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Alignment for radish unigene UN17381

               -1     -     49
UN17381        --> ..TGGGCTCCCCGAATCTACTTCTCTCTCTCTCTCT--CTCTCTCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- ......CTCCCCGAGTCTACTTCTCTCTCTATCTCT--CTCTCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- ..........ggGAATCTACTTCTCTCTCTCTCTCT--CTCTCTCTCTC-  Raphanus raphanistrum subsp. maritimus
FD554674       <-- ...................tctactTCTCTCTCTCT--CTCTCTCTCTCT  Raphanus raphanistrum subsp. landra
FD574019       <-- .....................................tgTCTCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- ..................................................  Raphanus sativus cv GSK3-1
FD565202       <-- ..................................................  Raphanus sativus var. oleiformis
EW727948       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ..................................................  Raphanus sativus var. oleiformis
EX775343       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565189       <-- ..................................................  Raphanus sativus var. oleiformis
EY927096       <-- ..................................................  Raphanus sativus var. oleiformis
FD552792       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX767278       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY928622       <-- ..................................................  Raphanus sativus var. oleiformis
FY437890       <-- ..................................................  Raphanus sativus cv GSK3-1
FD944486       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> ..TGGGCTCCCCGAATCTACTTCTCTCTCTCTCTCT--GTCTCTCTCTCT  Raphanus raphanistrum subsp. landra
EV551172       --> ....GGCTCCCCGAATCTACTTCTCTCTCTCTCTCTGTCTCTCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> ....GGCTCCCCGAATCTACTTCTCTCTCTCTCTGT--CTCTCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY931047       --> ....GGCTCCCCGAATCTACTTCTCTCTCTCTCTGT--CTCTCTCTCTCT  Raphanus sativus var. oleiformis
FD549907       --> ....GGCTCCCCGAGTCTACTTCTCTCTCTATCTCT--CTCTCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ....GGCTCCCCGAATCTACTTCTCTCTCTCTCT-G--C-CTCTCTCTCT  Raphanus sativus var. oleiformis
FD571725       --> ....GGCTCCCCGAATCTACTTCTCTCTCTCTCTGT--CTCTCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
FD558863       --> ggactcCTCCCCGAATCTACTTCTCTCTCTCTCTCT--CTCTCTCTCT--  Raphanus raphanistrum subsp. landra
EV528009       --> ..........ggGAATCTACTTCTCTCTCTCTCTCT--CTCTCTCTCTCT  Raphanus raphanistrum subsp. maritimus
EX771276       --> ...........gGAATCTACTTCTCTCTCTCTCTCT--GTCTCTCTCTCT  Raphanus raphanistrum subsp. landra
EV552407       --> ................ggACTTCTCTCTCTATCTCT--CTCTCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> ..............gggaatctactTCTCTCTCTCT--CTGTCTCTCTCT  Raphanus sativus var. oleiformis
EX890145       --> ..................ggctccccgaatctactT--CTCTCTCTCTCT  Raphanus sativus var. oleiformis
EY933045       --> ....................ggccccgaatctactT--CTCTCTCTCTCT  Raphanus sativus var. oleiformis
EY945929       --> .................gggctccccgaatctactT--CTCTCTCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> ..................ggctccccgaatctactT--CTCTCCCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................ggctccccgaatctactT--CTCTCTCTCTCT  Raphanus sativus var. oleiformis
FD948743       --> ..................ggctccccgaatctactT--CTCTCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ......................ggctccccgaatctactTCTCTCTCTCT  Raphanus sativus var. oleiformis
FY443206       --> ..................................................  Raphanus sativus cv GSK3-1
FY433628       --> ..................................................  Raphanus sativus cv GSK3-1
FY441886       --> ..................................................  Raphanus sativus cv GSK3-1
FD556494       --> ..................................................  Raphanus raphanistrum subsp. landra
FY441819       --> ..................................................  Raphanus sativus cv GSK3-1
EX758161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               49     -     99
UN17381        --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- CTAGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- -TAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. maritimus
FD554674       <-- CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. landra
FD574019       <-- CTAGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- .............CGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv GSK3-1
FD565202       <-- .................................AAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
EW727948       <-- .........................................AAGCAAGCC  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ..................................................  Raphanus sativus var. oleiformis
EX775343       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565189       <-- ..................................................  Raphanus sativus var. oleiformis
EY927096       <-- ..................................................  Raphanus sativus var. oleiformis
