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Alignment for radish unigene UN17387

               1      -     51
UN17387        --> ACTTCAATAAAGGAAGTTTTTTTCATATTATTTTATCACATGTCGTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- ................................TTATCACATGTCGT-ACA  Raphanus raphanistrum subsp. maritimus
FD986740       <-- ..................................ATCACATGTCGTTACA  Raphanus raphanistrum subsp. landra
EV566329       <-- ..................................tcttaATGTCGTTACA  Raphanus raphanistrum subsp. landra
FD564159       <-- ..................................................  Raphanus sativus var. oleiformis
FD981600       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747904       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD570399       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD542546       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525552       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV534916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948668       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY909034       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734054       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD569326       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX757259       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747800       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD534033       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887733       <-- ..................................................  Raphanus sativus var. oleiformis
FD564343       <-- ..................................................  Raphanus sativus var. oleiformis
FD979841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550454       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556314       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV549359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939046       <-- ..................................................  Raphanus sativus var. oleiformis
EX771451       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX754138       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561863       <-- ..................................................  Raphanus sativus var. oleiformis
FD965750       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937706       <-- ..................................................  Raphanus sativus var. oleiformis
EV544849       --> ACTTCAATAAAGGAAGTTTTTTTCATATTATTCTATCGCATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961407       --> ACTTCAATAAAGGAAGTTTTTTTCATATTATTTTATCACATGTCGTTACA  Raphanus raphanistrum subsp. maritimus
FD552646       --> ....cgATAAAGGAAGTTTTTTTCATATTATTTTATCACATGTCGTTACA  Raphanus raphanistrum subsp. landra
EY944328       --> ........AAAGGAAGTTTTTTTCATATT---TTATCACATTTCGTTACA  Raphanus sativus cv Rat-Tail Radish #3870
EV530271       --> ......ggcAAGGAAGTTTTTT-CATATTATTTTATCACATGTCGTTACA  Raphanus raphanistrum subsp. maritimus
EY903762       --> .....agacAAGGAAGTTCTTTTCATATTATTTTATCACATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545528       --> .......gcAAGGAAGTTTTTATCATATTATTTTATCACATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573555       --> ......agcAAGGAAGTTTTTT-CATATTATTTTATCACATGTCGTTACA  Raphanus sativus cv Early Scarlet Globe
FD934262       --> ......ggcAAGGAAGTTTTTT-CATATTATTTTATCACATGTCGTTACA  Raphanus sativus var. oleiformis
FD935263       --> ......cgcAAGGAAGTTTTTTTCATATTATTTTATCACATTTCGTTACA  Raphanus sativus var. oleiformis
FD977327       --> ......ggcAAGGAAGTTTTTATCATATTATTTTATCACATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546416       --> ................TTTTTTTCATATTATTCTATCGCATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975820       --> ................TTTTTATCATATTATTTTATCACATTTCGTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751905       --> .....................TTCATATTATTTTATCACATGTCGTTACA  Raphanus raphanistrum subsp. maritimus
EX775488       --> ........................ATACTATTTTATCACATGTCGTTACA  Raphanus raphanistrum subsp. landra
FD982934       --> ..................................ATCACATGTCGTTACA  Raphanus raphanistrum subsp. landra
EV571484       --> ...................................cttaATGTCGTTACA  Raphanus raphanistrum subsp. landra
EV545665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760885       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               51     -    101
UN17387        --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- GCAT-ACAAATGCAAATTAAACGTGGGTAAAAGGAAGT-ACAACAACAAT
FD986740       <-- GCATTACAAATGCAAATTAAACGTGGTTAAAAGGAAGTTACAACAACAAT
EV566329       <-- GCATTACAAATGCAAATTAAACGTGGTTAAAAGGAAGTTACAACAACAAT
FD564159       <-- ....TACAAATGCAAAT-AAACGTGGGTAAA-GGAAGT-ACAACAACAAT
FD981600       <-- ..........................gtggtaaaggagTACAACAACAAT
EV550352       <-- .......................................gCAACAACAAT
FD549470       <-- .........................................AACAACAAT
EX747904       <-- .................................................T
FD570399       <-- ...................................aaagaagtacacaca
FD542546       <-- ..................................................
