RadishBase

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Alignment for radish unigene UN17166

               1      -     51
UN17166        --> AATTGAGTCTCAATGGGTTGCTCAAGAGTGGATCTATTGTTGGTCCATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> AATTGAGTCTCAATGGGTTGCTCAAGAGTGGATCTATTGTTGGTCCATAG
FD552454       --> ....GAGTCTCAATGGGTTGCTCAAGAGTGGATCTATTGTTGGTCCATAG
EV544549       --> ..............GGGTTGCTCAAGAGTGGATCTATTGTTGGTCCATAG
FD976126       --> ...............GGTTGCTCAAGAGTGGATCTATTGTTGGTCCATAG
FD565141       --> ..........................gGTGGATCTATTGTTGGTCCATAG
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               51     -    101
UN17166        --> AAAGAACGTACAGATGAGAGAGTATCAGAAAGTCAGGAATTTATCAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..........................................ATCAAAGT
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> AAAGAACGTACAGATGAGAGAGTATCAGAAAGTCAGGAATTTATCAAAGT
FD552454       --> AAAGAACGTACAGATGAGAGGGTATCAGAAAGTCAGGAATTTATCAAAGT
EV544549       --> AAAGAACGTACAGATGAGAGAGTATCAGAAAGTCAGGAATTTATCAAAGT
FD976126       --> AAAGAACGTACAGATGAGAGAGTATCAGAAAGTCAGGAATTTATCAAAGT
FD565141       --> AAAGAACGTACAGATGAGAGAGTATCAGAAAGTCACGAATTTATCAAAGT
EV540122       --> .......................ATCAGGAAGTCAGGAATTTATCAA-GT
FD539228       --> .........................CAGAAAGTCAGAAATTTATGAAAGT
EX752071       --> .........................................cATCAAAGT
FD945359       --> ..........................................ATCAAAGT
FY439947       --> ..........................................ATCAAAGT
EX892907       --> ............................................CAAAGT
FD967811       --> ..........................................gtgAAAGT
FD968203       --> ..........................................gtgAAAGT
EV541734       --> ...............................................AGT
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               101    -    151
UN17166        --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTT--GGT  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ............................CACCATATTCTTTTTTT--GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ......................................TTTTTTTT-GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ......................................TTTTTTTT-GGT  Raphanus sativus var. oleiformis
EV550655       <-- ...............................................GGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- .................................................T  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTT--GGT  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. landra
EV544549       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTA-GGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> CTAAAAGAGGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus sativus var. oleiformis
EV540122       --> CTAAAAGAAGCTGCCAC--ACATCATTTCACCATATTCTTTTTTTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. maritimus
FD945359       --> CTAAAAGGAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTT--GGT  Raphanus sativus cv Early Scarlet Globe
FY439947       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTTTGGT  Raphanus sativus cv GSK3-1
EX892907       --> CTAAAAGAAGCTGCCACGCCCACCATTTCACCATATTCTTTTTTTTTGGT  Raphanus sativus var. oleiformis
FD967811       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> CTAAAAGAAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> .......gAGCTGCCACGCCCATCATTTCACCATATTCTTTTTTTTTGGT  Raphanus sativus cv GSK3-1
EV540551       --> ...................gCATCATTTCACCATATTCTTTTTTTT-GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ............................CACCATATTCTTTTTTT--GGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ...............................................GGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN17166        --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus var. oleiformis
EV550655       <-- AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- .........................................ATAATTCTT  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus raphanistrum subsp. landra
EV544549       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus var. oleiformis
EV540122       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus raphanistrum subsp. maritimus
FD945359       --> AGCTAAAAAAGTTCTAATATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv Early Scarlet Globe
FY439947       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv GSK3-1
EX892907       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus var. oleiformis
FD967811       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTGAAATAATTCTT  Raphanus sativus cv GSK3-1
EV540551       --> AGCTAAAAAAGTTCTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> AGCTAAAAAAGTACTAACATCCCCAACAAACTAGCGCTAAAATAATTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN17166        --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- TAAAAGAAAGAAAAACAAA-TACGATTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTC-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus var. oleiformis
EV550655       <-- TAAAAGAAAGAAACACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> TAAAAGAAAGAAAAACAAA-TACGATTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus raphanistrum subsp. landra
EV544549       --> TAAAAGAAAGAAACACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> TAAAAGAAAGAAACACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus var. oleiformis
EV540122       --> TAAAAGAAAGAAACACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> TAAAAGAAAGAAAAACAAA-TACAACTCTGAAAACTTGTTGAATCCTTCA  Raphanus raphanistrum subsp. maritimus
FD945359       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv Early Scarlet Globe
FY439947       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv GSK3-1
EX892907       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus var. oleiformis
FD967811       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> TAAAAGAAAGAAAAACAAA-TACGACTCTGAAAACTTGTTGAATCCTTCA  Raphanus sativus cv GSK3-1
EV540551       --> TAAAAGAAAGAAACACAAA-TACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> TAAAAGAAAGAAAAACAAAATACGACTCTGAAAACTTGTTGGATCCTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN17166        --> T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- T----AATCTCCACCTTATTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- T----AATCTCCACCT---TCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- -----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- T----AATCTCCACCTTCTTCGGCTTAGGGCTCGTCATGGGCGGCATCAT  Raphanus sativus var. oleiformis
