1      -     51
UN17318        --> GCCTAAAAACAGAAATAGTATAACTCAAATCTTTCGGCATTCAAGATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750238       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> GCCTAAAAACAGAAATAGTATAACTCAAATCTTTCGGCATTCGAGATTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> gtCTAGAAACAGAAATAGTATAACTCAAATCTTTCGGCATTCAAGATTGC  Raphanus raphanistrum subsp. maritimus
EX753756       --> ..CTAGAAACAGAAATAGTATAACTCAAATCTTTCGGCATTCAAGATTGC  Raphanus raphanistrum subsp. maritimus
EX899651       --> gtCTAGAAACAGAAATAGTATAACTCAAATCTTTCGGCATTCAAGATTGC  Raphanus sativus cv Early Scarlet Globe
EY912514       --> .............AATAGTATAACTCAAATCTATCGGCATTCGAGATTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> ......................gCTCAAATCTTTCGGCATTCAAGATTGC  Raphanus raphanistrum subsp. landra
FD952705       --> .......................CTCAAATCTTTCGGCATTCGAGATTGC  Raphanus sativus cv Rat-Tail Radish #3870

               51     -    101
UN17318        --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..............AAGCTAAGAAACAACGAACCGGTCAAGGCATGGACC
FD945822       <-- .......................AATAACGAACCG-TCAAGGCATGGACC
EV526394       <-- ..................................................
EX750238       <-- ..................................................
EX895596       <-- ..................................................
FD956917       <-- ..................................................
FD966085       <-- ..................................................
EY916916       <-- ..................................................
FD547404       --> AAGACCAAACCGAAAAGGTAAAAAACAACGAACCGGTCAAGGCATGGACC
EV530882       --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC
EX753756       --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC
EX899651       --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC
EY912514       --> AAGACCAAACCGAAAAGCTAACAAATAACAAACCGGTCAAGGCATGGACC
FD554422       --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC
FD952705       --> AAGACCAAACCGAAAAGCTAACAAATAACGAACCGGTCAAGGCATGGACC

               101    -    151
UN17318        --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTACAGAAACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- AAAATACCGATACATAATAACCGATATGAA-ATGCCGGTACAGAAACTAC
FD945822       <-- AAA-TACCGATACATAATAACCGATATGAA-TTGCCGG---TAAAACTAC
EV526394       <-- ..................................................
EX750238       <-- ..................................................
EX895596       <-- ..................................................
FD956917       <-- ..................................................
FD966085       <-- ..................................................
EY916916       <-- ..................................................
FD547404       --> AAAATACCGATACATAATAACCGATATGAAATTGCCGGTACAGAAACTAC
EV530882       --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTACAGAAACTAC
EX753756       --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTACAGAAACTAC
EX899651       --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTA---AAACTAC
EY912514       --> AAAATACCGATACATAATAACCGAAATGAAATTGCCGGTACAAAAACTAC
FD554422       --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTACAGAAACTAC
FD952705       --> AAAATACCGATACATAATAACCGATATGAA-TTGCCGGTA---AAACTAC

