RadishBase

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Alignment for radish unigene UN17434

               1      -     51
UN17434        --> GGATCTGCGCCGCACTCTCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- GGATTTGCGCCGCACTCTCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
EW728036       <-- ..................................................
FD934154       <-- ..................................................
FD536931       <-- ..................................................
EX893500       <-- ..................................................
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> GGATCTGCGCCGCACT-T-TCTCTCTCTCAGATTGATTCCTCCCAAAATC
FD532439       --> GGATCTGCGCCGCACTCTCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
EV528720       --> ....ggGCGCCGCACTCTCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
EV549796       --> ....ggGCGCCGCACTCTCTCTCTCTC--AGATTGATTCCTCCCAAAATC
EY897978       --> ...gggGCGCCGCACTCTCTCTCTCTC--AGATTGATTCCTCCCAAAATC
EY901289       --> ....ggGCGCCGCACTCTCTCTCTCTC--AGATTGATTCCTCCCAAAATC
EV527636       --> ......ggGCCGCACTCTCTCTCCCTCTCAGATTGATTCCTCCCAAAATC
FD964103       --> ...........GCACTCTCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
FD937558       --> .......ggggcgccgcaCTCTCTCTCTCAGATTGATTCCTCCCAAAATC
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               51     -    101
UN17434        --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
EW728036       <-- ..................................................
FD934154       <-- ..................................................
FD536931       <-- ..................................................
EX893500       <-- ..................................................
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
FD532439       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
EV528720       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAG---CAATCATGGCGGACGAG
EV549796       --> AACCCTTCTCCCCCAAAGTTAATTT--CAG---CAATCATGGCGGACGAG
EY897978       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
EY901289       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTGGCAATCATGGCGGACGAG
EV527636       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
FD964103       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
FD937558       --> AACCCTTCTCCCCCAAAGTTAATTTTTCAGTAGCAATCATGGCGGACGAG
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               101    -    151
UN17434        --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EW728036       <-- ..................................................
FD934154       <-- ..................................................
FD536931       <-- ..................................................
EX893500       <-- ..................................................
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
FD532439       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EV528720       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EV549796       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EY897978       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EY901289       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
EV527636       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
FD964103       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
FD937558       --> AATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGA
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               151    -    201
UN17434        --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
EW728036       <-- ..................................................
FD934154       <-- ..................................................
FD536931       <-- ..................................................
EX893500       <-- ..................................................
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> CCCAACCAAGAAGAAGAAGAAGAAGAAGAAAGTTGTCCTTCAAGATCCCA
FD532439       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
EV528720       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
EV549796       --> CCCAACCAAGAAGAAGAAGAAGAA------AGTTGTCCTTCAAGATCCCA
EY897978       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
EY901289       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
EV527636       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
FD964103       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
FD937558       --> CCCAACCAAGAAGAAGAAGAAGAAGAA---AGTTGTCCTTCAAGATCCCA
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               201    -    251
UN17434        --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCC
EW728036       <-- .................................................T
FD934154       <-- ..................................................
FD536931       <-- ..................................................
EX893500       <-- ..................................................
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> TCGAGGAACCAACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
FD532439       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCC
EV528720       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
EV549796       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATCCATTGCCTGCT
EY897978       --> TCGAGGAACCTACTGAGACACCGGCCGAGCCATCTGATTCTTTGCCTGCT
EY901289       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
EV527636       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
FD964103       --> TCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
FD937558       --> TCGAGGAACCAACTGAGTCACCGGCCGAGCCATCTGATTCTTTGCCTGCT
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               251    -    301
UN17434        --> AATGATGGTGGCCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- AATGAT---GGCCTTGACGGTCCATCTTTCGGAACC..............
EW728036       <-- AATGATGGCGGCCTTGACGGTCCATCTTTTGGAACAAAGAAGAAAAAGAA
FD934154       <-- .................CGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
FD536931       <-- ..................................................
EX893500       <-- ................................................aa
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> AATGATGGTGGCCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
FD532439       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACC..............
EV528720       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
EV549796       --> AATGATGGTGGTCTTGACGGTACATCTTTCGGAACCAAGAAGAAAAAGAA
EY897978       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACCAAGAGGAAAAAGAA
EY901289       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
EV527636       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
FD964103       --> AATGATGG---CCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
FD937558       --> AATGATGGTGGCCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAA
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> ..................................................

