RadishBase

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Alignment for radish unigene UN17310

               1      -     51
UN17310        --> GATTTGCCTTTGGCTCACATCCTTGAGTTAGCAGCTGAGAGTGTAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> GATTTGCCTTTGGCTCACATCCTTGAGTTAGCAGCTGAGAGTGTAATGGC
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               51     -    101
UN17310        --> TACTATTGGGAGTGCTATTGGATATGGATCTCCCTTGACGCTCACTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> TACTATTGGGAGTGCTATTGGATATGGATCTCCCTTGACGCTCACTGATA
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               101    -    151
UN17310        --> CTTCGAACAAGATTAAAAAGGTCACAAAGGGAGATGTCACAGCGCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> CTTCGAACAAGATTAAAAAGGTCACAAAGGGAGATGTCACAGCGCTAAAG
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               151    -    201
UN17310        --> CCTACTATAATGACAGCTGTTCCAGCCATTCTTGATCGTGTCAGGGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> CCTACTATAATGACAGCTGTTCCAGCCATTCTTGATCGCGTCAGGGATGG
FD980410       --> ...gCTATAATGACAGCTGTTCCAGCCATTCTTGATCGTGTCAGGGACGG
EW722703       --> .......gAATGACAGCTGTTCCAGCCATTCTTGATCGTGTCAGGAATGG
EV549131       --> ..................................ATCGTGTCAGGGACGG
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               201    -    251
UN17310        --> TGTCCGCAAAAAGGTTGATGCAAAGGGAGGAGTGGCAAAGAAACTGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> TGTCCGCAAAAAGGTTGATGCAAAGGGAGGAGTGGCAAAGAAACTGTTTG
FD980410       --> TGTCCGCAAAAAGGTTGATGCAAAGGGAGGAGTGGCAAAGAAACTGTTTG
EW722703       --> TGTCCGCAAAAAGGTTGATGCAAAGGGAGGAGTGGCAAAGAAACTGTTTG
EV549131       --> TGTCCGCAAAAAGGTTGATGCAAAGGGAGGAGTGGCAAAGAAACTGTTTG
EW722704       --> ....................CAAAGGGAGGAGTGGCAAAGAAACTGTTTG
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               251    -    301
UN17310        --> ACTTTGCATATGCTAGGAGACTATCTGCAATCAATGGAAGCTGGTTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> ACTTTGCATATGCTAGGAGACTATCTGCAATCAATGGAAGCTGGTTTGGA
FD980410       --> ACTTTGCATATGCTAGGAGATTATCTGCAATCAATGGAAGCTGGTTTGGA
EW722703       --> ACTTTGCATATGCTAGGAGACTATCTGCAATCAATGGAAGCTGGTTTGGA
EV549131       --> ACTTTGCATATGCTAGGAGATTATCTGCAATCAATGGAAGCTGGTTTGGA
EW722704       --> ACTTTGCATATGCTAGGAGACTATCTGCAATCAATGGAAGCTGGTTTGGA
FD979271       --> ..........................................GGTTTGGA
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ..................................................