EV525552       <-- ..................................................
EV534916       <-- ..................................................
EY948668       <-- ..................................................
EY909034       <-- ..................................................
EW734054       <-- ..................................................
FD569326       <-- ..................................................
EX757259       <-- ..................................................
EX747800       <-- ..................................................
FD534033       <-- ..................................................
EX887733       <-- ..................................................
FD564343       <-- ..................................................
FD979841       <-- ..................................................
FD550454       <-- ..................................................
FD556314       <-- ..................................................
EV549359       <-- ..................................................
FD939046       <-- ..................................................
EX771451       <-- ..................................................
EX754138       <-- ..................................................
EY907954       <-- ..................................................
FD561863       <-- ..................................................
FD965750       <-- ..................................................
FD937706       <-- ..................................................
EV544849       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD961407       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD552646       --> GCATTACAAGTGCAAATTAAACGTGGTTAAAAGGAAGTTACAACAACAAT
EY944328       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
EV530271       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
EY903762       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD545528       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD573555       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD934262       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD935263       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD977327       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD546416       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD975820       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
EX751905       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
EX775488       --> GCATTACAAATGCAAATTAAACGTGGGTAAAAGGAAGTTACAACAACAAT
FD982934       --> GCATTACAAATGCAAATTAAACGTGGTTAAAAGGAAGTTACAACAACAAT
EV571484       --> GCATTACAAATGCAAATTAAACGTGGTTAAAAGGAAGTTACAACAACAAT
EV545665       --> .......................................gCAACAACAAT
EX760885       --> ..................................................

               101    -    151
UN17387        --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- ACTT-GAAAGATAAAGACATACGCGTTAATTATTATGTAGACATTATTCA
FD986740       <-- ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EV566329       <-- ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACTTTATTCA
FD564159       <-- ACTT-GAAAGATAAAGACATACGC-TTAATTATTATGTAGAC-TTA-TCA
FD981600       <-- ACTTTGAA-GATAA-GACATACGC-TTAATTATTATGTAGAC-TTATTCA
EV550352       <-- ACTT-GAAAGATAAAGACATACGCGTTAATTATTATGTAGACTTTATTCA
FD549470       <-- ACTTTGAA-GATAAAGACATACGCCT-AATTATTATGTAGACCT-ATTCA
EX747904       <-- ACTTTGAAAGA-AAAGACATACGCCT-AATTATTATGTAGAC-TTATTCA
FD570399       <-- tacTTGAAAGATAA-GACATACGC-TTAATTAT-ATGTGGAC-TTA-TCA
FD542546       <-- ...........................AATTATTATGTAGACCT-ATTCA
EV525552       <-- ............................ATTATTATGTAGACTTTATTCA
EV534916       <-- .............................TTATTATGTAGACGTTATTCA
EY948668       <-- ..............................TATTATGTAGAC-TTA-TCA
EY909034       <-- ................................TTATGTAGAC-TTA-TCA
EW734054       <-- ...................................TGTAGAC-TTA-TCA
FD569326       <-- ...................................TGTAGAC-TTA-TCA
EX757259       <-- ..............................................TTCA
EX747800       <-- ...............................................TCA
FD534033       <-- .......................................gtagactaTCA
EX887733       <-- ................................................CA
FD564343       <-- ................................................CA
FD979841       <-- ................................................CA
FD550454       <-- .................................................A
FD556314       <-- ..................................................
EV549359       <-- ..................................................
FD939046       <-- ..................................................
EX771451       <-- ..................................................
EX754138       <-- ..................................................
EY907954       <-- ..................................................
FD561863       <-- ..................................................
FD965750       <-- ..................................................
FD937706       <-- ..................................................
