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Alignment for radish unigene UN17399

               1      -     51
UN17399        --> GGGGGAGGGGCATATGGAGTTAGTCTCCGGTCTGGTCTGATTCGTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ..................................................
EY911277       <-- ..................................................
FD538470       <-- ..................................................
EY915816       --> GGGGGAGGGGCATATGGAGTTAGTCTCCGGTCTGGTCTGATTCGTAAAGA
EY915429       --> .........ggATATGGAGTTAGTCTCCGGTCTGGTCTGATTCGTAAAGA
EW714939       --> .....................ggagagtGGTCTGGTCTGATTCGTAAAGA
EX897540       --> .....................ggagagtGGTCTGGTCTGATTCGTAAAGA
FD542381       --> .....................ggagattGGTCTGCTCTGATTCGTAAAGA
FD973635       --> .....................ggagagtGGTCTGCTCTGATTCGTAAAGA
EX771717       --> ..................................................
FD543565       --> ..................................................

               51     -    101
UN17399        --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ..................................................
EY911277       <-- ..................................................
FD538470       <-- ..................................................
EY915816       --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
EY915429       --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
EW714939       --> ACGATGCCATTGTCCGCATCAATATCATCGCCGTCTTCTCTCGTTCTTCT
EX897540       --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
FD542381       --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
FD973635       --> ACGATGCCACTGTCCGCATCAATATCATCGCCGTCTTCTCTCGCTCTTCT
EX771717       --> .......................................gTCGTTCTTCT
FD543565       --> ..................................................

               101    -    151
UN17399        --> CTCAACCCGATCACGATCGCCTCTCTCCTTCTTCATCTCCACTCCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ..................................................  Raphanus sativus var. oleiformis
EY911277       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> CTCAACCCGATCACGATCGTCTCTCTCCTTCTTCATCTCCACTCCCAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> CTCAACCCGATCACGATCGTCTCTCTCCTTCTTCATCTCCACTCCCAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> CTCAACCCGATCACGATCGCCTCTCTCCTTCTTCATCTCCACTCCCGGAA  Raphanus sativus var. oleiformis
EX897540       --> CTCAACCCGATCACGATCGTGCCTCTCCTTCTTCGTCTCCACTCCCAGAA  Raphanus sativus cv Early Scarlet Globe
FD542381       --> CTCAACCCGATCACGATCGCCTCTCTCCTTCTTCATCTCCACTCCCAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> CTCAACCCGATCACGATCGCCTCTCTCCTTCTTCATCTCCACTCCCAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> CTCAACCCGATCACGATCGCCTCTCTCCTTCTTCATCTCCACTCCCGGAA  Raphanus raphanistrum subsp. landra
FD543565       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN17399        --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCCTTCTACTTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ........ATCTCCAGAACCCCTGATCCTCCTC---CTTCTACTTCTCTT  Raphanus sativus var. oleiformis
EY911277       <-- ...............................................CTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCCTTCTACCTCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCCTTCTACCTCTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCT---TCTACTTCTCTT  Raphanus sativus var. oleiformis
EX897540       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCTTTCTACTTCTCTT  Raphanus sativus cv Early Scarlet Globe
FD542381       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCTTTCTACTTCTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCTCTTTCTACTTCTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> CCCTAATCATCTCCAGAACCCCTGATCCTCCTCCT---TCTACTTCTCTT  Raphanus raphanistrum subsp. landra
FD543565       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN17399        --> TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- TTTGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
EY911277       <-- TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGCTT
FD538470       <-- ..................................................
EY915816       --> TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGG-TGGCTT
EY915429       --> TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGCTT
EW714939       --> TTTGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
EX897540       --> TTCGCTTCCCGGCGACCCCGAGATTTCATCAACGGGAGGAGGGATGGTTT
FD542381       --> TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
FD973635       --> TTCGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
EX771717       --> TTTGCTTCCCGGCGACCCCGCGACTTCATCAACGGGAGGAGGGATGGTTT
FD543565       --> ..................................................

               251    -    301
UN17399        --> CGTGGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- CGTGGACGGTGATCGGAGCTGGAACAGGAAGATTAGACCGGAGTATGGGT
EY911277       <-- CGTGGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
FD538470       <-- ..................................................
EY915816       --> C-TGGACGGTG-TCGGAGCTGGAACCGG......................
EY915429       --> CGTGGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
EW714939       --> CGTGGACGGTGATCGGAGCTGGAACAGGAAGATTAGACCGGAGTATGGGT
EX897540       --> CGTGGACGGTGATCGGAGCTGGAACCGGAGGATCAGACCGGAGTATGGGA
FD542381       --> CGTAGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
FD973635       --> CGTAGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
EX771717       --> CGTGGACGGTGATCGGAGCTGGAACCGGAAGATCAGACCGGAGTATGGGA
FD543565       --> ..................................................

