RadishBase

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Alignment for radish unigene UN17210

               1      -     51
UN17210        --> GGGTCTTGTTAACAAAGAAAACTCTCTCTCAAGGCTTTTCTCTATAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> GGGTCTTGTTAACAAAGAAAACTCTCTCTCAAGGCCTTTCTCTATAAGAT
EV566347       --> ........ggAACAAAGAAAACTCTCTCTCAAGGCTTTTCTCTATAAGAT
EV548963       --> ...........................................ggAAGAT
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> ..................................................

               51     -    101
UN17210        --> CTCTCGTTCATATTCCCAGAGAAGAACACGACTGACTGATTTCATCTG--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> CTCTCGTTCATATTCCCAGAGAAGAACACGACTGACTGATTTCATCTG--
EV566347       --> CTCTCGTTCATATTCCCAGAGAAGAACACGACTGACTGATTTCATCTG--
EV548963       --> CTCTCGTTCATATTCCCAGAGAAGAACACGACTGACTGATTTCATCTG--
EX764739       --> ...............gCAGAGAAGAACACGACTGACTGATTTCATCTG--
EY940181       --> .....................ggGAACACGACTGACTGATTTCATCTG--
EX770018       --> .........................gCACGACTGACTGATTTCATCTG--
FD543921       --> .........................ggACGACTGACTGATTTCATCTGTG
EV550120       --> ..................................................

               101    -    151
UN17210        --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
EV566347       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
EV548963       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
EX764739       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
EY940181       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
EX770018       --> AGATTATGGAGAGATTACAGCGAATCTTCGGCGCCGGCGGGGGTCTAGGC
FD543921       --> AGATTATGGAGAGATTACAGCGAATCTTCGGTGCCGGCGGGGGTCTAGGC
EV550120       --> ..................................................

               151    -    201
UN17210        --> CACGCATCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> CACGCATCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
EV566347       --> CACGCATCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
EV548963       --> CACGCATCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
EX764739       --> CACGCGTCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
EY940181       --> CACGCATCTCCCGATTCCCCAACTTTCGACACCTCGGAGCAAGTCTACAT
EX770018       --> CACGCATCTCCCGATTCCCCAACTCTCGACACCTCGGAGCAAGTCTACAT
FD543921       --> CACGCCTCTCCTGATTCCCCTACTCTCGACACCTCGGAGCAAGTCTACAT
EV550120       --> ..................................................

               201    -    251
UN17210        --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> CTCCTCCCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
EV566347       --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
EV548963       --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTTC
EX764739       --> CTCCTCTCTCGCTCCCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTTC
EY940181       --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
EX770018       --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
FD543921       --> CTCCTCTCTCGCTCTCCTCAAGATGCTCAAACACGGGAGAGCTGGAGTGC
EV550120       --> ..................................................

               251    -    301
UN17210        --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..................................................
EY904193       <-- ..................................................
EV571499       <-- ..................................................
FD539645       <-- ..................................................
EY904281       <-- ..................................................
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EV566347       --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EV548963       --> CTATGGAGGTGATGGGATTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EX764739       --> CTATGGAGGTGATGGGATTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EY940181       --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EX770018       --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
FD543921       --> CTATGGAGGTGATGGGGTTGATGCTGGGAGAGTTCGTGGATGAGTACACT
EV550120       --> ..................................................

