RadishBase

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Alignment for radish unigene UN17197

               1      -     51
UN17197        --> GAACCCTATGAAACGAGTACACTGATAAATAACCAAACCCATAAGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..........................AAATAACCAAACCCATAAGTTATC
EV548651       <-- ...................................AACCCATAAGTTATA
EX890402       <-- ..................................................
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> GAACCCTATGAAACGAGTACACTGATAAATAACCAAACCCATAAGTTATC
FD942141       --> .......................GATAAATAAACAAACCCATAAGTTATC
EX893924       --> ..........................................AAGTTATC
FY441206       --> ..................................................

               51     -    101
UN17197        --> AGAAGTTTCTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- AGAAGTCTCTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA
EV548651       <-- AGAAGTT-CTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA
EX890402       <-- ..................................................
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> AGAAGTTTCTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA
FD942141       --> AGAAGTTTCTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAA-GCA
EX893924       --> AGTAGTTTCTGAAAACAAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA
FY441206       --> ..........ctgaaacAATTTAGAGGTTATTAAGTGCTCCCAAAAAGCA

               101    -    151
UN17197        --> CATGAACAAGTCTT--GCCACAAGAAAAAAAAA-GGTTTAGAAAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- CATGAACAAGTCTT--GCCACAAGAAAAAAAAAAGGTTTAGAAAAGAAAA
EV548651       <-- CATGAACAAGTCTTTTGCCACAAGAAAAAAAAA-GGTTTAGAAAACAAAA
EX890402       <-- ..................................................
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> CATGAACAAGTCTTTTGCCACAAGAAAAAAAA--GGTTTAAAAAACAAAA
FD942141       --> CATGAACAAGTCTT--GCCACAAGAAAAAAAA--GGTTTAGAAAAGAAAA
EX893924       --> CATGAACAAGTCTT--GCCACAAGAAAAAAAAA-GGTTTAAAAAAGAAAA
FY441206       --> CATGAACAAGTCTT--GCCACAAGAAAAAAAAAAGGTTTAGAAAAGAAAA

               151    -    201
UN17197        --> GCATGGGCAT--TCATTATGTTATGCAATTCTCCCCC---AAAAGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- GCATGGGCAT---CATTATGTTATGCAATTCTCCCCCCCCAAAAGAAAAA
EV548651       <-- GCACGGGCAT-ATCATTATGTTATGCAATTCTCCCCC---AAAAGAAAAA
EX890402       <-- ..................................................
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> GCATGG-CAT-ATCATTATGTTATGCAATTCTCCCCC---AAAAGAAAAA
FD942141       --> GCATGGGAATCATCATTATGTTATGCAATTCTCCCCC---AAAACAAAAA
EX893924       --> GCATGGGCATCATCATTATGTTATGCAATTCTCCCCC---AAAACAAAAA
FY441206       --> GCATGGGCAT---CATTATGTTATGCAATTCTCCCCCCCCAAAAGAAAAA

               201    -    251
UN17197        --> -GAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- -GAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT
EV548651       <-- AGAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT
EX890402       <-- ..................................................
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> AGAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT
FD942141       --> -GAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT
EX893924       --> -GAAAAGCTGTTATCACTTCCTTAAAAAAGCAACAGTTGCCACACGCGAT
FY441206       --> -GAAAAGCTGTTATCACTTCCTTAGAAAAGCAACAGTTGCCACACGCGAT

               251    -    301
UN17197        --> CCCACAGACCCACCAAACATGAACGTTGGGTACGTCCTAACGTGGCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- CCCACAGACCCACCAAACATGAACGTTGGGTACGTCCTAACGTGGCTCAG
EV548651       <-- CCCACAGACCCACCAAACATGAACGTTGGGTACGTCCTAACGTGGCTCAG
EX890402       <-- ..............................................TCAG
FY434786       <-- ..................................................
FY438367       <-- ..................................................
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> CCCACAGACCCACCAAACATGAACGTCGGGTACGTCCTAACGTGGCTCAA
FD942141       --> CCCACAGACCCACCAAACATGAACGTCGGGTACGTCCTAACGTGGCTCAG
EX893924       --> CCCACAGACCCACCAAACATGAACGTTGGGTACGTCCTAACGTGGCTCAG
FY441206       --> CCCACAGACCCACCAAACATGAACGTTGGGTACGTCCTAACGTGGCTCAG