               301    -    351
UN17310        --> GCCTGGGGACTGGAGAAGCTCCTCTGGGATCTGCTTGTGTTTGGTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532807       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGATCTGCTTGTGTTTGGTAAAAT  Raphanus raphanistrum subsp. maritimus
FD980410       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGATCTGCTTGTGTTTGGTAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGACCTGCTTGTGTTTGGTAAAAT  Raphanus sativus cv Early Scarlet Globe
EV549131       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGATCTGCTTGTGTTTGGTAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGACCTGCTTGTGTTTGGTAAAAT  Raphanus sativus cv Early Scarlet Globe
FD979271       --> GCCTGGGGACTGGAGAAGCTCCTCTGGGATCTGCTTGTGTTTGGTAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> ........................gGGGACCTGCTTGTGTTTGGTAAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> ..................................................  Raphanus raphanistrum subsp. landra
EX897677       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW722881       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN17310        --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTACTTGCTCTCTGGAGGAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532807       --> CCGTGCAGTCTTGGGAGGTCAACTCCGTTATTTGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. maritimus
FD980410       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTACTTGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTATTTGCTCTCTGGAGGAGCCC  Raphanus sativus cv Early Scarlet Globe
EV549131       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTACTTGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTATTTGCTCTCTGGAGGAGCCC  Raphanus sativus cv Early Scarlet Globe
FD979271       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTACTTGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> CCGTGCTGTCTTGGGAGGTCAACTCCGTTACTTGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> ................................gGCTCTCTGGAGGAGCCC  Raphanus raphanistrum subsp. landra
EX897677       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW722881       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN17310        --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ..................................................
EW727490       <-- ..................................................
EX901398       <-- ..................................................
FD976290       <-- ..................................................
FD554975       <-- ..................................................
FD532807       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
FD980410       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
EW722703       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
EV549131       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
EW722704       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
FD979271       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
EX757602       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGGGGCTCCA
FD559236       --> CTCTTTCTGGTGACACTCAGAGATTCATTAACATATGCGTTGTGGCTCCA
EX897677       --> ..................................................
EW722881       --> ..................................................

               451    -    501
UN17310        --> ATTGGTCAGGGATATGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ...............................................CTC  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532807       --> ATTGGCCAGGGATATGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC  Raphanus raphanistrum subsp. maritimus
FD980410       --> ATCGGTCAGGGATATGGACTAACAGAGACTTGTGCTGGGGGAACCTTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> ATTGGCCAGGGATATGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC  Raphanus sativus cv Early Scarlet Globe
EV549131       --> ATCGGTCAGGGATATGGACTAACAGAGACTTGTGCTGGGGGAACCTTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> ATTGGCCAGGGATATGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC  Raphanus sativus cv Early Scarlet Globe
FD979271       --> ATCGGTCAGGGATATGGACTAACAGAGACTTGTGCTGGGGGAACCTTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> ATCGGTCAGGGATATGGACTAACAGAGACTTGTGCTGGGGGAACCTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> ATTGGCCAGGGATATGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC  Raphanus raphanistrum subsp. landra
EX897677       --> .............ggGGACTAACAGAGACTTGTGCTGGTGGAACCTTCTC  Raphanus sativus cv Early Scarlet Globe
EW722881       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN17310        --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCCCTTCCTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCCCTTCCTTGCT  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- .............................TGGGTGCTCCCTTTCCTTGCT  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532807       --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCCCTTCCTTGCT  Raphanus raphanistrum subsp. maritimus
FD980410       --> GGAGTTTGATGATACATCTGTTGGGCGTGTGGGTGCTCCACTTCCTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCCCTTCCTTGCT  Raphanus sativus cv Early Scarlet Globe
EV549131       --> GGAGTTTGATGATACATCTGTTGGGCGTGTGGGTGCTCCACTTCCTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCCCTTCCTTGCT  Raphanus sativus cv Early Scarlet Globe
FD979271       --> GGAGTTTGATGATACATCTGTTGGGCGTGTGGGTGCTCCACTTCCTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> GGAGTTTGATGATACGCCTGTTGGGCGTGTGGGTGCTCCACTTCCTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCTCTTCCTTGCT  Raphanus raphanistrum subsp. landra
EX897677       --> GGAGTTTGATGATACATCTGTTGGCCGTGTGGGTGCTCCTCTTCCTTGCT  Raphanus sativus cv Early Scarlet Globe
EW722881       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN17310        --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EW727490       <-- CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EX901398       <-- .............AATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
FD976290       <-- ............................AGGCGGGTACTTAATCAGTGAT
FD554975       <-- .................................GGTACTTAATCAGTGAT
FD532807       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
FD980410       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EW722703       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EV549131       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EW722704       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
FD979271       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EX757602       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
FD559236       --> CCTTTGTTAAGCTGATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EX897677       --> CCTTTGTTAAGCTAATAGACTGGCCGGAAGGCGGGTACTTAATCAGTGAT
EW722881       --> ..................................................