FD552792       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX767278       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY928622       <-- ..................................................  Raphanus sativus var. oleiformis
FY437890       <-- ..................................................  Raphanus sativus cv GSK3-1
FD944486       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. landra
EV551172       --> CTAGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> --AGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Early Scarlet Globe
EY931047       --> --AGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
FD549907       --> CTAGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> CTAGGATCCCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
FD571725       --> --AGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Early Scarlet Globe
FD558863       --> --AGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. landra
EV528009       --> --AGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. maritimus
EX771276       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. landra
EV552407       --> CTAGGATCTCTATCGCCGGTGGCTTGTGATGGCAAAGGATCAAGCAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> CTAGGATCTCTATCGCCGGTGGCTTGTGATGACAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
EX890145       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
EY933045       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
EY945929       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
FD948743       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv Early Scarlet Globe
FD939789       --> CTAGGATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus var. oleiformis
FY443206       --> ....GATCTCTATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv GSK3-1
FY433628       --> ...........ATCGCCGGTGGCTTGAGATGGCAAAGGATCAAGCAAGCC  Raphanus sativus cv GSK3-1
FY441886       --> ..................................................  Raphanus sativus cv GSK3-1
FD556494       --> ..................................................  Raphanus raphanistrum subsp. landra
FY441819       --> ..................................................  Raphanus sativus cv GSK3-1
EX758161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               99     -    149
UN17381        --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EV532107       <-- TTCTTCTTCAAAAACAGCTCAAAGATCTGTGTAAGAACCCGGTTGATGGT
FD554674       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGTAAGAACCCGGTTGATGGT
FD574019       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FY446190       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD565202       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EW727948       <-- TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EX893716       <-- ....TCTTCAGAAACAGCTCGAAGATCTGTGCAAGAACCCGGTTGATGGT
EX775343       <-- ..............CAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD565189       <-- ....................AAAGATCTGTGCAAGAACCCGGTTGATGGT
EY927096       <-- ............................GTGCAAGAACCCGGTTGATGGT
FD552792       <-- ...............................gAAGAACCCGGTTGATGGT
EX767278       <-- .........................................GTTGATGGT
FD554093       <-- ..................................................
EY928622       <-- ..................................................
FY437890       <-- ..................................................
FD944486       <-- ..................................................
EX761576       <-- ..................................................
FD935826       <-- ..................................................
FD558137       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EV551172       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EW723074       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EY931047       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD549907       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD560878       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD571725       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD558863       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGTAAGAACCCGGTTGATGGT
EV528009       --> TTCTTCTTCAAAAACAGCTCAAAGATCTGTGTAAGAACCCGGTTGATGGT
EX771276       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EV552407       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EX887600       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EX890145       --> TTCTTCTTCAGAAACAGCTCGAAGATCTGTGCAAGAACCCGGTTGATGGT
EY933045       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EY945929       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
EY947660       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD560896       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD948743       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FD939789       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FY443206       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FY433628       --> TTCTTCTTCAGAAACAGCTCAAAGATCTGTGCAAGAACCCGGTTGATGGT
FY441886       --> ....................cAAGATCTGTGCA-GAACCCGGTTGATGGT
FD556494       --> ...............................gAAGAACCCGGTTGATGGT
FY441819       --> ..................................................
EX758161       --> ..................................................

