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Alignment for radish unigene UN17188

               -15    -     35
UN17188        --> ................AAGGTTGAGAACATTATTTATCTGTTCACAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- agatgttttatcatatAAGGTTGAGAACATTATTTATCTGTTCACAAAGA
FD551271       <-- ..................................................
FD978855       <-- ..................................................
FD566385       --> agatgttttatcatatAAGGTTGAGAACATTATTTATCTGTTCACAAAGA
FD943226       --> ...........catatAAGGTTGAGAACATTATTTATCTGTTCACAAAGA
FD975021       --> ..............ctAAGGTTGAGAACATTATTTATCTCTTCACAAAGA

               35     -     85
UN17188        --> AAGCAAAACACAAATGAACAATGGGGAGATA---CTAAACAAAATACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- AAGCAAAACACAAATGAACAATGGGGAGATA---CTAAACAAAATACATA
FD551271       <-- ..................................................
FD978855       <-- ..................................................
FD566385       --> AAGCAAAACACAAATGAACAATGGGGAGATA---CTAAACAAAATACATA
FD943226       --> AAGCAAAACACAAATGAACAATGGGGAGATA---CTAAACAAAATACATA
FD975021       --> AAGCAAAACACAAATGA-CAATGTGGAGATATTACTAAACAAAATGCATA

               85     -    135
UN17188        --> AAAGCGGTCCATTTTGGTTGGTTGGTGAATGGTGGTGATAAGAGCAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- AAAGCGGTCCATTTTGGTTGGTTGGTGAATGGTGGTGATAAGAGCAATTT
FD551271       <-- ..................................................
FD978855       <-- ..................................................
FD566385       --> AAAGCGGTCCATTTTGGTTGGTTGGTGAATGGTGGTGATAAGAGCAATTT
FD943226       --> AAAGCGGTCCATTTTGGTTGGTTGGTGAATGGTGGTGATAAGAGCAATTT
FD975021       --> AAAGCGGTCCATTTTGTTTGGTTGGTGAATGGTAGTGATAAGAGCGATTT

               135    -    185
UN17188        --> GAAAAACAGAGGGAGGAAAGTTAATCCACCCACACTCAAAAGTGTGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- GAAAAACAGAGGGAGGAAAGTTAATCCACCCACACTCAAAAGTGTGATAT
FD551271       <-- ..................................................
FD978855       <-- ..................................................
FD566385       --> GAAAAACAGAGGGAGGAAAGTTAATCCACCCACACTCAAAAGTGTGATAT
FD943226       --> GAAAAACAGAGGGAGGAAAGTTA-TCCACCCACACTCAAAAGTGTGATAT
FD975021       --> GAAAAACAGAGGGAGGTAAGTTAATCCACCCACACTCAAAAGTGTGATAT

               185    -    235
UN17188        --> C--AATCAATTGATCCGACGACAGATAGTGATCCCATCACCAACGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- C--AATCAATTGATCCGACGACAGATAGTGATCCCATCACCAACGGGAAG
FD551271       <-- ..................................................
FD978855       <-- ..................................................
FD566385       --> C--AATCAATTGATCCGACGACAGATAGTGATCCCATCACCAACGGGAAG
FD943226       --> CTCAATCAATTGATCCGACGACAGATAGTGATCCCATCACCAACGGGAAG
FD975021       --> C--AATCAATTGACCCGACGACAGATAGTGATTCCATCACCAACAGGGAG

               235    -    285
UN17188        --> CATGCAAATCTCGATCCTAGGGTCAGCAGCGAGAGCCTTGTTAAGCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- CATGCAAATCTCGATCCTAGGGTCAGCAGCGAGAGCCTTGTTAAGCTCAA
FD551271       <-- ......................................ttTTAAGCTCAA
FD978855       <-- ..................................................
FD566385       --> CATGCAAATCTCGATCCTAGGGTCAGCAGCGAGAGCCTTGTTAAGCTCAA
FD943226       --> CATGCAAATCTCGATCCTAGGGTCAGCAGCGAGAGCCTTGTTAAGCTCAA
FD975021       --> CATGCAAATCTCGATCCTAGGGTCAGCTGCGAGAGCCTTATTAAGCTCAA