               601    -    651
UN17310        --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EW727490       <-- AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EX901398       <-- AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
FD976290       <-- AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
FD554975       <-- AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCAAATATTACACT
FD532807       --> AAGCCAATGCCCCGTGGTGAAATTGTGATTGGTGGCTCTAATATTACACT
FD980410       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EW722703       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EV549131       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EW722704       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
FD979271       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EX757602       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
FD559236       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCAAATATTACACT
EX897677       --> AAGCCAATGCCCCGTGGTGAAATTGTAATTGGTGGCTCTAATATTACACT
EW722881       --> ..................................................

               651    -    701
UN17310        --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAGGTTGATG  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAGGTTGATG  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. landra
FD532807       --> TGGGTATTTCAAGAATGA................................  Raphanus raphanistrum subsp. maritimus
FD980410       --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAAGTTGATG  Raphanus sativus cv Early Scarlet Globe
EV549131       --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAGGTTGATG  Raphanus sativus cv Early Scarlet Globe
FD979271       --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> TGGGTATTTCAAGAATGAAGAGAAGACCAAAGAAGTTTACAAGGTTGATG  Raphanus raphanistrum subsp. landra
EX897677       --> TGGGTATTTCAAGAATGAAGAGAAGACTAAAGAAGTTTACAAGGTTGATG  Raphanus sativus cv Early Scarlet Globe
EW722881       --> ................................................gG  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN17310        --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGCTTCGCCCT
EW727490       <-- AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGCTTCGCCCT
EX901398       <-- AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
FD976290       <-- AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
FD554975       <-- AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
FD532807       --> ..................................................
FD980410       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
EW722703       --> AAAAGGGGATGAGGTGGTTCTAC...........................
EV549131       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
EW722704       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGCTTCGCCCT
FD979271       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
EX757602       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
FD559236       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
EX897677       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCACCCT
EW722881       --> AAAAGGGGATGAGGTGGTTCTACACAGGAGACATAGGACAGTTTCGCCCT

               751    -    801
UN17310        --> GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- GATGGTTGCCTTGAGATTATAGACAGAAGGAAGGATATCGTTAAACTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- GATGGTTGCCTTGAGATTATAGACAGAAAGAAGGATATTGTTAAACTTCA  Raphanus raphanistrum subsp. landra
FD532807       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980410       --> GATGGTTGCCTTGAGATTATAGACa.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549131       --> GATGGTTGCCTTGAGATTATAGACAGAAAGAAGGATATCGTTAAACTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe
FD979271       --> GATGGTTGCCTTGAGATTATAGACAGAAAGAAGGATATCGTTAAACTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> GATGGTTGCCTTGAGATTATAGACAGAAAGAAGGATATTGTTAAACTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> GATGGTTGCCTTGAGATTATAGACAGAAAGAAGGATATTGTTAAACTTCA  Raphanus raphanistrum subsp. landra
EX897677       --> GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe
EW722881       --> GATGGTTGCCTTGAGATTATAGACCGTAAGAAGGATATTGTTAAACTTCA  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN17310        --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTCAGTATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAGGCTGCTCTAAGTATAA  Raphanus raphanistrum subsp. landra
FD532807       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980410       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549131       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTCAGTATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe
FD979271       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTCAGTATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTCAGTATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAGGCTGCTCTAAGTATAA  Raphanus raphanistrum subsp. landra
EX897677       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe
EW722881       --> GCATGGGGAATATGTCTCCTTGGGCAAAGTGGAAGCTGCTCTAAGTATAA  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN17310        --> GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC  Raphanus sativus cv Early Scarlet Globe
EW727490       <-- GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC  Raphanus sativus cv Early Scarlet Globe
EX901398       <-- GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTTC  Raphanus sativus cv Early Scarlet Globe
FD976290       <-- GCCCATACGTTGAAAACATAATGGTTCATGCGGATCCGTTTTACTCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554975       <-- GCCCATACGTAGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC  Raphanus raphanistrum subsp. landra
FD532807       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980410       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722703       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549131       --> GCCCATACGTTGAAAACATAATGGTTCATGCGGATCCGTTTTACTCCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722704       --> GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC  Raphanus sativus cv Early Scarlet Globe
FD979271       --> GCCCATACGTTGAAAACATAATGGTTCATGCGGATCCGTTTTACTCTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757602       --> GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACTCTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559236       --> GCCCATACGTAGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTAC  Raphanus raphanistrum subsp. landra
EX897677       --> GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTTC  Raphanus sativus cv Early Scarlet Globe
EW722881       --> GCCCATACGTTGAAAACATAATGGTTCATGCTGATCCGTTTTACAGTTTC  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN17310        --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
EW727490       <-- TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
EX901398       <-- TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
FD976290       <-- TGTGTGGCTCTTGCGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
FD554975       <-- TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGT-GGGCGTC
EW722704       --> TGTGTGGC..........................................
FD979271       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
EX757602       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTCGGCGTC
FD559236       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
EX897677       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC
EW722881       --> TGTGTGGCTCTTGTGGTTGCTGCGCAACAAACGCTTGAAGGTTGGGCGTC