               149    -    199
UN17381        --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. maritimus
FD554674       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
FD574019       <-- TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv GSK3-1
FD565202       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EW727948       <-- TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCTGTGGAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EX775343       <-- TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
FD565189       <-- TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EY927096       <-- TTCTCTGCTGGTCTCGTTCATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FD552792       <-- TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
EX767278       <-- TTCTCTGCTGGTCTCGTTGATGAGAATAATGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ..........GTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
EY928622       <-- .....................................AGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FY437890       <-- ..................................................  Raphanus sativus cv GSK3-1
FD944486       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
EV551172       --> TTCTCTGCTGGTCTCGTTGATGAGAATAATGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCTGTGGAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
EY931047       --> TTCTCTGCTGGTCTCGTTCATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FD549907       --> TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FD571725       --> TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
FD558863       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
EV528009       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. maritimus
EX771276       --> TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
EV552407       --> TTCTCTGCTGGTCTCGTTGATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> TTCTCTGCTGGTCTCGTTAATGAGAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EX890145       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EY933045       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
EY945929       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FD948743       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
FD939789       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus var. oleiformis
FY443206       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv GSK3-1
FY433628       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv GSK3-1
FY441886       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTTTTCCAGTGGAGCGTTTC  Raphanus sativus cv GSK3-1
FD556494       --> TTCTCTGCTGGTCTCGTTGATGAAAATAACGTCTTCCAGTGGAGCGTTTC  Raphanus raphanistrum subsp. landra
FY441819       --> ..................................................  Raphanus sativus cv GSK3-1
EX758161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               199    -    249
UN17381        --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. maritimus
FD554674       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
FD574019       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv GSK3-1
FD565202       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus var. oleiformis
EW727948       <-- GGTTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus var. oleiformis
EX775343       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
FD565189       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus var. oleiformis
EY927096       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGAATTCTTTAATGCAA  Raphanus sativus var. oleiformis
FD552792       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
EX767278       <-- GATTATGGGTCCTCCTGACACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
EY928622       <-- GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus sativus var. oleiformis
FY437890       <-- ..............CTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv GSK3-1
FD944486       <-- ..........................ATGAAGGGGGTTTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
EV551172       --> GATTATGGGTCCTCCTGACACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> GGTTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
EY931047       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGAATTCTTTAATGCAA  Raphanus sativus var. oleiformis
FD549907       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus var. oleiformis
FD571725       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
FD558863       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
EV528009       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. maritimus
EX771276       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTT-CTTTAATGCAA  Raphanus raphanistrum subsp. landra
EV552407       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAA  Raphanus sativus var. oleiformis
EX890145       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus var. oleiformis
EY933045       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus sativus var. oleiformis
EY945929       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus var. oleiformis
FD948743       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus sativus cv Early Scarlet Globe
FD939789       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus var. oleiformis
FY443206       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv GSK3-1
FY433628       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv GSK3-1
FY441886       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGCTTCTTTAATGCAA  Raphanus sativus cv GSK3-1
FD556494       --> GATTATGGGTCCTCCTGATACCTTGTATGAAGGGGGTTTCTTTAATGCAA  Raphanus raphanistrum subsp. landra
FY441819       --> ..................................................  Raphanus sativus cv GSK3-1
EX758161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               249    -    299
UN17381        --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EV532107       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD554674       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD574019       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY446190       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD565202       <-- TTATGACGTTTCCGCCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EW727948       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX893716       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX775343       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD565189       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EY927096       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD552792       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX767278       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD554093       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCACGTTC
EY928622       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY437890       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD944486       <-- TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX761576       <-- ..................................................
FD935826       <-- ..................................................
FD558137       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCACGTTC
EV551172       --> TTATTACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EW723074       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EY931047       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD549907       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD560878       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD571725       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCACGTTC
FD558863       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EV528009       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX771276       --> TTATGACGTT-CCACCGG-TTATCCTAATAATCCACCAACTGTC......
EV552407       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX887600       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX890145       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EY933045       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EY945929       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EY947660       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD560896       --> TTATGACGTTTCCGCCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD948743       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD939789       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY443206       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY433628       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY441886       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FD556494       --> TTATGACGTTTCCACCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
FY441819       --> TTATGACGTTTCC-CCGGATTATCCTAATAATCCACCAACTGTCAAGTTC
EX758161       --> ..................................................