               151    -    201
UN17318        --> ATGCGGAATTTCATGGAACTTTCTCCCTT-ATGATCTAGTTTCTTATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ATGCGGAATTTCATGGAACTTTCTCCCTT-ATGATCTAGTTTCTTATTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- ATGCGGAATTTCATGGAACTTTCTCCCTTTATGATCTAGTTTCTTATTTG  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750238       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> ATGCGGAATTTCATGGAACTTTCTCCCTT-ATGATCTAGTTTCTTATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> ATGCGGAACTTCTTGGAACCGTCTCCCTT-ATGATCTAGTTTCTTATTTG  Raphanus raphanistrum subsp. maritimus
EX753756       --> ATGCGGAACTTCTTGGAACCGTCTCCCTT-ATGATTTAGTTTCTTATTTG  Raphanus raphanistrum subsp. maritimus
EX899651       --> ATGCGGAATTTCATGGAACTTTCTCCCTTTATGATCTAGTTTCTTATTTG  Raphanus sativus cv Early Scarlet Globe
EY912514       --> ATGCGGAATTTCATGGAACTGTCTCCCTT--TGATCTAGTTTCTTATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> ATGCGGAACTTCTTGGAACCGTCTCCCCT-ATGATCTAGTTTCTTATTTG  Raphanus raphanistrum subsp. landra
FD952705       --> ATGCGGAATTTCATGGAACTTTCTCCCTTTATGATCTAGTTTCTTATTTG  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN17318        --> AAGACATAGTTGTCTCTTTAACGATTAATGGGAGTATGCATACGCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- AAGACATAGTTGTCACTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- AAGACATAGTTGTCTCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750238       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> AAGACATAGTTGTCACTTTAACGACTAATGGGAGTATGCATACGCTCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> AAGACATAGCTGTCGCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus raphanistrum subsp. maritimus
EX753756       --> AAGACATAGCTGTCGCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus raphanistrum subsp. maritimus
EX899651       --> AAGACATAGTTGTCTCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus sativus cv Early Scarlet Globe
EY912514       --> AAAACATAGTTGTCTCTTTAACGATTAATGGGAGTATGCATACCCTCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> AAGACATAGCTGTCGCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus raphanistrum subsp. landra
FD952705       --> AAGACATAGTTGTCTCTTTAACGATTAATGGGAGTATGCATACGCTCAAC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN17318        --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
FD945822       <-- GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
EV526394       <-- ..................................................
EX750238       <-- ..................................................
EX895596       <-- ..................................................
FD956917       <-- ..................................................
FD966085       <-- ..................................................
EY916916       <-- ..................................................
FD547404       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
EV530882       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
EX753756       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
EX899651       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
EY912514       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAACAAAA
FD554422       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA
FD952705       --> GATCTTATTCACAGCATCACGGGACATCACAAGCGTGTCGTGGAGCAAAA

               301    -    351
UN17318        --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- TGCTGTAAACGTCAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
FD945822       <-- TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
EV526394       <-- ..................................................
EX750238       <-- ..................................................
EX895596       <-- ..................................................
FD956917       <-- ..................................................
FD966085       <-- ..................................................
EY916916       <-- ..................................................
FD547404       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAAA
EV530882       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
EX753756       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAAA
EX899651       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
EY912514       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAAA
FD554422       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA
FD952705       --> TGCTGTAAACGTTAAGCCCTATTGATGGAAGTATGTTGACATAGTGAAGA

               351    -    401
UN17318        --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAAC
FD945822       <-- TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAGC
EV526394       <-- ...........................................CTACAAC
EX750238       <-- ..................................................
EX895596       <-- ..................................................
FD956917       <-- ..................................................
FD966085       <-- ..................................................
EY916916       <-- ..................................................
FD547404       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAAC
EV530882       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGGCCGCCTTCTACAAC
EX753756       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGGCCCCCTTCTACAAC
EX899651       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAGC
EY912514       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAAC
FD554422       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGGCCGCCTTCTACAAC
FD952705       --> TTCTGGGTGGCTAGCTTCAGCTTCTCATCGATAGGACCGCCTTCTACAGC