               301    -    351
UN17399        --> TCGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- TAGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG  Raphanus sativus var. oleiformis
EY911277       <-- TCGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- ..............GGAGATGACGAAGACGAGCAGGAGGAGGATGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> TCGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> TAGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG  Raphanus sativus var. oleiformis
EX897540       --> TCGATGAGGAATATGGAGAGGACGAAGACGAGCAGGAGGAGGAGGAAGAG  Raphanus sativus cv Early Scarlet Globe
FD542381       --> TCGATGAGGATTATGGAGATGACGAAGACGAGCAGGAGGAGGATGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> TCGATGAGGATTATGGAGATGACGAAGACGAGCAGGAGGAGGATGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> TCGATGAGGATTATGGAGAAGACGAAGACGAGCAGGAGGAGGATGAAGAG  Raphanus raphanistrum subsp. landra
FD543565       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN17399        --> GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- GAAGAAGATAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
EY911277       <-- GAAGAAGACAGAAGCTTGGATCTTTTACTTAGGTTCGTCGAGAATGTCTT
FD538470       <-- GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
EY915816       --> ..................................................
EY915429       --> GAAGAAGACAGAAGCTTGGATCTTTTACTTAGGTTCGTCGAGAATGTCTT
EW714939       --> GAAGAAGATAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
EX897540       --> GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
FD542381       --> GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
FD973635       --> GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
EX771717       --> GAAGAAGACAGAAGCTTGGATCTTTTGCTTAGGTTCGTCGAGAATGTCTT
FD543565       --> ..................................................

               401    -    451
UN17399        --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
EY911277       <-- CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
FD538470       <-- CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
EY915816       --> ..................................................
EY915429       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
EW714939       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
EX897540       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
FD542381       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
FD973635       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
EX771717       --> CAGAAAAGTCTCCAAGAGAGCTAGGAAAGCCGTCCGATCTGTTTTGCCTG
FD543565       --> ..............................................gCTG

               451    -    501
UN17399        --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACCTATA
EY911277       <-- TTTCCATCTCCACCAAGCTGGTGGGTTTCTCAGTGAACGGTGTACTTATA
FD538470       <-- TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
EY915816       --> ..................................................
EY915429       --> TTTCCATCTCCACCAAGCTGGTGGGTTTCTCAGTGAACGGTGTACTTATA
EW714939       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACCTATA
EX897540       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
FD542381       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
FD973635       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
EX771717       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA
FD543565       --> TTTCCATCTCCACCAAGCTGGTGGGATTCTCAGTGAACGGTGTACTTATA

               501    -    551
UN17399        --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGCACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCAAGGTAGCTTGCACACT  Raphanus sativus var. oleiformis
EY911277       <-- CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGTACGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGCACGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGTACGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCAAGGTAGCTTGCACACT  Raphanus sativus var. oleiformis
EX897540       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGTACGCT  Raphanus sativus cv Early Scarlet Globe
FD542381       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGCACGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGCACGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> CTTGCATTTTTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGTACGCT  Raphanus raphanistrum subsp. landra
FD543565       --> CTTGCATTTCTGTGGATCTTGAAGGCCTTTCTCGAGGTAGCTTGCACGCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN17399        --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- TGGGACTATTGTATTTACGAGCATTCTACTTATACGGGGACTTTGGGCTG
EY911277       <-- TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
FD538470       <-- TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
EY915816       --> ..................................................
EY915429       --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
EW714939       --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGGGGACTTTGGGCTG
EX897540       --> TGGGACTATTGTATTTACGAGCATTCTACTAATACGAGGACTTTGGGCTG
FD542381       --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
FD973635       --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG
EX771717       --> TGGGACTATTGTATTTACGAGCATTCTACTAATACGAGGACTTTGGGCTG
FD543565       --> TGGGACTATTGTATTTACGAGCATTCTACTTATACGAGGACTTTGGGCTG

