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Alignment for radish unigene UN17204

               1      -     51
UN17204        --> GGGAATCTGAGAAAATCAAACCGATTCCAATTCATCGAGAAATGGACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- .........................TCCAATTCATCGAGAAATGGACCGG
EW719225       <-- ..................................................
FD975875       <-- ..................................................
FD958533       <-- ..................................................
FD958602       <-- ..................................................
FD976416       <-- ..................................................
EX776610       <-- ..................................................
EW723261       --> GGGAATCTGAGAAAATCAAACCGATTCCAATTCATCGAGAAATGGACCGG
EY916263       --> ..ggATCTGAGAAAATCAAACCGATTCCAATTCATCGAGAAATGGACCGG
EW715221       --> ...............ggAAACCGATTCCAATTCATCGAGAAATGGACCGG
EV524650       --> ...............................ggATCGAGAAATGGACCGG
FD961854       --> ...............................ggATCGAGAAATGGACCGG
FD961953       --> ...............................ggATCGAGAAATGGACCGG
EX772723       --> ..................................TCGAGAAATGGACCGG
FD979905       --> ..................................TCGAGAAATGGACCGG

               51     -    101
UN17204        --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCAC-TGA
EW719225       <-- ..................................................
FD975875       <-- ..................................................
FD958533       <-- ..................................................
FD958602       <-- ..................................................
FD976416       <-- ..................................................
EX776610       <-- ..................................................
EW723261       --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
EY916263       --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGA
EW715221       --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
EV524650       --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGA
FD961854       --> TTCATTTCTCGATCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
FD961953       --> TTCATTTCTCGATCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
EX772723       --> TTCAAGTAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGT
FD979905       --> TTCAAGGAGCGACCAAGGTACGACGACGGCGAAGAGTCTCCTCCACCTGA

               101    -    151
UN17204        --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCATTCGCCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- CTCTGACGGCGGAGACGAAGATGGAGGGACACCGGAGCCTTTCACCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719225       <-- CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCATTCGCCGGAG  Raphanus sativus var. oleiformis
FD975875       <-- ..........................GGACACCGGAGCCTTTCGCCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958533       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD958602       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976416       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776610       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW723261       --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCATTCGCCGGAG  Raphanus sativus cv Early Scarlet Globe
EY916263       --> CTCTGACGGCGGAGACGAAGATGGAGGGACACCGGAGCCTTTCACCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715221       --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCATTCGCCGGAG  Raphanus sativus var. oleiformis
EV524650       --> CTCTGACGGCGGAGACGAAGGTGGAGGGACACCAGAGCCTTTCGCCGGAG  Raphanus raphanistrum subsp. maritimus
FD961854       --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCACTCGCCGGAG  Raphanus raphanistrum subsp. maritimus
FD961953       --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCACTCGCCGGAG  Raphanus raphanistrum subsp. maritimus
EX772723       --> CTCAGACGGCGGAGACGAAGACGGAGGGACACCGGAGCCATTCGCCGGAG  Raphanus raphanistrum subsp. landra
FD979905       --> CTCTGACGGCGGAGACGAAGATGGAGGGACACCGGAGCCTTTCGCCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN17204        --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
EW719225       <-- CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
FD975875       <-- CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
FD958533       <-- ......TCAGGAGGAAAGCGTCTCGTTACAGAGGGCACCGTGGCGACTAT
FD958602       <-- ...........AGGAAAGCGTCTCGTTACAGAGGGCACCGTGGCGACTAT
FD976416       <-- ..................................................
EX776610       <-- ..................................................
EW723261       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
EY916263       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
EW715221       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
EV524650       --> CTAAAATCAGGAGAAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
FD961854       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGGGCACCGTGGCGACTAT
FD961953       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGGGCACCGTGGCGACTAT
EX772723       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT
FD979905       --> CTAAAATCAGGAGGAAAGCGTCTCGTTACAGAGAGCACCGTGGCGACTAT

               201    -    251
UN17204        --> CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- CTCCACGTCTCCACTCGTCCTAGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719225       <-- CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus sativus var. oleiformis
FD975875       <-- CTCCACGTCTCCACTCGTCCTAGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958533       <-- CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. maritimus
FD958602       <-- CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. maritimus
FD976416       <-- ............................TGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776610       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW723261       --> CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus sativus cv Early Scarlet Globe
EY916263       --> CTCCACGTCTCCACTCGTCCTAGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715221       --> CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus sativus var. oleiformis
EV524650       --> CTCCACGTCTCCTCTCGTCCTGGCCTGATGAAGATCCTCGAGAAACAAGG  Raphanus raphanistrum subsp. maritimus
FD961854       --> CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. maritimus
FD961953       --> CTCCACGTCTCCACTCGTCCTGGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. maritimus
EX772723       --> CTCCACGTCTCCACTCGTCCTG-CCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. landra
FD979905       --> CTCCACGTCTCCACTCGTCCTAGCCTGATGAAGATTCTCGAGAAACAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN17204        --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGACGG
EW719225       <-- TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
FD975875       <-- TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGACGG
FD958533       <-- TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
FD958602       <-- TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
FD976416       <-- TGACACGTCGGTACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
EX776610       <-- ..................................................
EW723261       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
EY916263       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGACGG
EW715221       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
EV524650       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
FD961854       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
FD961953       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGTCGG
EX772723       --> TGACACGTCGATACGATTCGCGGATA........................
FD979905       --> TGACACGTCGATACGATTCGCGGATAAGGTGTTGAAGTTCACAGGGACGG

