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Alignment for radish unigene UN17317

               1      -     51
UN17317        --> ATTTTAAATGTTATAACTTATTGTCAAAGTATAAAGTCTGGGCTAACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ATTTTAAATGTTATAACTTATTGTCAAAGTATAAAGTCTGGGCTAACAGG
EV568211       <-- ..................................................
EV570027       <-- ..................................................
FD563499       <-- ..................................................
EX757802       <-- ..................................................
FD946358       <-- ..................................................
EV536756       <-- ..................................................
EX887524       <-- ..................................................
EV572992       --> .................................................t
FD567125       --> ..................................................
EV541126       --> ..................................................
EX761294       --> ..................................................

               51     -    101
UN17317        --> CTAACAGAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- CTAACAGAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EV568211       <-- ...gCAGAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EV570027       <-- .....AGAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
FD563499       <-- ......GAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EX757802       <-- ..........AAGATAACCCACGATATTAT-AAACATGAAGTTATAGTTT
FD946358       <-- ..........AAGATA-CCCACGATATTA--TAACATGAAGTTATAGTT-
EV536756       <-- ............GATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EX887524       <-- ..................................................
EV572992       --> tttgCAGAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
FD567125       --> ......GAGAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EV541126       --> ........GAAAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT
EX761294       --> ..........AAGATAACCCACGATATTATTAAACATGAAGTTATAGTTT