               301    -    351
UN17197        --> ATACTCAAACGGAGGATGATCGGTTCCACTTGCAGCTTCGGAAGACACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ATACTCAAACGGAGGATGATCAGTTCCACTTGCAGCTTCGGAAGACACAT  Raphanus sativus cv GSK3-1
EV548651       <-- ATACTCAAACGGAGGATGATCAGTTCCACTTGCAGCTTCGGAAGACACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890402       <-- ATACTCAAACGGAGGATGATCGGTTCCACTTGCAGCTTCGGAAGAAACAT  Raphanus sativus var. oleiformis
FY434786       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438367       <-- ..................................................  Raphanus sativus cv GSK3-1
FY436081       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451268       <-- ..................................................  Raphanus sativus cv GSK3-1
FY434441       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446052       <-- ..................................................  Raphanus sativus cv GSK3-1
EX746646       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD945933       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY439351       <-- ..................................................  Raphanus sativus cv GSK3-1
FY439424       <-- ..................................................  Raphanus sativus cv GSK3-1
EX751002       --> ATACTCAAACGGAGGATGATCGGTTCCACTTGCAGCTTCGGAAGACAAAT  Raphanus raphanistrum subsp. maritimus
FD942141       --> ATACTCAAACGGAGGATGATCGGTTCCACTTGCAGCTTCGGAAGACGCAT  Raphanus sativus cv Early Scarlet Globe
EX893924       --> ATACTCAAACGGAGGATGATCGGTTCCACTTGCAGCTTCGGAAGAAACAT  Raphanus sativus var. oleiformis
FY441206       --> ATACTCAAACGGAGGATGATCAGTTCCACTTGCAGCTTCGGAAGACACAT  Raphanus sativus cv GSK3-1

               351    -    401
UN17197        --> CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
EV548651       <-- CTCCACTTAAATTCGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
EX890402       <-- CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
FY434786       <-- ..............................AATTCTCCACTTCTTCCAAG
FY438367       <-- ...............................................AAG
FY436081       <-- ..................................................
FY451268       <-- ..................................................
FY434441       <-- ..................................................
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
FD942141       --> CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
EX893924       --> CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG
FY441206       --> CTCCAGTTAAATTTGATTTTCTCATGTTGAAATTCTCCACTTCTTCCAAG

               401    -    451
UN17197        --> AGTTCGTCCTTTGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- AGTTCGTCCTTTGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG
EV548651       <-- AGTTCGTCCTTTGTGTTATTACACGACGTGATAACCAGTATACCACCAGG
EX890402       <-- AGTTCGTCCTTTGTGTTGTTACATGACGTAATAACCAGTATACCACCAGG
FY434786       <-- AGTTCGTCCTTTGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG
FY438367       <-- AGTTCGTCCTTTGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG
FY436081       <-- ...TCGTCCTTTGTGTTGTTACACGACGTGATACCCAGTATACCACCAGG
FY451268       <-- .....GTCCTTTGTGTTGTTACACGACGTGATACCCAGTATACCACCAGG
FY434441       <-- ...............TTGTTACACGACGTGATAACCAGTATACCACCAGG
FY446052       <-- ..................................................
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> AGTTCGTCCTTCGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG
FD942141       --> AGTTCGTCCTTTGTGTTGTTGCACGACGTGATAACCAGTATACCACCAGG
EX893924       --> AGTTCGTCCTTTGTGTTGTTACATGACGTAATAACCAGTATACCACCAGG
FY441206       --> AGTTCGTCCTTTGTGTTGTTACACGACGTGATAACCAGTATACCACCAGG

               451    -    501
UN17197        --> AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
EV548651       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
EX890402       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATAACTCTTTTGACAGGGC
FY434786       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FY438367       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FY436081       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FY451268       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FY434441       <-- AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FY446052       <-- ..........................................GACAGGGC
EX746646       <-- ..................................................
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
FD942141       --> AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC
EX893924       --> AGCAACCAGCTTGGACACTGAATCCCAATACATAACTCTTTTGACAGGGC
FY441206       --> AGCAACCAGCTTGGACACTGAATCCCAATACATGACTCTTTTGACAGGGC

               501    -    551
UN17197        --> CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
EV548651       <-- CATCAGGATGCAAACCAATGGCATCCAGAGTTCCTTTGTCCATCACCAGC
EX890402       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY434786       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY438367       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY436081       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY451268       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY434441       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY446052       <-- CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
EX746646       <-- .....................CATCCAAAGT-CCTTTGTCCATCACCAGC
FD945933       <-- ..................................................
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> CATCAGGACGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FD942141       --> CATCAGGATGCAAACCAATGGCATCCAGAGTTCCTTTGTCCATCACCAGC
EX893924       --> CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC
FY441206       --> CATCAGGATGCAAACCAATGGCATCCAAAGTTCCTTTGTCCATCACCAGC

               551    -    601
UN17197        --> TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
EV548651       <-- TTGAACTGCCTTTTCAATTTTGTATCAAGGATATCATCAACCATGAAACG
EX890402       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY434786       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY438367       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY436081       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY451268       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY434441       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY446052       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAATG
EX746646       <-- TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FD945933       <-- .................aTTTGTATCAAGGATATCATCAACCATGAAACG
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FD942141       --> TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
EX893924       --> TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG
FY441206       --> TTGAACTGCCTTTCCAATTTTGTATCAAGGATATCATCAACCATGAAACG