EV550655       <-- TTCATAATCTCCACCTTATTCGGCTTAGAGCTCGTCATGGGCGGAATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ....................CGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. landra
EV544549       --> TTCATAATCTCCACCTTATTCGGCTTAGAGCTCGTCATGGGCGGAATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> TTCATAATCTCCACCTTATTCGGCTTAGAGCTCGTCATGGGCGGAATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus sativus var. oleiformis
EV540122       --> TTCATAATCTCCACCTTATTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. maritimus
FD945359       --> T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv Early Scarlet Globe
FY439947       --> T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv GSK3-1
EX892907       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus sativus var. oleiformis
FD967811       --> T----AATCTC-ACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> T----AATCTCCACCTTCTTCGGCTTAGAGCTCGTCATGGGCGGCATCAT  Raphanus sativus cv GSK3-1
EV540551       --> TTCATAATCTCCACCTTATTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> T----AATCTCCACCTTC---GGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> T----AATCTCCACCTTCTTCGGCTTAAAGCTCGTCATGGGCGGCATCAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN17166        --> CCTTGTCTGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- CCTTGTCTGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- CTTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus var. oleiformis
EV550655       <-- CCTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- C-TTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..........................................ATTCAGTG  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. landra
EV544549       --> CCTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> CCTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus var. oleiformis
EV540122       --> CCTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> CTTTGTCTGAGGGGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. maritimus
FD945359       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv Early Scarlet Globe
FY439947       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv GSK3-1
EX892907       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATACAGTG  Raphanus sativus var. oleiformis
FD967811       --> CTTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> CTTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> CTTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> CCTTGTCCGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus sativus cv GSK3-1
EV540551       --> CCTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> CCTTGTCTGAGGAGGCTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> CTTTGTCTGAGGAGGTTTCTTCCTTGGTTTCCTCAGTTTTTGATTCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN17166        --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus var. oleiformis
EV550655       <-- TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- TCGGATTCATCTCCTTCATGGTCATCGTCACCTTGTTCATCCTCAGCATC  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- TCGGATTCATCTCTTTCATGGTCATCGTCGTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- TCGGATTCATCTC-TTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. landra
FD980198       <-- ....................................TCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. landra
EV544549       --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus var. oleiformis
EV540122       --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. maritimus
FD945359       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv Early Scarlet Globe
FY439947       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv GSK3-1
EX892907       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus var. oleiformis
FD967811       --> TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCAT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> TCGGATTCATCTCCTTCATGGTCATCGTCATCTTGTTCATCCTCAGCATC  Raphanus sativus cv GSK3-1
EV540551       --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> TCGGATTCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> TCGGAATCATCTCCTTCATGGTCATCGTCCTCTTGTTCATCCTCAGCATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN17166        --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCc
FD971042       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD544343       <-- AGAATCAGCAGCAGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD939517       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV550655       <-- AGAATCAGCAGCGGGAGCc...............................
FD947868       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD949386       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV536011       <-- AGAATCAGCAGCGAGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD556092       <-- AGAATCAGCAGCGGGAGCATC-TTTGATTCCTCTTCCTCTCGCTTCTTCT
FD980198       <-- AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV536477       <-- ..........................gaTCCTCTTCCTCTCTCTTCTTCT
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCC
FD552454       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCGCTTCTTCT
EV544549       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD976126       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD565141       --> AGAATCAGCAGCCGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV540122       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD539228       --> AGAATCAGCAGCAGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EX752071       --> AAAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD945359       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCCCTCTCTTCTTCT
FY439947       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EX892907       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD967811       --> AGAATCAGCAGCAGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD968203       --> AGAATCAGCAGCAGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV541734       --> AGAATCAGCAGCAGGAGCATCCTTTGATCCCTCTTCCTCTCTCTTCTTCT
FY434347       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV540551       --> AGAATCAGCAGCGAGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
FD967275       --> AGAATCAGCAGCGGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT
EV540915       --> AGAATCAGCAGCAGGAGCATCCTTTGATTCCTCTTCCTCTCTCTTCTTCT

               451    -    501
UN17166        --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- c.................................................
