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Alignment for radish unigene UN17217

               1      -     51
UN17217        --> AATGGCGAGAGTTCTAATCTCGTCTCCATCATCCTTCCTCGGCTCGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> AATGGCGAGAGTTCTAATCTCGTCTCCATCATCCTTCCTCGGCTCGCCTC
FY435242       --> ................ATCTCGTCTCCATCATCCTTCCTCGGCTCGCCTC
FY452143       --> ................ATCTCGTCTCCATCATCCTTCCTCGGCTCGCCTC
FY446594       --> .................TCTCGTCTCC-TCATCCTTCCTCGGCTCGCCTC
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               51     -    101
UN17217        --> TGCTCAAAACCTCTCCCTCTCCCTCTCCCCGTTACTTAGGAGGAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TGCTCAAAACCTCTCCCTCTCCCTCTCCCCGTTACTTAGGAGGAGGAGGA
FY435242       --> TGCTCAAAACCTCTCCCTCTCCCTCTCCCCGTTACTTAGGAGGAGGAGGA
FY452143       --> TGCTCAAAACCTCTCCCTCTCCCTCTCCCCGTTACTTAGGAGGAGGAGGA
FY446594       --> TGCTCAAAACCTCTCCCTCTCCCTCTCCCCGTTACTTAGGAGGAGGAGGA
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               101    -    151
UN17217        --> AGCGTTCAATTTCGTAATAAGCATCTCAGCAGCACTACGACGGTACGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> AGCGTTCAATTTCGTAATAAGCATCTCAGCAGCACTACGACGGTACGGTT
FY435242       --> AGCGTTCAATTTCGTAATAAGCATCTCAGCAGCACTACGACGGTACGGTT
FY452143       --> AGCGTTCAATTTCGTAATAAGCATCTCAGCAGCACTACGACGGTACGGTT
FY446594       --> AGCGTTCAATTTCGTAATAAGCATCTCAGCAGCACTACGACGGTACGGTT
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               151    -    201
UN17217        --> CAGCTTAAACGAGATCCCTCCTCTCCACGGCTCCGTCGACATCGGAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> CAGCTTAAACGAGATCCCTCCTCTCCACGGCTCCGTCGACATCGGAGCGA
FY435242       --> CAGCTTAAACGAGATCCCTCCTCTCCACGGCTCCGTCGACATCGGAGCGA
FY452143       --> CAGCTTAAACGAGATCCCTCCTCTCCACGGCTCCGTCGACATCGGAGCGA
FY446594       --> CAGCTTAAACGAGATCCCTCCTCTCCACGGCTCCGTCGACATCGGAGCGA
FY449880       --> ................................................GA
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               201    -    251
UN17217        --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................CTCTCCTCTACACCATAGCCGACGCAGCCGTC
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
FY435242       --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
FY452143       --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
FY446594       --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
FY449880       --> TTCTCACCAGAGCCGAGTCTCTCCTCTACACCATAGCCGACGCAGCCGTC
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               251    -    301
UN17217        --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FY435242       --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FY452143       --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FY446594       --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FY449880       --> GTCGGCGCTGCTGATTCGGCAGCTCTATCAACAACAACTGATCCCGCCGC
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               301    -    351
UN17217        --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FY435242       --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FY452143       --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FY446594       --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FY449880       --> CGTGCAGAAGAGTGGCGGTTGGTTCGGATTCATCTCCGATGGCATGGAGT
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               351    -    401
UN17217        --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FY435242       --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FY452143       --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FY446594       --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FY449880       --> TGGTTCTTAAGTTTTTGAAGGATGGACTTACGGCTGTTCACGTGCCGTAC
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               401    -    451
UN17217        --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FY435242       --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FY452143       --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FY446594       --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FY449880       --> GCTTACGGATTTGCTATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
FD946092       --> ..gTACGGATTTGCGATTATTTTGCTTACTATCATCGTCAAGGCAGCTAC
EV550215       --> ................................gATCGTCAAGGCAGTTAC
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               451    -    501
UN17217        --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- CTATCC............................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
FY435242       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
FY452143       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
FY446594       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
FY449880       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
FD946092       --> CTATCCTTTGACTAAGCAACAGGTTGAATCAACAATGGCGATGCAAAATC
EV550215       --> CTATCCTTTGACAAAGCAACAGGTTGAATCAACGATGGCGATGCAAAATC
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               501    -    551
UN17217        --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FY435242       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FY452143       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FY446594       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FY449880       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FD946092       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
EV550215       --> TCCAACCGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
FD532124       --> ......gGAAGATTAAAGCCATTCAACAACGTTACGCAGGCAATCAGGAG
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               551    -    601
UN17217        --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FY435242       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FY452143       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FY446594       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FY449880       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FD946092       --> AGGATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
EV550215       --> AGAATACAACTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
FD532124       --> AGGATACAGCTAGAGACGTCACGCTTGTATAAACAAGCTGGTGTCAATCC
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               601    -    651
