1      -     51
UN17160        --> GGACTGTCGTCTCCGTCAACCTCTCTATCTTTCGTCTCCATAGCCTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- GGACTGTCGTCTCCTTCAACCTCTCTATCGTTCGTCTCTGTAGCCTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539796       <-- GGACTGTCGTCTCCGTCAACCTCTCTATCTTTCGTCTCTATAGCCTGCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899099       <-- .....................gggtcgTCTCTCATCTCCATAGCCTACCT  Raphanus sativus cv Early Scarlet Globe
FD529586       <-- ..................ggactgtcgTCTCTCATCTCCATAGCCTACCT  Raphanus raphanistrum subsp. maritimus
FD552810       <-- .........................ggTCTCTCGTCTCCATAGCCTACCT  Raphanus raphanistrum subsp. landra
EY918077       <-- ................................gaTCTCCATAGCCTACCT  Raphanus raphanistrum subsp. landra
FD566059       <-- ..............................gggaTCTCCATAGCCTACCT  Raphanus sativus var. oleiformis
EV574451       <-- ....................................gggATAGCCTACCT  Raphanus raphanistrum subsp. landra
EV538467       --> GGACTGTCGTCTCCTTCAACCTCTCTATCGTTCGTCTCTGTAGCCTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548492       --> GGACTGTCATCTCCGTCAACCTCTCTATCTTTCGTCTCTATAGCCTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978331       --> GGACTGTCGTCTCCGTCAACCTCTCTATCTTTCGTCTCTATAGCCTGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544126       --> gggCTGTCGTCTCCGTCAACCTCTCTATCTTTCGTCTCTATAGCCTGCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731937       --> .....................gggtcgTCTCTCATCTCCATAGCCTACCT  Raphanus sativus cv Rat-Tail Radish #3870
EX894837       --> .....................gggtcgTCTCTCATCTCCATAGCCTACCT  Raphanus sativus cv Early Scarlet Globe
FD533393       --> ..................ggactgtcgTCTCTCATCTCCATAGCCTACCT  Raphanus raphanistrum subsp. maritimus
FD556520       --> .........................ggTCTCTCGTCTCCATAGCCTACCT  Raphanus raphanistrum subsp. landra
EX888908       --> .............................ggtcaTCTCCATAGCCTACCT  Raphanus sativus var. oleiformis
EY922035       --> ................................gaTCTCCATAGCCTACCT  Raphanus raphanistrum subsp. landra
FD562057       --> ..............................gggaTCTCCATAGCCTACCT  Raphanus sativus var. oleiformis
EV570063       --> ....................................gggATAGCCTACCT  Raphanus raphanistrum subsp. landra
EY923550       --> .....................................ggATAGCCTACCT  Raphanus raphanistrum subsp. landra
EY924574       --> .....................................ggATAGCCTACCT  Raphanus raphanistrum subsp. landra
EW731900       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY432302       --> ..................................................  Raphanus sativus cv GSK3-1
FY432118       --> ..................................................  Raphanus sativus cv GSK3-1
EX748541       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN17160        --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD539796       <-- GCCGATTGTTACCTGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EX899099       <-- GCCGATTGTTACCCGTTTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD529586       <-- GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD552810       <-- GCCGATTGTTACCCGTCTCCGCCGATAACACCATGGCGCCAAAGAAGGAT
EY918077       <-- GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD566059       <-- GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EV574451       <-- GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EV538467       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD548492       --> GCCGATTGTTACCTGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD978331       --> GCCGATTGTTACCTGTCTCC-TCGATAACACCATGGCGCCAAAGAAGGAT
FD544126       --> GCCGATTGTTACCTGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EW731937       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EX894837       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD533393       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD556520       --> GCCGATTGTTACCCGTCTCCGCCGATAACACCATGGCGCCAAAGAAGGAT
EX888908       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EY922035       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FD562057       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EV570063       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EY923550       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EY924574       --> GCCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
EW731900       --> .CCGATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FY432302       --> ...GATTGTTACCCGTCTCCGTCGATAACACCATGGCGCCAAAGAAGGAT
FY432118       --> .............CGTCTCCGTCGATAACACCATGGCGCCAAAGAACGAT
EX748541       --> ..................................................