EV544849       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD961407       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD552646       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EY944328       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EV530271       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EY903762       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD545528       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD573555       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD934262       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD935263       --> ACTTTGAAGGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD977327       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD546416       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
FD975820       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EX751905       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EX775488       --> ACTTTGAAAGATAAAGACACACGCCTTAATTATTATGTAGACCTTATTCA
FD982934       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EV571484       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EV545665       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA
EX760885       --> ACTTTGAAAGATAAAGACATACGCCTTAATTATTATGTAGACCTTATTCA

               151    -    201
UN17387        --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD986740       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV566329       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD564159       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD981600       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV550352       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD549470       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX747904       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD570399       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD542546       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV525552       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV534916       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EY948668       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGTCACAAAACGTAAAACAA
EY909034       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EW734054       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD569326       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX757259       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX747800       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD534033       <-- TGCGCATAG-CAAGCAAACAT-A-TGGTCATGACACAAAACGTAAA-CAA
EX887733       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACGCAAAACGTAAAACAA
FD564343       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD979841       <-- TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD550454       <-- TGCGCATAGGCAAGCAAACAT-A-TGGTCATGACACAAA-CGTAAA-CAA
FD556314       <-- TGCGCATAGGCAAGCAAACATTAT-GGTCATGACACAAAACGTAAA-CAA
EV549359       <-- ..........................GTCATGACACAAAACGTAAAACAA
FD939046       <-- ..................................................
EX771451       <-- ..................................................
EX754138       <-- ..................................................
EY907954       <-- ..................................................
FD561863       <-- ..................................................
FD965750       <-- ..................................................
FD937706       <-- ..................................................
EV544849       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD961407       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD552646       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EY944328       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGTCACAAAACGTAAAACAA
EV530271       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EY903762       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD545528       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD573555       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD934262       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD935263       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD977327       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD546416       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD975820       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX751905       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX775488       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
FD982934       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV571484       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EV545665       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA
EX760885       --> TGCGCATAGGCAAGCAAACATTATTGGTCATGACACAAAACGTAAAACAA

               201    -    251
UN17387        --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD986740       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV566329       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD564159       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD981600       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV550352       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD549470       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EX747904       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD570399       <-- ACAGAAGGGAAACACAC-GTACGTGATCAAACATAAAGCATACTTAACCG
FD542546       <-- ACAGAAGGGAAACACACCGTACGTGATCAAATATAAAGCATACTTAACCG
EV525552       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV534916       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EY948668       <-- ACAGAAGGGAAACACACTGTACGTGATCAAACATAAAGCATACTTAACCG
EY909034       <-- ACAGAAGGGAAACACACCGTACGTGATCAAATATAAAGCATACTTAACCG
EW734054       <-- ACAGAAGGGAAACACAC-GTACGTGATCAAACATAAAGCATACTTAACCG
FD569326       <-- AC--AAGGGAAACACAC-GTACGT-ATCAAACATAAAGCATACTTAACCG
EX757259       <-- ACAGAGGGGAAACACAC-GTACGTGATCAAATATAAAGCATACTTAACCG
EX747800       <-- ACAGAAGGGAAACACACCGTACGTGATCGAACATAAAGCATACTTAACCG
FD534033       <-- ACAGAAGGGAAACACAC-GTACGTGATCAAACATAAAGCATACTTAAC-G
EX887733       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD564343       <-- ACAGAAGGGAAACACAC-GTACGTGATCAAACATAAAGCATACTTAACCG
FD979841       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD550454       <-- ACAGAAGGGAAACACAC-GTACGTGATCAAACATAAAGCATACTTAAC-G
FD556314       <-- ACAGAAGGGAAACACAC-GTACGCGATCAAACATAAAGCATACTTAAC-G
EV549359       <-- ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD939046       <-- .............ACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EX771451       <-- .........................ATCAAACATAAAGCATACTTAACCG
EX754138       <-- ..........................TCAAATATAAAGCATACTTAACCG
EY907954       <-- ..................................................
FD561863       <-- ..................................................
FD965750       <-- ..................................................
FD937706       <-- ..................................................