UN17217        --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
FY435242       --> A.................................................
FY452143       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
FY446594       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
FY449880       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
FD946092       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCAGTTTGGATTGGTT
EV550215       --> ATTGGCAGGTTGCTTGCCAACTTTAGCTACCATACCTGTTTGGATTGGTC
FD532124       --> ATTGGCAGGTTGTTTGCCAACTTTAGCTACCATACCAGTTCGGATTGGTT
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               651    -    701
UN17217        --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
FY435242       --> ..................................................
FY452143       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
FY446594       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
FY449880       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
FD946092       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTGTTTACAGAAGGT
EV550215       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTATTTACAGAAGGT
FD532124       --> TATACCAAGCTCTCTCCAACGTGGCCAACGAGGGACTATTTACAGAAGGT
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               701    -    751
UN17217        --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCC.
FY435242       --> ..................................................
FY452143       --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
FY446594       --> TTCTTTTGGATTCCATCTCTTGGTGGAC-AACAAGTATAGCTGCTC....
FY449880       --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
FD946092       --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
EV550215       --> TTCTTTTGGATTC-ATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
FD532124       --> TTCTTTTGGATTCCATCTCTTGGTGGACCAACAAGTATAGCTGCTCGCCA
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               751    -    801
UN17217        --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTCGTGGACGGGCATCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- .......................................CGGGCATCCAC
EY927974       <-- ..................................................
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTCGTGGACGGGCATCCAC
FY446594       --> ..................................................
FY449880       --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTCGTGGACGGGCATCCAC
FD946092       --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTCGTGGACGGGCATCCAC
EV550215       --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTTGTGGACGGGCGTCCAC
FD532124       --> GAGTGGATCTGGCGTCTCATGGCTTTTCCCTTTTGTGGACGGGCATCCAC
EY931499       --> ..........................................GCATCCAC
EX757134       --> ...........................................gATCCAC
FD548933       --> ..................................................
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               801    -    851
UN17217        --> CATTGGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCCTGTTCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................  Raphanus sativus cv GSK3-1
FD528679       <-- CATTGGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCTTGTTCTCCTT  Raphanus raphanistrum subsp. maritimus
EY927974       <-- .................................TCTTGCCTGTTCTCCTT  Raphanus sativus var. oleiformis
FD538162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545053       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539114       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936996       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545538       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937183       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY450559       --> ..................................................  Raphanus sativus cv GSK3-1
FY435242       --> ..................................................  Raphanus sativus cv GSK3-1
FY452143       --> CATTAGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCCTGGTCTCCTT  Raphanus sativus cv GSK3-1
FY446594       --> ..................................................  Raphanus sativus cv GSK3-1
FY449880       --> CATTAGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCCTGTTCTCCTT  Raphanus sativus cv GSK3-1
FD946092       --> CATTAGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCCTGTTCTCCTT  Raphanus sativus cv Early Scarlet Globe
EV550215       --> CGTTGGGATGGGGTGACACCACTGCGTATCTTGTCTTGCCTGTTCTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532124       --> CATTGGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCTTGTTCTCCTT  Raphanus raphanistrum subsp. maritimus
EY931499       --> CATTGGGATGGGGTGATACCGCCGCGTATCTTGTCTTGCCTGTTCTCCTT  Raphanus sativus var. oleiformis
EX757134       --> CATTGGGATGGGGTGACACCGCCGCGTATCTTGTCTTGCCTGTTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548933       --> .............gGACACCGCTGCGTATCTTGTCTTGCCTGTTCTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541996       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941406       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN17217        --> ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
EY927974       <-- ATTGTCTCCCAGTACGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
FD538162       <-- ..................................................
FD545053       <-- ..................................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ATT...............................................
FY446594       --> ..................................................
FY449880       --> ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
FD946092       --> ATTGTCTCCCATTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
EV550215       --> ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
FD532124       --> ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
EY931499       --> ATTGTCTCCCAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
EX757134       --> ATTGTCTCACAGTATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
FD548933       --> ATTGTCTCCCAGCATGTGTCAATGGAGATTATGAAGCCTCCTCAAACAGA
FD541996       --> ..................................................
EY941406       --> ..................................................
FD971646       --> ..................................................