               401    -    451
UN17318        --> GAGCACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- GAGCACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- GAGCACTTTCTTTGTGTTCTCCATTTGATTGTAAGAGTTCACAATGTTCT  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- GAGGACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. maritimus
EX750238       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> GAGCACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> GAGGACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. maritimus
EX753756       --> GAGGACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. maritimus
EX899651       --> GAGCACTTTCTTTGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus sativus cv Early Scarlet Globe
EY912514       --> GAGCACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> GAGGACTTTCTTCGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus raphanistrum subsp. landra
FD952705       --> GAGCACTTTCTTTGTGTTCTCCATTTGATTGTAATAGTTCACAATGTTCT  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN17318        --> TTGTTTTGTGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- TTGTTTTGTGCGCTGGCAATGCCAAATCAAAAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- TTGTTTTGTGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- TTGTTTTATGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCTT  Raphanus raphanistrum subsp. maritimus
EX750238       <-- ......................................AGGAGTT--TCT  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> TTGTTTTGTGCGTAGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> TTGTTTTATGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. maritimus
EX753756       --> TTGTTTTATGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. maritimus
EX899651       --> TTGTTTTGTGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus sativus cv Early Scarlet Globe
EY912514       --> TTGTTTTGTGCGTAGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> TTGTTTTATGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus raphanistrum subsp. landra
FD952705       --> TTGTTTTGTGCGTTGGCAATGCCAAATCATCAAACACGAGGAGTTTTCCT  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN17318        --> TCTGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- TCTACGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- TCTGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- TCTGCGGCTCTAGCTGTTAGTGCTATCTTCAGGCCAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. maritimus
EX750238       <-- TCTGCGGCTCTAGCTGTTAGTGCTATCTTCAGGCTAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. maritimus
EX895596       <-- ..TGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- ..TGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- ................ttAGTGCTATCTCCAGGCCAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> TCTGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGT...........  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> TCTGCGGCTCTAGCTGTTAGTGCTATCTTCAGGCCAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. maritimus
EX753756       --> TCTGCGGCTCTAGCTGTTAGTGCTATCTTCAGGCTAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. maritimus
EX899651       --> TCTGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus sativus cv Early Scarlet Globe
EY912514       --> TCTGCGGCTCTAGCTGTGAGTGCTATCTT.....................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> TCTGCGGCTCTAGCTGTTAGTGCTATCTTCAGGCCAAGTCTTCGAACCTG  Raphanus raphanistrum subsp. landra
FD952705       --> TCTGCGGCTCTAGCTGTGAGTGCTATCTTCAGACCAAGTCTTCGAACCTG  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN17318        --> CTTATTCATCTTTATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- CTTATTCATCTTTATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- CTTATTCATCTTAATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- CTTATTCATCTTTATCGCATGGCTTCTTGGTTTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. maritimus
EX750238       <-- CTTATTCATCTTTATCGCATGGCTTCTTGGTTTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. maritimus
EX895596       <-- CTTATTCATCTTAATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- CTTATTCATCTTAATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- CTTATTCATCTTTATCGCATGGCTTCTTGGTTTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. maritimus
EY916916       <-- ..TATTCATCTTTATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> CTTATTCATCTTTATCGCATGGCTTCTTGGTTTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. maritimus
EX753756       --> CTTATTCATCTTTATCGCATGGCTTCTTGGTTTGGGCCCATGCATCACAC  Raphanus raphanistrum subsp. maritimus
EX899651       --> CTTATTCATCTTAATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus sativus cv Early Scarlet Globe
EY912514       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> CTTATTCATCTTTATCGCACGGCTTCTTGGTTTGGGACCATGCATCACAC  Raphanus raphanistrum subsp. landra
FD952705       --> CTTATTCATCTTAATCGCATGGCTTCTTGGTCTGGGCCCATGCATCACAC  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN17318        --> AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCTCGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCTCTACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945822       <-- AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCCCGACCT  Raphanus sativus cv Early Scarlet Globe
EV526394       <-- AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. maritimus
EX750238       <-- AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. maritimus
EX895596       <-- AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCCCGACCT  Raphanus sativus cv Early Scarlet Globe
FD956917       <-- AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCCCGACCT  Raphanus sativus cv Rat-Tail Radish #3870
FD966085       <-- AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. maritimus
EY916916       <-- AACCACCTCGGAA--CAGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547404       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV530882       --> AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. maritimus
EX753756       --> AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCT......  Raphanus raphanistrum subsp. maritimus
EX899651       --> AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCCCGACCT  Raphanus sativus cv Early Scarlet Globe
EY912514       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554422       --> AACCACCTCGGAACTGCGGGCCACGGAGTGTACCATGTCTAGCTCGACCT  Raphanus raphanistrum subsp. landra
FD952705       --> AACCACCTCGGAACTGAGGGCCACGGAGTGTACCATGTCTAGCCCGACCT  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN17318        --> GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
FD945822       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCCCACTTAT
EV526394       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
EX750238       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
EX895596       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
FD956917       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
FD966085       <-- GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
EY916916       <-- GTACCTTTCTGGTTCCATGGCTTTCTACCGGTTCCGCTAACCTCACTTAT
FD547404       --> ..................................................
EV530882       --> GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
EX753756       --> ..................................................
EX899651       --> GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
EY912514       --> ..................................................
FD554422       --> GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT
FD952705       --> GTACCTTTCTGGTTCCATGGCTTTCGACCAGTTCCGCTAACCTCACTTAT