               299    -    349
UN17381        --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGGAAAGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. maritimus
FD554674       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
FD574019       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
FD565202       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EW727948       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EX775343       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
FD565189       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTTTGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EY927096       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FD552792       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
EX767278       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATCCTGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
EY928622       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FY437890       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
FD944486       <-- ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
EV551172       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
EY931047       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FD549907       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGGAAAGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FD571725       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
FD558863       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
EV528009       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGGAAAGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCTGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EX890145       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EY933045       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
EY945929       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FD948743       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus var. oleiformis
FY443206       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
FY433628       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
FY441886       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
FD556494       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus raphanistrum subsp. landra
FY441819       --> ACCTCCGAGGTGTGGCATCCTAATGTTTATTCCGATGGAAAAGTTTGCAT  Raphanus sativus cv GSK3-1
EX758161       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               349    -    399
UN17381        --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. maritimus
FD554674       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
FD574019       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAACGGATACGAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
FD565202       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EW727948       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACTAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EX775343       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
FD565189       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EY927096       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FD552792       <-- ATCGATTTTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
EX767278       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
EY928622       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FY437890       <-- ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
FD944486       <-- ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- .............gCTCCTGGTAATGATCCTAATGGATACGAACTTGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
EV551172       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACTAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
EY931047       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FD549907       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FD571725       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
FD558863       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
EV528009       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EX890145       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EY933045       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
EY945929       --> ATCGATTCTTCACCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FD948743       --> ATCGATTCTTCATCCTCCTGGTAATGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus var. oleiformis
FY443206       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
FY433628       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
FY441886       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
FD556494       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGGTACGAGCTTGCCT  Raphanus raphanistrum subsp. landra
FY441819       --> ATCGATTCTTCATCCTCCTGGTAACGATCCTAATGGATACGAGCTTGCCT  Raphanus sativus cv GSK3-1
EX758161       --> .............gCTCCTGGTAATGATCCTAATGGATACGAACTTGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               399    -    449
UN17381        --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EV532107       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD554674       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD574019       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FY446190       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD565202       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EW727948       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAACATTGTGTTGAGTATC
EX893716       <-- TTGAACGTTGGAACCCTTTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX775343       <-- CTGAACGTTGGAACCCTGTTCACACGGCAGAGAGCATTGTGTTGAGTATC
FD565189       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EY927096       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD552792       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX767278       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGT-GAGTATC
FD554093       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EY928622       <-- CTGAACGTTGGAACCCTGTTCACACGGTTGAGAGCATTGTGTTGAGTATC
FY437890       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD944486       <-- CTGAACGTTGGAACCCTGTTCACACGGTTGAGAGCATTGTGTTGAGTATC
EX761576       <-- CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD935826       <-- ..................................................
FD558137       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EV551172       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EW723074       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAACATTGTGTTGAGTATC
EY931047       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD549907       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD560878       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD571725       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD558863       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EV528009       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX771276       --> ..................................................