FD971042       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCCTTCCCCAGGTT
FD544343       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD939517       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV550655       <-- ..................................................
FD947868       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD949386       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV536011       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD556092       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD980198       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV536477       <-- CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD552454       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV544549       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD976126       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD565141       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV540122       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD539228       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EX752071       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD945359       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FY439947       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EX892907       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD967811       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD968203       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV541734       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FY434347       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
EV540551       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT
FD967275       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCCTTCCCCAGGTT
EV540915       --> CAGCTTCGTCGAATGCTGCTTTCTCAGCATCCTTGAGCTTTCCCCAGGTT

               501    -    551
UN17166        --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- TCCTCAGCCAACTTCTTAGCATACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. landra
FD980198       <-- TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- ..................................................  Raphanus sativus var. oleiformis
FD981697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV535442       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- ..................................................  Raphanus sativus var. oleiformis
FD560809       <-- ..................................................  Raphanus sativus var. oleiformis
FD986729       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. landra
EV544549       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> CCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus var. oleiformis
EV540122       --> TCCTCAGCCAACTTCTTAGCATACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAAACTAAGACATT  Raphanus raphanistrum subsp. maritimus
FD945359       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv Early Scarlet Globe
FY439947       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv GSK3-1
EX892907       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAAACTAAGACATT  Raphanus sativus var. oleiformis
FD967811       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAAACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> TCCTCAGCCAACTTCTTAGCGTAGTCAGGGTCATCGCAGACTAAGACATT  Raphanus sativus cv GSK3-1
EV540551       --> TCCTCAGCCAACTTCTTAGCATACTCAGGGTCATCGCAAACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAAGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> TCCTCAGCCAACTTCTTAGCGTACTCAGGGTCATCGCAGACTAATACATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN17166        --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- GTCGAACAATGATCCTGATTTCACCTGCCACAACTCTACTCCAACATACT
FD544343       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD939517       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV550655       <-- ..................................................
FD947868       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD949386       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV536011       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD556092       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCGACATACT
FD980198       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV536477       <-- GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD563540       <-- ......................caCTGCCACAACTCTACTCCAACATACT
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> GTCGAACAGTGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD552454       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCGACATACT
EV544549       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD976126       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD565141       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV540122       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD539228       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACA....
EX752071       --> GTCGAACAATGATCCAAATTTCACCTGCCACAACTCTACTCCAACATACT
FD945359       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FY439947       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EX892907       --> GTCGAACAATGATCCAAATTTCACCTGCCACAACTCTACTCCAACATACT
FD967811       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD968203       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV541734       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FY434347       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
EV540551       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT
FD967275       --> GTCGAACAATGATCCTGATTTCACCTGCCACAACTCTACTCCAACATACT
EV540915       --> GTCGAACAATGATCCAGATTTCACCTGCCACAACTCTACTCCAACATACT

               601    -    651
UN17166        --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD544343       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD939517       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV550655       <-- ..................................................
FD947868       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD949386       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV536011       <-- TAAATTTGAAGACATAGAGTTCTGGGTCACCCTTGAAGTCAGGGTTGTCA
FD556092       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD980198       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV536477       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD563540       <-- TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EX889110       <-- ...................................AAGTCAGGGT-GTCA
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD552454       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV544549       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD976126       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD565141       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV540122       --> TAAATTTGAAGACATAGAATTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD539228       --> ..................................................
EX752071       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD945359       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FY439947       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EX892907       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD967811       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD968203       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV541734       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FY434347       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV540551       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
FD967275       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA
EV540915       --> TAAATTTGAAGACATAGAGTTCTGGGTCATCCTTGAAGTCAGGGTTGTCA

               651    -    701
UN17166        --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGG...............
FD544343       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD939517       <-- ATCATTGGAGCCTTCCATTTTCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV550655       <-- ..................................................
FD947868       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD949386       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV536011       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD556092       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD980198       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV536477       <-- ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD563540       <-- ATCATTGGAGCTTTCCATTTTCCCTTGTAGTTAGGGTTCTTGATTTCCTT
EX889110       <-- ATCATTGGAGC-TTCCATT-G-CCTTGTAGTTAGGGTTCTTGATTT-C-T
FD981697       <-- ..................................................
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD552454       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV544549       --> ATCATTGGAGCCTTCCGTTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD976126       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD565141       --> ATCATTGGAGCCTTCCATTTTCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV540122       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD539228       --> ..................................................
