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Alignment for radish unigene UN17361

               1      -     51
UN17361        --> GGGTGTACAGTGTAATCGTACCAGCACCACCCAATATAATCGAGCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ..................................................
EV539657       <-- ..................................................
EX760204       <-- ..................................................
EX753035       <-- ..................................................
EW739078       <-- ..................................................
FD555460       <-- ..................................................
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> GGGTGTACAGTGTAATCGTACCAGCACCACCCAATATAATCGAGCTGCAA
EY914418       --> ..................................................
EY901136       --> ..................................................
EX749306       --> ..................................................
EY898863       --> ..................................................
FD559819       --> ..................................................
EW734809       --> ..................................................
EY929233       --> ..................................................
FD938366       --> ..................................................
FY443425       --> ..................................................
EV534839       --> ..................................................

               51     -    101
UN17361        --> TAATTTTTTTATTATATATATTCATTCATTCCTCTGTATCACCGACCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ...............ggATATTCATTCATTCCTCTGTATCACCCCCCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539657       <-- .............................................ggATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760204       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753035       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW739078       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD555460       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD537758       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581553       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY894801       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX763735       --> TAATTTTTTTATTATATATATTCATTCATTCCTCTGTACCACC-ACCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914418       --> ...............ggATATTCATTCATTCCTCTGTATCACC-ACCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901136       --> .................ggATTCATCCATTCCTCTGTATCACC-ACCATA  Raphanus raphanistrum subsp. maritimus
EX749306       --> ...........................................GACCATA  Raphanus raphanistrum subsp. maritimus
EY898863       --> ..........................................gGACCATA  Raphanus raphanistrum subsp. maritimus
FD559819       --> ..........................................gGACCATA  Raphanus raphanistrum subsp. landra
EW734809       --> .............................................ggATA  Raphanus sativus cv Rat-Tail Radish #3870
EY929233       --> ....................................ggaccataagatTA  Raphanus sativus var. oleiformis
FD938366       --> ......................................ggcataagatTA  Raphanus sativus var. oleiformis
FY443425       --> ..................................................  Raphanus sativus cv GSK3-1
EV534839       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN17361        --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EV539657       <-- AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EX760204       <-- ...ttttgattgaaaaagttaattcagAAAAGGAGGATTCTTTACTACTA
EX753035       <-- ......................................TCTTTACTACTA
EW739078       <-- ..............................................ACTA
FD555460       <-- ..................................................
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EY914418       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EY901136       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EX749306       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EY898863       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
FD559819       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EW734809       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
EY929233       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
FD938366       --> AGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTA
FY443425       --> ...............TCTTTTGATTGAAAA-GGAGGATTCTTTACTACTA
EV534839       --> ..................................................

               151    -    201
UN17361        --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EV539657       <-- CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EX760204       <-- CTCTCTACAGATTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EX753035       <-- CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EW739078       <-- CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
FD555460       <-- ..................................................
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EY914418       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EY901136       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EX749306       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EY898863       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
FD559819       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EW734809       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EY929233       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
FD938366       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
FY443425       --> CTCTCTACAGACTTGATCATATGGAAGATCCAAAGGAGAACAAGAACTCG
EV534839       --> ...................TATGGAAG-GCCAAAGGAGAACAAGAACTCG

               201    -    251
UN17361        --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EV539657       <-- CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EX760204       <-- CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EX753035       <-- CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EW739078       <-- CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
FD555460       <-- .........................................AGGAGGAAC
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EY914418       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EY901136       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EX749306       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EY898863       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
FD559819       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EW734809       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EY929233       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
FD938366       --> CCATGGTTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
FY443425       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC
EV534839       --> CCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAAC

               251    -    301
UN17361        --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EV539657       <-- CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGCGGAAAC
EX760204       <-- CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGCGGAAAC
EX753035       <-- CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EW739078       <-- CATTCCTGATTACTCTATGGATTTCTCTAAAATCAGAGAGATGAGGAAAC
FD555460       <-- CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGTGGAAAC
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EY914418       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EY901136       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EX749306       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EY898863       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
FD559819       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGTGGAAAC
EW734809       --> CATTCCTGATTACTCTATGGATTTCTCTAAAATCAGAGAGATGAGGAAAC
EY929233       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
FD938366       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
FY443425       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGAGGAAAC
EV534839       --> CATTCCTGATTACTCTATGGATTTCTCTAAGATCAGAGAGATGCGGAAAC

               301    -    351
UN17361        --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539657       <-- AGAACAAGAG........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760204       <-- AGAACAAGAGAGATCCTTCTCGTGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753035       <-- AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. maritimus
EW739078       <-- AGAACAAGAGAGATCCTTCTCGTGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD555460       <-- AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus raphanistrum subsp. landra
FD537758       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581553       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY894801       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX763735       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914418       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901136       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTCGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. maritimus
EX749306       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. maritimus
EY898863       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. maritimus
FD559819       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus raphanistrum subsp. landra
EW734809       --> AGAACAAGAGAGATCCTTCTCGTGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY929233       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus sativus var. oleiformis
FD938366       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus sativus var. oleiformis
FY443425       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC  Raphanus sativus cv GSK3-1
EV534839       --> AGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGATGAAGAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN17361        --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EV539657       <-- ..................................................
EX760204       <-- GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTGAGCCTAA
EX753035       <-- GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EW739078       <-- GTTAATCCTTTTCATAATCAACCTACTTCGGTT------GATAAGCCTAA
FD555460       <-- GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
FD537758       <-- ..................................................
FD581553       <-- ..................................................
EY894801       <-- ..................................................
EX763735       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EY914418       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EY901136       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EX749306       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EY898863       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
FD559819       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
EW734809       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAA------GCCTAA
EY929233       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
FD938366       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA
FY443425       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAA------GCCTAA
EV534839       --> GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAA

               401    -    451
UN17361        --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760204       <-- GCTCACCACTGTTCACGGTGACAACAACAACAACAACAAAACCCACAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753035       <-- GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. maritimus
EW739078       <-- GCTCACCACTGTTCACATTGACAACAACAACAA------AACCCACAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD555460       <-- GCTCACCACTGTTCACAGTGACAACAACAACAA------AACCCGCAATG  Raphanus raphanistrum subsp. landra
FD537758       <-- ..............................CAA------AACCCACAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581553       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY894801       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX763735       --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914418       --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901136       --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCTACAATG  Raphanus raphanistrum subsp. maritimus
EX749306       --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. maritimus
EY898863       --> GCTCACCACCGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus raphanistrum subsp. maritimus
FD559819       --> GCTCACCACTGTTCACAGTGACAACAACAACAA------AACCCGCAATG  Raphanus raphanistrum subsp. landra
EW734809       --> GCTCACCACTGTTCACATTGACAACAACAACAA------AACCCACAATG  Raphanus sativus cv Rat-Tail Radish #3870
EY929233       --> GCTCACCACCGTTCACAGTGACAACAACAA---------AACCCATAATG  Raphanus sativus var. oleiformis
FD938366       --> GCTCACCACCGTTCACAGTGACAACAACAA---------AACCCATAATG  Raphanus sativus var. oleiformis
FY443425       --> GCTCACCACTGTTCACAGTGACAACAACAACAA------AACCCACAATG  Raphanus sativus cv GSK3-1
EV534839       --> GCTCACCACCGTTCACAGTGACAACAACAA---------AACCCATAATG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN17361        --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EV539657       <-- ..................................................
EX760204       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATTTGCGAGGAGAGGAATCTTC
EX753035       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATTTGCGAGGAGAGGAATCTTC
EW739078       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FD555460       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FD537758       <-- ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FD581553       <-- .....................................GAGAGGAATCTTC
EY894801       <-- ..................................................
EX763735       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EY914418       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EY901136       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EX749306       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EY898863       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FD559819       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EW734809       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EY929233       --> AGTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FD938366       --> AGTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
FY443425       --> ACTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTC
EV534839       --> AGTTCTCTCATCACCAGCCACTTTCTCCGTCTGCGAGGAGAGGAATCTTC