               285    -    335
UN17188        --> GAACAAAGTCTCTGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- GAACAAAGTCTCGGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGA
FD551271       <-- GAACAAAGTCTCTGTAGTA-CGAACGTACT-CCTCATCG-TGCATCAGGA
FD978855       <-- ...............AGTAACGAACGTACTTCCTCATCGGTGCATCAGGA
FD566385       --> GAACAAAGTCTCGGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGA
FD943226       --> GAACAAAGTCTCTGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGA
FD975021       --> GAACAAAGTCTCTGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGA

               335    -    385
UN17188        --> GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATCACTCC
FD551271       <-- GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCC
FD978855       <-- GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCC
FD566385       --> GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATCACTCC
FD943226       --> GGAGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCC
FD975021       --> GGGGCCACAACGGAGCCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCC

               385    -    435
UN17188        --> TCCAACTTTTACAAGATCGATCAAACGTTTATGGTAGTTGATGTAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- TCCAACTTTCACAAGATCAATCAAACGTTTATGGTAGTTGATGTAGTTGT  Raphanus sativus var. oleiformis
FD551271       <-- TCCAACTTTTACAAGATCGACCAAACGTTTATGGTAGTTGATGTAGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978855       <-- TCCAACTTTTACAAGATCGATCAAACGCTTATGGTAGTTGATGTAGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566385       --> TCCAACTTTCACAAGATCAATCAAACGTTTATGGTAGTTGATGTAGTTGT  Raphanus sativus var. oleiformis
FD943226       --> TCCTACTTTCACAAGATCGATCAAACGTTTATGGTAGTTGATGTAGTTGT  Raphanus sativus cv Early Scarlet Globe
FD975021       --> TCCAACTTTTACAAGATCGATCAAACGCTTATGGTAGTTGATGTAGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               435    -    485
UN17188        --> CTTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- CTTTGTCAGCATCGACGAATATAAAGTCATATGTTCCATGGTTCTTCTCG
FD551271       <-- CTTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCG
FD978855       <-- CTTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCG
FD566385       --> CTTTGTCAGCATCGACGAATATAAAGTCATATGTTCCATGGTTCTTCTCG
FD943226       --> CTTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCG
FD975021       --> CTTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCG

               485    -    535
UN17188        --> TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
FD551271       <-- TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
FD978855       <-- TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
FD566385       --> TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
FD943226       --> TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC
FD975021       --> TCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGCCTTCCCTGAAGTC

               535    -    585
UN17188        --> GATCTTGTGAGATACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- GATCTTGTGAGCAACGCCAGCTTCCTCGATGATCGGTAGACCCAACTCGT  Raphanus sativus var. oleiformis
FD551271       <-- GATCTTGTGAGATACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978855       <-- GATCTTGTGAGATACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566385       --> GATCTTGTGAGCAACGCCAGCTTCCTCGATGATCGGTAGACCCAACTCGT  Raphanus sativus var. oleiformis
FD943226       --> GATCTTGTGAGCTACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGT  Raphanus sativus cv Early Scarlet Globe
FD975021       --> GATCTTGTGAGATACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               585    -    635
UN17188        --> AGTTCTCTCTGTTAACGTCCATAGCTAGAATTTTGCCGTCTTCAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- AGTTCTCTCTGTTAACATCCATc...........................
FD551271       <-- AGTTCTCTCTGTTAACGTCCATAGCTAGAATTTTGCCGTCTTCAGGGAGA
FD978855       <-- AGTTCTCTCTGTTAACGTCCATAGCTAGAATTTTGCCGTCTTCAGGGAGA
FD566385       --> AGTTCTCTCTGTTAACATCCATc...........................
FD943226       --> AGCTCTCTCTGTTAACGTCCATAGCTAGAATTTTGCCGTCTTCAGGGAGA
FD975021       --> AGTTCTCTCTGTTAACGTCCATAGCTAGAATTTTGCCGTCTTCAGGGAGA

               635    -    685
UN17188        --> GCAAGAGCGGTGGCGAGGAGAGAGTAGCCAGTGTAAACGCCGATCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- GCAAGAACGGTGGCGGGGAGAGAGTAGCCAGTGTAAAC-CCGATCTCCAT
FD978855       <-- GCAAGAGCGGTGGCGAGGAGAGAGTAGCCAGTGTAAACGCCGATCTCCAT
FD566385       --> ..................................................
FD943226       --> GCAAGAGCGGTGGCGAGGAGAGAGTAGCCAGTGTAAACGCCGATCTCCAT
FD975021       --> GCAAGAGCGGTGGCGAGGAGAGAGTAGCCAGTGTAAACGCCGATCTCCAT