               101    -    151
UN17160        --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD539796       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EX899099       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD529586       <-- AAGGTTCCGCCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD552810       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EY918077       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD566059       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EV574451       <-- AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EV538467       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD548492       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD978331       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD544126       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EW731937       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EX894837       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD533393       --> AAGGTTCCGCCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD556520       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EX888908       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EY922035       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FD562057       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EV570063       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EY923550       --> AAGGTTCCACCGCCGTCGTCAAAGCTGGCTAAATCCGGAGGTGGAAAACA
EY924574       --> AAGGTTCCACCGCCGTCGTCAAAGCTGGCTAAATCCGGAGGTGGAAAACA
EW731900       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FY432302       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
FY432118       --> AAGGTTCCACCGCCGTCGTCAAAGCCGGCTAAATCCGGAGGTGGAAAACA
EX748541       --> ..................................................

               151    -    201
UN17160        --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD539796       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EX899099       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD529586       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD552810       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EY918077       <-- GAAGAAGA---AGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD566059       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EV574451       <-- GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EV538467       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD548492       --> GAAGAAGAAG---TGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD978331       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD544126       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EW731937       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EX894837       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD533393       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD556520       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EX888908       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EY922035       --> GAAGAAGAAG---TGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FD562057       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EV570063       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EY923550       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EY924574       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EW731900       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FY432302       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
FY432118       --> GAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACA
EX748541       --> ..................................................

               201    -    251
UN17160        --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTAACCGAGGCTCCC
FD539796       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCCCCC
EX899099       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD529586       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD552810       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EY918077       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD566059       <-- TGGTGTTGTTTGATCAGACTACTTACGACAAGCTTCTCACTGAGGCTCCC
EV574451       <-- TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EV538467       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTAACCGAGGCTCCC
FD548492       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD978331       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD544126       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCCCCC
EW731937       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EX894837       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD533393       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD556520       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EX888908       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EY922035       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FD562057       --> TGGTGTTGTTTGATCAGACTACTTACGACAAGCTTCTCACTGAGGCTCCC
EV570063       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EY923550       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EY924574       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EW731900       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FY432302       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
FY432118       --> TGGTGTTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAGGCTCCC
EX748541       --> ..................................................

               251    -    301
UN17160        --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCTGACCGTATGAGGATCAA
FD539796       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EX899099       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD529586       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD552810       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EY918077       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD566059       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EV574451       <-- AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EV538467       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCTGACCGTATGAGGATCAA
FD548492       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD978331       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD544126       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EW731937       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EX894837       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD533393       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD556520       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EX888908       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EY922035       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FD562057       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EV570063       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EY923550       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EY924574       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EW731900       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FY432302       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
FY432118       --> AAGTTCAAGCTCATCACCCCTTCCATTCTCTCCGACCGTATGAGGATCAA
EX748541       --> ..................................................

               301    -    351
UN17160        --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD539796       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EX899099       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD529586       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD552810       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EY918077       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD566059       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EV574451       <-- CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EV538467       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD548492       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD978331       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD544126       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EW731937       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EX894837       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD533393       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD556520       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EX888908       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EY922035       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FD562057       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EV570063       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EY923550       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EY924574       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EW731900       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FY432302       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
FY432118       --> CGGGTCTCTTGCAAGGAAGGCAATAAGGGAGCTAATGGCTAAAGGTGTGA
EX748541       --> ..................................................

               351    -    401
UN17160        --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD539796       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EX899099       <-- TCAGGTTGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD529586       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD552810       <-- CCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EY918077       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD566059       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EV574451       <-- TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EV538467       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD548492       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD978331       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD544126       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EW731937       --> TCATCATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EX894837       --> TCAGGTTGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD533393       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD556520       --> CCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EX888908       --> TCAGGATGGTCTCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EY922035       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FD562057       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EV570063       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EY923550       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EY924574       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EW731900       --> TCATCATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FY432302       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
FY432118       --> TCAGGATGGTCGCTGCTCACTCGAGCCAGCAGATCTACACTCGTGCCACC
EX748541       --> ..........................................GTGCCACC

