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Alignment for radish unigene UN17140

               1      -     51
UN17140        --> CGTCAACTGACAAAATTTATAGAATCATCATATTGTTTTATTAAATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- ....................tagATCATCATAT-GTTT-AT-AAATTATT
EW714948       <-- ..............................................TATT
EX746246       <-- ..................................................
FY452829       <-- ..................................................
FD963543       <-- ..................................................
FD978175       <-- ..................................................
FD570320       <-- ..................................................
EX754211       <-- ..................................................
FD541131       <-- ..................................................
EY929632       <-- ..................................................
EW719742       --> CGTCAACTGACAAAATTTATAGAATCATCATATTGTTTTATTAAATTATT
EX774865       --> ....................AGAATCATCATATTGTTTTATTAAATTATT
EX750699       --> ....................gGAATCATCATATTGTTTTATTAAATTATT
FD537488       --> ..........................................AAATTATT
FD959825       --> ..................................................
FD574350       --> ..................................................

               51     -    101
UN17140        --> GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAA-TATTCAGAACCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAA-TAT-CAGAACCAAA
EW714948       <-- GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAA-TATTCAGAACCAAA
EX746246       <-- .................................AA-TATTCAGAACCAAA
FY452829       <-- .....................................ATTCAGAACCAAA
FD963543       <-- .................................tttttTTCAGAACCAAA
FD978175       <-- .......................................TCAGAACCAAA
FD570320       <-- ..................................................
EX754211       <-- ..................................................
FD541131       <-- ..................................................
EY929632       <-- ..................................................
EW719742       --> GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAA-TATTCAGAACCAAA
EX774865       --> GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAAATATTCAGAACCAAA
EX750699       --> GATGTATTCCATATAGTGTGCAAAAGAAAAAAAAA-TATTCAGAACCAAA
FD537488       --> GATGCATTCCATATAGTGTGCAAAAGAAAAAAAA--TATTCAGAACCAAA
FD959825       --> ........................................caaAACCAAA
FD574350       --> ..................................................

               101    -    151
UN17140        --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTT-CATGAGAAACACC
EW714948       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
EX746246       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTT-CATGAGAAACACC
FY452829       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
FD963543       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTT-CATGAGAAACACC
FD978175       <-- AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
FD570320       <-- gGTCAAATGATTATCACTCATGTTACTTGTTGTTTT-CATGAGAAACACC
EX754211       <-- ...............................tgTTTTCATGAGAAACACC
FD541131       <-- ..................................................
EY929632       <-- ..................................................
EW719742       --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
EX774865       --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
EX750699       --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
FD537488       --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC
FD959825       --> AGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAAAAACACC
FD574350       --> gGTCAAATGATTATCACTCATGTTACTTGTTGTTTTTCATGAGAAACACC

               151    -    201
UN17140        --> AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
EW714948       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
EX746246       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
FY452829       <-- AAAAGAACTCACAATGCCGCAAAAGAAAACATATCATAAA-CATTACAAA
FD963543       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
FD978175       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
FD570320       <-- AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
EX754211       <-- AAAAGAACTCACAATGCCGCAAAAGAAAACATATCATAAAACATTACAAA
FD541131       <-- ..................................................
EY929632       <-- ..................................................
EW719742       --> AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
EX774865       --> AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
EX750699       --> AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA
FD537488       --> AAAAGAACTCACAATGCCGCAAAAGAAAACATATCATAAAACATTACAAA
FD959825       --> AAAAGAACTCACAATGCCCCAAAAGAAAACATATCATAAA-CATTACAAA
FD574350       --> AAAAGAACTCACAATGCCACAAAAGAAAACATATCATAAA-CATTACAAA

               201    -    251
UN17140        --> GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTTACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. landra
EW714948       <-- GAGGATGTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus sativus var. oleiformis
EX746246       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. maritimus
FY452829       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus sativus cv GSK3-1
FD963543       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCAATCGGCTCTAGACTG  Raphanus raphanistrum subsp. maritimus
FD978175       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570320       <-- GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTTACTCGGCTCTAGACTG  Raphanus sativus cv Early Scarlet Globe
EX754211       <-- GAGGACTTAAACCAAAAGGCTTTCTGGTTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541131       <-- ...........................TTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929632       <-- ..................................................  Raphanus sativus var. oleiformis
EW719742       --> GAGGATGTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus sativus var. oleiformis
EX774865       --> GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTTACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. landra
EX750699       --> GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. maritimus
FD537488       --> GAGGACTTAAACCAAAAGGCTTTCTGGTTTTTTCACTCGGCTCTAGACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959825       --> GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTCAATCGGCTCTAGACTG  Raphanus raphanistrum subsp. maritimus
FD574350       --> GAGGACTTAAACCAAAAGGCTTTCTGATTTTTTTACTCGGCTCTAGACTG  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN17140        --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAGCGCAA  Raphanus raphanistrum subsp. landra
EW714948       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGGGACCGTACAACGCAA  Raphanus sativus var. oleiformis
EX746246       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. maritimus
FY452829       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATAAGACCGTACAACGCAA  Raphanus sativus cv GSK3-1
FD963543       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. maritimus
FD978175       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570320       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAGCGCAA  Raphanus sativus cv Early Scarlet Globe
EX754211       <-- ACCAGCACGGGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541131       <-- ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929632       <-- ..................................................  Raphanus sativus var. oleiformis
EW719742       --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGGGACCGTACAACGCAA  Raphanus sativus var. oleiformis
EX774865       --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAGCGCAA  Raphanus raphanistrum subsp. landra
EX750699       --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. maritimus
FD537488       --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959825       --> ACCAGCACGAGAAGAGAGGATGATACC.......................  Raphanus raphanistrum subsp. maritimus
FD574350       --> ACCAGCACGAGAAGAGAGGATGATACCAACAATGAGACCGTACAGCGCAA  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN17140        --> GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EW714948       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EX746246       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FY452829       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD963543       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD978175       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD570320       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EX754211       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD541131       <-- GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EY929632       <-- ..................................................
EW719742       --> GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EX774865       --> GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
EX750699       --> GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD537488       --> GTGCTTCAGCAAAAATGAGAATCAAAATCATTCCCACAAACAGCTTCGGT
FD959825       --> ..................................................
FD574350       --> GTGCTTCAGCAAAAATGAAAATCAAAATCATTCCCACAAACAGCTTCGGT