               901    -    951
UN17217        --> CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
EY927974       <-- CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
FD538162       <-- ...............GAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
FD545053       <-- ...........................................CCACTCA
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCCCTCA
FD946092       --> CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCCCTCA
EV550215       --> -GATCCTGCGCAGAAGAACACACTTCTTGTTTTCAAGTTTCTTCCACTCA
FD532124       --> CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
EY931499       --> TGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
EX757134       --> CGATCCTGCGCAGAAGAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
FD548933       --> CGATCCTGCGCAGAAGAACACACTTCTTGTTTTCAAGTTTCTTCCACTCA
FD541996       --> ...............GAACACACTTCTCGTTTTCAAGTTTCTTCCACTCA
EY941406       --> ..................................................
FD971646       --> ..................................................

               951    -   1001
UN17217        --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
EY927974       <-- TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD538162       <-- TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD545053       <-- TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD946092       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
EV550215       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD532124       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
EY931499       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
EX757134       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD548933       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
FD541996       --> TGATTGGCTACTTTGCATTGTCTGTCCCATCAGGATTATCTATATACTGG
EY941406       --> ..................................................
FD971646       --> ..................................................

               1001   -   1051
UN17217        --> TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- TTCACAAACAATGTGCTTAGCACTGCCCAACAAGTTTGGCTGCGTAAACT
EY927974       <-- TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD538162       <-- TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD545053       <-- TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD539114       <-- .................TAGCACCGCCCAACAAGTTTGGCTGGGTAAACT
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> TTCACAAACAATGTACTTAGCACCGCCCAACAAGTTTGGCTGCGTAAA..
FD946092       --> TTCACAAACAATGTACTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
EV550215       --> TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD532124       --> TTCACAAACAATGTGCTTAGCACTGCCCAACAAGTTTGGCTGCGTAAACT
EY931499       --> TTCACAAACAATGTGCTTAGCACCGCACAACAAGTTTGGCTGCGTAAACT
EX757134       --> TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD548933       --> TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
FD541996       --> TTCACAAACAATGTGCTTAGCACCGCCCAACAAGTTTGGCTGCGTAAACT
EY941406       --> ..................................................
FD971646       --> ..................................................

               1051   -   1101
UN17217        --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
EY927974       <-- AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
FD538162       <-- AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
FD545053       <-- AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAGTAATAACTG
FD539114       <-- AGGTGGGGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> AGGTGGCGCAGCGCCTGCA...............................
EV550215       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
FD532124       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
EY931499       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
EX757134       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAATCGGAATAATAACTG
FD548933       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAGTAATAACTG
FD541996       --> AGGTGGCGCAGCGCCTGCAGTCAATGAAAACGCAAGCGGAATAATAACTG
EY941406       --> ..................................................
FD971646       --> ..................................................

               1101   -   1151
UN17217        --> CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGAAAG
EY927974       <-- CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGACAG
FD538162       <-- CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCAGGCGAAAG
FD545053       <-- CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGAAAG
FD539114       <-- CGGG-ACGGGCAAAGAGATTTATTGTTCAGCCTGATGATGCTGGGGACAG
EY936996       <-- ............gAGAGGTTTATTGCTCAGCCTGATGATGCTGGCGAGAG
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTG.......
FD532124       --> CGGGGACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGAAAG
EY931499       --> CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCTGGCGAAAG
EX757134       --> CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCAGGCGAAAG
FD548933       --> CGGG-ACGGG........................................
FD541996       --> CGGG-ACGGGCAAAGAGATCTATTGCTCAGCCTGATGATGCAGGCGAAAG
EY941406       --> ............gAGAGGTCTATTGCTCAGCCTGATGATGCTGGCGAGAG
FD971646       --> ..................................................

               1151   -   1201
UN17217        --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGTAGCAAGAAGAACAAGGCCG
EY927974       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
FD538162       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
FD545053       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
FD539114       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
EY936996       <-- ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGTAGCAAGAAGAACAAG-CCG
EY931499       --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGTAGCAAGAAGAACAAGGCCG
EX757134       --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
FD548933       --> ..................................................
FD541996       --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
EY941406       --> ATTTAGACAATTAAAAGAGCAAGAGAAGCGCAGCAAGAAGAACAAGGCCG
FD971646       --> ..................................................