EV552407       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX887600       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX890145       --> CTGAACGTTGGAACCCTTTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EY933045       --> CTGAACGTTGGAACCCTGTTCACACGGTTGAGAGCATTGTGTTGAGTATC
EY945929       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EY947660       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD560896       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD948743       --> CTGAACGTTGGAACCCTGTTCACACGGTTGAGAGCATTGTGTTGAGTATC
FD939789       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FY443206       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FY433628       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FY441886       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FD556494       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
FY441819       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC
EX758161       --> CTGAACGTTGGAACCCTGTTCACACGGTAGAGAGCATTGTGTTGAGTATC

               449    -    499
UN17381        --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. maritimus
FD554674       <-- ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. landra
FD574019       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
FD565202       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
EW727948       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
EX775343       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCAAACGTTGAAGC  Raphanus raphanistrum subsp. landra
FD565189       <-- ACATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus var. oleiformis
EY927096       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus var. oleiformis
FD552792       <-- ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. landra
EX767278       <-- ATATCGATGCTCTCGGGTCCCAATGACGAGTCACCGGCGAATGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCAAACGTTGAAGC  Raphanus raphanistrum subsp. landra
EY928622       <-- ATATCGATGCTCTCAGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
FY437890       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
FD944486       <-- ATATCGATGCTCTCAGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAATGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCAAACGTTGAAGC  Raphanus raphanistrum subsp. landra
EV551172       --> ATATCGATGCTCTCGGGTCCCAATGACGAGTCACCGGCGAATGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
EY931047       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus var. oleiformis
FD549907       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ACATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus var. oleiformis
FD571725       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
FD558863       --> ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. landra
EV528009       --> ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCCAATGTGGAAGC  Raphanus sativus var. oleiformis
EX890145       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
EY933045       --> ATATCGATGCTCTCAGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
EY945929       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> AT................................................  Raphanus sativus var. oleiformis
FD948743       --> ATATCGATGCTCTCAGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus var. oleiformis
FY443206       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
FY433628       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
FY441886       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
FD556494       --> ATATCGATGCTCTCGGGTCCCAACGATGAGTCACCGGCCAATGTGGAAGC  Raphanus raphanistrum subsp. landra
FY441819       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAACGTGGAAGC  Raphanus sativus cv GSK3-1
EX758161       --> ATATCGATGCTCTCGGGTCCCAACGACGAGTCACCGGCGAATGTGGAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               499    -    549
UN17381        --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. maritimus
FD554674       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
FD574019       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAATTGAGTC  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
FD565202       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EW727948       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- AGCAAAGGAATGGAGAGACAACAGAGCATAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EX775343       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
FD565189       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EY927096       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
FD552792       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
EX767278       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
EY928622       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
FY437890       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
FD944486       <-- AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- ..................................................  Raphanus sativus var. oleiformis
FD558137       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
EV551172       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Early Scarlet Globe
EY931047       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
FD549907       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
FD571725       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Early Scarlet Globe
FD558863       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
EV528009       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EX890145       --> AGCAAAGGAATGGAGAGACAACAGAGCATAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EY933045       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAG-AAGAAAGTGAGTC  Raphanus sativus var. oleiformis
EY945929       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> AGCAAAGGAATGGAGAG.................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTACGAAGAAAGTGAGTC  Raphanus sativus var. oleiformis
FY443206       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
FY433628       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
FY441886       --> AGCAAAGGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
FD556494       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. landra
FY441819       --> AGCAAAGGAATAGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus sativus cv GSK3-1
EX758161       --> AGCAAAAGAATGGAGAGACAACAGAGCAGAGTTTAGGAAGAAAGTGAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               549    -    599
UN17381        --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. maritimus
FD554674       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
FD574019       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
FD565202       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EW727948       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EX775343       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
FD565189       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EY927096       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
FD552792       <-- GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTTTCCTGCGT  Raphanus raphanistrum subsp. landra
EX767278       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
EY928622       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
FY437890       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