EV544849       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD961407       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD552646       --> ACAGAAGGGAAACACACCGTACGCGATCAAACATAAAGCATACTTAACCG
EY944328       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV530271       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EY903762       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD545528       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD573555       --> ACA--AGGGAAACACACCGTACGT-ATCAAACATAAAGCATACTTAACCG
FD934262       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAGCCG
FD935263       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD977327       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD546416       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD975820       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EX751905       --> ACAGAAGGGAAACACACCGTACGTGATCGAACATAAAGCATACTTAACCG
EX775488       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
FD982934       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV571484       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EV545665       --> ACAGAAGGGAAACACACCGTACGTGATCAAACATAAAGCATACTTAACCG
EX760885       --> ACAGAGGGGAAACACACCGTACGTGATCAAATATAAAGCATACTTAACCG

               251    -    301
UN17387        --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD986740       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV566329       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD564159       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD981600       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV550352       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD549470       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX747904       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD570399       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD542546       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV525552       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV534916       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EY948668       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EY909034       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EW734054       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD569326       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX757259       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX747800       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD534033       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGAC-TGGGACGAGGTC
EX887733       <-- AGGAGGCCAAAGGGATTTGGGACGATGCTAAAGAGACCTGGGACGAGGTC
FD564343       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD979841       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD550454       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGAC-TGGGACGAGGTC
FD556314       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV549359       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD939046       <-- AGGAGGCCAAAGGGATTTGGGACGATGCTAAAGAGACCTGGGACGAGGTC
EX771451       <-- ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX754138       <-- ACGAGGCAAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EY907954       <-- ................TTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD561863       <-- ................TTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD965750       <-- ................TTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD937706       <-- ..................................................
EV544849       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD961407       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD552646       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EY944328       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV530271       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EY903762       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD545528       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD573555       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD934262       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD935263       --> AGGAGGCCAAAGGGATTTGGGACGATGCTAAAGAGACCTGGGACGAGGTC
FD977327       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD546416       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD975820       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX751905       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX775488       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
FD982934       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV571484       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EV545665       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC
EX760885       --> ACGAGGCCAAAGGGATTTGGGACGACGCTAAAGAGACCTGGGACGAGGTC

               301    -    351
UN17387        --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD986740       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV566329       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD564159       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD981600       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV550352       <-- GAGGGTGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD549470       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX747904       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD570399       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD542546       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV525552       <-- GAGGAGGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV534916       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EY948668       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EY909034       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EW734054       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD569326       <-- GAGGATGCTGAGACCGTCGCAGGAAGTGGCTCCGAGTAGAGCTGAAGGTG
EX757259       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX747800       <-- GAGGATGCTGGGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD534033       <-- GAGGATGCTGAGACCGTTGATGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX887733       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD564343       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD979841       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD550454       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD556314       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV549359       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD939046       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX771451       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX754138       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EY907954       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD561863       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD965750       <-- GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD937706       <-- ..................................................
EV544849       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD961407       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAAAGCTAAAGGTG
FD552646       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EY944328       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV530271       --> GAGGAGGCTGAAACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EY903762       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD545528       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD573555       --> GAGGATGCTGAGACCGTCGCAGGAAGTGGCTCCGAGTAGAGCTGAAGGTG
FD934262       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAAAGCTAAAGGTG
FD935263       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD977327       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD546416       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD975820       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX751905       --> GAGGATGCTGGGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX775488       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
FD982934       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV571484       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EV545665       --> GAGGGTGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG
EX760885       --> GAGGATGCTGAGACCGTTGCTGGAAGTGGCTCCGAGTAGAGCTAAAGGTG

               351    -    401
UN17387        --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
FD986740       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EV566329       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
FD564159       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD981600       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550352       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549470       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747904       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
FD570399       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Early Scarlet Globe
FD542546       <-- CCGTGAGTAATCCACCGGCAGGGAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525552       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
EV534916       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948668       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY909034       <-- CCGTGAGTAATCCACCGGCAGGGAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734054       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Rat-Tail Radish #3870
FD569326       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Early Scarlet Globe
EX757259       <-- CCGTGAGTAATCCACCGGCAGGGAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747800       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
FD534033       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCCGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
EX887733       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD564343       <-- CCGTGAGTAATCCACCGGCAGGGAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD979841       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550454       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556314       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EV549359       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939046       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
EX771451       <-- CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EX754138       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907954       <-- CCGTGGGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561863       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD965750       <-- CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
FD937706       <-- ..................................................  Raphanus sativus var. oleiformis
EV544849       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961407       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
FD552646       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EY944328       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EV530271       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
EY903762       --> CCGTGGGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545528       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573555       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus cv Early Scarlet Globe
FD934262       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD935263       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus sativus var. oleiformis
FD977327       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546416       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975820       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751905       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. maritimus
EX775488       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
FD982934       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EV571484       --> CCATGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. landra