               701    -    751
UN17318        --> TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCTGA
FD945822       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
EV526394       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
EX750238       <-- GGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCTGA
EX895596       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
FD956917       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
FD966085       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
EY916916       <-- TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCTGA
FD547404       --> ..................................................
EV530882       --> TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
EX753756       --> ..................................................
EX899651       --> TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA
EY912514       --> ..................................................
FD554422       --> TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTG................
FD952705       --> TGTTTTGGTCGAGTGAGTTCCCTGCTGGCGTTTGGCAAGCTGCCATCGGA

               751    -    801
UN17318        --> CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- CGACGTGATGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
FD945822       <-- CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
EV526394       <-- CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCGAAGACATCACCA
EX750238       <-- CGACGTGGTGAATGATATCTTTCCTGAGAGGAACATCAAAGACATCACCA
EX895596       <-- CAACGTGGTGAATGATACCTTTCCTGACAGGAACATCAAAGACATCACCA
FD956917       <-- CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
FD966085       <-- CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
EY916916       <-- CAACGTGGTGAATGATATCTTTCCTGACAGGAACATCAAAGACATCACCA
FD547404       --> ..................................................
EV530882       --> CAACGTGGTGAATGATATCTTTCCTGACAGGAACATC.............
EX753756       --> ..................................................
EX899651       --> CAACGTGGTGAATGATACCTTTCCTGACAGGAACATCAA-GACATCACCA
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> CAACGTGGTGAATGATATCTTTCCTG........................