               101    -    151
UN17317        --> AGGAGGT-ATACTAAAACAAGAGCACA-TGTA-TAACACAATTACACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- AGGAGGTTATACTAAAACAAGAGCACA-TGTA-TAACACAATTACACACA  Raphanus raphanistrum subsp. maritimus
EV568211       <-- AGGAGGT-ATACTAAAACAAGAGCACAATGTA-TAACACAATTACACATA  Raphanus raphanistrum subsp. landra
EV570027       <-- AGGAGGT-ATACTAAAACAAGAGCACAATGTA-TAACACAATTACACATA  Raphanus raphanistrum subsp. landra
FD563499       <-- AGGAGGT-ATACTAAAACAAGAGCACA-TGTA-TAACACAATTACAAACA  Raphanus sativus var. oleiformis
EX757802       <-- AGGAGGT-ATACTAAAACAAGAGCTCA-TGTAATAACACAATTACACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- AGGAGGT-ATACTAAA-CAAGAGCACA-TGTA-TA-CACAATTACAAACA  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- AGGAGGT-ATACTAAAACAAGAGCTCA-TGTAATAACACAATTACACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- ...................AGAGCACA-TGTA-TAACACAATTACAAACA  Raphanus sativus var. oleiformis
EV572992       --> AGGAGGT-ATACTAAAACAAGAGCACAATGTA-TAACACAATTACACATA  Raphanus raphanistrum subsp. landra
FD567125       --> AGGAGGT-ATACTAAAACAAGAGCACA-TGTA-TAACACAATTACAAACA  Raphanus sativus var. oleiformis
EV541126       --> AGGAGGT-ATACTAAAACAAGAGCTCA-TGTAATAACACAATTACACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> AGGAGGT-ATACTAAAACAAGAGCTCA-TGTAATAACACAATTACACACA  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN17317        --> TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- CAAATGGATTGTCTTGGATCACTTCCCACATGGAAGCTAACACTATTTCA  Raphanus raphanistrum subsp. maritimus
EV568211       <-- TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. landra
EV570027       <-- TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. landra
FD563499       <-- TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus sativus var. oleiformis
EX757802       <-- CAAATGGATTGTCTTGGATTACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- CAAATGGATTGTCTTGGATTACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- TAAATGGAT-GTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus sativus var. oleiformis
EV572992       --> TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. landra
FD567125       --> TAAATGGATTGTCTTGGATCACTTCACACATGGAAGCTAACATTATTTCA  Raphanus sativus var. oleiformis
EV541126       --> CAAATGGATTGTCTTGGATTACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> CAAATGGATTGTCTTGGATTACTTCACACATGGAAGCTAACATTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN17317        --> CTTCTCACCGAGTCTGACAATACTTTGAGTGAGATAATTGATTCAGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- CTTCTCACCGAGACTGACAATGCTTTGGGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. maritimus
EV568211       <-- CTTCTCACCGAGTCTGACAATACTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. landra
EV570027       <-- CTTCTCACCGAGTCTGACAATACTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. landra
FD563499       <-- CTTCTCACCGAGTCTGACAATACTTTGAGTGAGGTAATTGATTCAGACCT  Raphanus sativus var. oleiformis
EX757802       <-- CTTCTCACCGAGTCTGACAATGCTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- CTTATCACCGAGTCTGACAATACTTTGAGTGAGGTAATTGATTCAGACCT  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- CTTCTCACCGAGTCTGACAATGCTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- CTTCTCACCGAGTCTGACAATACTTTGAGTGAGGTAATTGATTCAGACCT  Raphanus sativus var. oleiformis
EV572992       --> CTTCTCACCGAGTCTGACAATACTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. landra
FD567125       --> CTTCTCACCGAGTCTGACAATACTTTGAGTGAGGTAATTGATTCAGACCT  Raphanus sativus var. oleiformis
EV541126       --> CTTCTCACCGAGTCTGACAATGCTTTGAGTGAGATAATTGATTCAGACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> CTTCTCACCGAGTCTGACAATGCTTTGAGTGAGATAATTGATTCAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN17317        --> TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- TGATCTTAGGCTTCTTCACGACCATCACCGAGCAATGAGCATGATGAGCG  Raphanus raphanistrum subsp. maritimus
EV568211       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. landra
EV570027       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. landra
FD563499       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGGTGAGCA  Raphanus sativus var. oleiformis
EX757802       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- TGATCTTAGGCTTCTTCACGAT---CACCGAGCAATGAGCATGGTGAGCA  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGGTGAGCA  Raphanus sativus var. oleiformis
EV572992       --> TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. landra
FD567125       --> TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGGTGAGCA  Raphanus sativus var. oleiformis
EV541126       --> TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> TGATCTTAGGCTTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN17317        --> CAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- CAGTAATCACTGACGCTGCCGAGAACCGCCCTCTTGATCGCTCCATAACC  Raphanus raphanistrum subsp. maritimus
EV568211       <-- CAGTAATCACTGACGCTCCCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. landra
EV570027       <-- CAGTAATCACTGACGCTCCCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. landra
FD563499       <-- CAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus sativus var. oleiformis
EX757802       <-- CAGTAATCACTGACGCTACCTAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- CAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- CAGTAATCACTGACGCTACCTAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- CAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus sativus var. oleiformis
EV572992       --> CAGTAATCACTGACGCTCCCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. landra
FD567125       --> CAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus sativus var. oleiformis
EV541126       --> CAGTAATCACTGACGCTACCTAGAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> CAGTAATCACTGACGCTACCTAAAACCGCCCTCTTGATAGCTCCATAACC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN17317        --> GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ATGGCTTCCAACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. maritimus
EV568211       <-- GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. landra
EV570027       <-- GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. landra
FD563499       <-- GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus sativus var. oleiformis
EX757802       <-- ATGGCTTCCAACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- ATGGCTTCCAACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus sativus var. oleiformis
EV572992       --> GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. landra
FD567125       --> GTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus sativus var. oleiformis
EV541126       --> ATGGCTTCCAACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> ATGGCTTCCAACAACGAGAAAAGAAGCATGGTGTTTATCAACAACCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN17317        --> AAAGGATGTTCCTTGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ACAGGATATTCCTTGCATCGCCTTCAAAAACTTCTATCGTTGCGCCATGA  Raphanus raphanistrum subsp. maritimus
EV568211       <-- AAAGGATATTCCTTGGACCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. landra
EV570027       <-- AAAGGATATTCCTTGGATCGCCTTCAAAAACTTCTATCATTGCGCCATAA  Raphanus raphanistrum subsp. landra
FD563499       <-- ACAGGATGTTCCTCGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus sativus var. oleiformis
EX757802       <-- AAAGGATGTTCCTTGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- ACAGGATGTTCCTTGCATCGCCTTCAAAAACTTCGATCTTTGCCCCATGA  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- AAAGGATGTTCCTTGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- ACAGGATGTTCCTCGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus sativus var. oleiformis
EV572992       --> AAAGGATATTCCTTGGACCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. landra
FD567125       --> ACAGGATGTTCCTCGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus sativus var. oleiformis
EV541126       --> AAAGGATGTTCCTTGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> AAAGGATGTTCCTTGCATCGCCTTCAAAAACTTCTATCATTGCGCCATGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN17317        --> ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. maritimus
EV568211       <-- ACCGACTTGCTCTGACAGAGTGATTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. landra
EV570027       <-- ACCGACTTGCTCTGACAGAGTGATTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. landra
FD563499       <-- ACCGACTTGCTCTGACAGAGTGATTTGGCTTTCTCGACAACCTTAACAGC  Raphanus sativus var. oleiformis
EX757802       <-- ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- ACCGACTTGCTCTGACAGAGTGATTTGGCTTT-TCGACAACCTTAACAGC  Raphanus sativus var. oleiformis
EV572992       --> ACCGACTTGCTCTGACAGAGTGATTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. landra
FD567125       --> ACCGACTTGCTCTGACAGAGTGATTTGGCTTTCTCGACAACCTTAACAGC  Raphanus sativus var. oleiformis
EV541126       --> ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> ACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN17317        --> GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus raphanistrum subsp. maritimus
EV568211       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus raphanistrum subsp. landra
EV570027       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus raphanistrum subsp. landra
FD563499       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus sativus var. oleiformis
EX757802       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTTCCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTTCCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus sativus var. oleiformis
EV572992       --> GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus raphanistrum subsp. landra
FD567125       --> GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTACCGG  Raphanus sativus var. oleiformis
EV541126       --> GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTTCCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> GGTATGCTTCAAATCAGCATCAACATAAGGCACAACCTCCGCAGTTCCGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN17317        --> GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EV568211       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EV570027       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
FD563499       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EX757802       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
FD946358       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EV536756       <-- GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EX887524       <-- GGCCAGCGAGACCA-CGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EV572992       --> GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
FD567125       --> GGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATG
EV541126       --> GGCCAGCGAGACCAACGGCGGAAACGGCGTTAGGTTTGGCGTGGACGATG
EX761294       --> GGCCAGCGAGACCAACGGCGGAAACGGCGTTAGGTTTGGCGTGGACGATG

