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Alignment for radish unigene UN17440

               1      -     51
UN17440        --> AACTATGAATAGTCTTGTGAGGTCATGAGTCATGACTCATGACTATACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AACTATGAATAGTCTTGTGAGGTCATGAGTCATGACTCATGACTATACGT
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               51     -    101
UN17440        --> ACCAGCAGAGAGAGAGAGAGAGATACATATAGCTCATTGCAAGTATGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> ACCAGCAGAGAGAGAGAGAGAGATACATATAGCTCATTGCAAGTATGTAT
EV546017       --> ..............................AGCTCATTGCAAGTATGTAT
FD544855       --> ..............................AGCTCATTGCAAGTATGTAT
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               101    -    151
UN17440        --> AACATATAGTTCTCCTAGAGAAACAGATCGTCGATCCATTTCATTTTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AACATATAGTTCTCGTAGAGAAACAGATCGTCGATCCATTTCATTTTGCG
EV546017       --> AACATATAGTTCTCCTAGAGAAACAGATCGTCGATCCATTTCATTTTGCG
FD544855       --> AACATATAGTTCTCCTAGAGAAACAGATCGTCGATCCATTTCATTTTGCG
FD976739       --> .....................AACAGATCGTCGATCCATTTCATTTTGCG
FD977106       --> ..........................ATCGTCGATCCATTTCATTTTGCG
EY933989       --> ..................................................

               151    -    201
UN17440        --> GTTTTATTGTTGTCATCTAGAAACTGACTTGTAATAGAAGTTACATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> GTTTTATTGTTGTCATCTAGAAACTGACTTGTAATAGAAGTTACATGAGG
EV546017       --> GTTTTATTGTTGTCATCTAGAAACTGACTTGTAATAGAAGTTACATGAGG
FD544855       --> GTTTTATTGTTGTCATCTAGAAACTGACTTGTAATAGAAGTTACATGAGG
FD976739       --> GTTTTATTGTTGTCATCTAAAAACTGACTTGTAATAAAAGTTACATGAGG
FD977106       --> GTTTTATTGTTGTCATCTAAAAACTGACTTGTAATAAAAGTTACATGAGG
EY933989       --> ...........GTCATC-AGAAACTGACTTGCAATAGAAGTTACATGAGG

               201    -    251
UN17440        --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTA-------G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTA-------G
EV546017       --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTA-------G
FD544855       --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTA-------G
FD976739       --> AGAGGTTCTAAAAGCTCGGAACTCCGAAACCCCTTATCACTA-------G
FD977106       --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTA-------G
EY933989       --> AGAGGTTCTAAGAGCTCGGAACTCCGAAACGCCTTATCACTACTCACTAG

               251    -    301
UN17440        --> TCAAAACTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> TCAAAAGTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTCTGTT
EV546017       --> TCAAAACTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTCTGTT
FD544855       --> TCAAAACTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTCTGTT
FD976739       --> TCAAAACTTGGG......................................
FD977106       --> TCAAAACTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTATGTT
EY933989       --> TCAAAAGTTGGGAGAGATTAGTATGTTCATCTTGCAACTTCAGGTCTGTT

               301    -    351
UN17440        --> GCTTCTTCTTGATAGTCCTCGGATTTCCCCCAGAGAACAATGTAGAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> GCTTCTTCTTGATAGTCCTCGGATTTCCCCCAGAGAACAATGTAGAGTCC
EV546017       --> GCTTCTTCTTGATAGTCCTCGGATTTCCCCCAGAGAACAATGTAGAGTCC
FD544855       --> GCTTCTTCTTGATAGTCCTCGGATTTCCCCCAGAGAACAATGTAGAGTCC
FD976739       --> ..................................................
FD977106       --> GCTTCTTCTTGATAGTCCTCGGATTTCCCCCAGAGAACAATGTAGAGTCC
EY933989       --> GCTTCTTCTTGATAGTCCTCGGATTTGCCCCAGAGAACAATGTAGAGTCC

               351    -    401
UN17440        --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTCCGAGGTACGTCTTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTCCGAGGTACGTCTTCTCTT
EV546017       --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTCCGAGGTACGTCTTCTCTT
FD544855       --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTCCGAGGTACGTCTTCTCTT
FD976739       --> ..................................................
FD977106       --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTCCGAGGTACGTCTTCTCTT
EY933989       --> AAGGATGATAGCCAAAGCGCCTAGCAAGCTTGCGAGGTACGTCTTCTCAT

               401    -    451
UN17440        --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAGAAAGAGGGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAGAAAGAGGGTTA
EV546017       --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAGAAAGAGGGTTA
FD544855       --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAGAAAGAGGGTTA
FD976739       --> ..................................................
FD977106       --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAAAAAGAGGGTTA
EY933989       --> TTAAATACAAAGCACCAAAGAAAGTGACTATGACCGTAGAAAGAGGATTG

