Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17390

               1      -     51
UN17390        --> AGTCACTAACTAGTTTAAAATATTAACCACCACTTCATATAGTGTATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> AGTCACTAACTAGTTTAAAATATTAACCACCACTTCATATAGTGTATGTT
FD530975       --> ...........gGTTTAAAATATTAACCACCACTTCATATAGTGTATGTT
EX752360       --> ................AAAATATTAACCACCACTTCATATAGTGTATGTT
EX751901       --> ........................AACCACCACTTCATATAGTGTATGTT
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               51     -    101
UN17390        --> TCGTTTTACAACAAAGCAAAGTCAAACCTGACATGGATATTAGTATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> TCGTTTTACAACAAAGCAAAGTCAAACCTGACATGGATATTAGTATTTGA
FD530975       --> TCGTTTTACAACAAAGCAAAGTCAAACCTGACATGGATATTAGTATTTGA
EX752360       --> TCGTTTTACAACAAAGCAAAGTCAAACCTGACATGGATATTAGTATTTGA
EX751901       --> TCGTTTTACAACAAAGCAAAGTCAAACCTGACATGGATATTAGTATTTGA
EX775907       --> ..................AAGTCAAACCTGACATGGATATTAGTATTTGA
EX752906       --> .............................................TTTGA
EV541272       --> ..................................................

               101    -    151
UN17390        --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
FD530975       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
EX752360       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
EX751901       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
EX775907       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
EX752906       --> CACCAAGTCTTTGTTGATTTAATA-CGTATTAAGTTTTAAATATGGGAAA
EV541272       --> ............gcTGATTTAATATGGTATTAAGTTTTAAATATGGGAAA

               151    -    201
UN17390        --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
FD530975       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
EX752360       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
EX751901       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
EX775907       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAATATAGAACA
EX752906       --> GTGGGCAATGGGGTAAGTGACTTGGAAAAAGATAAAAGGAACATAGAACG
EV541272       --> GTGGGCAATGGGGTAAGTGACTTGGAAA--GATAAAAGGAACATAGAACA

               201    -    251
UN17390        --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ......................................CAGTACGGTGAG
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
FD530975       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
EX752360       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
EX751901       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
EX775907       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCATTACGGTGAG
EX752906       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG
EV541272       --> TTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAG

               251    -    301
UN17390        --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- GAAGACCCAGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
FD530975       --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EX752360       --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EX751901       --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EX775907       --> GAAGACC-AGTACGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EX752906       --> GAAGACC-AGTGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG
EV541272       --> GAAGACC-AGAGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTG

               301    -    351
UN17390        --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGCGCATAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- AGTAGCGAACGGTAGCATCTTCTCTGGGGGACATGCCGGCGCATAAAGCA
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGCGCATAAAGCA
FD530975       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGCGCATAAAGCA
EX752360       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGCGCATAAAGCA
EX751901       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGCGCATAAAGCA
EX775907       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-GCATGCCGGCGCATAAGGCA
EX752906       --> AGTAGCGAACGGTAGCATCTTCTCTGGGG-ACATGCCGGTGCATAAAGCA
EV541272       --> GGTAGCGAATGGTAGCATTTTCTCTGGGG-GCATGCCGGCGCATAAGGCA

               351    -    401
UN17390        --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
FD530975       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EX752360       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EX751901       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EX775907       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EX752906       --> TAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAG
EV541272       --> TAAAGAACTGCTCCTATGACTGCGTCGCCTGCACCGGTGGTGTCAACAAG

               401    -    451
UN17390        --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
FD530975       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
EX752360       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
EX751901       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
EX775907       --> CTCTTCTAGAGGAGTTTTCTCTGCTGTTCCGAGAAACAGTCTTCCGCTCA
EX752906       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAATCTTCCGCTCA
EV541272       --> CTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAGAAACAGTCTTCCGCTCA

               451    -    501
UN17390        --> GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
FD530975       --> GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
EX752360       --> GTGCTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
EX751901       --> GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCAT
EX775907       --> GTGTTCCTATCCCGTTGGCCTTTAGCTTAGCTGTCTCCGATGAAACGCAA
EX752906       --> GTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTT-CTCTGATGAAACGCAT
EV541272       --> GTGTTCCTATCCCGTTGGCCTTTAGCTTGGCTGTCTCCGATGAAACGCAT

               501    -    551
UN17390        --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- GTTGGAAAATGCTGCGGTCGAGTCTGTTCTTTGCTTCAGAGACTCCACCA
EV536928       <-- ..................................................
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
FD530975       --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
EX752360       --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
EX751901       --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
EX775907       --> GTTGGAAA-TGTTGCGGTCGAGTCTGATGTTTGCTTCAGCGACTCCACCA
EX752906       --> GTTGGAAA-TGCTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA
EV541272       --> GTTGGAAA-TGTTGCGGTCGAGTCTGATCTTTGCTTCAGAGACTCCACCA

               551    -    601
UN17390        --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
EV536928       <-- .......................GATTCTGATGTTTCTGTTGAATCTCTC
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
FD530975       --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
EX752360       --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
EX751901       --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
EX775907       --> AACTCTCAATGTCTGTCTCTTTGGATTCTGGTGTTTCTGTTGAATCTCTC
EX752906       --> AACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC
EV541272       --> AACTCTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTC

               601    -    651
UN17390        --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- TGGTTCATTAAGCATCCTTCTTCACCTAAGGTTAC...............
EV536928       <-- TGGATCATTAAGCATC-TTCTTCAC-TAAGGTTACGATCACAAACTTCAG
EX771823       <-- ..................................................
FD970142       <-- ..................................................
EW728497       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
FD530975       --> TGGATCATTAAGCATCCTTCTTCACCTAAGG...................
EX752360       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
EX751901       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
EX775907       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
EX752906       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG
EV541272       --> TGGATCATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAG

               651    -    701
UN17390        --> CTTCGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536928       <-- TTTTGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771823       <-- .......cATCTCAACATCATG-ACACA-GCGCACATG-AA-TGAAGACG  Raphanus raphanistrum subsp. landra
FD970142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728497       --> CTTCGGCAACCTCAACATCATGGACACAAGCGCACATGGAATTGAAGAAG  Raphanus sativus cv Early Scarlet Globe
FD530975       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX752360       --> CTTCGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGAAG  Raphanus raphanistrum subsp. maritimus
EX751901       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX775907       --> CTTCGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGACG  Raphanus raphanistrum subsp. landra
EX752906       --> CTTCGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGAAG  Raphanus raphanistrum subsp. maritimus
EV541272       --> TTTTGGCAATCTCAACATCATGGACACAAGCGCACATGGAATTGAAGACG  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN17390        --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
EX771823       <-- CT-CTGTCCATGC-TGAGGGAATTT-GCTGTGCAGACAACGTAATCGGCG
FD970142       <-- ..................................................
EW728497       --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
FD530975       --> ..................................................
EX752360       --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
EX751901       --> ..................................................
EX775907       --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
EX752906       --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG
EV541272       --> CTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCG

               751    -    801
UN17390        --> AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCATCAACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCATCAACTAA
EX771823       <-- AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCATCAACTAA
FD970142       <-- ..................................................
EW728497       --> AGTTGCAAGAGATCGTCTAATCCATCTCTTT...................
FD530975       --> ..................................................
EX752360       --> AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCGTCA-CTAA
EX751901       --> ..................................................
EX775907       --> AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCATCAACTAA
EX752906       --> AGTTGCAAGAGATCGTCTAA..............................
EV541272       --> AGTTGCAAGAGATCGTCTAATCCATCTCTTTTCTTCTCTGCATCAACTAA