FD944486       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- GCTGTGTGAGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- .................................................T  Raphanus sativus var. oleiformis
FD558137       --> GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
EV551172       --> GCTGTGTGAGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Early Scarlet Globe
EY931047       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
FD549907       --> GCTGTGTTCGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
FD571725       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Early Scarlet Globe
FD558863       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
EV528009       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> GCTGTGTTCGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EX890145       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EY933045       --> GCTGTGTGAGAAGATCGCAAGAGATGCTATGAGATTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
EY945929       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus var. oleiformis
FY443206       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
FY433628       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
FY441886       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
FD556494       --> GCTGTGTTCGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. landra
FY441819       --> GCTGTGTGAGAAGATCGCAAGAGATGCTGTGA--TTCATCTCTCCTGCGT  Raphanus sativus cv GSK3-1
EX758161       --> GCTGTGTGAGAAGATCGCAAGAGATGCTATGA--TTCATCTCTCCTGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               599    -    649
UN17381        --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- TGTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. maritimus
FD554674       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. landra
FD574019       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
FD565202       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
EW727948       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
EX775343       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGTGAGAGAG  Raphanus raphanistrum subsp. landra
FD565189       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
EY927096       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAG--  Raphanus sativus var. oleiformis
FD552792       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. landra
EX767278       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGTGAGAGAG  Raphanus raphanistrum subsp. landra
EY928622       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGTGAGAGAG  Raphanus sativus var. oleiformis
FY437890       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
FD944486       <-- TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGTGAGAGAG  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
FD558137       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGTGAGAGA.  Raphanus raphanistrum subsp. landra
EV551172       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Early Scarlet Globe
EY931047       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGA-  Raphanus sativus var. oleiformis
FD549907       --> TGTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
FD571725       --> TTTTATGTATCGTAGAAAT-AATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Early Scarlet Globe
FD558863       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. landra
EV528009       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> TGTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
EX890145       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus var. oleiformis
EY933045       --> TTTTAT............................................  Raphanus sativus var. oleiformis
EY945929       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ..................................................  Raphanus sativus var. oleiformis
FY443206       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
FY433628       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
FY441886       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
FD556494       --> TTTTATGTATCGTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. landra
FY441819       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus sativus cv GSK3-1
EX758161       --> TTTTATGTATCTTAGAAATTAATTTCTATCCTAAGCTAAGAGAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               649    -    699
UN17381        --> A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- AGAGAGAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTTTGTGCTCATCAA  Raphanus raphanistrum subsp. maritimus
FD554674       <-- A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTTTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
FD574019       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
FD565202       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
EW727948       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- A----GAAGGTAAGAAGAAG---CAGC--ATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
EX775343       <-- A------AGGTAAGAAGAAGAAGCAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
FD565189       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
EY927096       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
FD552792       <-- A------AGGTAAGAAGAAG---CAGCAGATGAATCTTTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
EX767278       <-- A------AGGTAAGAAGAAG---CGGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- A------AGGTAAGAAGAAGAAGCAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
EY928622       <-- A------AGGTAAGAAGAAGAAGCAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
FY437890       <-- A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
FD944486       <-- A------AGGTAAGAAGAAGAAGCAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCAACAA  Raphanus sativus var. oleiformis
FD558137       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551172       --> A----GAAGGTAAGAAGAAG---CGGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv Early Scarlet Globe
EY931047       --> -------A-GTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
FD549907       --> Agagagaagtaa......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ..................................................  Raphanus sativus var. oleiformis
FD571725       --> A------AG-TAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAG  Raphanus sativus cv Early Scarlet Globe
FD558863       --> A-----GAAGTAAGAAGAAG---CAGCAGATGAATCTTTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
EV528009       --> A.................................................  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> A--GAGAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> A------AGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
EX890145       --> A----GAAGGTAAGAAGAAG---CAGCA--TGAATCTGTGTGCTCATCAA  Raphanus sativus var. oleiformis
EY933045       --> ..................................................  Raphanus sativus var. oleiformis
EY945929       --> Agaaggtaag........................................  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ..................................................  Raphanus sativus var. oleiformis
FY443206       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
FY433628       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
FY441886       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
FD556494       --> A------AGGTAAGAAGAAG---CAGCAGATGAATCTTTGTGCTCATCAA  Raphanus raphanistrum subsp. landra
FY441819       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus sativus cv GSK3-1