               301    -    351
UN17434        --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- GAAGAAGCCTGTTGAATCAAGCTCACTGGATGAAGAAACTGCTGATGCTC  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- GAAGAAGCCTGTTGAATCAAGCTCATTGGATGAAGAAACTGCTGATGCTC  Raphanus sativus var. oleiformis
FD536931       <-- ..............AATCAAACTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- aagagagaagctgtgATCAAGCTCATTGGATGAAGAAACTGCTGATGCTC  Raphanus sativus var. oleiformis
FD539756       <-- ...............................GATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV545192       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- ..................................................  Raphanus sativus cv GSK3-1
EY936388       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGAAGAAACTGCTGATGCTC  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. maritimus
EV549796       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGAAGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. maritimus
EY901289       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. maritimus
EV527636       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. maritimus
FD964103       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGATGAAAGTGTCGATGCTC  Raphanus raphanistrum subsp. maritimus
FD937558       --> GAAGAAGCCTGTTGAATCAAGCTCATTGGATGAAGAAACTGCTGATGCTC  Raphanus sativus var. oleiformis
FD972032       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX886951       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN17434        --> CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAGGGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCGGAAGGAATT  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAAGGAATT  Raphanus sativus var. oleiformis
FD536931       <-- CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAAGGAATT  Raphanus sativus var. oleiformis
FD539756       <-- CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- ......................................GCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
EV545192       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- ..................................................  Raphanus sativus cv GSK3-1
EY936388       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAAGGAATT  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
EV549796       --> CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
EY901289       --> CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
EV527636       --> CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
FD964103       --> CAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCAGAGGGAATT  Raphanus raphanistrum subsp. maritimus
FD937558       --> CAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGAGGCAGAAGGAATT  Raphanus sativus var. oleiformis
FD972032       --> ......................................GCAGAGGGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX886951       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN17434        --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD934154       <-- TATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD536931       <-- GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGAA
EX893500       <-- GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD539756       <-- GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD960215       <-- GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EV545192       <-- ........................................GTGATAGGGA
FY442915       <-- ..................................................
EY936388       <-- ..................................................
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD532439       --> ..................................................
EV528720       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EV549796       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EY897978       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EY901289       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EV527636       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD964103       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD937558       --> TATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
FD972032       --> GATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGA
EY940663       --> ..................................................
EX886951       --> ..................................................

               451    -    501
UN17434        --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- TTACATTTATGACGAGCTTCTTGGTAGAGTCTTCAACATTCTCCGTGAGA  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- TTATATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus sativus var. oleiformis
FD536931       <-- TTACATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- TTATATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus sativus var. oleiformis
FD539756       <-- TTACATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
EV545192       <-- TTACATTTATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- ..................................................  Raphanus sativus cv GSK3-1
EY936388       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> TTATATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
EV549796       --> TTACATTTATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
EY901289       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
EV527636       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
FD964103       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTCAACATCCTCCGTGAGA  Raphanus raphanistrum subsp. maritimus
FD937558       --> TTATATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus sativus var. oleiformis
FD972032       --> TTACATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX886951       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN17434        --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- ACAATCCGGAGCTTGTTGGAGAAAGGCGTCGTACTGTTATGAGGCCTCCC
FD934154       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD536931       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EX893500       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD539756       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD960215       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EV545192       <-- ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FY442915       <-- ..........GCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EY936388       <-- .......................................gGAGGCCTCCC
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD532439       --> ..................................................
EV528720       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EV549796       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EY897978       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EY901289       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EV527636       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD964103       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD937558       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
FD972032       --> ACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCC
EY940663       --> .......................................gGAGGCCTCCC
EX886951       --> .........................................gGGCCTCCC

               551    -    601
UN17434        --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD934154       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD536931       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTCATGGA
EX893500       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD539756       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTCATGGA
FD960215       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EV545192       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FY442915       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EY936388       <-- CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD968653       <-- ..............AGGGACAAAGAAGACAGTGTTTGTCAACTTCATGGA
EY934606       <-- ..................................................
FD968011       <-- ..................................................
EX889860       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD532439       --> ..................................................
EV528720       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EV549796       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EY897978       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EY901289       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EV527636       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD964103       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD937558       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
FD972032       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTCATGGA
EY940663       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA
EX886951       --> CAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGA

               601    -    651
UN17434        --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus var. oleiformis
FD536931       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus var. oleiformis
FD539756       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. maritimus
EV545192       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus cv GSK3-1
EY936388       <-- CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- ...............................................TGC  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> CCTTTGCAAGACGATGCATCGTCAACCGG.....................  Raphanus raphanistrum subsp. maritimus
EV549796       --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. maritimus
EY901289       --> CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. maritimus
EV527636       --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. maritimus
FD964103       --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. maritimus
FD937558       --> CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus var. oleiformis
FD972032       --> CCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus cv Early Scarlet Globe
EX886951       --> CCTTTGCAAGACAATGCATCGTCAACCGGACCATGTGATGAATTTCTTGC  Raphanus sativus var. oleiformis

               651    -    701
UN17434        --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGTT  Raphanus sativus var. oleiformis
FD536931       <-- TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGTT  Raphanus sativus var. oleiformis
FD539756       <-- TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. maritimus
EV545192       <-- TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus sativus cv GSK3-1
EY936388       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGTT  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- .................AGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGT-  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549796       --> TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGC..............  Raphanus raphanistrum subsp. maritimus
EY901289       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTg  Raphanus raphanistrum subsp. maritimus
EV527636       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. maritimus
FD964103       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGAT-GGTT  Raphanus raphanistrum subsp. maritimus
FD937558       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGAT-GGTT  Raphanus sativus var. oleiformis
FD972032       --> TTGCTGAGTTGGGAACAAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGTT  Raphanus sativus cv Early Scarlet Globe
EX886951       --> TTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGACAGCAAAGATTGGTT  Raphanus sativus var. oleiformis

               701    -    751
UN17434        --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD934154       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD536931       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EX893500       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD539756       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD960215       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EV545192       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTCTGCGTCGTTA
FY442915       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EY936388       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD968653       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EY934606       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD968011       <-- GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EX889860       --> GTCAAGGGA-GATTTGCACCCAAGAATTT-GAGGG...............
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTCTGCGTCGTTA
EY897978       --> ..................................................
EY901289       --> t.................................................
EV527636       --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
FD964103       --> GT................................................
FD937558       --> GTCAAGGGA-GATTTGCACCCA-G-ATTTTGAGGGGATTT-GCGTCGT-A
FD972032       --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EY940663       --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA
EX886951       --> GTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTA

               751    -    801
UN17434        --> TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus var. oleiformis
FD536931       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGTAAGAGCCCTGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus var. oleiformis
FD539756       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGTAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. maritimus
EV545192       <-- CGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus cv GSK3-1
EY936388       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGTAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- TGTCACTGAGTACGTCATTTGCCTTGGTTGTAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> ..................................................  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549796       --> CGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY901289       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527636       --> TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. maritimus
FD964103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD937558       --> TGTCACTGAGTACGTCAT................................  Raphanus sativus var. oleiformis
FD972032       --> TGTCACTGAGTACGTCATTTGCCTTGGTTGTAAGAGCCCGGACACAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus cv Early Scarlet Globe
EX886951       --> TGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGCCCGGACACAATTC  Raphanus sativus var. oleiformis

               801    -    851
UN17434        --> TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
FD934154       <-- TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTAGATCT
FD536931       <-- TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGAAGTGTGGATCT
EX893500       <-- TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGAAGTGTGGATCT
FD539756       <-- TCTCAAAGGAGAAT....................................
FD960215       <-- TCTCAAAGGAGAATCGTTTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
EV545192       <-- TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
FY442915       <-- TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGAAGTGTGGATCT
EY936388       <-- TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCTAGAAGTGTGGATCT
FD968653       <-- TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
EY934606       <-- TCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
FD968011       <-- TCTCAAAGGAGAATTGTTTCTTCTTTTTCAGATGCGAGAAGTGTGGATCT
EX889860       --> ..................................................
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> TCT...............................................
EY897978       --> ..................................................
EY901289       --> ..................................................
EV527636       --> TCTC..............................................
FD964103       --> ..................................................
FD937558       --> ..................................................
FD972032       --> TCTCAAAGGAGAATTGTCTCTTCTTTCTCAGATGCGAGAAGTGTGGATCT
EY940663       --> TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCTAGAAGTGTGGATCT
EX886951       --> TCTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGAAGTGTGGATCT

               851    -    901
UN17434        --> GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- TGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
FD934154       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
FD536931       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EX893500       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGCTGGTCG
FD539756       <-- ..................................................
FD960215       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EV545192       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
FY442915       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EY936388       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
FD968653       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EY934606       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
FD968011       <-- GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EX889860       --> ..................................................
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> ..................................................
EY897978       --> ..................................................
EY901289       --> ..................................................
EV527636       --> ..................................................
FD964103       --> ..................................................
FD937558       --> ..................................................
FD972032       --> GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EY940663       --> GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG
EX886951       --> GGACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCG

               901    -    951
UN17434        --> CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
FD934154       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
FD536931       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EX893500       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
FD539756       <-- ..................................................
FD960215       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EV545192       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
FY442915       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EY936388       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGCGGTCTTTTTGTTTTG
FD968653       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EY934606       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
FD968011       <-- CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EX889860       --> ..................................................
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> ..................................................
EY897978       --> ..................................................
EY901289       --> ..................................................
EV527636       --> ..................................................
FD964103       --> ..................................................
FD937558       --> ..................................................
FD972032       --> CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG
EY940663       --> CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGCGGTCTTTTTGTTTTG
EX886951       --> CAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGTCTTTTTGTTTTG

               951    -   1001
UN17434        --> GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- GGATACTACAGAGCTTGTTATGCAGTTGAAATACTTTTGTTGTTGTTTTT
FD934154       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
FD536931       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
EX893500       <-- GGAAACTGCAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
FD539756       <-- ..................................................
FD960215       <-- GGATACTACAGAGCTTGTTATGCAGTTGAAATACTTTTGCTGTTTTTTTT
EV545192       <-- GGATACTACAGAGCTTGTTATGCAGTTGAAATACTTTTGTTGTTTTTTTT
FY442915       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCAGTGTTGTTTTTTTT
EY936388       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
FD968653       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
EY934606       <-- GGATACTACAGAGCTTGTTATGCAGTTGAAATACTCTTGTTGTTGTTTTT
FD968011       <-- GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
EX889860       --> ..................................................
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> ..................................................
EY897978       --> ..................................................
EY901289       --> ..................................................
EV527636       --> ..................................................
FD964103       --> ..................................................
FD937558       --> ..................................................
FD972032       --> GGAAACTACAGAGCT...................................
EY940663       --> GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT
EX886951       --> GGAAACTACAGAGCTTGTTATGCAGTTGAAATACCTGTGTTGTTTTTTTT

               1001   -   1051
UN17434        --> T-GTTTTTTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- --GTTTTGTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- TTGTTTTTTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus var. oleiformis
FD536931       <-- T-GTTTTTTTT---GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- T-GTTTTTTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus var. oleiformis
FD539756       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- --GTTTTGTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus raphanistrum subsp. maritimus
EV545192       <-- --GTTTTGTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- T-GTTTTTTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus cv GSK3-1
EY936388       <-- T-GTTTTTTTTTTTGTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- T-GTTTTTTTT---GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- --GTTTTGTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- T-GTTTTTTTT---GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> ..................................................  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549796       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY901289       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527636       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD937558       --> ..................................................  Raphanus sativus var. oleiformis
FD972032       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> T-GTTTTTTTTTTTGTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus cv Early Scarlet Globe
EX886951       --> --GTTTTTTTTT--GTTATTGTTTCTGAATGTGAGCAATAATCTGGAGAC  Raphanus sativus var. oleiformis