               1201   -   1251
UN17217        --> TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCTGAATCAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................  Raphanus sativus cv GSK3-1
FD528679       <-- TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCTGAATCAGAAGAA  Raphanus raphanistrum subsp. maritimus
EY927974       <-- TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCAGAATCAGAAGAA  Raphanus sativus var. oleiformis
FD538162       <-- TTGCGAAAGATACAGTTGAACTCCTGGAATCTCAGTCTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545053       <-- TTGCGAAAGATACAGTTGAACTCCTCGAATCTCAGTCTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539114       <-- TTGGGAAAGATACAGTTGAACTCCTGGAATTTCAGTTTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936996       <-- TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTTTGAATCAGAAGAA  Raphanus sativus cv Early Scarlet Globe
EV545538       <-- ................................CAGTTTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937183       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY450559       --> ..................................................  Raphanus sativus cv GSK3-1
FY435242       --> ..................................................  Raphanus sativus cv GSK3-1
FY452143       --> ..................................................  Raphanus sativus cv GSK3-1
FY446594       --> ..................................................  Raphanus sativus cv GSK3-1
FY449880       --> ..................................................  Raphanus sativus cv GSK3-1
FD946092       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550215       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532124       --> TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCTGAt.........  Raphanus raphanistrum subsp. maritimus
EY931499       --> TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCTGAATCAGAAGAA  Raphanus sativus var. oleiformis
EX757134       --> TTGCGAAAGATACAGTTGAACTCCTGGAATCTCAGTCTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548933       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541996       --> TTGCGAAAGATACAGTTGAACTCCTGGAATCTCAGTCTGAATCAGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941406       --> TTGCGAAAGATACAGTTGAACTCCTAGAATCTCAGTCTGAATCAGAAGAA  Raphanus sativus cv Early Scarlet Globe
FD971646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN17217        --> GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
EY927974       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
FD538162       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
FD545053       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
FD539114       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
EY936996       <-- GGGTCGGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
EV545538       <-- GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAACGTTAGCTTCGAG
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
EX757134       --> GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
FD548933       --> ..................................................
FD541996       --> GGGTCCGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
EY941406       --> GGGTCGGACGATGAGGAAGAAGAGGTTCGTGAAGGAGCGTTAGCTTCGAG
FD971646       --> ..................................................

               1301   -   1351
UN17217        --> CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
EY927974       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
FD538162       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGA--AAAAAGATCGA
FD545053       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
FD539114       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
EY936996       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
EV545538       <-- CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
EY937183       <-- .................................................A
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
EX757134       --> CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
FD548933       --> ..................................................
FD541996       --> CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAA--AAAAGATCGA
EY941406       --> CACAAGCAAGCCATTGCCTGACGTTGGCCAAAGGAGAAGCAAAAGATCGA
FD971646       --> ..............................................ggGA

               1351   -   1401
UN17217        --> AGCGAAAACGTACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................  Raphanus sativus cv GSK3-1
FD528679       <-- AGCGAAAACGCACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. maritimus
EY927974       <-- AGCGAAAACGTACTGTATAGAAAACTTAAAACAAAACAATAGACAATTGT  Raphanus sativus var. oleiformis
FD538162       <-- AGCGAAAACGTACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545053       <-- AGCGAAAACGCACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539114       <-- AGGGAAAACGTACTGTATAGAAAACTTAAAACAAAACAATAAACAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936996       <-- AGGGAAAACGCACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus sativus cv Early Scarlet Globe
EV545538       <-- AGGGAAAACGCACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937183       <-- AGGGAAAACGTACTGTATAGAAAACTTAAAACAAAACAATAGACAATTGT  Raphanus sativus cv Early Scarlet Globe
FY450559       --> ..................................................  Raphanus sativus cv GSK3-1
FY435242       --> ..................................................  Raphanus sativus cv GSK3-1
FY452143       --> ..................................................  Raphanus sativus cv GSK3-1
FY446594       --> ..................................................  Raphanus sativus cv GSK3-1
FY449880       --> ..................................................  Raphanus sativus cv GSK3-1
FD946092       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550215       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532124       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY931499       --> AGCGAAAACGCACTGTATAGAAAACTTAAAACAAAGCAATAGACAATTGT  Raphanus sativus var. oleiformis
EX757134       --> AGCGAAAACGTACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548933       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541996       --> AGCGAAAACGTACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941406       --> AGCGAAAACGCACTGTATAGAAAACTTAAAACAAAACAA-AGACAATTGT  Raphanus sativus cv Early Scarlet Globe
FD971646       --> AGCGAAAACGTACTGTATAGAAA-CTTAAAACAAAACAA-AGACAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1401   -   1451
UN17217        --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
EY927974       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FD538162       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FD545053       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FD539114       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATTTTTGATATATTTTTGC
EY936996       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
EV545538       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
EY937183       <-- GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
EX757134       --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FD548933       --> ..................................................
FD541996       --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
EY941406       --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC
FD971646       --> GAGGGAGGTTTGGAGTCTGTCCTTTAGTTTGATCTTTGATATATTTTTGC