               951    -   1001
UN17310        --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- AAAGCAGGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
EW727490       <-- AAAGCAGGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
EX901398       <-- AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
FD976290       <-- AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
FD554975       <-- AAAGCAAGGAATAGAGTCCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
EW722704       --> ..................................................
FD979271       --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAA-GAAC
EX757602       --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
FD559236       --> AAAGCAAGGAATAGAGTCCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
EX897677       --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC
EW722881       --> AAAGCAAGGAATAGAGTTCACCAACTTCGAAGAGCTGTGTGCTAAAGAAC

               1001   -   1051
UN17310        --> AAACCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- AAACCGTGAAAGAAGTTTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
EW727490       <-- AAACCGTGAAAGAAGTTTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
EX901398       <-- AAACCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
FD976290       <-- AAACCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
FD554975       <-- AGATCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> AA-CCGTGAAAGAAGTGTATGCGTCTCTT.....................
EW722704       --> ..................................................
FD979271       --> AAACCGTG..........................................
EX757602       --> AAACCGTGAAAGAAGTGTATGCGTCTCTTG....................
FD559236       --> AGATCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
EX897677       --> AAACCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG
EW722881       --> AAACCGTGAAAGAAGTGTATGCGTCTCTTGTTAAGGCGGCTAAACAGTCG

               1051   -   1101
UN17310        --> CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCGGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCAGCTCC
EW727490       <-- CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCAGCTCC
EX901398       <-- CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCGGCTCC
FD976290       <-- CGGTTGGAGAAGTTTGAGGTACCATCAAAGATCAAGTTGTTGGCGGCTCC
FD554975       <-- CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCGGCTCC
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCGGCTCC
EX897677       --> CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAAGTTGTTGGCGGCTCC
EW722881       --> CGGTTGGAGAAGTTTGAGATACCAGCAAAGATCAGGTTGTTGGCGGCTCC

               1101   -   1151
UN17310        --> ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ATGGACGCCAGAGTCAGGGTTGGTGACAGCAGCACTAAAGCTTAAAAGAG
EW727490       <-- ATGGACGCCAGAGTCAGGGTTGGTGACAGCAGCACTAAAGCTTAAAAGAG
EX901398       <-- ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAGAG
FD976290       <-- ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAGAG
FD554975       <-- ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAGAG
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAG..
EX897677       --> ATGGACGCCAGAGTCAGG-TTAGTGACAGCAGCACT..............
EW722881       --> ATGGACGCCAGAGTCAGGGTTAGTGACAGCAGCACTAAAGCTTAAAAGAG