               301    -    351
UN17210        --> GTTAGAGTTGTGGATGTATTCGCGATGCCGCAGAGTGGGACTGGTGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ..............................gAGAGTGGGACTGGTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539645       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> GTTAGAGTTGTGGATGTATTCGCGATGCCGCAGAGTGGGACTGGTGTGAG  Raphanus sativus var. oleiformis
EV566347       --> GTTAGAGTTGTGGATGTATTCGCGATGCCGCAGAGTGGGACTGGTGTGAG  Raphanus raphanistrum subsp. landra
EV548963       --> GCTAGGGTTGTGGATGTATTCGCGATGCCTCAGAGTGGGACTGGTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> GTTAGGGTTGTGGATGTATTCGCGATGCCTCATAGTGGGACTGGTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> GTTAGAGTTGTGGATGTATTCGCGATGCCGCAGAGTGGGACTGGTGTGAG  Raphanus sativus cv Early Scarlet Globe
EX770018       --> GTTAGAGTTGCGGATGTATTCGCGATGCCGCAGAGTGGGACTGGTGTGAG  Raphanus raphanistrum subsp. landra
FD543921       --> GTTAGGGTTGTGGATGT-TT-GCGATGCCTCAGAGTGGGACTGGTGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> ..............................gAGAGTGGGACTGGTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN17210        --> TGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539645       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> TGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus sativus var. oleiformis
EV566347       --> TGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. landra
EV548963       --> CGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> CGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> TGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus sativus cv Early Scarlet Globe
EX770018       --> TGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. landra
FD543921       --> TGTTGAAGCTGTTGATCATGTTTTCCAGACTAGTATGCTTGACATGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> CGTTGAAGCTGTTGATCATGTTTTTCAGACTAATATGCTTGACATGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN17210        --> AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- ...................AATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- ....................ATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. landra
FD539645       <-- ....................................ATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> AACGGACTGGCAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus sativus var. oleiformis
EV566347       --> AACAGACTGGCAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. landra
EV548963       --> AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> AACAGACTGGCAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus sativus cv Early Scarlet Globe
EX770018       --> AACAGACTGGCAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. landra
FD543921       --> AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> AACAGACTGGAAGACCTGAAATGGTGGTGGGTTGGTATCATTCACATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN17210        --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EY904193       <-- GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EV571499       <-- GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
FD539645       <-- GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EY904281       <-- ..GTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EY911725       <-- ..................................................
EY935978       <-- ..................................................
FD936454       <-- ..................................................
FD940613       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EV566347       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EV548963       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EX764739       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCGACAGAGTTT
EY940181       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EX770018       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
FD543921       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT
EV550120       --> GGGTTTGGATGCTGGCTTTCCGGTGTTGATATTAATACTCAACAGAGTTT

               501    -    551
UN17210        --> TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- TGAAGCTTTGAACCAGCGAGCTGTAGCTGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. landra
FD539645       <-- TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- TGAAGCTT-GAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- .............................................TCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> TGAAGCTTTGAACCAGCGAGCTGTAGCTGTGGTGGTTGATCCTATTCAGA  Raphanus sativus var. oleiformis
EV566347       --> TGAAGCTTTGAACCAGCGAGCTGTAGCTGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. landra
EV548963       --> TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> TGAAGCTTTGAACCAGCGAGCTGTAGCTGTGGTGGTTGATCCTATTCAGA  Raphanus sativus cv Early Scarlet Globe
EX770018       --> TGAAGCTTTGAACCAGCGAGCTGTAGCTGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. landra
FD543921       --> TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> TGAAGCTTTGAACCAGCGAGCTGTCGCAGTGGTGGTTGATCCTATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN17210        --> GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- GTGTGAAGGGTAAAGTGGTGATTGATGCTTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. landra
FD539645       <-- GTGTGAAGGGTAAAGCGGTGATTGATGCGTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> GTGTGAAGGGTAAAGTGGTGATTGATGCTTTCCGCTCGATAAACCCTCAG  Raphanus sativus var. oleiformis
EV566347       --> GTGTGAAGGGTAAAGTGGTGATTGATGCTTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. landra
EV548963       --> GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAAC......  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> GTGTGAAGGGTAAAGTGGTGATTGATGCTTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. landra
FD543921       --> GTGTGAAGGGTAAAGCGGTGATTGATGCGTTCCGCTCGATAAACCCTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> GTGTGAAGGGTAAAGTGGTGATTGATGCGTTCCGCTCGATAAACCCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN17210        --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. landra
FD539645       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACTTCCAACCTTGGACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGC..  Raphanus sativus var. oleiformis
EV566347       --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. landra
EV548963       --> ACCATTATGCTTG.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. landra
FD543921       --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACTTCCAACCTTGGACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> ACCATTATGCTTGGGCAAGAGCCTCGTCAAACAACGTCCAACCTTGGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN17210        --> CCTGAACAAACCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CCTGAACAAACCATCGATCCAGGCCTTGATT-ATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- CCTGAACAAGCCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- CCTGAACAAACCATCGATCCAGGCCTTGATTCATGGATTGAGCAGACACT  Raphanus raphanistrum subsp. landra
FD539645       <-- CCTGAACAAGCCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- CCTGAACAAGCCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- CCTGAACAAACCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- ..................CCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- ..................................................  Raphanus sativus var. oleiformis
FD940613       --> ..................................................  Raphanus sativus var. oleiformis
EV566347       --> CCTGAACAAACCATCGATCCAGGCCTTGATTCATGGATTGAGCAGACACT  Raphanus raphanistrum subsp. landra
EV548963       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> CCTGAACAAACCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. landra
FD543921       --> CCTGAACAAGCCATCGATCCAGGCCTTGATTCATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> CCTGAACAAACCATCGATCCAGGCCTTGATT-ATGGATTGAACAGACACT  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN17210        --> ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EY904193       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EV571499       <-- ATTATTCAATAGCCGTCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
FD539645       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EY904281       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EY911725       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EY935978       <-- ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTGGAGGAGAAGATG
FD936454       <-- ..................................................
FD940613       --> ..................................................
EV566347       --> ATTATTCAATAGCCGTCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
FD543921       --> ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG
EV550120       --> ATTATTCAATAGCCATCAACTACAGGAAGAACGAGCTCGAGGAGAAGATG