EV545665       --> CCGTGAGTAATCCACCGGCAGGAAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760885       --> CCGTGAGTAATCCACCGGCAGGGAGGCTGGCGTTGCAGCTGGTGAGAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN17387        --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD986740       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV566329       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD564159       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD981600       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV550352       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD549470       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX747904       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD570399       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD542546       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV525552       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV534916       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EY948668       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EY909034       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EW734054       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD569326       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX757259       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX747800       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD534033       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX887733       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD564343       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD979841       <-- GTCGTGACGATGATCCTACAACTGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD550454       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD556314       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV549359       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD939046       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX771451       <-- -TCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX754138       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EY907954       <-- GTAGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD561863       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAGA
FD965750       <-- GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD937706       <-- ...................AACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV544849       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD961407       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD552646       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EY944328       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV530271       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EY903762       --> GTAGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD545528       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD573555       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD934262       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD935263       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD977327       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD546416       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD975820       --> GTCGTGACGATGATCCTACAACTGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX751905       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX775488       --> -TCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
FD982934       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV571484       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EV545665       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA
EX760885       --> GTCGTGACGATGATCCTACAACCGGAGTTGAGGAGTGTTGAAGGAGAAAA

               451    -    501
UN17387        --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD986740       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV566329       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD564159       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD981600       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV550352       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD549470       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX747904       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD570399       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD542546       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV525552       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV534916       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EY948668       <-- GATAGCGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EY909034       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EW734054       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD569326       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX757259       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX747800       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD534033       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX887733       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD564343       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD979841       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD550454       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD556314       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV549359       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD939046       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX771451       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX754138       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EY907954       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD561863       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD965750       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD937706       <-- GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV544849       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD961407       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD552646       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EY944328       --> GATAGCGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV530271       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EY903762       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD545528       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD573555       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD934262       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD935263       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD977327       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD546416       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD975820       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX751905       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX775488       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
FD982934       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV571484       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EV545665       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG
EX760885       --> GATAGTGCCCATAGTAGGAAGCGAGAATACTCCATTAGCGTTCGTAGTCG

               501    -    551
UN17387        --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD986740       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATcc...
EV566329       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD564159       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD981600       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV550352       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD549470       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX747904       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD570399       <-- TAATTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD542546       <-- TGCTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV525552       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV534916       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EY948668       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EY909034       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EW734054       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD569326       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX757259       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX747800       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD534033       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX887733       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD564343       <-- TACTTGAAACATTTTGCCCAGCACACTGGAGCACAATTCCCGCATTAGGG
FD979841       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD550454       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD556314       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV549359       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD939046       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX771451       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX754138       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EY907954       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD561863       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD965750       <-- TACTTGAAACATTTTGCCCAGCGCACCGGAGCACAATTCCCGCATTAGGG
FD937706       <-- TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV544849       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATT....
FD961407       --> TACTTGAAACATTTTGCCCAGCGCACCGGAGCACAATTCCCGCATTAGGG
FD552646       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EY944328       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV530271       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EY903762       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD545528       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD573555       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD934262       --> T.................................................
FD935263       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD977327       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD546416       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD975820       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX751905       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX775488       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
FD982934       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATcc...
EV571484       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EV545665       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG
EX760885       --> TACTTGAAACATTTTGCCCAGCGCACTGGAGCACAATTCCCGCATTAGGG

               551    -    601
UN17387        --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD986740       <-- ..................................................
EV566329       <-- CAAGGAGGAGGAACAGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD564159       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD981600       <-- AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGAC
EV550352       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD549470       <-- AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGAC
EX747904       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD570399       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD542546       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV525552       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV534916       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EY948668       <-- AGAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EY909034       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EW734054       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD569326       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX757259       <-- AAAGGGGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX747800       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD534033       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX887733       <-- AAAGGAGGAGGAATGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD564343       <-- AAAGGAGGAGAAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD979841       <-- AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGAC
FD550454       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD556314       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV549359       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD939046       <-- AAAGGAGGAGGAATGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX771451       <-- AAAGGAGGT---GTGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX754138       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EY907954       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD561863       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD965750       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD937706       <-- AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV544849       --> ..................................................