               1051   -   1101
UN17434        --> -AAGATTTCACATCAAATATGATCAAAACCTTCTACTTTGTTAGAT-CAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW728036       <-- -AAGATTTCACAcc....................................  Raphanus sativus cv Early Scarlet Globe
FD934154       <-- TAAGATTTCACATCAAATATGATCAAAACCCTCTACTTTGTT........  Raphanus sativus var. oleiformis
FD536931       <-- -AAGATTTCACGTCAAATATGATCAAAACCTTCTACTTTGTTAGATTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893500       <-- TAAGATTTCACATCAAATATGATCAAAACCCTCTACTTTGTTAGAT-CAT  Raphanus sativus var. oleiformis
FD539756       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960215       <-- -AAGATTTCACATCAAATATGATCAAAACCTTCTACc.............  Raphanus raphanistrum subsp. maritimus
EV545192       <-- -AAGATTTCACATCAAATATGATCAAAACCTT-TACTTTGTTAGAT-C..  Raphanus raphanistrum subsp. raphanistrum (NY)
FY442915       <-- TAAGATTTCACATCAAAT................................  Raphanus sativus cv GSK3-1
EY936388       <-- CAAGATTTCACATCAAATATGATCAAAACCCTCTACTTTGTTAGAT-CAT  Raphanus sativus cv Early Scarlet Globe
FD968653       <-- -AAGATTTCACATCAAATATGATCAAAACCTTTTACTTTGTTAG......  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934606       <-- -AAGATTTCACATCAAATATGATCAGAACCTTCTACT.............  Raphanus sativus cv Early Scarlet Globe
FD968011       <-- -AAGATTTCACATCAAATATGATCAAAACCTTCTACTTTGTTAGATTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889860       --> ..................................................  Raphanus sativus var. oleiformis
FD532439       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV528720       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549796       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897978       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY901289       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527636       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964103       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD937558       --> ..................................................  Raphanus sativus var. oleiformis
FD972032       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940663       --> CAAGATTTCACATCAAATATGATCAAAACCCTCTACTTTGT.........  Raphanus sativus cv Early Scarlet Globe
EX886951       --> TAAGATTTCACATCAAATATGATCAAAACCCTCTACTTTGTTAGAT-CAT  Raphanus sativus var. oleiformis

               1101   -   1151
UN17434        --> GTGGGTCACTTGAATTCTTGAAGT-TCTTTTGCTTTCAGTCAGTGCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- ..................................................
EW728036       <-- ..................................................
FD934154       <-- ..................................................
FD536931       <-- GTGGGTCACTAAAATCCATGGAGTGTCTTTTtactttc............
EX893500       <-- GTGGGTCACTTGAATTCTTGAAGT-TCTTTTGCTTcc.............
FD539756       <-- ..................................................
FD960215       <-- ..................................................
EV545192       <-- ..................................................
FY442915       <-- ..................................................
EY936388       <-- GTGGGTCACTTGAATTCTTGAAGT-TCTTTTGCTTTCAGTCAGTGCTCTT
FD968653       <-- ..................................................
EY934606       <-- ..................................................
FD968011       <-- GTGGGTCACTAAAATCCATGGAGTGTCTTTTtacttcc............
EX889860       --> ..................................................
FD532439       --> ..................................................
EV528720       --> ..................................................
EV549796       --> ..................................................
EY897978       --> ..................................................
EY901289       --> ..................................................
EV527636       --> ..................................................
FD964103       --> ..................................................
FD937558       --> ..................................................
FD972032       --> ..................................................
EY940663       --> ..................................................
EX886951       --> GTGGGTCACTTGAATTCTTGAAGT-TCTTTTGCT................

               1151   -   1201
UN17434        --> CCTCATGCAAAGCTTATTCATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
FD528913       <-- .........................
EW728036       <-- .........................
FD934154       <-- .........................
FD536931       <-- .........................
EX893500       <-- .........................
FD539756       <-- .........................
FD960215       <-- .........................
EV545192       <-- .........................
FY442915       <-- .........................
EY936388       <-- CCTCATGCAAAGCTTATTCATGTTC
FD968653       <-- .........................
EY934606       <-- .........................
FD968011       <-- .........................
EX889860       --> .........................
FD532439       --> .........................
EV528720       --> .........................
EV549796       --> .........................
EY897978       --> .........................
EY901289       --> .........................
EV527636       --> .........................
FD964103       --> .........................
FD937558       --> .........................
FD972032       --> .........................
EY940663       --> .........................
EX886951       --> .........................