               751    -    801
UN17210        --> TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGCTAAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- TTACTAAACCTCCACAAGAAAAAATGGACTGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. landra
FD539645       <-- TTACTAAACCTCCACAAGAAAAAATGGACTGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- TTACTAAACCTCCACAAGAAAAAATGGACTGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGTTAAGACG  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- .................................................G  Raphanus sativus var. oleiformis
FD940613       --> ..................................................  Raphanus sativus var. oleiformis
EV566347       --> TTACTTAACC........................................  Raphanus raphanistrum subsp. landra
EV548963       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> TTACTTAACCTCCACAAGAAGACATGGACAG...................  Raphanus raphanistrum subsp. landra
FD543921       --> TTACTAAACCTCCACAAGAA-AAATGGACTGATGGCCTGACGCTA-GACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> TTACTTAACCTCCACAAGAAGAAATGGACAGATGGCCTGACGCTAAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN17210        --> CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- CTTTGACACTCACTCCAAGACAAACGAACAGACCGTTCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA  Raphanus raphanistrum subsp. landra
FD539645       <-- CTTTGACACTCACTCCAAGACAAACGAACAGACCGTTCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- CTTTGACACTCACTCCAAGACAAACGAACAGACCGTTCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- CTTTGACACCCACTCCAAGACAAGCGAACAGACGGTGCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA  Raphanus sativus var. oleiformis
FD940613       --> ..................................................  Raphanus sativus var. oleiformis
EV566347       --> ..................................................  Raphanus raphanistrum subsp. landra
EV548963       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> ..................................................  Raphanus raphanistrum subsp. landra
FD543921       --> CTTTGACACTCACTCCAA................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> CTTTGACACCCACTCCAAGACAAACGAACAGACGGTGCAGGAAATGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN17210        --> ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
EY904193       <-- GCTTGGCTGCTAAGTATAACAAGGCGGTGCAAGAGGAGGACGAGTTGTCA
EV571499       <-- ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
FD539645       <-- GCTTGGCTGCTAAGTATAACAAGGCGGTGCAAGAGGAGGACGAGTTGTCA
EY904281       <-- GCTTTGCCGCTAAGTATAACAAGGCGGTGCAAGAGGAGGACGAGTTGTCA
EY911725       <-- ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
EY935978       <-- ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
FD936454       <-- ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> ACTTGGCTGCTAAGTATAACAAGGCGGTACAAGAGGAGGACGAGTTGTCA

               901    -    951
UN17210        --> CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
EY904193       <-- CCAGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCGAAGAAGCA
EV571499       <-- CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
FD539645       <-- CCAGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCGAAGAAGCA
EY904281       <-- CCAGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCGAAGAAGCA
EY911725       <-- CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
EY935978       <-- CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
FD936454       <-- CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> CCGGAGAAACTGGCGATTGTGAATGTGGGAAGACAAGACGCAAAGAAGCA

               951    -   1001
UN17210        --> TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
EY904193       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
EV571499       <-- TCTGGAAGAACATGTTTCCAACTTGACGTCTTCCAACATTGTTCAGACAC
FD539645       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
EY904281       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
EY911725       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACGTTGTTCAGACAC
EY935978       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
FD936454       <-- TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> TCTGGAAGAACATGTTTCCAACTTGATGTCTTCCAACATTGTTCAGACAC

               1001   -   1051
UN17210        --> TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
EY904193       <-- TAGGCACCATGCTTGACACTGTTGGCTTCTAGAGAGCTTCTTCACTTTTC
EV571499       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
FD539645       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
EY904281       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
EY911725       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
EY935978       <-- TAGGCACCATGCTTGACACTGTTGTTTTCTAGAGAGCTTTTTCACTTTTC
FD936454       <-- TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> TAGGCACCATGCTTGACACTGTTGTCTTCTAGAGAGCTTCTTCACTTTTC