EX752071       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD945359       --> ATCATTGGAGCCTTCCATTTTCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FY439947       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EX892907       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD967811       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD968203       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV541734       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FY434347       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
EV540551       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT
FD967275       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGG...............
EV540915       --> ATCATTGGAGCCTTCCATTTGCCCTTGTAGTTAGGGTTCTTGATTTTCTT

               701    -    751
UN17166        --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD939517       <-- GGGCTTCCATTCACCGc.................................
EV550655       <-- ..................................................
FD947868       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD949386       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EV536011       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD556092       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD980198       <-- GGGCTTCCACTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EV536477       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD563540       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EX889110       <-- GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAGTGGTAGGGGCAGTCC
FD981697       <-- .......CATTCACCGTTGTACTCGGGGTTGAGAATG-TAGGGGCAGTCA
EX748011       <-- ..................................................
EV535442       <-- ..................................................
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> GGGCTc............................................
FD552454       --> GGGCT.............................................
EV544549       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD976126       --> GGGCTTCCACTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD565141       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EV540122       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD539228       --> ..................................................
EX752071       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD945359       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FY439947       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EX892907       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAGTGGTAGGGGCAGTCC
FD967811       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD968203       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EV541734       --> GGGCTTCCATTCACCGTCGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FY434347       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
EV540551       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC
FD967275       --> ..................................................
EV540915       --> GGGCTTCCATTCACCGTTGTACTCGGGGTTGGGAATGGTAGGGGCAGTCC

               751    -    801
UN17166        --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ACT...............................................
FD949386       <-- ACT...............................................
EV536011       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATTAGCG
FD556092       <-- ACTCACCATTTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD980198       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
EV536477       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD563540       <-- ACCCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
EX889110       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCGGGCTTCTTTGCATCAGCG
FD981697       <-- ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
EX748011       <-- ............CTTCATCATCCCAGTCCTCAG-CTTCTTTGCATCAGCG
EV535442       <-- ............tcTCATCATCCCAGTC-TCAGGCTTCTTTGCATCAGCG
EV537528       <-- ..................................................
EX762845       <-- ..................................................
EY931203       <-- ..................................................
FD560809       <-- ..................................................
FD986729       <-- ..................................................
FD543387       <-- ..................................................
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD976126       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAG-CTTCTTTGCATCA...
FD565141       --> ACTCACCA..........................................
EV540122       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD539228       --> ..................................................
EX752071       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FD945359       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FY439947       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCGGGCTTCTTTGCATCAGCG
EX892907       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCGGGCTTCTTTGCATCAGCG
FD967811       --> ACTCACCATCTTCTTCATCATCCCA.........................
FD968203       --> ACTCACCATCTTCTTCATCATCCCAGTCCT....................
EV541734       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG
FY434347       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCGGGCTTCTTTGCATCAGCG
EV540551       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATTAGCG
FD967275       --> ..................................................
EV540915       --> ACTCACCATCTTCTTCATCATCCCAGTCCTCAGGCTTCTTTGCATCAGCG

               801    -    851
UN17166        --> TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- TCTGGGATCTCCTc....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. landra
FD980198       <-- TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCT-C  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- TCTGGGATCTCCTTTGGGATGTCATCGTATCCGGCTGGCTTTGTGTCTTC  Raphanus sativus var. oleiformis
EX889110       <-- TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus var. oleiformis
FD981697       <-- TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- TCTGGGATCTC-TTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. maritimus
EV535442       <-- TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- .................GATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- .....................TCATCGTATCCAGCTG-C-TTGTGTCT-C  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- .....................TCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus var. oleiformis
FD560809       <-- ......................CATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus var. oleiformis
FD986729       <-- ...................................TGGCTTTGTGTCT-C  Raphanus raphanistrum subsp. landra
FD543387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- ..................................................  Raphanus sativus var. oleiformis
EY930360       <-- ..................................................  Raphanus sativus var. oleiformis
FD949753       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> TCTGGGATCTCCTTTGG.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTC...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. maritimus
FD945359       --> TCTGGGATCTCCTTTGGGATGCCATCGCATCCAGCTGGCTTTGTGTCT..  Raphanus sativus cv Early Scarlet Globe
FY439947       --> TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus cv GSK3-1
EX892907       --> TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> TCTGGGATCTCCTTTGGGATGTCATCGTATCCAGCTGGCTTTGTGTCTTC  Raphanus sativus cv GSK3-1
EV540551       --> TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> TCTGGGATCTCCTTTGGGATGTCATCATATCCAGCTGGCTTTGTGTCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN17166        --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD556092       <-- AGGGTCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD980198       <-- AGGATCAGGAATGTACTATTTGTCATCCCAGTCCTCAGGCTTCTTGG-GC
EV536477       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD563540       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EX889110       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD981697       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EX748011       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EV535442       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EV537528       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EX762845       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCT-GGCGC
EY931203       <-- AGGATCAGGAATGCACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD560809       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD986729       <-- AGGATCAGGAATGTACTCTTTGTCATCCCAGCCCTCAGGCTTCTTGGCGC
FD543387       <-- .............TACTCTT-GTCATCCCAGTC-TCAGGCTTCTTGGCGC
EV548975       <-- ..................................................
