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Alignment for radish unigene UN17448

               1      -     51
UN17448        --> CTGCAGGAACAAAGCGGTGGCGAAAATAATACTAATGAACGTCATGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> CTGCAGGAACAAAGCGGTGGCGAAAATAATACTAATGAACGTCATGGTAT
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               51     -    101
UN17448        --> GAAGGTAGAGATACATTCGAAAGAGGAAGCGATTGGCGACTGCGACTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GAAGGTAGAGATACATTCGAAAGAGGAAGCGATTGGCGACTGCGACTGTG
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               101    -    151
UN17448        --> GTCACGATCTGGAGGAGACAGATGTTGGAGTATCATTTGATGTGAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GTCACGATCTGGAGGAGACAGATGTTGGAGTATCATTTGATGTGAGTTTA
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               151    -    201
UN17448        --> GCGTTCGAGGACAAGTTTGAATTCAATTCATGCTGGGTTGGGTCTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GCGTTCGAGGACAAGTTTGAATTCAATTCATGCTGGGTTGGGTCTGTAGC
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               201    -    251
UN17448        --> AAAAGGGGTTGTGCTTATCGTCCTATCTACTTTGGGAGATACCAAGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> AAAAGGGGTTGTGCTTATCGTCCTATCTACTTTGGGAGATACCAAGTCGC
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               251    -    301
UN17448        --> CGGTCAAATTTATTGTTTCATCGCCAAAAAATGCGACTCATTAATATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> CGGTCAAATTTATTGTTTCATCGCCAAAAAATGCGACTCATTAATATCAG
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               301    -    351
UN17448        --> TGGCGTTATTATTTAACTTTTATTGTATGGTTTCTAAGATTAAATAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> TGGCGTTATTATTTAACTTTTATTGTATGGTTTCTAAGATTAAATAAATT
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               351    -    401
UN17448        --> CTTGTCAGTTTTTTAGTTAAATCGACGACGTTACTGTTATAAGATATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> CTTGTCAGTTTTTTAGTTAAATCGACGACGTTACTGTTATAAGATATAGT
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               401    -    451
UN17448        --> TTTTGAGTATTGACATGTGGGTATCTTGTTAATGTAAATGGTGCAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> TTTTGAGTATTGACATGTGGGTATCTTGTTAATGTAAATGGTGCAACTCA
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               451    -    501
UN17448        --> GCCTAGAAAACACTGAACTCGATACGTATAATTACGTTTTACTACAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GCCTAGAAAACACTGAACTCGATACGTATAATTACGTTTTACTACAAATA
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               501    -    551
UN17448        --> ATTTCTTGATTGTTTTCAGGTATTTAACTTTCTGAACCAAGCAGAACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> ATTTCTTGATTGTTTTCAGGTATTTAACTTTCTGAACCAAGCAGAACTAT
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               551    -    601
UN17448        --> TTTCTCTTTGATTAAGTCTCACTACTGCTGATTATCAATTTTAGGGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> TTTCTCTTTGATTAAGTCTCACTACTGCTGATTATCAATTTTAGGGGGAA
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               601    -    651
UN17448        --> GAAGCAAAAGAAACTAATAAGTAATAATTGAACTGAGTTAAAAACATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ........gaagcaaaaggacTAATAACCGAACTGAGTTAAAAACATGCT
FD534826       <-- ................aggacTAATAACCGAACTGAGTTAAAAACATGCT
FD572103       <-- .......agaagcaaaagaacTAATAATTGAACAGAGTTCAAAACATGTT
EY900896       <-- ..................................GAGTTAAAAACATGCT
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GAAGCAAAAGAAACTAATAAGTAATAATTGAACAGAGTTCAAAACATGTT
EY929067       --> ........gaagcaaaaggacTAATAACCGAACTGAGTTAAAAACATGCT
FD530651       --> ................aggacTAATAACCGAACTGAGTTAAAAACATGCT
EX775520       --> .......................................AAAAACATGCT
FD572872       --> .........................................AAACATGTT

               651    -    701
UN17448        --> CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
FD534826       <-- CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
FD572103       <-- CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
EY900896       <-- CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> CATACTCTTTAAGTTCAACGAAATAACAACTCCAGTGATTAAATCCAAGA
EY929067       --> CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
FD530651       --> CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
EX775520       --> CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA
FD572872       --> CATACTCTTTAAATTCAAAGAAATAACAACTCCAGAGATGAAATCCAAGA

               701    -    751
UN17448        --> AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
FD534826       <-- AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
FD572103       <-- AAAATGAATACCATAAAGTAAAAACCAAAAATCATTGCCTAAACCGGATA
EY900896       <-- AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> AAAATGAATACCATAAAGTAAAAACCAAAAATCTTTGCCTAAACCGGATA
EY929067       --> AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
FD530651       --> AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
EX775520       --> AAAATGAATAACATAAAGTAATAACCAAAAATCTTTGCCTAAACCGGATA
FD572872       --> AAAATGAATACCATAAAGTAAAAACCAAAAATCTTTGCCTAAACCGGATA