               601    -    651
UN17399        --> GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT  Raphanus sativus var. oleiformis
EY911277       <-- GTGTAGCATACGTACAAGAAAGCCGCAACAACCGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACCGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT  Raphanus sativus var. oleiformis
EX897540       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACCGGATCAATGAACTTGCT  Raphanus sativus cv Early Scarlet Globe
FD542381       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> GTGTAGCATACGTACAAGAAAGCCTCAACAACCGGATCAATGAACTTGCT  Raphanus raphanistrum subsp. landra
FD543565       --> GTGTAGCATACGTACAAGAAAGCCGCAACAACAGGATCAATGGACTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17399        --> GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus sativus var. oleiformis
EY911277       <-- GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- GATGACCCACGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus sativus var. oleiformis
EX897540       --> GATGACCCCCGTGCATGGGAACGGGGTGCAACCAGCTTCTTGATTAATTC  Raphanus sativus cv Early Scarlet Globe
FD542381       --> GATGACCCACGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> GATGACCCACGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> GATGACCCCCGTGCATGG-AACGGGGTGCAACCAGCTTCTTGATTAATTC  Raphanus raphanistrum subsp. landra
FD543565       --> GATGACCCACGTGCATGG-AACGGGGTGCAACCAGCGTCATGATTAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN17399        --> ACTATGTGCTTCA-AAAAACCAAGTTTCTGACTTCTTGGAAGACAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ACTTAGTGCTTCA-AAAAACCAAGTTTCTGACTTCTTGGAAGACAATAAA  Raphanus sativus var. oleiformis
EY911277       <-- ACTATGTGCTTCAGAAAAAACAAGTTTCTGACTTCTTGGAAGACAATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538470       <-- ACTATGTGCTTCA-AAAAACCAAGTTTCTGACTTCTTGGAAGACAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915429       --> ACTATGTGCTTCA-GAAAAACAAGTTTCTGACTTCTTGGAAGACA-T-AA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714939       --> ACTTAGTGCTTCA-AAAAACCAAGTTTCTGACTTCTTGGAAGACAATAAA  Raphanus sativus var. oleiformis
EX897540       --> GCTTTGTGCTTCG-AAAAcca.............................  Raphanus sativus cv Early Scarlet Globe
FD542381       --> ACTATGTGCTTCA-AAAA................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973635       --> ACTATGTGCTTCA-AAAA-CCAAGTTTCTGACTTCTTGGA-GACA-TAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771717       --> GCTTTGTGCTTCG-AAAAACCAAGTTTCTGACTTCTgaaagccaaaattg  Raphanus raphanistrum subsp. landra
FD543565       --> ACTATGTGCTTCA-AAAAACCAAGTTTCTGACTTCTTGGAAGACAATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN17399        --> ACCACAGATGATTATACAATCAGAAAGGAGTGAGTATATGATGTCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ACCACAGATGATTATACAATCAGAAAGGAGTGAGTATATGATGTCCTTTG
EY911277       <-- ACCACAGATGATTATACAATCAGAAAGGAGTGAGTATATGATGTCCTTTG
FD538470       <-- ACCACAGATGATTATACAATCAGAAAGGAGTGAGTATATGATGTCCTTTG
EY915816       --> ..................................................
EY915429       --> ACCACAGATGAT-ATACA-TCAGAA.........................
EW714939       --> ACCACAGATGATTATACAATC.............................
EX897540       --> ..................................................
FD542381       --> ..................................................
FD973635       --> -CCACAGATGATTATACA-TCAGAAAG-AGTGAGTATATGA.........
EX771717       --> att...............................................
FD543565       --> ACCACAGATGATTATACAATCAGAAAGGAGTGAGTATATGATGTCCTTTG

               801    -    851
UN17399        --> GCATTGTCTGATGATTTAGTAAGTAAAAGAATGTAATGTTTGTAGCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- GCATTGTCTGATGATTTAGTAAGTAAAAGAATGTAATGTTTGTAGCATTG
EY911277       <-- GCATTGTCTGATGATTTAGTAAGTAAAAGAATGTAATGTTTGCAGCATTG
FD538470       <-- GCATTGTCTGATGATTTAGTAAGTAAAAGAATGTAATGTTTGTAGCATTG
EY915816       --> ..................................................
EY915429       --> ..................................................
EW714939       --> ..................................................
EX897540       --> ..................................................
FD542381       --> ..................................................
FD973635       --> ..................................................
EX771717       --> ..................................................
FD543565       --> GCATTGTCTGATGATTTAGTAAGTAAAAGAATGTAATGTTTGTAGCATTG

               851    -    901
UN17399        --> TCCAATTAAATGGGATTCGGTGACACTGTA-T-CTTAGTTTTCCAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- TCCAATTAAATGGGATTCGGTGACACTGTA-TGCTTAGTTTTCCAAATAA
EY911277       <-- TCTAATTAAATGGGATTCGGTGACACTGTAAT-CTTAGTTTTCCAAATAA
FD538470       <-- TCCAATTAAATGGGATTCGGTGACACTGTA-T-CTTAGTTTTCCAAATAA
EY915816       --> ..................................................
EY915429       --> ..................................................
EW714939       --> ..................................................
EX897540       --> ..................................................
FD542381       --> ..................................................
FD973635       --> ..................................................
EX771717       --> ..................................................
FD543565       --> TCCAATTAAATGGGATTCGGTGACACTGTA-T-CTTAGTTTTCCAAATAA

               901    -    951
UN17399        --> ACAAAACCATAATACAGTATCATACCATTTACCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW719132       <-- ACAAAACCATAATACAGAATC................
EY911277       <-- ACAATACC.............................
FD538470       <-- ACAAAACCATAATACAGTATCATACCATTTACCTTTC
EY915816       --> .....................................
EY915429       --> .....................................
EW714939       --> .....................................
EX897540       --> .....................................
FD542381       --> .....................................
FD973635       --> .....................................
EX771717       --> .....................................
FD543565       --> ACAAAACCATAATACAGTATCg...............