               301    -    351
UN17204        --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EW719225       <-- GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
FD975875       <-- GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
FD958533       <-- GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
FD958602       <-- GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
FD976416       <-- GGAAGATGAAAAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EX776610       <-- ..................................................
EW723261       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EY916263       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EW715221       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EV524650       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTTGCGATCTACCTG
FD961854       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
FD961953       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG
EX772723       --> ..................................................
FD979905       --> GGAAGATGAAGAGGCGAATCTTCATCCTGACGGACTTCGCGATCTACCTG

               351    -    401
UN17204        --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
EW719225       <-- ATCGATCCCGAGAGCGAGGCTATGACGCGGAGGATAGGTTTGGCTGCGGT
FD975875       <-- ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
FD958533       <-- ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
FD958602       <-- ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
FD976416       <-- ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
EX776610       <-- ..................................................
EW723261       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
EY916263       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
EW715221       --> ATCGATCCCGAGAGCGAGGCTATGACGCGGAGGATAGGTTTGGCTGCGGT
EV524650       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
FD961854       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
FD961953       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT
EX772723       --> ..................................................
FD979905       --> ATCGATCCCGAGAGCGAGGCGATGACGCGGAGGATAGGTTTGGCTGCGGT

               401    -    451
UN17204        --> GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- GGAGAAGGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCTGTGATTA
EW719225       <-- GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
FD975875       <-- GGAGAAGGTGTGTTTGAGCAAGCTGAGCGATAACTTTTTCGCTGTGATTA
FD958533       <-- GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
FD958602       <-- GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
FD976416       <-- GGAGAAAGTGTGTCTGAGCAAGCTTAGCGATAACTTCTTCGCGGTGATTA
EX776610       <-- ..................................................
EW723261       --> GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
EY916263       --> GGAGAAGGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCTGTGATTA
EW715221       --> GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
EV524650       --> GGAGAAGGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCTGTGATTA
FD961854       --> GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
FD961953       --> GGAGAAAGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCGGTGATTA
EX772723       --> ..................................................
FD979905       --> GGAGAAGGTGTGTCTGAGCAAGCTGAGCGATAACTTCTTCGCTGTGATTA

               451    -    501
UN17204        --> TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- TCCCGACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EW719225       <-- TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD975875       <-- TCCCGACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD958533       <-- TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD958602       <-- TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD976416       <-- TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EX776610       <-- ..................................................
EW723261       --> TCCCCACGGAGTATGTTCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EY916263       --> TCCCGACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EW715221       --> TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EV524650       --> TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD961854       --> TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
FD961953       --> TCCCCACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT
EX772723       --> ..................................................
FD979905       --> TCCCGACGGAGTATGATCTGCTCATGGCCAGCACTCGCAAGACTGAGCTT

               501    -    551
UN17204        --> GTTCAGGTTATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- GTTCAGGTCATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
EW719225       <-- GTTCAGGTTATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD975875       <-- GTTCAGGCCATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD958533       <-- GTTCAGGTTATGGTCGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD958602       <-- GTTCAGGTTATGGTCGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD976416       <-- GTTCAGGTTATGGTTGATGTGACTAAGAG.....................
EX776610       <-- ..................................................
EW723261       --> GTTCAGGTTATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
EY916263       --> GTTCAGGTCATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
EW715221       --> GTTCAGGTTATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
EV524650       --> GTTCAGGTTATGGTTGATATGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD961854       --> GTTCAGGTTATGGTCGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
FD961953       --> GTTCAGGTTATGGTCGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA
EX772723       --> ..................................................
FD979905       --> GTTCAGGCCATGGTTGATGTGACTAAGAGTGCTTCTGACTATGAGCTTGA

               551    -    601
UN17204        --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
EW719225       <-- AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD975875       <-- AGTGCTTCTCTCCAGCAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD958533       <-- AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD958602       <-- AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD976416       <-- ..................................................
EX776610       <-- .......................................CTCGTTAGTGA
EW723261       --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
EY916263       --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
EW715221       --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
EV524650       --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD961854       --> AGTGCTTCTCTCCAACAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA
FD961953       --> AGTGCTTCTCTCCAACAGGTTTGA..........................
EX772723       --> ..................................................
FD979905       --> AGTGCTTCTCTCCAGCAGGTTTGAGTACAATGCTTCTGCCTCGTTAGTGA