               1451   -   1501
UN17217        --> ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
EY927974       <-- ATATACCAA----GTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
FD538162       <-- ATATACCAATTAAGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
FD545053       <-- ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
FD539114       <-- ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
EY936996       <-- ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
EV545538       <-- ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
EY937183       <-- ATATACCAA----GTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAtaagcaaaaa
EX757134       --> ATATACCAATTAAGTCCTGC-ATACCTAAACGTTTGTAAAt.........
FD548933       --> ..................................................
FD541996       --> ATATACCAATTAAGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
EY941406       --> ATATACCAA---AGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA
FD971646       --> ATATACCAATTAAGTCCTGCAATACCTAAACGTTTGTAAAATTAAGGCAA

               1501   -   1551
UN17217        --> AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATCAAAAGTAAATTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- AGAGGTCATTCTAAAGTTg...............................
EY927974       <-- AAAGGTCATTCTAAAGTT................................
FD538162       <-- AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATCAAAAGTAAATTGATT
FD545053       <-- AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATCAAAAGTAAATCGATT
FD539114       <-- AGAGGTCATTTTAAAGTTAAATGCTTTTGTTGATC...............
EY936996       <-- AGAGGTCATTTTAAAGTTAAATGCTTTTGTTGATC...............
EV545538       <-- AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATC...............
EY937183       <-- AAAGGTCATTTTAAAGTTAAATGCTTTTGTTGATCAAAAGTAAATT....
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATCAAAAGTAAATTGATT
EY941406       --> AGAGGTCATTCTAAAGTTAAATGCTTTTGTTGATC...............
FD971646       --> AGAGGTCATTCTAAAGTT................................

               1551   -   1601
UN17217        --> GTATTCCTTATGTGATTCACCTTGTCTGTATTAACAACCTAGATGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- ..................................................
FD528679       <-- ..................................................
EY927974       <-- ..................................................
FD538162       <-- GTATTCCTTATGTGATTCACCTTGTCTGTATTAACAACCTAGATGTTTGT
FD545053       <-- GTATTCCTTCTGTGATc.................................
FD539114       <-- ..................................................
EY936996       <-- ..................................................
EV545538       <-- ..................................................
EY937183       <-- ..................................................
FY450559       --> ..................................................
FY435242       --> ..................................................
FY452143       --> ..................................................
FY446594       --> ..................................................
FY449880       --> ..................................................
FD946092       --> ..................................................
EV550215       --> ..................................................
FD532124       --> ..................................................
EY931499       --> ..................................................
EX757134       --> ..................................................
FD548933       --> ..................................................
FD541996       --> GTATTCCTTATGTGATTCACCTTGTCTGTATTAACAACCTAGATGTTTGT
EY941406       --> ..................................................
FD971646       --> ..................................................

               1601   -   1651
UN17217        --> ACTATGACTTTCATGATGTCC
                   ~~~~~~~~~~~~~~~~~~~~~
FY438693       <-- .....................
FD528679       <-- .....................
EY927974       <-- .....................
FD538162       <-- ACTATGACTTTCATGATGTCC
FD545053       <-- .....................
FD539114       <-- .....................
EY936996       <-- .....................
EV545538       <-- .....................
EY937183       <-- .....................
FY450559       --> .....................
FY435242       --> .....................
FY452143       --> .....................
FY446594       --> .....................
FY449880       --> .....................
FD946092       --> .....................
EV550215       --> .....................
FD532124       --> .....................
EY931499       --> .....................
EX757134       --> .....................
FD548933       --> .....................
FD541996       --> ACTATGACTTTCATGATGTCC
EY941406       --> .....................
FD971646       --> .....................