EY931413       <-- ..................................................
EY930360       <-- ..................................................
FD949753       <-- ..................................................
FD971774       <-- ..................................................
FD972293       <-- ..................................................
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCT...............
FD945359       --> ..................................................
FY439947       --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EX892907       --> AGatc.............................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FY434347       --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
EV540551       --> AGGATCAGGAATGTACTCTTTGTCATCCCAGTCCTCAGGCTTCTTGGCGC
FD967275       --> ..................................................
EV540915       --> AG................................................

               901    -    951
UN17166        --> TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAATCAGAGTAGAG
FD556092       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD980198       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EV536477       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD563540       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EX889110       <-- TTGGATCCTTAATCT--TGGGCTGGG-AGTAGATCCCAGTCGGAGTAGAG
FD981697       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EX748011       <-- TTGGATCTTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EV535442       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAATCAGAGTAGAG
EV537528       <-- TTGGATCTTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EX762845       <-- TTGGATC-TTAATCT-C-TGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EY931203       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGTAGATCCCAGTCGGAGTAGAG
FD560809       <-- TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD986729       <-- TTGGATC-TTAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD543387       <-- TTGGATC-ATAATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EV548975       <-- ..........AATCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EY931413       <-- ..........AATCT-CTTGGCTGGG-AGTAGATCCCAGTCGGAGTAGAG
EY930360       <-- ............TCTTCTTGGCTGGG-AGTAGATCCCAGTCGGAGTAGAG
FD949753       <-- ............TCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD971774       <-- ............TCTTCTTGGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
FD972293       <-- ............TCTTCT-GGCTGGG-AGGAGATCCCAGTCAGAGTAGAG
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> TTGGATCCTTAATCTTCT................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> TTGGATCCTTAATCTTCTTGGCTGGGGAGGAGATCCCAGTCAGAGTAGAG
FY434347       --> TTGGATCCTTAATCTTCTTGGCTGGG-AGTAGATCCCAGTC.........
EV540551       --> TTGGATCCTTAATCTTCTTGGCTGGG-AGGAGATCCCA............
FD967275       --> ..................................................
EV540915       --> ..................................................

               951    -   1001
UN17166        --> GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD556092       <-- GCTACCAGTTTGATTCTCAACGTTATCGATAAGAATACTGTAc.......
FD980198       <-- GCTACCAGTTTGCTTCTCGACGTTATCGATAAGAATACTGTAAGTAGCAT
EV536477       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD563540       <-- GCTGCCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EX889110       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATGCTGTAAGTAGCAT
FD981697       <-- GCTACCAGTTTGCTTCTCGACGTTATCGATAAGAATACTGTAAGTAGCAT
EX748011       <-- GCTGCCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EV535442       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EV537528       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EX762845       <-- GCTGCCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCGT
EY931203       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATGCTGTAAGTAGCAT
FD560809       <-- GCTGCCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD986729       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD543387       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EV548975       <-- GCTACCAGTTTGCTTCTCGACGTTATCGATAAGAATACTGTAAGTAGCAT
EY931413       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATGCTGTAAGTAGCAT
EY930360       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATGCTGTAAGTAGCAT
FD949753       <-- GCTGCCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD971774       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FD972293       <-- GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> GCTACCAGTTTGCTTCTCAACGTTATCGATAAGAATACTGTAAGTAGCAT
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1001   -   1051
UN17166        --> CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- CTGGGCGGAGGATGAACGTGTAGACGTGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- CTGGGCGGAGGATc....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- CTGGGCGGAGGATGAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
EX889110       <-- CTGGGCGGAAGATAAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
FD981697       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. maritimus
EV535442       <-- CTGGGCGGAGGATGAACGTGTAGACGTGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- CTGGGCGGAGGATGAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- CTGGGCGGAGGATAAACGTGTAGACACGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- CTGGGCGGAGGATAAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
FD560809       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
FD986729       <-- CTGGGCGGAGGATGAACGTGTAGACGTGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. landra
FD543387       <-- CTGGGCG-AGGATGAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- CTGGGCGGAGGATAAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
EY930360       <-- CTGGGCGGAGGATAAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus sativus var. oleiformis
FD949753       <-- CTGGGCGGAGGATAAACGTGTAGACATGTGTGAGCTGATCAGTCTCACAT  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- CTGGGCGGAGGATGAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- CTGGGCGGAGGATGAACGTGTAGACATGCGTGAGCTGATCAGTCTCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> CTGGGCGGAGGATGAACGTGT.............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN17166        --> GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- GGAAC.............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- GGAACCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCACTGTATGTAAGGATAGC  Raphanus sativus var. oleiformis
EX889110       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus sativus var. oleiformis
FD981697       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. maritimus
EV535442       <-- GGAACCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- GGAACCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus sativus var. oleiformis
FD560809       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTATGTAAGGATAGC  Raphanus sativus var. oleiformis
FD986729       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. landra
FD543387       <-- GGAACCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus sativus var. oleiformis
EY930360       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTAGGTAAGGATAGC  Raphanus sativus var. oleiformis
FD949753       <-- GGAACCTCCTTCTTGATCAGATGGTTTTTTCCATTGTATGTAAGGATAGC  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- GGAGCCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- GGAACCTCCTTCTTGATCAGATGGTTTGTTCCATTGTAGGTAAGGATAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN17166        --> ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCc.........