               1151   -   1201
UN17310        --> ATGTAATTAGGAAGGAGTTCTTTGAAGATCTCACCAAGCTATATGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- ATGTTATTAGGAAGGAGTTCTTTGAAGATCTCACCAAGCTATATTCTTCC
EW727490       <-- ATGTTATTAGGAAGGAGTTCTTTGAAGATCTCACCAAGCTATATTCTTCC
EX901398       <-- ATGTAATTAGGAAGGAGTTCTCTGAAGATCTCACCAAGCTATATGCTGCC
FD976290       <-- ATGTAATTAGGAAGGAGTTCTCTGAAGATCTCACCAAGCTATATGCTGCC
FD554975       <-- ATGTAATTAGGAAGGAGTTCTTTGAAGATCTCACCAAGCTATATGCTTCC
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> ATGTAATTAGGAAGGAGTTCTCTGAAGATCTCACCAAGCTATATGCTGCC

               1201   -   1251
UN17310        --> TAAATC-TT--TCTTCTTTCGTCTTCTACTATCTTT-TTTTTTTGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- TAAATCACT--TCTTCTTTCGTCTTCTACTATCTTT-TTTTTTTGTTTTT
EW727490       <-- TAAATCACT--TCTTCTTTCGTCTTCTACTATCTTT-TTTTTTTGTTTTT
EX901398       <-- TAAATC-TT--T-TT-TTTCGTCTTTTACTATCTTT-TTTTTTT-TTTTT
FD976290       <-- TAAATC-TTCTTCTTCTTTCCTCTTCTACTATCTTTCTTTTTTTTTTTTT
FD554975       <-- TAA-TC-TT---CTTCTT-CGTCTTCTACTATCTTT-TTTT--TGT---T
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> TAAATC-TT---CTTCTT-CGTCTTCTACTATCTTT-TTTTTTTtaacta

               1251   -   1301
UN17310        --> TAACTTTCTATAAACACACAACTTGTCTGTCTTGCTCTTTAGTT-GGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- TAACTTTCTATAAACACACAACTTGTCTGTCTTGCTCTTTAGTT-GGTTT
EW727490       <-- TAACTTTCTATAAACACACAACTTGTCTGTCTTGCTCTTTAGTT-GGTTT
EX901398       <-- TAACTATCTATAAACACACAACTCGTCTGTCTTGCTCTTTAGTT-GGTTT
FD976290       <-- TAACTTTCTATAAACACACAACTTGTCTGTCTTGCTCTTTGGTT-GGTTC
FD554975       <-- AAACTTTCTATAAACACACAACTTGTCTGTCTTGCTCTTTAGTTCGGTTT
FD532807       --> ..................................................
FD980410       --> ..................................................
EW722703       --> ..................................................
EV549131       --> ..................................................
EW722704       --> ..................................................
FD979271       --> ..................................................
EX757602       --> ..................................................
FD559236       --> ..................................................
EX897677       --> ..................................................
EW722881       --> tctataaa..........................................

               1301   -   1351
UN17310        --> GCTTGAGAGTAGAAAAAAAGAGTGTTGAC..........
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727188       <-- GCTTGAG................................
EW727490       <-- GCTTGAGAGTg............................
EX901398       <-- GCTTGAGAGTAGAAAAAAAGAGTGTTGACg.........
FD976290       <-- ACTTGAGAGTAGA..........................
FD554975       <-- GCTTGAGAGTAGAAAAAAAGAGTGTTGACtgttgacacg
FD532807       --> .......................................
FD980410       --> .......................................
EW722703       --> .......................................
EV549131       --> .......................................
EW722704       --> .......................................
FD979271       --> .......................................
EX757602       --> .......................................
FD559236       --> .......................................
EX897677       --> .......................................
EW722881       --> .......................................