               601    -    651
UN17197        --> TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
EV548651       <-- TATATTTGGGAAACCATCACGTTGGGAGAGATGTTGAGCGAGTTCAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890402       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGCGAGTTCAACCG  Raphanus sativus var. oleiformis
FY434786       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
FY438367       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
FY436081       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
FY451268       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
FY434441       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
FY446052       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1
EX746646       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGTGAGTTCAACCG  Raphanus raphanistrum subsp. maritimus
FD945933       <-- TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGCGAGTTCAACCG  Raphanus sativus cv Early Scarlet Globe
FY439351       <-- ..................................................  Raphanus sativus cv GSK3-1
FY439424       <-- ..................................................  Raphanus sativus cv GSK3-1
EX751002       --> TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGTGAGTTCAACCG  Raphanus raphanistrum subsp. maritimus
FD942141       --> TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGCGAGTTCAACCG  Raphanus sativus cv Early Scarlet Globe
EX893924       --> TATATTTGGGAACCCATCACGTTGGGAGAGATGTTGAGCGAGTTCAACCG  Raphanus sativus var. oleiformis
FY441206       --> TATATTTGGGAACCCATCACGTTGGGAGAGATTTTGAGCGAGTTCAACCG  Raphanus sativus cv GSK3-1

               651    -    701
UN17197        --> CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
EV548651       <-- CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAAACCCTCCTTAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890402       <-- CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus var. oleiformis
FY434786       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
FY438367       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
FY436081       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
FY451268       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
FY434441       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
FY446052       <-- CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1
EX746646       <-- CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus raphanistrum subsp. maritimus
FD945933       <-- CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCC  Raphanus sativus cv Early Scarlet Globe
FY439351       <-- ..................................................  Raphanus sativus cv GSK3-1
FY439424       <-- ..................................................  Raphanus sativus cv GSK3-1
EX751002       --> CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus raphanistrum subsp. maritimus
FD942141       --> CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCC  Raphanus sativus cv Early Scarlet Globe
EX893924       --> CTCCTTCACTATAATCAGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus var. oleiformis
FY441206       --> CTCCTTCACTATAATCTGTCCCGGTTAAATCAGAGAACCCCTCCTTAGCA  Raphanus sativus cv GSK3-1

               701    -    751
UN17197        --> AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
EV548651       <-- AGCTGATGAAGGAGTAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
EX890402       <-- AGCTGATGAAGAAGTAAGCCATTTCCAGTACCAAGGTCAAGCACATTCCA
FY434786       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FY438367       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FY436081       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FY451268       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FY434441       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FY446052       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
EX746646       <-- AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FD945933       <-- AGCTGATGAAGAAGCAATCCATTTCCGGTACCAAGGTCAAGTACATTCCA
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA
FD942141       --> AGCTGA............................................
EX893924       --> AGCTGATGAAGAAGTAAGCCATTTCCAGTACCAAGGTCAAGCACATTCCA
FY441206       --> AGCTGATGAAGAAGCAAGCCATTTCCGGTACCAAGGTCAAGCACATTCCA

               751    -    801
UN17197        --> GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTgtc......  Raphanus sativus cv GSK3-1
EV548651       <-- GCTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCc..........  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890402       <-- GCTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus var. oleiformis
FY434786       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
FY438367       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
FY436081       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
FY451268       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
FY434441       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
FY446052       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1
EX746646       <-- GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus raphanistrum subsp. maritimus
FD945933       <-- GCTAGACAAATACTTGTCAGCCTGATCATTCGCCTCACCGTTGTCAGAAA  Raphanus sativus cv Early Scarlet Globe
FY439351       <-- ..................................................  Raphanus sativus cv GSK3-1
FY439424       <-- ..................................................  Raphanus sativus cv GSK3-1
EX751002       --> GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus raphanistrum subsp. maritimus
FD942141       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX893924       --> GCTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus var. oleiformis
FY441206       --> GGTAGACAAATACTTGTCAGCCTGATCATTCACCTCACCGTTGTCAGAAA  Raphanus sativus cv GSK3-1

               801    -    851
UN17197        --> CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- CAGACATCTCCTTCTGAGAAATCTCAACGCACAAGTCTTTCGTACAAGAG
FY434786       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY438367       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY436081       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY451268       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY434441       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY446052       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
EX746646       <-- CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FD945933       <-- CAGACATCTCCTTCTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG
FY439351       <-- ..................................................
FY439424       <-- ..................................................
EX751002       --> CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCC.....
FD942141       --> ..................................................
EX893924       --> CAGACATCTCCTTCTGAGAAATCTCAACGCACAAGTCTTTCGTACAAGAG
FY441206       --> CAGACATCTCCTTTTGAGAAATCTCAACGCACAAGTCTTTCGTCCAAGAG