FD961407       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD552646       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EY944328       --> AGAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV530271       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EY903762       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD545528       --> AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGAC
FD573555       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD934262       --> ..................................................
FD935263       --> AAAGGAGGAGGAATGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD977327       --> AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGA.
FD546416       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD975820       --> AAAGGAGGAGGAATGGAAGTGGCGTTATTGGTAGAGACGGTGCCAGTGAC
EX751905       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX775488       --> AAAGGAGGTGT---GGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
FD982934       --> ..................................................
EV571484       --> CAAGGAGGAGGAACAGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EV545665       --> AAAGGAGGAGGAACGGAAGTGACGTTATTGGTAGAGACGGTGCCAGTGAC
EX760885       --> AAAGGGGGAGGAACGGAAGTGACGTTATTGGTA.................

               601    -    651
UN17387        --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
FD986740       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV566329       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
FD564159       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
FD981600       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550352       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549470       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747904       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
FD570399       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus cv Early Scarlet Globe
FD542546       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525552       <-- AGAGCACATAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
EV534916       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948668       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY909034       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734054       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD569326       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus cv Early Scarlet Globe
EX757259       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747800       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
FD534033       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
EX887733       <-- AGAGCACCTAAGAAGACCTTGTATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
FD564343       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
FD979841       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550454       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556314       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
EV549359       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939046       <-- AGAGCACCTAAGAAGACCTTGTATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
EX771451       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
EX754138       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907954       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561863       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
FD965750       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCA-  Raphanus raphanistrum subsp. maritimus
FD937706       <-- AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
EV544849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961407       --> AGAGCACCTAAG......................................  Raphanus raphanistrum subsp. maritimus
FD552646       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
EY944328       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCC..  Raphanus sativus cv Rat-Tail Radish #3870
EV530271       --> AGAGCACATAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
EY903762       --> AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545528       --> AGAGCACCTAAGAAGACCTTGGATATTAAAAATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573555       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus cv Early Scarlet Globe
FD934262       --> ..................................................  Raphanus sativus var. oleiformis
FD935263       --> AGAGCACCTAAGAAGACCTTGTATATTAAAGATACTAGTAATACTGCCAA  Raphanus sativus var. oleiformis
FD977327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546416       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975820       --> AGAGCACC..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751905       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. maritimus
EX775488       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
FD982934       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571484       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. landra
EV545665       --> AGAGCACCTAAGAAGACCTTGGATATTAAAGATACTAGTAATACTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760885       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17387        --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD986740       <-- ..................................................
EV566329       <-- GAAGCCC...........................................
FD564159       <-- GAAGTCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD981600       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EV550352       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD549470       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGAA
EX747904       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD570399       <-- GAAGCCCGCCAAGAAGTCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD542546       <-- GAAGCCCGCCAAGAAGCCCGC------CAAGAAGCCCGCCAAGCTGAGCA
EV525552       <-- GAAGCCC-CCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EV534916       <-- GAAGCCCGCCAAGAAGCCCGCCAAGA---------CCACCAAGCTGAGCA
EY948668       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EY909034       <-- GAAGCCCGCCAAGAAGCCCGC------CAAGAAGCCCGCCAAGCTGAGCA
EW734054       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD569326       <-- GAAGCCCGCCAAGAAGTCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX757259       <-- GAAGCCCGCCAAGAAGCCCGC------CAAGAAGCCCGCCAAGCTGAGCA
EX747800       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD534033       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX887733       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD564343       <-- GAAGCCCGCCAAGAAGCCCGCCAAGA---------CCACCAAGCTGAGCA
FD979841       <-- GAAGCCCGCCAAGACGCCCGCCAAGACCACCAAGACCACCAAGCTGAG-A
FD550454       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD556314       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EV549359       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD939046       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX771451       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX754138       <-- GAAGCCCGCCAAGAAGCCCGC------CAAGAAGCCCGCCAAGCTGAGCA
EY907954       <-- GAAGCCCGCCAAGAAGCCCGCCAAGA---------CCACCAAGCTGAGCA
FD561863       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD965750       <-- -AAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD937706       <-- GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EV544849       --> ..................................................
FD961407       --> ..................................................
FD552646       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EY944328       --> ..................................................