               601    -    651
UN17317        --> ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCc..  Raphanus raphanistrum subsp. maritimus
EV568211       <-- ATGAGCTTGAAAGGGGAGTTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. landra
EV570027       <-- ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. landra
FD563499       <-- ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus sativus var. oleiformis
EX757802       <-- ATGAGCTTGAAAGGGAAATTGGGGGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- ATGAGCTTGAAAGGGAAATTGGGGGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus sativus var. oleiformis
EV572992       --> ATGAGCTTGAAAGGGGAGTTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. landra
FD567125       --> ATGAGCTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus sativus var. oleiformis
EV541126       --> ATGAGCTTGAAAGGGAAATTGGGGGCGTAGGGAGCGAAGAAACGATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> ATGAGCTTGAAAGGGAAATTGGGGGCGTAGGGAGCGAAAAAACGATCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17317        --> AGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV568211       <-- AGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. landra
EV570027       <-- AGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. landra
FD563499       <-- AGTCCACTCTATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus sativus var. oleiformis
EX757802       <-- AGTCCACTCCAACGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- AGTCCACTCCATTGCGTAGGTGCTCTGCTCGCTTTCGTCCACACCCACTA  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- AGTCCACTCCAACGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- AGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus sativus var. oleiformis
EV572992       --> AGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. landra
FD567125       --> AGTCCACTCTATTGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus sativus var. oleiformis
EV541126       --> AGTCCACTCCAACGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> AGTCCACTCCAACGCGTAGGTGCTCTGCTCACTTTCGTCCACACCAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN17317        --> CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV568211       <-- CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus raphanistrum subsp. landra
EV570027       <-- CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus raphanistrum subsp. landra
FD563499       <-- CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus sativus var. oleiformis
EX757802       <-- CCATCACTGGTTTCTCCTCTCCGGTAGC......................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946358       <-- CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus sativus cv Early Scarlet Globe
EV536756       <-- CCATCACTGGTTTCTCCTCTCCGGTAGCCATCACTCtctcaactatccga  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887524       <-- CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGTGCTGATCT  Raphanus sativus var. oleiformis
EV572992       --> CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus raphanistrum subsp. landra
FD567125       --> CCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCT  Raphanus sativus var. oleiformis
EV541126       --> CCATCACTGGTTTCTCCTCTCCGGTAGCCATCACTCtctcaactatccga  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761294       --> CCATCACTGGTTTCTCCTCTCCGGTAGCCATCACTCtctcaact......  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN17317        --> GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ..................................................
EV568211       <-- GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
EV570027       <-- GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
FD563499       <-- Gc................................................
EX757802       <-- ..................................................
FD946358       <-- GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
EV536756       <-- aggcgctgatctcc....................................
EX887524       <-- GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
EV572992       --> GTTGCCCTCGCTTAGAAGATCCTAGAATGTGAGCACAGAAACCAATGCTT
FD567125       --> Gc................................................
EV541126       --> aggcgctgatctcc....................................
EX761294       --> ..................................................

               801    -    851
UN17317        --> TCTCCCCCCCCGTAGATCCAGAATACAAACAAGTATTATTGATGACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD962355       <-- ..................................................
EV568211       <-- TCTCCCCCCCCGTAGATCC...............................
EV570027       <-- TCTCCCCCCCCGTAGATAGAGAATACAAACAAGTATTATTGATGACAAAA
FD563499       <-- ..................................................
EX757802       <-- ..................................................
FD946358       <-- TCTCCCCCCC-GTAGATAGAGAATAAAAA.....................
EV536756       <-- ..................................................
EX887524       <-- TCTCCCCCCC-GTAGATag...............................
EV572992       --> TCTCCCCCCCCGTAGATCC...............................
FD567125       --> ..................................................
EV541126       --> ..................................................
EX761294       --> ..................................................

               851    -    901
UN17317        --> GGAAGTATCTGTGTACCC
                   ~~~~~~~~~~~~~~~~~~
FD962355       <-- ..................
EV568211       <-- ..................
EV570027       <-- GGAAGTATCTGTGTACCC
FD563499       <-- ..................
EX757802       <-- ..................
FD946358       <-- ..................
EV536756       <-- ..................
EX887524       <-- ..................
EV572992       --> ..................
FD567125       --> ..................
EV541126       --> ..................
EX761294       --> ..................