
EX905868       <-- ..................................................
EX758177       <-- ATGCAGATACCATAGAGGGTGGGATGGAGGAGGGGAGAATGGTAGTGATG
EX893181       --> ..................................................
EY919566       --> ..................................................
EW730470       --> ..................................................
FD934803       --> ..................................................

               1498   -   1548
UN17129        --> GGGGAAAAAAA
                   ~~~~~~~~~~~
EY923824       <-- ...........
EX889456       <-- ...........
EW726195       <-- ...........
EX905868       <-- ...........
EX758177       <-- GGGGAAAAAAA
EX893181       --> ...........
EY919566       --> ...........
EW730470       --> ...........
FD934803       --> ...........