EV530271       --> GAAGCCC-CCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EY903762       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAG---------CTGAGCA
FD545528       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGaa
FD573555       --> GAAGCCCGCCAAGAAGTCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD934262       --> ..................................................
FD935263       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD977327       --> ..................................................
FD546416       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD975820       --> ..................................................
EX751905       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX775488       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
FD982934       --> ..................................................
EV571484       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EV545665       --> GAAGCCCGCCAAGAAGCCCGCCAAGACCACCAAGACCACCAAGCTGAGCA
EX760885       --> ..................................................

               701    -    751
UN17387        --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD986740       <-- ..................................................
EV566329       <-- ..................................................
FD564159       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD981600       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV550352       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD549470       <-- TTAGCAATTGGAGACGCCACAATGAGACACATCAAGATCAATGAGAAAGT
EX747904       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD570399       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD542546       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV525552       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV534916       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EY948668       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EY909034       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EW734054       <-- TTAGCAATTGGAGACAACACAATGAGACACATCAAGATCAATGAGAAAGT
FD569326       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX757259       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX747800       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD534033       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX887733       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD564343       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD979841       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD550454       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD556314       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV549359       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD939046       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX771451       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX754138       <-- TTAGCAATTGGAGACACCGCAATGAGACACATCAAGATCAATGAGAAAGT
EY907954       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD561863       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD965750       <-- TTAGCAATTGGAGACACCACGATGAGACACATCAAGATCAATGAGAAAGT
FD937706       <-- TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV544849       --> ..................................................
FD961407       --> ..................................................
FD552646       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EY944328       --> ..................................................
EV530271       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EY903762       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD545528       --> ..................................................
FD573555       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD934262       --> ..................................................
FD935263       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD977327       --> ..................................................
FD546416       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD975820       --> ..................................................
EX751905       --> TT................................................
EX775488       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
FD982934       --> ..................................................
EV571484       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EV545665       --> TTAGCAATTGGAGACACCACAATGAGACACATCAAGATCAATGAGAAAGT
EX760885       --> ..................................................

               751    -    801
UN17387        --> TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD986740       <-- ..................................................
EV566329       <-- ..................................................
FD564159       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD981600       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV550352       <-- TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD549470       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EX747904       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD570399       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD542546       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV525552       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV534916       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EY948668       <-- TATGTTTTTGTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
EY909034       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EW734054       <-- TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD569326       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EX757259       <-- TATGTTTTTGTTCCTGAGGATTGCCACGTTTTTAGGATTACAAAAGACAA
EX747800       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD534033       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EX887733       <-- TATGTTTTTGTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD564343       <-- TATGTTTTTGTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD979841       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD550454       <-- TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD556314       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV549359       <-- TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
FD939046       <-- TATGTTTTTGTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGAAAA
EX771451       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EX754138       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EY907954       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD561863       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD965750       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
FD937706       <-- TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV544849       --> ..................................................
FD961407       --> ..................................................
FD552646       --> TATGTTTTT.........................................
EY944328       --> ..................................................
EV530271       --> TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTAC.........
EY903762       --> TATGTTT...........................................
FD545528       --> ..................................................
FD573555       --> TATGTTTTT.........................................
FD934262       --> ..................................................
FD935263       --> TATGTTTTTGTTCCTGAGa...............................
FD977327       --> ..................................................
FD546416       --> TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGat.............
FD975820       --> ..................................................
EX751905       --> ..................................................
EX775488       --> TATGTTTTTGTTCCTGAGGATTGCCATGTTT...................
FD982934       --> ..................................................
EV571484       --> TATGTTTTTGTTCCTGAGGATTGCCATGTTTTTAGGATTACAAAAGACAA
EV545665       --> TATGTTTTTCTTCCTGAGAATTGCCATGTTTTTAGGATTACAAAAGACAA
EX760885       --> ..................................................