               801    -    851
UN17390        --> AATAGGTATCTTCTTCCGACTTGCCTCTTTTGCAATCACCAATGCGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AATAGGTATCTTCTTCCGACTTGCCTCTTTTGCAATCACCAATGCGGTTT
EX771823       <-- AATAGGTATCTTCTTCCGACTTGCCTCTTTTGCAATCACCAATGCGGTTT
FD970142       <-- ..............................TGCAATCACCAATGCGGTTT
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> TATAGGTATCTTCTTCTGACTTGCCTCTTTTGCA-TCACCAAAGCGGTTT
EX751901       --> ..................................................
EX775907       --> AATAGGTATCTTCTTCCGACTTGCCTCTTTTGCA-TCACCAATGCGGTTT
EX752906       --> ..................................................
EV541272       --> AATAGGTATCTTCTTCCGACTTGCCTCTTTTGCAATCACCAATGCGGTTT

               851    -    901
UN17390        --> CGTGTAATCTTACATCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- CGTGTAATCTTACATCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGAT
EX771823       <-- CGTGTAATCTTACATCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGAT
FD970142       <-- CGTGTAATCTTACATCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGAT
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> CGTGTA-TCTTACATCAAAGTATGCAATGCTTGCTCTGTCT.........
EX751901       --> ..................................................
EX775907       --> CGTGTA-TCTTACA....................................
EX752906       --> ..................................................
EV541272       --> CGTGTAATCTTACATCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGAT

               901    -    951
UN17390        --> AACATGGTCGAGTGAGGAAGATCAGTTGGTACCATGGGTGGATATCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AACATGGTCGAGTGAGGAAGATCAGTTGGTACCATGGGTGGATATCCAGG
EX771823       <-- AACATGGTCGAGTGAGGAAGATCAGTTGGTACCATGGGTGGATATCCAGG
FD970142       <-- AACATGGTCGAGTGAGGAAGATCAGTTGGTACCATGGGTGGATATCCAGG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> AACATGGTCGA.......................................