EX758161       --> A----GAAGGTAAGAAGAAG---CAGCAGATGAATCTGTGTGCTCATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               699    -    749
UN17381        --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- AAGCATTTCTTTTGGTTTTGGATTTGTCTTTAAGGATTTGGAATATTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. maritimus
FD554674       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
FD574019       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
FD565202       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus var. oleiformis
EW727948       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATA.....  Raphanus sativus var. oleiformis
EX775343       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
FD565189       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus var. oleiformis
EY927096       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus var. oleiformis
FD552792       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
EX767278       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
EY928622       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus var. oleiformis
FY437890       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
FD944486       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus var. oleiformis
FD558137       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551172       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTT....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAG--TTTGGAATATTGTG  Raphanus sativus cv Early Scarlet Globe
EY931047       --> AAGCTTT-CTTTTGGTTT-GGATTTGTCTT....................  Raphanus sativus var. oleiformis
FD549907       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ..................................................  Raphanus sativus var. oleiformis
FD571725       --> AAGCTTTTCTTTT.....................................  Raphanus sativus cv Early Scarlet Globe
FD558863       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
EV528009       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> AAGCATTTCTTTTGGTTTTGGATTTGTCTT....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> AAGCTTTTCTTTTGGTTTTGGATT-GTCTT....................  Raphanus sativus var. oleiformis
EX890145       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus var. oleiformis
EY933045       --> ..................................................  Raphanus sativus var. oleiformis
EY945929       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> A-GCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGG-TTTGGAATATTGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ..................................................  Raphanus sativus var. oleiformis
FY443206       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
FY433628       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
FY441886       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
FD556494       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. landra
FY441819       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus sativus cv GSK3-1
EX758161       --> AAGCTTTTCTTTTGGTTTTGGATTTGTCTTTAAGGGTTTGGAATATTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               749    -    799
UN17381        --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTTTACACACTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV532107       <-- GTGGAATCAAATCTAAACCCCCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. maritimus
FD554674       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. landra
FD574019       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv Early Scarlet Globe
FY446190       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv GSK3-1
FD565202       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus var. oleiformis
EW727948       <-- GTGGAATCAAATCTAGACCCCCTTTTAGGATT..................  Raphanus sativus cv Early Scarlet Globe
EX893716       <-- ..................................................  Raphanus sativus var. oleiformis
EX775343       <-- GTGGAATCAAATCTAAACCCCCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. landra
FD565189       <-- GTGGAATCAAATTTAAACCACCTTTTAGGATTATATTTT--CACACTCAT  Raphanus sativus var. oleiformis
EY927096       <-- GTGGAATCAAATCTAGACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus var. oleiformis
FD552792       <-- GTGGAATCAAATTTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. landra
EX767278       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554093       <-- GTGGAATCAAATCTAAACCCCCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. landra
EY928622       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus sativus var. oleiformis
FY437890       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv GSK3-1
FD944486       <-- GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus sativus cv Early Scarlet Globe
EX761576       <-- GTGGAAT...........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935826       <-- GTGGAATCAAATTTAAACCCCCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus var. oleiformis
FD558137       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551172       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723074       --> GTGGAATCAAATCTAGACCACCTTTTA.......................  Raphanus sativus cv Early Scarlet Globe
EY931047       --> ..................................................  Raphanus sativus var. oleiformis
FD549907       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560878       --> ..................................................  Raphanus sativus var. oleiformis
FD571725       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558863       --> GTGGAATCAAATCTAAACCACCTTTTAGGAT-ATATTTT---ACACTC..  Raphanus raphanistrum subsp. landra
EV528009       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX771276       --> ..................................................  Raphanus raphanistrum subsp. landra
EV552407       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX887600       --> ..................................................  Raphanus sativus var. oleiformis
EX890145       --> GTGGAA............................................  Raphanus sativus var. oleiformis
EY933045       --> ..................................................  Raphanus sativus var. oleiformis
EY945929       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY947660       --> GTGGAATCAA-TCTAAACCACCTTTTAGGAT-ATATTTT--CACACTCG.  Raphanus sativus cv Rat-Tail Radish #3870
FD560896       --> ..................................................  Raphanus sativus var. oleiformis
FD948743       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939789       --> ..................................................  Raphanus sativus var. oleiformis
FY443206       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv GSK3-1
FY433628       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv GSK3-1
FY441886       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACT...  Raphanus sativus cv GSK3-1
FD556494       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACACTCGT  Raphanus raphanistrum subsp. landra
FY441819       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--CACACTCGT  Raphanus sativus cv GSK3-1
EX758161       --> GTGGAATCAAATCTAAACCACCTTTTAGGATTATATTTT--TACTCTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               799    -    849
UN17381        --> TAATGGATTCCTTTTCATATTCCTCTTTTAATTTTGTTTTGATCTGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- TAATGGATTCCTTTTCAT................................