               351    -    401
UN17140        --> TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. landra
EW714948       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus sativus var. oleiformis
EX746246       <-- TGTTGTGCATTCGCTCTAAAACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. maritimus
FY452829       <-- TGCTGTGCATTCGCTCTAACACCAGCGTCGCCGACGATACCAAT......  Raphanus sativus cv GSK3-1
FD963543       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. maritimus
FD978175       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570320       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus sativus cv Early Scarlet Globe
EX754211       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCGCCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541131       <-- TGTTGTGCATTCGCTCTAACACCAGCGTCGCCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929632       <-- ..................................................  Raphanus sativus var. oleiformis
EW719742       --> TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus sativus var. oleiformis
EX774865       --> TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. landra
EX750699       --> TGTTGTGCATTCGCTCTAAAACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. maritimus
FD537488       --> TGTTGTGCATTCGCTCTAACACCAGCGTCGCCGACGATACCAATAGCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959825       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD574350       --> TGTTGTGCATTCGCTCTAACACCAGCGTCACCGACGATACCAATAGCCAT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN17140        --> ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
EW714948       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
EX746246       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FY452829       <-- ..................................................
FD963543       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FD978175       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FD570320       <-- ACCAGCTGAAAGACCGGCGAGACCACAAGCTAGACCGGAAGAGAGATGAG
EX754211       <-- ACCGGCGGAGAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FD541131       <-- ACCGGCGGAGAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
EY929632       <-- ..........................AAGCGAGACCGGAAGATAGATGAG
EW719742       --> ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
EX774865       --> ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
EX750699       --> ACCAGCTGAAAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FD537488       --> ACCGGCGGAGAGACCGGCGAGACCACAAGCGAGACCGGAAGATAGATGAG
FD959825       --> ..................................................
FD574350       --> ACCAGCTGAAAGACCGGCGAGACCACAAGCTAGACCGGAAGAAAGATGAG

               451    -    501
UN17140        --> CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- CATATCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. landra
EW714948       <-- CATAGCCATCGAATAGATAGTAAGACTTGGCCCTGGGGTTGATTCCGGTA  Raphanus sativus var. oleiformis
EX746246       <-- CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. maritimus
FY452829       <-- ..................................................  Raphanus sativus cv GSK3-1
FD963543       <-- CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. maritimus
FD978175       <-- CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570320       <-- CATATCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus sativus cv Early Scarlet Globe
EX754211       <-- CATAGCCATCGAATAGATAGTACGACTTGGCCTTAGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541131       <-- CATAGCCATCGAATAGATAGTACGACTTGGCCTTAGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929632       <-- CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus sativus var. oleiformis
EW719742       --> CATAGCCATCGAATAGATAGTAAGACTTGGCCCTGGGGTTGATTCCGGTA  Raphanus sativus var. oleiformis
EX774865       --> CATATCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. landra
EX750699       --> CATAGCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. maritimus
FD537488       --> CATAGCCATCGAATAGATAGTACGACTTGGCCTTAGGGTTGATTCCGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959825       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD574350       --> CATATCCATCGAATAGATAGTAAGACTTGGCCTTGGGGTTGATTCCGGTA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN17140        --> CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EW714948       <-- CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EX746246       <-- CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
FY452829       <-- ..................................................
FD963543       <-- CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
FD978175       <-- CCGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
FD570320       <-- CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EX754211       <-- CTGATGATGACAGCAATGATCAGACCGTAAATACCTAACACACCAGCCAT
FD541131       <-- CTGATGATGACAGCAATGATCAGACCGTAAATACCTAACACACCAGCCAT
EY929632       <-- -TGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EW719742       --> CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EX774865       --> CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
EX750699       --> CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT
FD537488       --> CTGATGATGACAGCAATGATCAGACCGTAAATACCTAACACACCAGCCAT
FD959825       --> ..................................................
FD574350       --> CTGATGATGACAGCAATGATCAGACCATAGATACCTAAAACACCAGCCAT