               401    -    451
UN17160        --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGGTTCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGGTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539796       <-- AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTTGTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899099       <-- AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv Early Scarlet Globe
FD529586       <-- AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. maritimus
FD552810       <-- AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus raphanistrum subsp. landra
EY918077       <-- AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
FD566059       <-- AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus var. oleiformis
EV574451       <-- AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
EV538467       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGGTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548492       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTACTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978331       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTACTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544126       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTTGTTCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731937       --> AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX894837       --> AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv Early Scarlet Globe
FD533393       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. maritimus
FD556520       --> AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus raphanistrum subsp. landra
EX888908       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus sativus var. oleiformis
EY922035       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
FD562057       --> AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus var. oleiformis
EV570063       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
EY923550       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
EY924574       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. landra
EW731900       --> AACACCTAAACAAAACAGATCGACC-CT-TGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FY432302       --> AACACCTAAACAAAACAGATCGACCCTTGTGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv GSK3-1
FY432118       --> AACACCTAAACAAAACAGATCGACCCTTGTGTCAATGTTTTGGTTCTCCA  Raphanus sativus cv GSK3-1
EX748541       --> AACACCTAAACAAAACAGATCGACC-TT-TGTCAATGTTTTGCTTCTCCA  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN17160        --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- GTCTTAATCTCTTTTGATGTATACGTTAG-TCATCAGAGCTCTTTATAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539796       <-- GTCT-AATCTCTTTTGACGTATACGTTACCTCATCAGAGCTCTTA-TAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899099       <-- GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv Early Scarlet Globe
FD529586       <-- GTCT-AATCTCTTTTGATGTATACGTTAC-TCTTCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. maritimus
FD552810       <-- GTCTTAATCTCTTTTGATGTATACGCTAC-TCATCAGAGCTCTTA-TAGT  Raphanus raphanistrum subsp. landra
EY918077       <-- GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
FD566059       <-- GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus var. oleiformis
EV574451       <-- GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
EV538467       --> GTCTTAATCTCTTTTGATGTATACGTTAG-TCATCAGAGCTCTTTATAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548492       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978331       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544126       --> GTCT-AATCTCTTTTGACGTATACGTTACCTCATCAGAGCTCTTA-TAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731937       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX894837       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv Early Scarlet Globe
FD533393       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCTTCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. maritimus
FD556520       --> GTCTTAATCTCTTTTGATGTATACGCTAC-TCATCAGAGCTCTTA-TAGT  Raphanus raphanistrum subsp. landra
EX888908       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTA-TAGT  Raphanus sativus var. oleiformis
EY922035       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
FD562057       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus var. oleiformis
EV570063       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
EY923550       --> GTCT-AATCTCTTTTGACGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
EY924574       --> GTCT-AATCTCTTTTGACGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. landra
EW731900       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv Rat-Tail Radish #3870
FY432302       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv GSK3-1
FY432118       --> GTCTTAATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTTATAGT  Raphanus sativus cv GSK3-1
EX748541       --> GTCT-AATCTCTTTTGATGTATACGTTAC-TCATCAGAGCTCTTAATAGT  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN17160        --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- TCTTT-ATGTTATGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD539796       <-- TTTTTTATGTT-TGAACTCCTT-C----GTACCTCGAGAAACTCTTTAGA
EX899099       <-- TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD529586       <-- TCTTTTATGTT-CGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD552810       <-- TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EY918077       <-- TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD566059       <-- TCTTTTATGTT-TGAACTCCTT-CCTTCGTAC-TCGAGAAACTCTTTAGA
EV574451       <-- TCTTTTATGTC-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EV538467       --> TCTTT-ATGTTATGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD548492       --> TCT-CTATGTT-TGAACTCCTTTC----GTAC-TCGAGAAACTCTTTAGA
FD978331       --> TCT-CTATGTT-TGAACTCCTTTC----GTAC-TCGAGAAACTCTTTAGA
FD544126       --> TTTTTTATGTT-TGAACTCCTT-C----GTACCTCGAGAAACTCTTTAGA
EW731937       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EX894837       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD533393       --> TCTTTTATGTT-CGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD556520       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EX888908       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EY922035       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FD562057       --> TCTTTTATGTT-TGAACTCCTT-CCTTCGTAC-TCGAGAAACTCTTTAGA
EV570063       --> TCTTTTATGTC-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EY923550       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EY924574       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
EW731900       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA
FY432302       --> TCTTTTATGTT-TGAACTCCTT-CCTTCGTAC-TCGAGAAACTCTTTAGA
FY432118       --> TCTTTTATGTT-TGAACTCCTT-CCTTCGTAC-TCGAGAAACTCTTTAGA
EX748541       --> TCTTTTATGTT-TGAACTCCTT-C----GTAC-TCGAGAAACTCTTTAGA