               751    -    801
UN17448        --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
FD534826       <-- GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
FD572103       <-- GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
EY900896       <-- GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
EY929067       --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
FD530651       --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
EX775520       --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT
FD572872       --> GAACTACTGACTGGCTCCAAGCCACTTGGTGAAGTTATCAAACTCTGTGT

               801    -    851
UN17448        --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
FD534826       <-- AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
FD572103       <-- AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
EY900896       <-- AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
EY929067       --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
FD530651       --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
EX775520       --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA
FD572872       --> AATCACTGTCTGAGATCATAGTCTTGTACCACGCCTTGCCTGCAGCTTTA

               851    -    901
UN17448        --> ATAGCTTGTGACTCCTCCTTCGTGACGGGTTTCCTCTTCTTCTCGAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ATAGCTTGTGACTCCTCCTTAGTGACGGGTTTCCTCTTCTTCTCGAGTTT
FD534826       <-- ATAGCTTGTGACTCCTCCTTCGTGACGGGTTTCCTCTTCTTCTCGAGCTT
FD572103       <-- ATAGCGTGTGCCTCCTCCTTCGTGACGGGTTTCCTCTTCTTCTCGAGCTT
EY900896       <-- ATAGCTTGTGACTCCTCCTTCGTGACGGGT....................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> ATAGCTTGTGCCTCCTCCTaga............................
EY929067       --> ATAGCTTGTGACTCCTCCTTAGTGACGGGTTTCCTCTTCTTCTCGAGTTT
FD530651       --> ATAGCTTGTGACTCCTCCTTCGTGACGGGTTTCCTCTTCTTCTCGAGCTT
EX775520       --> ATAGCTTGTGACTCCTCCTTCGTGACGGGTTTCCTCTTCTTCTCGAGCTT
FD572872       --> ATAGCGTGTGCCTCCTCCTTCGTGACGGGTCTCCTCTTCTTCTCGAGCTT

               901    -    951
UN17448        --> CTCCTTCTTCGACTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- CTCCTTCTTAGACTTAACTCTCTGCGCTTCAGCCAACAAAGACATCCTCT
FD534826       <-- CTCCTTCTTCGACTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT
FD572103       <-- CTCCTTCTTCGACTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT
EY900896       <-- ..................................................
EX771486       <-- ...................................ACAGAGACATCCTCT
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> CTCCTTCTTAGACTTAACTCTCTGCGCTTCAGCCAACAAAGACATCCTCT
FD530651       --> CTCCTTCTTCGACTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT
EX775520       --> CTCCTTCTTCGATTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT
FD572872       --> CTCCTTCTTCGACTTAACCCTCTGCGCTTCAGCCAACAGAGACATCCTCT

               951    -   1001
UN17448        --> TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACGTTAAGGTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- TTGCAGTCTTAGCGTACGGATTCAACTTAAGCATCACATTAAGGTTCTTC  Raphanus sativus var. oleiformis
FD534826       <-- TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACGTTAAGGTTCTTC  Raphanus raphanistrum subsp. maritimus
FD572103       <-- TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACATTAAGGTTCTTC  Raphanus sativus cv Early Scarlet Globe
EY900896       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX771486       <-- TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACGTTAAGGTTCTTC  Raphanus raphanistrum subsp. landra
FY454346       <-- ..................................................  Raphanus sativus cv GSK3-1
FY444995       <-- ..................................................  Raphanus sativus cv GSK3-1
FD568544       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY428210       --> ..................................................  Raphanus sativus cv GSK3-1
EY929067       --> TTGCAGTCTTAGCGTACGGATTCAACTTAAGCATCACATTAAGGTTCTTC  Raphanus sativus var. oleiformis
FD530651       --> TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACGTTAAGGTTCTTC  Raphanus raphanistrum subsp. maritimus
EX775520       --> TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACGTTAAGGTTCTTC  Raphanus raphanistrum subsp. landra
FD572872       --> TTGCCGTCTTAGAATACGGATTCAACTTAAGCATCACATTAAGGTTCTTC  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN17448        --> AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
FD534826       <-- AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
FD572103       <-- AAGGGGTTC.........................................
EY900896       <-- ..................................................
EX771486       <-- AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
FY454346       <-- ..................................................
FY444995       <-- ..................................................
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
FD530651       --> AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
EX775520       --> AACGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT
FD572872       --> AAGGGGTTCTTCTTAAGCACAGCTCTCTTCGCATCCTTCTTAATCGGCTT