               451    -    501
UN17440        --> AAGAGAGCAGAAAAAAGAGGTCCTTTCTGCGACACGCACCAAGCTTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ..................................................
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AAGAGAGCAGAAAAAAGAGGTCCTTTCCGCGACACGCACCAAGCTTGTAG
EV546017       --> AAGAGAGCAGAAAAAAGAGGTCCTTTCTGCGACACGCACCAAGCTTGTAG
FD544855       --> AAGAGAGCAGAGAAAAGAGGTCCTTTCTGCGACACGCACCAAGCTTGTAG
FD976739       --> ..................................................
FD977106       --> AAGAGAGCAAAAAAAAAAGGTCCTTTCTGCGACACGCACCAAGCTTGTAA
EY933989       --> AAGAGTGCAGAAAAAAGAGGTCCTTTCCGCGACACGCACCAAGCTTGTAG

               501    -    551
UN17440        --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCATGAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ............................GAGTACACACAGCACGAGAGCT
EV550798       <-- ..................................................
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCATGAGAGCT
EV546017       --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCATGAGAGCT
FD544855       --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCATGAGAGCT
FD976739       --> ..................................................
FD977106       --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCATGAGAGCT
EY933989       --> AAAGAAAAACACAGCCAACTGGAGTCCAGAGTACACACAGCACGAGAGCT

               551    -    601
UN17440        --> TCAATGAGGAATCAAGCTTCCAAGAATGTCAAGTCTGTGTTGCCTAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- -CAATGAGGA-TCAAGCTTCCAAGAATGT-AAGTCTGTGT-G-CTAAGGC  Raphanus sativus cv Early Scarlet Globe
EV550798       <-- .............................................AAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956270       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD980932       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981328       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD952187       --> TCAATGAGGAATCAAGCTTCCAAGAATGT-AAGTCTGTGTTGCCTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV546017       --> TCAATGAGGAATCAAGCTTCCAAGAAT-TCAAGTCTGTGTTGCCTAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544855       --> TCAATGAGGAATCAAGCTTCCAAGAAT-TCAAGTCTGTGTTGCCTAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976739       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977106       --> TCAATGAGGAATCAAGCTTCCAAGAAT-TCAAGTCTGTGTTGCCTAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933989       --> TCAATGAGGAATCAAGCTTCCAAGAATGT-AAGTCTGTGTTGCCTAAGGC  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN17440        --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- GAGAGCCATGAGGAAAGAGGCTATG-TAGCCATGAAACAAGTCCAGGAGG
EV550798       <-- GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
FD956270       <-- ..................................................
FD980932       <-- ..................................................
FD981328       <-- ..................................................
FD548709       <-- ..................................................
FD952187       --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
EV546017       --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
FD544855       --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
FD976739       --> ..................................................
FD977106       --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG
EY933989       --> GAGAGCCATGAGGAAAGAGGCTATGGTAGCCATGAAACAAGTCCAGGAGG

               651    -    701
UN17440        --> TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACATGAAGGATC
EV550798       <-- TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC
FD956270       <-- ..........................................GAAGGATC
FD980932       <-- ............................................AGGATC
FD981328       <-- ............................................AGGATC
FD548709       <-- ..................................................
FD952187       --> TAGTGTACAAGTGA....................................
EV546017       --> TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC
FD544855       --> TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC
FD976739       --> ..................................................
FD977106       --> TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC
EY933989       --> TAGTGTACAAGTGATCAGGACAATGAACGGCAATGTTAACCTGAAGGATC

               701    -    751
UN17440        --> AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
EV550798       <-- AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAGGCAGCCTAG
FD956270       <-- AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
FD980932       <-- AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
FD981328       <-- AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
FD548709       <-- ........GGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
FD952187       --> ..................................................
EV546017       --> AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAGGCAGCCTAG
FD544855       --> AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG
FD976739       --> ..................................................
FD977106       --> AACC..............................................
EY933989       --> AACCAGAAGGACCAAGCGAAGGTGCTAATGAGAAGAAAGAAGCAGCCTAG

               751    -    801
UN17440        --> TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
EV550798       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
FD956270       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
FD980932       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
FD981328       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGAGTTGAGCAGTTTAGGTC
FD548709       <-- TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
FD952187       --> ..................................................
EV546017       --> TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC
FD544855       --> TAACCAAGT.........................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> TAACCAAGTGTTGTTGTCTTGTTTCAGCAGGGTGTTGAGCAGTTTAGGTC