               801    -    851
UN17387        --> ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
FD986740       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV566329       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD564159       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus sativus var. oleiformis
FD981600       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTT-CTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550352       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549470       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTT-CTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747904       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
FD570399       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus sativus cv Early Scarlet Globe
FD542546       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525552       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
EV534916       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTA-TTTATTTTCTGT.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948668       <-- ACGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCGGTGTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY909034       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734054       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD569326       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus sativus cv Early Scarlet Globe
EX757259       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747800       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
FD534033       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
EX887733       <-- ATGTATATCAAACTATAGAGCAGAGATAAGTAATTTATTTTCTGTGTTGT  Raphanus sativus var. oleiformis
FD564343       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus sativus var. oleiformis
FD979841       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTT-CTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550454       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556314       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. landra
EV549359       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939046       <-- ATGTATATCAAACTATAGAGCAGAGATAAGTAATTTATTTTCTGTGTTGT  Raphanus sativus var. oleiformis
EX771451       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. landra
EX754138       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907954       <-- ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561863       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus sativus var. oleiformis
FD965750       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. maritimus
FD937706       <-- ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus sativus var. oleiformis
EV544849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961407       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552646       --> ..................................................  Raphanus raphanistrum subsp. landra
EY944328       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV530271       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY903762       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545528       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD573555       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD934262       --> ..................................................  Raphanus sativus var. oleiformis
FD935263       --> ..................................................  Raphanus sativus var. oleiformis
FD977327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546416       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975820       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751905       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX775488       --> ..................................................  Raphanus raphanistrum subsp. landra
FD982934       --> ..................................................  Raphanus raphanistrum subsp. landra
EV571484       --> ATGTATTTCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTTTGTTGT  Raphanus raphanistrum subsp. landra
EV545665       --> ATGTATATCAAACTATAGAGCAGAGATGAGTAATTTATTTTCTGTGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760885       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN17387        --> AACTGGTACTGGATGTGATCCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EX748013       <-- AACTGGTACTGGATGTGATCC...
FD986740       <-- ........................
EV566329       <-- ........................
FD564159       <-- AACTGGTACTGGATGTGATCac..
FD981600       <-- AACTGGTACTGGATGTGATCC...
EV550352       <-- AACTGGTACTGGATGTGATCC...
FD549470       <-- AACTGGTACTGGATGTGATCCC..
EX747904       <-- AACTGGTACTGGATGTGATCC...
FD570399       <-- AACTGGTACTGGATGTGATCC...
FD542546       <-- AACTGGTACTGGATGTGATC....
EV525552       <-- AACTGGTACTGGATGTGATCC...
EV534916       <-- ........................
EY948668       <-- AACTGGTACTGGATGTGATCCCCT
EY909034       <-- AACTGGTACTGGATGTGATCC...
EW734054       <-- AACTGGTACTGGATGTGATCC...
FD569326       <-- AACTGGTACTGGATGTGATCC...
EX757259       <-- AACTGGTACTGGA...........
EX747800       <-- AACTGGTACTGGATGTGATCC...
FD534033       <-- AACTGGTACTGGATGTGATCC...
EX887733       <-- AATTGGTACTGGATGTGATCC...
FD564343       <-- AACTGGTACTGGATGTGATCC...
FD979841       <-- AACTGGTACTGGATGTGATCC...
FD550454       <-- AACTGGTACTGGATGTGATCCC..
FD556314       <-- AACTGGTACTGGATGTGATCCC..
EV549359       <-- AACTGGTACTGGATGTGATCC...
FD939046       <-- AATTGGTACTGGATGTGATgatcc
EX771451       <-- AACTGGTACTGGATGTGATCC...
EX754138       <-- AACTGGTACTGGATGTGATCC...
EY907954       <-- AACTGGTACTGGATGTGATCC...
FD561863       <-- AACTGGTACTGGATGTGATCC...
FD965750       <-- AACTGGTACTGGATGTGATCC...
FD937706       <-- AACTGGTACTGGATGTGATCC...
EV544849       --> ........................
FD961407       --> ........................
FD552646       --> ........................
EY944328       --> ........................
EV530271       --> ........................
EY903762       --> ........................
FD545528       --> ........................
FD573555       --> ........................
FD934262       --> ........................
FD935263       --> ........................
FD977327       --> ........................
FD546416       --> ........................
FD975820       --> ........................
EX751905       --> ........................
EX775488       --> ........................
FD982934       --> ........................
EV571484       --> AACTGGTACTGGATGTGATCC...
EV545665       --> AACTGGTACTGGATGTGATCC...
EX760885       --> ........................