               601    -    651
UN17204        --> AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- AGGAAGTTTCATTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719225       <-- AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus sativus var. oleiformis
FD975875       <-- AGGAAGTTTCATTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958533       <-- AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. maritimus
FD958602       <-- AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. maritimus
FD976416       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776610       <-- AGGAAGTTTCGTTTGAGGAAGCTGAAGGGG-TATCAAGACCAGTTT-AAG  Raphanus raphanistrum subsp. landra
EW723261       --> AGGAAGTTTCGTTTGAGGAAGCTGAAAGGGGTATCAAGACCAGTTTAAAG  Raphanus sativus cv Early Scarlet Globe
EY916263       --> AAGAAGTTTCATTTGAGGAAGCTGAAAGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715221       --> AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus sativus var. oleiformis
EV524650       --> AGGAAGTTTCGTTTG...................................  Raphanus raphanistrum subsp. maritimus
FD961854       --> AGGAAGTTTCGTTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. maritimus
FD961953       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX772723       --> ..................................................  Raphanus raphanistrum subsp. landra
FD979905       --> AGGAAGTTTCATTTGAGGAAGCTGAAGGGGGTATCAAGACCAGTTTTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN17204        --> TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
EW719225       <-- TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
FD975875       <-- TGGAAGTGGCTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
FD958533       <-- TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
FD958602       <-- TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
FD976416       <-- ..................................................
EX776610       <-- TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAA-TTTCGTTTT
EW723261       --> TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
EY916263       --> TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
EW715221       --> TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
EV524650       --> ..................................................
FD961854       --> TGGAAGTGACTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT
FD961953       --> ..................................................
EX772723       --> ..................................................
FD979905       --> TGGAAGTGGCTGCACCTCACCTTTCCTCGCTGTTCATAAACTTTCGTTTT

               701    -    751
UN17204        --> GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- GGCTACTAAAAAGCTCTACTCAGAGCGGTAATGTTGTTTATTATTATT--
EW719225       <-- GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
FD975875       <-- GGCTACTAAAAAGCTCTACTCAGAGCGGTAATGTTGTTTATTATTATTAT
FD958533       <-- GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
FD958602       <-- GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
FD976416       <-- ..................................................
EX776610       <-- GGCTA-TAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
EW723261       --> GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
EY916263       --> GGCTACTAAAAAGCTCTACTCAGAGCGGTAATGTTGTTTATTATTATT--
EW715221       --> GGCTACTAAAAAGCTCAACTCAGAGCGGTAATGTTGTTTATTATTATT--
EV524650       --> ..................................................
FD961854       --> GGCTACTAAAAA......................................
FD961953       --> ..................................................
EX772723       --> ..................................................
FD979905       --> GGCTACTAAAAA......................................

               751    -    801
UN17204        --> -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACTTTTTTT-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACCCTTTTT-T
EW719225       <-- -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACTTTTTTT-A
FD975875       <-- TCTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACCCTTTTT-T
FD958533       <-- -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACTTTTTTT-A
FD958602       <-- -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACTTTTTTT-A
FD976416       <-- ..................................................
EX776610       <-- -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAA-TTTTTTT-A
EW723261       --> -CTGTTTAATCTTGTTTTTCC.............................
EY916263       --> -CTGTTTAATCTTGTTTTTCCTCAGACATGA...................
EW715221       --> -CTGTTTAATCTTGTTTTTCCTCAGACATGAATTGTGTAACTTTTTTTTA
EV524650       --> ..................................................
FD961854       --> ..................................................
FD961953       --> ..................................................
EX772723       --> ..................................................
FD979905       --> ..................................................

               801    -    851
UN17204        --> TTATATTGACAAGTGTATTTTCTCAAAATTTATGTATGAATTGAGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911966       <-- TTATATTGACAAGTGTATTTTCTacc........................
EW719225       <-- TTATATTGACAAGTGTATTTTCTac.........................
FD975875       <-- TTATATTGACAAGTGTATTTTCTgc.........................
FD958533       <-- TTATATTGACAAGTGTATTTTCTac.........................
FD958602       <-- TTATATTGACAAGTGTATTTTCTac.........................
FD976416       <-- ..................................................
EX776610       <-- TTATATTGACAAGTGTATTTTCTCAAAATTTATGTATGAATTGAGTCCAA
EW723261       --> ..................................................
EY916263       --> ..................................................
EW715221       --> TTATATTGACAAGTGTATTTTCTac.........................
EV524650       --> ..................................................
FD961854       --> ..................................................
FD961953       --> ..................................................
EX772723       --> ..................................................
FD979905       --> ..................................................

               851    -    901
UN17204        --> AAAAAAA
                   ~~~~~~~
EY911966       <-- .......
EW719225       <-- .......
FD975875       <-- .......
FD958533       <-- .......
FD958602       <-- .......
FD976416       <-- .......
EX776610       <-- AAAAAAA
EW723261       --> .......
EY916263       --> .......
EW715221       --> .......
EV524650       --> .......
FD961854       --> .......
FD961953       --> .......
EX772723       --> .......
FD979905       --> .......