               951    -   1001
UN17390        --> TGTATGAATACAAGTACGCGTTTTCGTTTGTTTATCAACAATGACGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- TGTATGAATACAAGTACGCGTTTTCGTTTGTTTATCAACAATGACGTAGG
EX771823       <-- TGTATGAATACAAGTACGCGTTTTCGTTTGTTTATCAACAATGACGTAGG
FD970142       <-- TGTATGAATATAAGTACGCGTTTTCGTTTGTTTATCAACAATGACGTAGG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1001   -   1051
UN17390        --> TAAATGGAGTATTGCCCTCTTTAGAGACCACAAGAAAAGAGGTATCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- TAAATGGAGTATTGCCCTCTTTAGAGACCACAAGAAAAGAGGTATCGACA
EX771823       <-- TAAATGGAGTATTGCCCTCTTTAGAGACCACAAGAAAAGAGGTATCGACA
FD970142       <-- TAAATGGAGTATTGCCCTCTTTAGAGACCACAAGAAAAGAGGTATCGACA
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1051   -   1101
UN17390        --> CCATCGGATTCAAGCTCCTCCAATATACCCTTCCCTTGAGAGTCATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- CCATCGGATTCAAGCTCCTCCAATATACCCTTCCCTTGAGAGTCATTTGC
EX771823       <-- CCATCGGATTCAAGCTCCTCCAATATACCCTTCCCTTGAGAGTCATTTGC
FD970142       <-- CCATCGGATTCAAGCTCCTCCAATATACCCTTCCCTTGAGAGTCATTTGC
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1101   -   1151
UN17390        --> TACCTTACTAATAAGCCTAGAAGTCAATCCCAGACGAGCTGCACAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- TACCTTACTAATAAGCCTAGAAGTCAATCCCAGACGAGCTGCACAAGTTA
EX771823       <-- TACCTTACTAATAAGCCTAGAAGTCAATCCCAGACGAGCTGCACAAGTTA
FD970142       <-- TACCTTACTAATAAGCCTAGAAGTCAATCCCAGACGAGCTGCACAAGTTA
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1151   -   1201
UN17390        --> AAGCGTTTCCAGCATTCCCCCCTCCTTGTACCTTGAGGCTAGTGCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AAGCGTTTCCAGCATTCCCCCCTCCTTGTACCTTGAGGCTAGTGCTTCGG
EX771823       <-- AAGCGTTTCCAGCATTCCCCCCTCCTTGTACCTTGAGGCTAGTGCTTCGG
FD970142       <-- AAGCGTTTCCAGCATTCCCCCCTCCTTGTACCTTGAGGCTAGTGCTTCGG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1201   -   1251
UN17390        --> ATCTTGTCATCAGGTTTAGGATAAGAATCCACCGTCGCCAGGAAATCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- ATCTTGTCATCAGGTTTAGGATAAGAATCCACCGTCGCCAGGAAATCCAC
EX771823       <-- ATCTTGTCATCGGGTTTAGGATAAGAATCCACCGTCGCCAGGAAATCCAC
FD970142       <-- ATCTTGTCATCAGGTTTAGGATAAGAATCCACCGTCGCCAGGAAATCCAC
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1251   -   1301
UN17390        --> AGTGGTTCCGCCGCAACCAAGGACAATGCCGTCATCCGTCGGAGGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AGTGGTTCCGCCGCAACCAAGGACAATGCCGTCATCCGTCGGAGGAGGAG
EX771823       <-- AGTGGTTCCGCCGCAACCAAGGACAATGCCGTCATCCGTCGGAGGAGGAG
FD970142       <-- AGTGGTTCCGCCGCAACCAAGGACAATGCCGTCATCCGTCGGAGGAGGAG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1301   -   1351
UN17390        --> GAGCAGAATCGATTGACGACGAAGAAGACATTCTCGTCCTGAAACTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- GAGCAGAATCGATTGACGACGAAGAAGACATTCTCGTCCTGAAACTCGTG
EX771823       <-- GAGCAGAATCGATTGACGACGAAGAAGACATTCTC------GTCCTCGTG
FD970142       <-- GAGCAGAATCGATTGACGACGAGGAAGACATTCTCGTCCTGAAACTCGTG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1351   -   1401
UN17390        --> AACTGACGACGGGAGGACGGGAGATAGACGCCGGAGAAGAGAGGAAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- AACTGACGACGGGAGGACGGGAGATAGACGCCGGAGAAGAGAGGAAGAGG
EX771823       <-- AACTGACGACGGGAGGACGGGAGATAGACGCCGGAGAAGAGAGGAAGAGG
FD970142       <-- AACTGACGACGGGAGGACGGGAGATAGACGCCGGAGAAGAGAGGAAGAGG
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1401   -   1451
UN17390        --> TGTGAGATGAGTGAAACACATCATCATTTTTTTTTCTTTGTATCTAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- ..................................................
EV536928       <-- TGTGAGATGAGTGAAACACATCATCATTTTTTTTTCTTTG..........
EX771823       <-- TGTGAGATGAGTGAAACACATCATCATTTTTTTT-CTTTGTATCTAATCT
FD970142       <-- TGTGAGATGAGTGAAACACATCATCATTTTTTTTTCTTTGTATCTAATCT
EW728497       --> ..................................................
FD530975       --> ..................................................
EX752360       --> ..................................................
EX751901       --> ..................................................
EX775907       --> ..................................................
EX752906       --> ..................................................
EV541272       --> ..................................................

               1451   -   1501
UN17390        --> GTGAGAGAGAGATTGAGTGAGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EW723840       <-- .........................
EV536928       <-- .........................
EX771823       <-- GTGAGAGAGAGATTGAGTGAGGTCC
FD970142       <-- GTGAGAGAGAGATTGAGTGAGGTCC
EW728497       --> .........................
FD530975       --> .........................
EX752360       --> .........................
EX751901       --> .........................
EX775907       --> .........................
EX752906       --> .........................
EV541272       --> .........................