               685    -    735
UN17188        --> AGTGTTCTTGGCGTTAACAAGCTTGATGAGCATGTTGAGAAACTGACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- AGTGTTCTTGGCGTTAACAAGCTTGATGAGCATGTTGAGAAACTGACCTT
FD978855       <-- AGTGTTCTTGGCGTTAACAAGCTTGATGAGCATGTCGAGAAACTGACCTT
FD566385       --> ..................................................
FD943226       --> AGTGTTCTTGGCGTTAACAAGCTTGATGAGCATGTTGAGAAACTGACCTT
FD975021       --> AGTGTTCTTGGCGTTAACAAGCTTGATGAGCATGTCGAGAAACTGACCTT

               735    -    785
UN17188        --> CATCTGCTGATGTTGTCATTATGTTCCAAGGGTGTTTTGCTGTGACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- CATCTGCTGATGTTGTCATTATGTTCCAAGGGTGTTTTGCTGTGACTTCC
FD978855       <-- CATCTGCTGATGTTGTCATTATGTTCCAAGGGTGTTTTGCTGTGACTTCC
FD566385       --> ..................................................
FD943226       --> CATCTGCTGATGTTG...................................
FD975021       --> CATCTGCTGATGTTGTCATTATGTT.........................

               785    -    835
UN17188        --> CTAAGTTCTTTCGTTGATTCTGGTTCTCTTGGATACACACTTGTCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- CTAAGTTCTTTCGTTGATTCTGGTTCTCTTGGATACACACTTGTCTCCAG
FD978855       <-- CTAAGTTCTTTCATTGATTCTGGTTCTCTTGGATACACACTTGTCTCCAG
FD566385       --> ..................................................
FD943226       --> ..................................................
FD975021       --> ..................................................

               835    -    885
UN17188        --> AATATACTGGTAGAGTTCGTCGCTCTGTAAGAGACTCTTGTGACCGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- AATATACTGGTAGAGTTCGTCGCTCTGTAAGAGACTCTTGTGACCGACTT
FD978855       <-- AATATACTGGTAGAGTTCGTCGCTCTGTAAGAGACTCTTGTGACCGACTT
FD566385       --> ..................................................
FD943226       --> ..................................................
FD975021       --> ..................................................

               885    -    935
UN17188        --> CTTGGTGTCGGAGATTCTGAGATTGCTTGTCTTCTCCATTTGTAGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- CTTGGTGTCGGAGATTCTGAGATTGCTTGTCTTCTCCATTTGTAGGAGAT
FD978855       <-- CTTGGTGTCGGAGATTCTGAGATTGCTTGTCTTCTCCATTTGTAGGAGAT
FD566385       --> ..................................................
FD943226       --> ..................................................
FD975021       --> ..................................................

               935    -    985
UN17188        --> GTCTTCGTTGTCTCTGCTGTTGTCGTCGCCATCTCTCTCTCTGTATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- GTCTTCGTTGTCTCTGCTGTTGTCGTCGCCATCTCTCTCTCTGTATATGT
FD978855       <-- GTCTTCGTTGTCTCTGCTGTTGTCGTCGCCATCTCTCTCTCTGTATATGT
FD566385       --> ..................................................
FD943226       --> ..................................................
FD975021       --> ..................................................

               985    -   1035
UN17188        --> TTTTTTTTTTTGAACAACTCTCTCTGTATACCTTAAAGTGTTTTTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD562494       <-- ..................................................
FD551271       <-- TTTTTTTTTTTGAACAACTCTCTCTGTATACCTTAAAGTGTTTTTGGGTC
FD978855       <-- TTTTTTTTTT-GAACAACTCTCTCTGTATACCTTAAAGTGTTTTTGGGTC
FD566385       --> ..................................................
FD943226       --> ..................................................
FD975021       --> ..................................................

               1035   -   1085
UN17188        --> C
                   ~
FD562494       <-- .
FD551271       <-- C
FD978855       <-- C
FD566385       --> .
FD943226       --> .
FD975021       --> .