               551    -    601
UN17140        --> AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EW714948       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EX746246       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FY452829       <-- ..................................................
FD963543       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FD978175       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FD570320       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCAGGTCTCATCACACCCA
EX754211       <-- AACAACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FD541131       <-- AACAACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EY929632       <-- AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EW719742       --> AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EX774865       --> AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
EX750699       --> AACCACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FD537488       --> AACAACGGGAACAATCGATTTCATCACAAGCTCTGGTCTCATCACACCCA
FD959825       --> ..................................................
FD574350       --> AACCACGGGAACAATCGATTTCATCACAAGCTCAGGTCTCATCACACCCA

               601    -    651
UN17140        --> TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. landra
EW714948       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus sativus var. oleiformis
EX746246       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. maritimus
FY452829       <-- ..................................................  Raphanus sativus cv GSK3-1
FD963543       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTACTCCCATA  Raphanus raphanistrum subsp. maritimus
FD978175       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570320       <-- TCGACGCCACACCGACCCCGCTCTTCGCTGTCCCGTACGCTGCTCCCATA  Raphanus sativus cv Early Scarlet Globe
EX754211       <-- TCGACGCCACACCAACACCGCTCTTCGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541131       <-- TCGACGCCACACCAACACCGCTCTTCGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929632       <-- TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus sativus var. oleiformis
EW719742       --> TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus sativus var. oleiformis
EX774865       --> TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. landra
EX750699       --> TCGACGCCACACCGACCCCGCTCTTTGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. maritimus
FD537488       --> TCGACGCCACACCAACACCGCTCTTCGCTGTCCCGTACGCTGCTCCCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD959825       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD574350       --> TCGACGCCACACCGACCCCGCTCTTCGCTGTCCCGTACGCTGCTCCCATA  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN17140        --> CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EW714948       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EX746246       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FY452829       <-- ..................................................
FD963543       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FD978175       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FD570320       <-- CATGAGAAAAAGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EX754211       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FD541131       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EY929632       <-- CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EW719742       --> CAGGAGAAGACGAGAGCGGCGGCAGCGC......................
EX774865       --> CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
EX750699       --> CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FD537488       --> CAGGAGAAGACGAGAGCGGCGGCAGCGCCGAGGAATCCGAAGAAAGGAGC
FD959825       --> ..................................................
FD574350       --> CATGAGAAaaa.......................................

               701    -    751
UN17140        --> AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
EW714948       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
EX746246       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
FY452829       <-- ..................................................
FD963543       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
FD978175       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
FD570320       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTCTCCGATGAGATC
EX754211       <-- AGTTTCATCTCCGCTGAAACCTGAAGCCATTAGCTCTC--Caat......
FD541131       <-- AGTTTCATCTCCGCTGAAACCTGAAGCCATTAGCTCTC--CAATGAGATC
EY929632       <-- AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTA.......
EW719742       --> ..................................................
EX774865       --> AGTTTCATCGCCGCTGAAAC..............................
EX750699       --> AGTTTCATCGCCGCTGAAACCTGAAGCCATTAGCTCTC--CTATGAGATC
FD537488       --> AGTTTCATCTCCGCTGAAACCTGAAGCCATTAGCTCTC--CAATGAGATC
FD959825       --> ..................................................
FD574350       --> ..................................................

               751    -    801
UN17140        --> TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAGCGAGAGAGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- T.................................................
EW714948       <-- TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAGCGAGAGcc....
EX746246       <-- TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAGCGAGAGAGGGAG
FY452829       <-- ..................................................
FD963543       <-- TGATCGCAAAGAGACGAAACTGTTTGATGATTT.................
FD978175       <-- TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAGtcc.........
FD570320       <-- TGATCGCAAAGAGACAAAACTGTTTGATGATTT.................
EX754211       <-- ..................................................
FD541131       <-- TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAACGAacgacccc.
EY929632       <-- ..................................................
EW719742       --> ..................................................
EX774865       --> ..................................................
EX750699       --> TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAGCGAG........
FD537488       --> TGATCGCAAAGAGACGAAACTGTTTGATGATTTGCGAACGAacgacccc.
FD959825       --> ..................................................
FD574350       --> ..................................................

               801    -    851
UN17140        --> AGAGACAAAACTTATTATGTTTAACAATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX770715       <-- ...............................
EW714948       <-- ...............................
EX746246       <-- AGAGACAAAACTTATTATGTTTAACAATCCC
FY452829       <-- ...............................
FD963543       <-- ...............................
FD978175       <-- ...............................
FD570320       <-- ...............................
EX754211       <-- ...............................
FD541131       <-- ...............................
EY929632       <-- ...............................
EW719742       --> ...............................
EX774865       --> ...............................
EX750699       --> ...............................
FD537488       --> ...............................
FD959825       --> ...............................
FD574350       --> ...............................