               501    -    551
UN17361        --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EV539657       <-- ..................................................
EX760204       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAT
EX753035       <-- AGCTGCTTCAATTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EW739078       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
FD555460       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
FD537758       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
FD581553       <-- AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EY894801       <-- .............................AAGGTGTTTCTTATCATAGAG
EX763735       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EY914418       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EY901136       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EX749306       --> AGCTGCTTCAATTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EY898863       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
FD559819       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EW734809       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EY929233       --> AGCTGCTTCAACTGCTGCGTTAGGGCTTGAAGGTGTATCTTATCATAGAG
FD938366       --> AGCTGCTTCAACTGCTGCGTTAGAGCTTGAAGGTGCATCTTATCATAGAG
FY443425       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG
EV534839       --> AGCTGCTTCAACTGCTGCGTTAAAGCTTGAAGGTGTATCTTATCATAGAG

               551    -    601
UN17361        --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EV539657       <-- ..................................................
EX760204       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EX753035       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EW739078       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FD555460       <-- ACCGATGAGAGGAAATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FD537758       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FD581553       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EY894801       <-- ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EX763735       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EY914418       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EY901136       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EX749306       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EY898863       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FD559819       --> ACCGATGAGAGGAAATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EW734809       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EY929233       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FD938366       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
FY443425       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT
EV534839       --> ACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAAT

               601    -    651
UN17361        --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAA-TGGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539657       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760204       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753035       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. maritimus
EW739078       <-- AATAATAGTAGTGATG---ATTCCAAGACAGAAATGAAAAAA-TGGCAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD555460       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAAATGGCAGT  Raphanus raphanistrum subsp. landra
FD537758       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD581553       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAAATGGCAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY894801       <-- AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCGGT  Raphanus raphanistrum subsp. maritimus
EX763735       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914418       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901136       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. maritimus
EX749306       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCAGT  Raphanus raphanistrum subsp. maritimus
EY898863       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATTAAAAAA-TGGCGGT  Raphanus raphanistrum subsp. maritimus
FD559819       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAAATGGCAGT  Raphanus raphanistrum subsp. landra
EW734809       --> AATAATAGTAGTGATGAT---TCCAAGACAG-AATGAAAAAA-TGGCAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY929233       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAA-TGGCAGT  Raphanus sativus var. oleiformis
FD938366       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAA-TGGCAGT  Raphanus sativus var. oleiformis
FY443425       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAAATGGCAGT  Raphanus sativus cv GSK3-1
EV534839       --> AATAATAGTAGTGATGATGATTTCAAGACAGAAATGAAAAAAATGGCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17361        --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EV539657       <-- ..................................................
EX760204       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTTTGCTGT
EX753035       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EW739078       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTCTGTCTGCTGT
FD555460       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
FD537758       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
FD581553       <-- GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTCTGTCTGCTGT
EY894801       <-- GGGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EX763735       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EY914418       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTGTGTCTGCTGT
EY901136       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EX749306       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EY898863       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
FD559819       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAAT................
EW734809       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTCTGTCTGCTGT
EY929233       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
FD938366       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
FY443425       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT
EV534839       --> GTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGT

               701    -    751
UN17361        --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EV539657       <-- ..................................................
EX760204       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EX753035       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EW739078       <-- TTTACCGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FD555460       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FD537758       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FD581553       <-- TT-ACCGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EY894801       <-- TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EX763735       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EY914418       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EY901136       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EX749306       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EY898863       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FD559819       --> ..................................................
EW734809       --> TTTACCGTTATCTTAAACTGTCTAACAATATGATGTTTTTGG........
EY929233       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FD938366       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
FY443425       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG
EV534839       --> TT-ACTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTG

               751    -    801
UN17361        --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EV539657       <-- ..................................................
EX760204       <-- AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EX753035       <-- AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EW739078       <-- AAATGTAGTTAGCTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
FD555460       <-- AAGTGTAGTTAGTTTTCTTTCc............................
FD537758       <-- AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
FD581553       <-- AAGTGTAGTTAGCTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EY894801       <-- AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EX763735       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AG.......
EY914418       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EY901136       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EX749306       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
EY898863       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
FD559819       --> ..................................................
EW734809       --> ..................................................
EY929233       --> AAGTGTAGTTAGTTTTCTT...............................
FD938366       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT-AGTTTGGTT
FY443425       --> AAGTGTAGTTAGTTTTC.................................
EV534839       --> AAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTTTAGTTTGGTT

               801    -    851
UN17361        --> TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- TAGAAATTGGTGAAGTTTCAATATTGTGT.....................
EV539657       <-- ..................................................
EX760204       <-- T.................................................
EX753035       <-- TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGGTATG
EW739078       <-- TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGATATG
FD555460       <-- ..................................................
FD537758       <-- TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCGTAGCAGATATG
FD581553       <-- TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGATATG
EY894801       <-- TAGAAATTGGTGAAGTTTCAAT............................
EX763735       --> ..................................................
EY914418       --> TAGAAATTGGTGAAGTTTCA-TATTGTGT.....................
EY901136       --> TAGAAATTGGTGAAGTTTCA-TATTGTGTAATG.................
EX749306       --> TAGAAATTGGTGAAGTTTCA-TATTGTGTA-TGCCATCATAGCAG-TATG
EY898863       --> TAGAAATTGGTGAAGT..................................
FD559819       --> ..................................................
EW734809       --> ..................................................
EY929233       --> ..................................................
FD938366       --> TAGAAATTGGTGAAGTTTCAA.............................
FY443425       --> ..................................................
EV534839       --> TAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGATATG

               851    -    901
UN17361        --> TGATACATTACTACGATGCATTTAGATTATAAA-GTAAAATATTGTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ..................................................
EV539657       <-- ..................................................
EX760204       <-- ..................................................
EX753035       <-- TGATACATTACAACGATGCATTTAGATTATAAAAGTAAAATATTGTGTTT
EW739078       <-- TGATACATTACTACGATGCATTTAGATTATAAAagc..............
FD555460       <-- ..................................................
FD537758       <-- TGATACATTACTACGATGCA..............................
FD581553       <-- TGATACATTACTACGATGC...............................
EY894801       <-- ..................................................
EX763735       --> ..................................................
EY914418       --> ..................................................
EY901136       --> ..................................................
EX749306       --> TGATACATTACAACGATGCATT-AGA-TATAAA-GTAAAATATTGTGT..
EY898863       --> ..................................................
FD559819       --> ..................................................
EW734809       --> ..................................................
EY929233       --> ..................................................
FD938366       --> ..................................................
FY443425       --> ..................................................
EV534839       --> TGATACATTACTACGATGCATTTAGATTATAAA-GTAAAATATTGTGTTT

               901    -    951
UN17361        --> TCCATTTAACAATGAAACAGATACGTTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910465       <-- ...............................
EV539657       <-- ...............................
EX760204       <-- ...............................
EX753035       <-- TCg............................
EW739078       <-- ...............................
FD555460       <-- ...............................
FD537758       <-- ...............................
FD581553       <-- ...............................
EY894801       <-- ...............................
EX763735       --> ...............................
EY914418       --> ...............................
EY901136       --> ...............................
EX749306       --> ...............................
EY898863       --> ...............................
FD559819       --> ...............................
EW734809       --> ...............................
EY929233       --> ...............................
FD938366       --> ...............................
FY443425       --> ...............................
EV534839       --> TCCATTTAACAATGAAACAGATACGTTACTG