               801    -    851
UN17318        --> GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- GCTAAAACCATGAAACCCTTGTCCTCGc......................
FD945822       <-- GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
EV526394       <-- GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
EX750238       <-- GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAATTTGTCACCGGAAT
EX895596       <-- GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
FD956917       <-- ACTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
FD966085       <-- GCTAAAACCATGAAACCCTTGTCTTCGTTCTGAAAGTTTGTCACCGGAAT
EY916916       <-- GCTAAAACCATGAAACCCTTGTCCTCGTTCTGAAAATTAGTCACCGGAAT
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> GCTAAA-CCATGAAACCCT...............................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               851    -    901
UN17318        --> GACCAAGTCTTGATATTGTCCTATGTTTCGGTCTGGAGTAATGACGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- GACCAAGTCTTGATATTGTCCTATGc........................
EV526394       <-- GACCAAGTCTTGATATTGTCCTATGTTTCGGTCTGGAGTAATGACGGTCT
EX750238       <-- GACCAAGTCTTGATATTGTCCTATGTTTCGGTCTGGAGTAAGGACGGTCT
EX895596       <-- GACCAAGTCTTGATATTGTCCTATGGTTCGGTCTGGTGTGATGACGGTCT
FD956917       <-- GACCAAGTCTTGATATTGTCCTATGGTTCGGTCTGGTGTAATGACGGTCT
FD966085       <-- GACCAAGTCTTGATATTGTCCTATGTTTCGGTCTGGAGTAATGACGGTCT
EY916916       <-- GACCAAGTCTTGATATTGTCCTATGGTTCGGTCTGGAGTAATGACGGTCT
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               901    -    951
UN17318        --> TTTGGGAAAGTAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- TTTGGGACAGTAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
EX750238       <-- TTTGGGAAAGCAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
EX895596       <-- TTTGGGAAAGTAAATCATGAAGAAATGAATCATCAGGAGTCAAAATAGAA
FD956917       <-- TTTGGGAAAGTAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
FD966085       <-- TTTGGGACAGTAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
EY916916       <-- TTTGGGAAAGTAAATCATGAGGAAATGAATCATCAGGAGTCAAAATAGAA
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               951    -   1001
UN17318        --> GTGGAGAGCTTTCGGTTCGAAAGTAAACCCATTCCACACTTGAGATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- GTGGAGAGCTTTCGGTTCGAAAGTAAACCCATTCCACACTTGAGATGAT-
EX750238       <-- GTGGAGAGCTTTCGGTTCGAAAGTAAACCCATTCCACACTTGAGATGAT-
EX895596       <-- GTGGAGAGCTTTCGGTTCGAAAGTAAACCCACTCCACACTTGAGATGATG
FD956917       <-- GTGGAGAGCTTTCGGTTCGAAAGTAAACCCACTCCACACTTGAGATGATG
FD966085       <-- GTGGAGAGCTTTCGGTTCGAAAGTAAACCCATTCCACACTTGAGATGAT-
EY916916       <-- GTGGGGAGCTTTCGGTTCGAAAGTAAACCCACTCCACACTTGAGATGAT-
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               1001   -   1051
UN17318        --> ATGACTAGGAAGAGAGCTTAAACCATTTCCAGATGCATTCGTCGTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- --GACTAGGAAGAGAGCTTAAACCATTTCCAGATGCATTCGTCGTGTAGC
EX750238       <-- --GACTAGGAAGAGAGCTTAAACCATTTCCAGATGCATTCGTCGTGTAGC
EX895596       <-- ATGACTAGGAAGAGAGCTTAAACTATTTCCAGATGCATTCGTCGTGTAGC
FD956917       <-- ATGACTAGGAAGAGAGCTTAAACTATTTCCAGATGCATTCGTCGTGTAGC
FD966085       <-- --GACTAGGAAGAGAGCTTAAACCACTTCCAGATGCATTCGTCGTGTAGC
EY916916       <-- --GACTAGGAAGAGAGCTTAAACCATTTCCAGATGCATTCGTCGTGTTGC
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               1051   -   1101
UN17318        --> TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
EX750238       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
EX895596       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
FD956917       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
FD966085       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
EY916916       <-- TGCTGCGTCCTAAAGCTGTGAAAGATCCAAAAGTGCGAAGAACTCTTCTT
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               1101   -   1151
UN17318        --> GAGAGTGAAGCAGCCATATCCTTTGAGTCAAAACCCTAAATGCTCATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAACCCCTAAATGCTCATCGG
EX750238       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAAACCCTAAATGCTCATCGG
EX895596       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAAACCCTAAATGCTCATCGG
FD956917       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAAACCCTAAATGCTCATCGG
FD966085       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAACCCCTAAATGCTCATCGG
EY916916       <-- GAGAGTGAAGCAGCCATATCCTTTGAGTCAAAACCCTAAATGCTCATCGG
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               1151   -   1201
UN17318        --> TCAGAGGAGCGGCGGTGAAGAAGACGAAGAAGTAAAACGGCGACTATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908136       <-- ..................................................
FD945822       <-- ..................................................
EV526394       <-- TCAGAGGAGCGGCGGTGAAGAAGACGAAGAAGTAAAACGGCGACcc....
EX750238       <-- TCAGAGGAGCGGCGGTGAAGAAGACGAAGAAGTAAAACGGCGACcc....
EX895596       <-- TCAGAGGAGCGGCGGTGAAGAAGACcc.......................
FD956917       <-- TCAGAGGAGCGGCGGTGAAGAAGACGAAAAAGTAAAACGGCGACTATCAA
FD966085       <-- TCAGAGGAGCGGCGGTGAAGAAGACGAAGAAGTAAAACGGCGACTc....
EY916916       <-- TCAGAGGAGCGGCGGTGAAGAAGACcc.......................
FD547404       --> ..................................................
EV530882       --> ..................................................
EX753756       --> ..................................................
EX899651       --> ..................................................
EY912514       --> ..................................................
FD554422       --> ..................................................
FD952705       --> ..................................................

               1201   -   1251
UN17318        --> AGGTTTTAAGAGACTCC
                   ~~~~~~~~~~~~~~~~~
EY908136       <-- .................
FD945822       <-- .................
EV526394       <-- .................
EX750238       <-- .................
EX895596       <-- .................
FD956917       <-- AGGTTTTAAGAGACTCC
FD966085       <-- .................
EY916916       <-- .................
FD547404       --> .................
EV530882       --> .................
EX753756       --> .................
EX899651       --> .................
EY912514       --> .................
FD554422       --> .................
FD952705       --> .................