               851    -    901
UN17197        --> GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY434786       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY438367       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY436081       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY451268       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY434441       <-- GTAACAATTTCCATGACATAATCTCCAAACCAAACTTCGCCAGTATGGCC
FY446052       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
EX746646       <-- GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FD945933       <-- GTAACAATTTCCATCACATCATCACCAAACCAAACTTCGCCGGTATGGCC
FY439351       <-- ...ACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
FY439424       <-- ...ACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> GTAA..............................................
FY441206       --> GTAACAATTTCCATGACATCATCTCCAAACCAAACTTCGCCAGTATGGCC

               901    -    951
UN17197        --> ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY434786       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY438367       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY436081       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY451268       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY434441       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY446052       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
EX746646       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FD945933       <-- ATGCTCCCTGAAGTTAGTGAGCTCATCAGAGTAAGCAGCGTCCCAATAGC
FY439351       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
FY439424       <-- ATGCTCCCTGAAATTAGAGAGCTCATCAGAGTAAGCTGCATCCCAATAGC
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ATGCTCCC..........................................

               951    -   1001
UN17197        --> TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCAGCATCTGGCTCTTCCTTA
FY434786       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY438367       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY436081       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY451268       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY434441       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY446052       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
EX746646       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FD945933       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY439351       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
FY439424       <-- TTTGGAGACCAAGCATTGACTGTCCTCCATCTGCATCTGGCTCTTCCTTA
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1001   -   1051
UN17197        --> TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- TCagc.............................................
FY434786       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY438367       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY436081       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY451268       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY434441       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY446052       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
EX746646       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FD945933       <-- TCCGAACCGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY439351       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
FY439424       <-- TCCGAACTGTAATCTGAAGAGACGCGAAAGTTGGCGGAGGAGAGAGCCTC
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1051   -   1101
UN17197        --> GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- ..................................................
FY434786       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY438367       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY436081       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY451268       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY434441       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY446052       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
EX746646       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FD945933       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY439351       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
FY439424       <-- GGCGGCGTCGGCGTGGCGCTGATCGTCGTCGAGAGTGCTTCCGTACTCGC
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1101   -   1151
UN17197        --> TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- ..................................................
FY434786       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY438367       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY436081       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY451268       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY434441       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY446052       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
EX746646       <-- TCTTGATCGAACACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FD945933       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGATCGTCGTCGGAAGCC
FY439351       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
FY439424       <-- TCTTGATCGACCACGAATCCGCCGCAATAGATCGGTCGTCGTCGGAAGCC
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1151   -   1201
UN17197        --> AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- ..................................................
FY434786       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY438367       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY436081       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY451268       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY434441       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY446052       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
EX746646       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FD945933       <-- AAGCTGTCCGTCGCCGTCGCTCTGGCCTGTTGCTGAGGAGTTGTCTCTGG
FY439351       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
FY439424       <-- AAGCTATCCGTCGCCGTCGCCCTGGCCTGTTGCTGAGGAGTTGTCTCAGG
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1201   -   1251
UN17197        --> TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ..................................................
EV548651       <-- ..................................................
EX890402       <-- ..................................................
FY434786       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGAT-CAACGCCCAGG...
FY438367       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGA..
FY436081       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGA..
FY451268       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGAT-CAACGC........
FY434441       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGA..
FY446052       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGAT-CAACGC........
EX746646       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGATA
FD945933       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGATTCAACGCCCAGGATA
FY439351       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGA................
FY439424       <-- TTCTTCCGGTGCTAATCTGATTCCCGCCATGAGA................
EX751002       --> ..................................................
FD942141       --> ..................................................
EX893924       --> ..................................................
FY441206       --> ..................................................

               1251   -   1301
UN17197        --> GGTACGGTTTGCTTTTTTGACTCGGTTTGATAAAAGAGACGATGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY429226       <-- ...............................................
EV548651       <-- ...............................................
EX890402       <-- ...............................................
FY434786       <-- ...............................................
FY438367       <-- ...............................................
FY436081       <-- ...............................................
FY451268       <-- ...............................................
FY434441       <-- ...............................................
FY446052       <-- ...............................................
EX746646       <-- GGTACGGTTTGCTTTTTTGACTCGGTTTGATAAAAGAGACGATGCCC
FD945933       <-- GGTACcc........................................
FY439351       <-- ...............................................
FY439424       <-- ...............................................
EX751002       --> ...............................................
FD942141       --> ...............................................
EX893924       --> ...............................................
FY441206       --> ...............................................