               551    -    601
UN17160        --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542467       <-- AGTCTGTTTTGAGATATTATGTCTACTTAATATTCCG-AATTGATTTTat  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539796       <-- AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCG-AATTGATTTTTt  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899099       <-- AGGCCGTTTTGAGATATTATGTCTACTTAATATTCTGAATTTGATTTTg.  Raphanus sativus cv Early Scarlet Globe
FD529586       <-- AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTT..  Raphanus raphanistrum subsp. maritimus
FD552810       <-- AGGCCGTTTTGAGATATTATGTCTACTT......................  Raphanus raphanistrum subsp. landra
EY918077       <-- AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
FD566059       <-- AGGCTGTTTTGAGATATTc...............................  Raphanus sativus var. oleiformis
EV574451       <-- AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
EV538467       --> AGTCTGTTTTGAGATATTATGTCTACTTAATATTCCG-AATTGATTTTat  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548492       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGaattagtttt...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978331       --> AGGCTGTTTTGAG.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544126       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCG-AATTGATTTTTt  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731937       --> AGGCCGTTTTGAGATATTATGTCTACTTAATATTCTGAATTTGATTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX894837       --> AGGCCGTTTTGAGATATTATGTCTACTTAATATTCTGAATTTGATTTTg.  Raphanus sativus cv Early Scarlet Globe
FD533393       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTT..  Raphanus raphanistrum subsp. maritimus
FD556520       --> AGGCCGTTTTGAGATATTATGTCTACTT......................  Raphanus raphanistrum subsp. landra
EX888908       --> AGGCTGTTTTGAGATATTATGTTTACTTAATATTC...............  Raphanus sativus var. oleiformis
EY922035       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
FD562057       --> AGGCTGTTTTGAGATATTc...............................  Raphanus sativus var. oleiformis
EV570063       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
EY923550       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
EY924574       --> AGGCTGTTTTGAGATATTATGTCTACTTAATATTCCGGAATTGATTTTTA  Raphanus raphanistrum subsp. landra
EW731900       --> AGGCCGTTTTGAGATATTATGTCTACTTAATATTCTGAATTTGATTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FY432302       --> AGGCTGTTTTGAGATATTCTTTCTACTTAATCTTC-GGAATTGATTTT..  Raphanus sativus cv GSK3-1
FY432118       --> AGGCTGTTTTGAGATATTCTTTCTACTTAATCTTC-GGAATTGATTTT..  Raphanus sativus cv GSK3-1
EX748541       --> AGGCTGTTTTGAG.....................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN17160        --> TATTTGTTCCC..
                   ~~~~~~~~~~~~~
EV542467       <-- .............
FD539796       <-- .............
EX899099       <-- .............
FD529586       <-- .............
FD552810       <-- .............
EY918077       <-- TATTTGTTCCCtc
FD566059       <-- .............
EV574451       <-- TATTTGTTCCCcc
EV538467       --> .............
FD548492       --> .............
FD978331       --> .............
FD544126       --> .............
EW731937       --> TATTTGCTCCC..
EX894837       --> .............
FD533393       --> .............
FD556520       --> .............
EX888908       --> .............
EY922035       --> TATTTGTTCCCtc
FD562057       --> .............
EV570063       --> TATTTGTTCCCcc
EY923550       --> TATTTGTTCCCtc
EY924574       --> TATTTGTTCCCtc
EW731900       --> TATTTGCTCCC..
FY432302       --> .............
FY432118       --> .............
EX748541       --> .............