FD563540       <-- ATGCACTTTCTTGGTGTCGTAGCCACCGAATATCAGGACCGAACATGATG
EX889110       <-- ATGCACTTTCTTAGTGTCGTAGCCACAG-ATATCAGGACCGAACATGATG
FD981697       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
EX748011       <-- ATGCACTTTCTTGGTGTCGTATCCACAG-ATATCAGGACCAAACATGATG
EV535442       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
EV537528       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
EX762845       <-- ATGCACTTTCTTGGTGTCGTATCCACAG-ATATCAGGACCAAACATGATG
EY931203       <-- ATGCACTTTCTTAGTGTCGTAGCCACAG-ATATCAGGACCGAACATGATG
FD560809       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
FD986729       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCGAACATGATG
FD543387       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
EV548975       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATAAGGACCAAACATGATG
EY931413       <-- ATGCACTTTCTTAGTGTCGTAGCCACAG-ATATCAGGACCGAACATGATG
EY930360       <-- ATGCACTTTCTTAGTGTCGTAGCCACAG-ATATCAGGACCGAACATGATG
FD949753       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
FD971774       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
FD972293       <-- ATGCACTTTCTTGGTGTCGTAGCCACAG-ATATCAGGACCAAACATGATG
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1151   -   1201
UN17166        --> CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EX889110       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
FD981697       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTCCTGGTCAACATCACCACTGAG
EX748011       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EV535442       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EV537528       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTAAG
EX762845       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EY931203       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
FD560809       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
FD986729       <-- CTGTAAGGAGTGTCTCCACCGACTTTCTTCTGGTCAACATCACCACTGAG
FD543387       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTAAG
EV548975       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EY931413       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
EY930360       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTGAG
FD949753       <-- CTGTAAGGAGTGTCTCCACCAAATTTCTTCTGGTCAACATCACCACTGAG
FD971774       <-- CTGTAAGGAGTGTCTCCACCGAATTTCTTCTGGTCAACATCACCACTAAG
FD972293       <-- CTGTAAGGAGTGTCTCCACCAAATTTCTTCTGGTCAACATCACCACTAAG
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1201   -   1251
UN17166        --> AAGCTTCATGTATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
EX889110       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
FD981697       <-- AAGCTTCATGTATCCACCACCACAATCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- AAGCTTCATGTATCCTCCACCACAGTCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. maritimus
EV535442       <-- AAGCTTCATGTATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- AAGCTTCATGTATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- AAGCTTCATGTATCCTCCACCACAGTCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
FD560809       <-- AAGCTTCATGTATC-ACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
FD986729       <-- AAGCTTCATGTATCCTCCACCACAGTCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. landra
FD543387       <-- AAGCTTCATGTATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- AAGCTTCATGTATCCACCACCACAATCCAGCTTCTGCTCGTGCTTGACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
EY930360       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus var. oleiformis
FD949753       <-- AAGCTTCATGTATCCACCACCACAGTCAAGCTTCTGCTCGTGCTTGACAG  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- AAGCTTCATGTATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- AAGCTT----CATCCACCACCACAGTCCAGCTTCTGCTCGTGCTTGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN17166        --> AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
EX889110       <-- AGAACAGGAACACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
FD981697       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGGTGAAC-CAGGGAACTCA  Raphanus raphanistrum subsp. maritimus
EV535442       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
FD560809       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
FD986729       <-- AGAGCTGGAAAACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. landra
FD543387       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
EY930360       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGGTGAACTCAGGGAACTCA  Raphanus sativus var. oleiformis
FD949753       <-- AGAACTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- AGAATTGGAACACAAGGGTCTTGTCCTTGTTGCTGAACTCAGGGAACTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- .................................................A  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN17166        --> GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATc........  Raphanus sativus var. oleiformis
EX889110       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus var. oleiformis
FD981697       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGAATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. maritimus
EV535442       <-- GCGGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- GCCGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus var. oleiformis
FD560809       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus var. oleiformis
FD986729       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. landra
FD543387       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGAATACCTTTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus var. oleiformis
EY930360       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus var. oleiformis
FD949753       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- GCTGAAATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- GCTGAAATGGCGTAAAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- GCTGATATGGCGTAGAATCTGTAGTCCTCGCTAGTCTGGATACCTTTGTC  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1351   -   1401
UN17166        --> GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCCCCAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus sativus var. oleiformis