               801    -    851
UN17440        --> CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
EV550798       <-- CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
FD956270       <-- CTCTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
FD980932       <-- CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
FD981328       <-- CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
FD548709       <-- CTTTTAGAAAAAGTCATTGCCATGGCTCCTCCCACACACAC--ATGTTCC
FD952187       --> ..................................................
EV546017       --> CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> CTTTTAGAAAA-GTCATTGCCATGGCTCCTCCCACACACACACATGTTCC

               851    -    901
UN17440        --> TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
EV550798       <-- TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD956270       <-- TGTTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD980932       <-- TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD981328       <-- TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD548709       <-- TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD952187       --> ..................................................
EV546017       --> TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAATCCAA
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> TATTACTTTTGCAACACTTTTCAAACTTCTCTTTATCCTCTCAAA.....

               901    -    951
UN17440        --> CAATGATGGAGATGATGAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- CAATGATGGAGATGATGAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
EV550798       <-- CAATGATGGAGATGATGAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
FD956270       <-- CAATGATGGAGATGATAAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
FD980932       <-- CAATGATGGAGATGATGAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
FD981328       <-- CAATGATGGAGATGATGAAGGTGACGGCAGGAACAAGATTGGTCGTGGCA
FD548709       <-- CGATGATGGAGATGATGAAGGTGACGGCAGGAGCAAGATTGGTCGTGGCA
FD952187       --> ..................................................
EV546017       --> CAATGATG..........................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               951    -   1001
UN17440        --> GAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- GAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCTG
EV550798       <-- AAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCTG
FD956270       <-- GAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCCG
FD980932       <-- GAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCTG
FD981328       <-- GAAGCCATGGATGAAGAAGATAAGTCAATCCCTGCAAAATAAGCGTTCTG
FD548709       <-- GAAGCCATGGATGAAGAAGGTAAGTCAATCCCTGCAAAATAAGCGTTCTG
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1001   -   1051
UN17440        --> ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
EV550798       <-- ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
FD956270       <-- ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
FD980932       <-- ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
FD981328       <-- ATTCACAGTCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
FD548709       <-- ATTCACAGCCACACCAACAACAGCTGTGAAAGCCACCCACCAAAAGCCTC
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1051   -   1101
UN17440        --> TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
EV550798       <-- TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
FD956270       <-- TCGCTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
FD980932       <-- TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
FD981328       <-- TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
FD548709       <-- TCACTCCAAGAGAAGGTTTGCTTGCTTTCCTCCAAGTAAAGAAGAAAGAG
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1101   -   1151
UN17440        --> ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAAACGACGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAAACGACGAAAAC
EV550798       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAA-CGACGAAAAC
FD956270       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAAACGACAAAAAC
FD980932       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAAACGACGAAAAC
FD981328       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTAGACGGTAAACGACGAAAAC
FD548709       <-- ATGGGACAGATGAAGAGCGTAGCGATGGCTTGACGGTAAACGACGAAAAC
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1151   -   1201
UN17440        --> GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
EV550798       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
FD956270       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
FD980932       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
FD981328       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
FD548709       <-- GGCGGGACTGAGTCCATCCATGAAAGCAGCTTTGGTGAAGAGTGCAACTC
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1201   -   1251
UN17440        --> CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
EV550798       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
FD956270       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
FD980932       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
FD981328       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
FD548709       <-- CTGCCACTGTAAATTGCAGCAGCACCAACGTAATCGCTGGCTTGTATTTC
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1251   -   1301
UN17440        --> TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGTA
EV550798       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
FD956270       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
FD980932       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
FD981328       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
FD548709       <-- TCCATCTCCATCTCTCCTGCACCTCTCTCTAATTATTACTTTATTTGGGA
FD952187       --> ..................................................
EV546017       --> ..................................................
FD544855       --> ..................................................
FD976739       --> ..................................................
FD977106       --> ..................................................
EY933989       --> ..................................................

               1301   -   1351
UN17440        --> CATTCTATATCTTTGAATCCCACATAAGCTTCATTTTAGTGACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY937731       <-- CATTCTATATCTTTGAATAACACATAAGCTTCATTTTAGTGACCTCC
EV550798       <-- CATTCTATATCTTTGAATCC...........................
FD956270       <-- CATTCTATATCCTTGAATCC...........................
FD980932       <-- CATTCTATATCTTTGAATCC...........................
FD981328       <-- CATTCTATATCTTTGAATCC...........................
FD548709       <-- CATTCTATATCTTTGAATCC...........................
FD952187       --> ...............................................
EV546017       --> ...............................................
FD544855       --> ...............................................
FD976739       --> ...............................................
FD977106       --> ...............................................
EY933989       --> ...............................................