               1051   -   1101
UN17210        --> CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
EY904193       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
EV571499       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
FD539645       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
EY904281       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
EY911725       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
EY935978       <-- CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
FD936454       <-- CAGCCAGTAATTACTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> CAGCCAGTAATTGCTATGGTTCAATCAGTTGGCTAGAATGTTGAGCTTTG

               1101   -   1151
UN17210        --> TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- TTCTTCTTATGCACCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. landra
FD539645       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- TTCTTCTTATGCATCTCTTTGTTTTCTGTTGAATCTTTTCTTATGTCCTA  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- TTCTTTTTATGCATCTCTTTGTTTTCTGTTGAATCTTCTCTTATGTCCTA  Raphanus sativus var. oleiformis
FD940613       --> ..................................................  Raphanus sativus var. oleiformis
EV566347       --> ..................................................  Raphanus raphanistrum subsp. landra
EV548963       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> ..................................................  Raphanus raphanistrum subsp. landra
FD543921       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> TTCTTCTTATGCATCTCTTTGTTT..........................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1151   -   1201
UN17210        --> CCTCCTAGCACTTGATAAGTTTGTATTGTACTATCCGGTTTCCTTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- CCTCCTAGCACTTGATAAGTTTGTATTTTACTATCCGGTTTCCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904193       <-- TCTCCTAGCACTTGATAAGTTTGTATTATACTATCCGGTTTCGTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571499       <-- CCTCCTAGCACTTGATAAGTTTGTATTGTACTATCCGGTTTCCTTCTTTC  Raphanus raphanistrum subsp. landra
FD539645       <-- TCTCCTAGCACTTGATAAGTTTGTATTATACTATCCGGTTTCGTTCTTc.  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904281       <-- TCTCCTAGCACTTGATAAGTTTGTATTATACTATCCGGTTTCGTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911725       <-- CCTCCTAGCACTTGATAAGTTTGTATTGTACTATCCGGTTTCCTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935978       <-- CCTCCTAGCACTTGATAAGTTTGTATTGTACTATCCGGTTTCCTTCTTTC  Raphanus sativus cv Early Scarlet Globe
FD936454       <-- CCTCCTAGCACTTGATAAGTTTGTATTGTACTATCCGGTTTCCTTCTTTT  Raphanus sativus var. oleiformis
FD940613       --> ..................................................  Raphanus sativus var. oleiformis
EV566347       --> ..................................................  Raphanus raphanistrum subsp. landra
EV548963       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940181       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770018       --> ..................................................  Raphanus raphanistrum subsp. landra
FD543921       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV550120       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1201   -   1251
UN17210        --> TATGAAGGCCATGGATTGATTACTATTTCATTCAAAACTAAATAGTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545465       <-- TATGAAGGCCATGGATTGATTACTATTTCATTCAAAACTAAATAGTGGg.
EY904193       <-- TATGAAGGCCATGGATTGATTAg...........................
EV571499       <-- TATGAAGGCCATGGATTGATTACTATTTCATTCAAAACTt..........
FD539645       <-- ..................................................
EY904281       <-- TATGAAGGCCATGGATTGA...............................
EY911725       <-- TATGAAGGCCATGGATTGATTACTATTTCATTCAAAACTAAATAGTGGTA
EY935978       <-- TATGAAGGCCATGGATTGATTACTATTTCATTCAAAACTAAATAGTGGTA
FD936454       <-- TATGAAGGCCATGGATTGA...............................
FD940613       --> ..................................................
EV566347       --> ..................................................
EV548963       --> ..................................................
EX764739       --> ..................................................
EY940181       --> ..................................................
EX770018       --> ..................................................
FD543921       --> ..................................................
EV550120       --> ..................................................

               1251   -   1301
UN17210        --> CTTCAAATTCC
                   ~~~~~~~~~~~
EV545465       <-- ...........
EY904193       <-- ...........
EV571499       <-- ...........
FD539645       <-- ...........
EY904281       <-- ...........
EY911725       <-- CTTC.......
EY935978       <-- CTTCAAATTCC
FD936454       <-- ...........
FD940613       --> ...........
EV566347       --> ...........
EV548963       --> ...........
EX764739       --> ...........
EY940181       --> ...........
EX770018       --> ...........
FD543921       --> ...........
EV550120       --> ...........