FD981697       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. maritimus
EV535442       <-- GTTAGCGTCACCAGACCAGTTCCCAGCAGTGTGGCTCCATTCTCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- GTTAGCGTCACCAGACCAGTTGCCAGCAGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus sativus var. oleiformis
FD560809       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCCCCAGCAG  Raphanus sativus var. oleiformis
FD986729       <-- GTTAGCGTCACCAGACCAGTTCCCAGCAGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. landra
FD543387       <-- GTTAGCGTCACCAGACCAGTTGCCAGCAGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus sativus var. oleiformis
EY930360       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus sativus var. oleiformis
FD949753       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATTCTCCAGCAG  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- GTTAGCGTCACCAGACCAGTTGCCAGCAGTGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- GTTAGCGTCACCAGACCAGTTGCCAGCAGCGTGGCTCCATTCCCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- GTTAGCGTCACCAGACCAGTTGCCAGCTGTGTGGCTCCATCCTCCAGCAG  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1401   -   1451
UN17166        --> TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD971042       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544343       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939517       <-- ..................................................  Raphanus sativus var. oleiformis
EV550655       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947868       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949386       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556092       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD980198       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536477       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD563540       <-- ..................................................  Raphanus sativus var. oleiformis
EX889110       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCc  Raphanus sativus var. oleiformis
FD981697       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748011       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus raphanistrum subsp. maritimus
EV535442       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTTACCCATCTCTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537528       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTTACCCATCTCTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762845       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931203       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus var. oleiformis
FD560809       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus var. oleiformis
FD986729       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus raphanistrum subsp. landra
FD543387       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTTACCCATCTCTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548975       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931413       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus var. oleiformis
EY930360       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus var. oleiformis
FD949753       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus cv Early Scarlet Globe
FD971774       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTTACCCATCTCTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972293       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTTACCCATCTCTTCTCCCATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894245       <-- TGTTGTCATCTTTCTTCCAGTCAGATTTCACCCATCTGTTCTCCCATCCA  Raphanus sativus cv Early Scarlet Globe
FD581329       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD552454       --> ..................................................  Raphanus raphanistrum subsp. landra
EV544549       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565141       --> ..................................................  Raphanus sativus var. oleiformis
EV540122       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539228       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752071       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945359       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439947       --> ..................................................  Raphanus sativus cv GSK3-1
EX892907       --> ..................................................  Raphanus sativus var. oleiformis
FD967811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968203       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541734       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434347       --> ..................................................  Raphanus sativus cv GSK3-1
EV540551       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967275       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540915       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1451   -   1501
UN17166        --> TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- TCacc.............................................
EX748011       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
EV535442       <-- TCGTCGAATTTCTCCTCGAAGATAATGCTAGCAGATGCGATCGCGACGAG
EV537528       <-- TCGTCGAATTTCTCCTCGAAGATAACACTAGCAGATGCGATCGCGACGAG
EX762845       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
EY931203       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
FD560809       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGAAGCGATCGCGAGGAG
FD986729       <-- TCATCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACAAG
FD543387       <-- TCGTCGAATTTCTCCTCGAAGATAACACTAGCAGATGCGATCGCGACGAG
EV548975       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGAAGAG
EY931413       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
EY930360       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
FD949753       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGATGCGATCGCGACGAG
FD971774       <-- TCGTCGAATTTCTCCTCGAAGATAACACTAGCAGATGCGATCGCGACGAG
FD972293       <-- TCGTCGAATTTCTCCTCGAAGATAACACTAGCAGATGCGATCGCGACGAG
EX894245       <-- TCGTCGAATTTCTCCTCGAAGATAACGCTAGCAGAT..............