EV532107       <-- TAATGGATTCCTTTTCATATTCCT..........................
FD554674       <-- TAATGGATTCCTTTTCAT................................
FD574019       <-- TAATGGATTCCTTTTCATATTCCTC.........................
FY446190       <-- TAATGGATTCCTTTTCAT-TTCCT..........................
FD565202       <-- TAATGGATTCCTTTTCATATTCCTCTTTT.....................
EW727948       <-- ..................................................
EX893716       <-- ..................................................
EX775343       <-- TAATGGATTCCT......................................
FD565189       <-- TAATGGATTCCTTTTCATATTCC...........................
EY927096       <-- TAATGGATTCCTTTTCAT................................
FD552792       <-- TAATGGATTCCTTTTCATATTCCTCTTTTAATTTTGTTTTGATCTGATG.
EX767278       <-- TAATGGATTCCTTTTCATATct............................
FD554093       <-- TAATGGATTCCTTTTCATg...............................
EY928622       <-- TAATGGATTCCTTTTCATATTCCTCTTTT.....................
FY437890       <-- TAATGGATTCCTTTTCATATTCCTCTT.......................
FD944486       <-- TAATGGATTCCTTTTCATATTCCTCTTTTAATTTTGTTTTGATCTGATGA
EX761576       <-- ..................................................
FD935826       <-- TAATGGATTCCTTTTCATATTC............................
FD558137       --> ..................................................
EV551172       --> ..................................................
EW723074       --> ..................................................
EY931047       --> ..................................................
FD549907       --> ..................................................
FD560878       --> ..................................................
FD571725       --> ..................................................
FD558863       --> ..................................................
EV528009       --> ..................................................
EX771276       --> ..................................................
EV552407       --> ..................................................
EX887600       --> ..................................................
EX890145       --> ..................................................
EY933045       --> ..................................................
EY945929       --> ..................................................
EY947660       --> ..................................................
FD560896       --> ..................................................
FD948743       --> ..................................................
FD939789       --> ..................................................
FY443206       --> TAATGGATTCCTTTTCAT................................
FY433628       --> TAATGGATTCCTTTTCATATTCCT..........................
FY441886       --> ..................................................
FD556494       --> TAATGGATTCCTTTTCATATTCCTCTTTTA-TTTTGTTTTGATCTGA...
FY441819       --> TAATGGATTCCTTTTCATATTCCTC.........................
EX758161       --> TAATGG............................................

               849    -    899
UN17381        --> TATCAACCCTCGAAATGTATTACTCTCTCGGTTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545922       <-- .....................................
EV532107       <-- .....................................
FD554674       <-- .....................................
FD574019       <-- .....................................
FY446190       <-- .....................................
FD565202       <-- .....................................
EW727948       <-- .....................................
EX893716       <-- .....................................
EX775343       <-- .....................................
FD565189       <-- .....................................
EY927096       <-- .....................................
FD552792       <-- .....................................
EX767278       <-- .....................................
FD554093       <-- .....................................
EY928622       <-- .....................................
FY437890       <-- .....................................
FD944486       <-- TATCAACCCTCGAAATGTATTACTCTCTCGGTTCCTG
EX761576       <-- .....................................
FD935826       <-- .....................................
FD558137       --> .....................................
EV551172       --> .....................................
EW723074       --> .....................................
EY931047       --> .....................................
FD549907       --> .....................................
FD560878       --> .....................................
FD571725       --> .....................................
FD558863       --> .....................................
EV528009       --> .....................................
EX771276       --> .....................................
EV552407       --> .....................................
EX887600       --> .....................................
EX890145       --> .....................................
EY933045       --> .....................................
EY945929       --> .....................................
EY947660       --> .....................................
FD560896       --> .....................................
FD948743       --> .....................................
FD939789       --> .....................................
FY443206       --> .....................................
FY433628       --> .....................................
FY441886       --> .....................................
FD556494       --> .....................................
FY441819       --> .....................................
EX758161       --> .....................................