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1501   -   1551
UN17166        --> GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
EV535442       <-- GCCGATAAGAATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
EV537528       <-- GCCGATAAGGATCAGAGAGATGAAGCTAGGGTTTAGTTTCGCCATCGCTA
EX762845       <-- GACGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
EY931203       <-- GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
FD560809       <-- GCCGATAAGAATCAGAGAGATGAAGTTAGGGTTTAGTTTCACCAT-GCTA
FD986729       <-- GCCGATAAGAATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
FD543387       <-- GCCGATAAGGATCAGAGAGATGAAGCTAGGGTTTAGTTTCGCCATCGCTA
EV548975       <-- CCCGATAAGAATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
EY931413       <-- GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
EY930360       <-- GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
FD949753       <-- GCCGATAAGGATCAGAGAGATGAAGTTAGGGTTTAGTTTCGCCATCGCTA
FD971774       <-- GCCGATAAGGATCAGAGAGATGAAGCTAGGGTTTAGTTTCGCCATCGCTA
FD972293       <-- GCCGATAAGGATCAGAGAGATGAAGCTAGGGTTTAGTTTCGCCATCGCTA
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1551   -   1601
UN17166        --> GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATGCTACAAAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576929       <-- ..................................................
FD971042       <-- ..................................................
FD544343       <-- ..................................................
FD939517       <-- ..................................................
EV550655       <-- ..................................................
FD947868       <-- ..................................................
FD949386       <-- ..................................................
EV536011       <-- ..................................................
FD556092       <-- ..................................................
FD980198       <-- ..................................................
EV536477       <-- ..................................................
FD563540       <-- ..................................................
EX889110       <-- ..................................................
FD981697       <-- ..................................................
EX748011       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATcc...........
EV535442       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATcc...........
EV537528       <-- GAAACTCAGATCGCACCTTCTTCGAAAACAGTAAGATcc...........
EX762845       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATGCcc.........
EY931203       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATGCTACcc......
FD560809       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAagatcc..........
FD986729       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAagatccc.........
FD543387       <-- GAAACTCAGATCGCACCTTCTTCGAAAACAGTAAGATcc...........
EV548975       <-- GAAACTCAGATCGTACCTTCCTCGAAAACAGTAAGATGCTACAAAAGCCT
EY931413       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATGCTcc........
EY930360       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATGCTcc........
FD949753       <-- GAAACTCAGATCGCACCTTCCTCGAAAACAGTAAGATcc...........
FD971774       <-- GAAACTCAGATCGCACCTTCTTCGAAAACAGTAAGATc............
FD972293       <-- GAAACTCAGATCGCACCTTCTTCGAAAACAGTAAGATccccggccgtaat
EX894245       <-- ..................................................
FD581329       --> ..................................................
FD552454       --> ..................................................
EV544549       --> ..................................................
FD976126       --> ..................................................
FD565141       --> ..................................................
EV540122       --> ..................................................
FD539228       --> ..................................................
EX752071       --> ..................................................
FD945359       --> ..................................................
FY439947       --> ..................................................
EX892907       --> ..................................................
FD967811       --> ..................................................
FD968203       --> ..................................................
EV541734       --> ..................................................
FY434347       --> ..................................................
EV540551       --> ..................................................
FD967275       --> ..................................................
EV540915       --> ..................................................

               1601   -   1651
UN17166        --> ATAAGAAGATCC
                   ~~~~~~~~~~~~
FD576929       <-- ............
FD971042       <-- ............
FD544343       <-- ............
FD939517       <-- ............
EV550655       <-- ............
FD947868       <-- ............
FD949386       <-- ............
EV536011       <-- ............
FD556092       <-- ............
FD980198       <-- ............
EV536477       <-- ............
FD563540       <-- ............
EX889110       <-- ............
FD981697       <-- ............
EX748011       <-- ............
EV535442       <-- ............
EV537528       <-- ............
EX762845       <-- ............
EY931203       <-- ............
FD560809       <-- ............
FD986729       <-- ............
FD543387       <-- ............
EV548975       <-- ATAAGAAGATCC
EY931413       <-- ............
EY930360       <-- ............
FD949753       <-- ............
FD971774       <-- ............
FD972293       <-- ggcgcactcc..
EX894245       <-- ............
FD581329       --> ............
FD552454       --> ............
EV544549       --> ............
FD976126       --> ............
FD565141       --> ............
EV540122       --> ............
FD539228       --> ............
EX752071       --> ............
FD945359       --> ............
FY439947       --> ............
EX892907       --> ............
FD967811       --> ............
FD968203       --> ............
EV541734       --> ............
FY434347       --> ............
EV540551       --> ............
FD967275       --> ............
EV540915       --> ............