               1051   -   1101
UN17448        --> CACCACACTCTGAACCTCATCGGAGTTGATAATCCTAGCCAAATCAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- CACCACGCTCTGAACCTCATCGGAGTTGATAATCCTAGCCAAATCAGCGT  Raphanus sativus var. oleiformis
FD534826       <-- CACCACACTCTGAACCTCATCAGAGTTAATAATCCTAGCCAAATCAGCGT  Raphanus raphanistrum subsp. maritimus
FD572103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY900896       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX771486       <-- CACCACACTCTGAACCTCATCAGAGTTAGTAATCCTAGCCAAATCAGCGT  Raphanus raphanistrum subsp. landra
FY454346       <-- .................CATCGGAGTTGATAATCCTAGCAAGATCAGCGT  Raphanus sativus cv GSK3-1
FY444995       <-- ..................................................  Raphanus sativus cv GSK3-1
FD568544       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY428210       --> ..................................................  Raphanus sativus cv GSK3-1
EY929067       --> CACCACGCTCTGAACCTCATCGGAGTTGATAATCCTAGCCAAATCAGCGT  Raphanus sativus var. oleiformis
FD530651       --> CACCACACTCTGAACCTCATCAGAGTTAATAATCCTAGCCAAATCAGCGT  Raphanus raphanistrum subsp. maritimus
EX775520       --> CACCACACTCTGAACCTCATCAGAGTTAGTAATCCTAGCCAAATCAGCGT  Raphanus raphanistrum subsp. landra
FD572872       --> CACCACGCTCTGAACCTCATCGGAGTTGATAATCCTAGCAAGGTCAGCGT  Raphanus sativus cv Early Scarlet Globe

               1101   -   1151
UN17448        --> TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCAGATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- TCACCATCTTCGCACGAGGC..............................
FD534826       <-- TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCc......
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCAGATGGC
FY454346       <-- TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCAGACGGC
FY444995       <-- ..........................................CAGACGGC
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> TCACCATCTTCGCACGAGGC..............................
FD530651       --> TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCc......
EX775520       --> TCACCATCTTCGCACGAGGCAAAACATAACCCTTCTTCATCTCAGATGGC
FD572872       --> TCACCATCTTCGCACGAGGCAAAACGTAACCCTTCTTCAT..........

               1151   -   1201
UN17448        --> TTCTCAAACGATCCATAGATAGACTCGAGCTTCTCAAAAGCAGACTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- TTCTCAAACGATCCATAGATAGACTCGAGCTTCTCAAAAGCAGACTTAGT
FY454346       <-- TTCTCAAACGAACCATAGATAGACTCAAGCTTCTCAAAAGCAGACTTAGT
FY444995       <-- TTCTCAAACGAACCATAGATAGACTCAAGCTTCTCAAAAGCAGACTTAGT
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> TTCTCAAACGATCCATAGATAGACTCGAGCTTCTCAAAAGCAGACTTAGT
FD572872       --> ..................................................

               1201   -   1251
UN17448        --> CCAGATCACAAACCTCCCGAGATGACCACCAGGAGCTAACTTCAACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- CCAGATCACAAACCTCCCGAGATGACCACCAGGAGCTAACTTCAACAAGT
FY454346       <-- CCAGATCACAAACCTCCCGAGATGACCACCAGGAGCTAACTTCAACAAGT
FY444995       <-- CCAGATCACAAACCTCCCGAGATGACCACCAGGAGCTAACTTCAACAAGT
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> CCAGATCACAAACCTCCCGAGATGACCACCAGGAGCTAACTTCAACAAGT
FD572872       --> ..................................................

               1251   -   1301
UN17448        --> TAAGCCTCTCCACATGACAAAGCTCAACACCAGTAATGTTCCTAAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- TAAGCCTCTCCACATGACAAAGCTCAACACCAGTAATGTTCCTAAACGCT
FY454346       <-- TAAGCCTCTCCACATGACAAAGCTCAACACCAGTAATGTTCCTAAACGCT
FY444995       <-- TAAGCCTCTCCACATGACAAAGCTCAACACCAGTAATGTTCCTAAACGCT
FD568544       <-- ..................................................
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> TAAGCCTCTCCACATGACAAAGCTCAACACCAGTAATGTTCCTAAACGCT
FD572872       --> ..................................................

               1301   -   1351
UN17448        --> TTCACAATCTTAGCTCCTTCGGTTCCGTACACAACAAGAGGACCTTTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- TTCACAATCTTAGCTCCCTCGGTTCCGTACACAACAAGAGGACCTTTCCG
FY454346       <-- TTCACAATCTTAGCTCCTTCAGTTCCGTACACAACGAGAGGACCTTTCCG
FY444995       <-- TTCACAATCTTAGCTCCTTCAGTTCCGTACACAACGAGAGGACCTTTCCG
FD568544       <-- ...........................TACACAACAAGAGGACCTTTCCG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> TTCACAATCTTAGCTCCCTCGGTTCCGTACACAACAAGAGGACCTTTCCG
FD572872       --> ..................................................

               1351   -   1401
UN17448        --> ACAAACGTAACGACGGTTCCTCATCTTACCGACACCAGACCTAATCCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ACAAACGTAACGACGGTTCCTCATCTTACCGACACCAGACCTAATCCCGA
FY454346       <-- ACAAACGTAACGACGGTTCCTCATCTTACCAACACCAGACCTAATCCCGA
FY444995       <-- ACAAACGTAACGACGGTTCCTCATCTTACCAACACCAGACCTAATCCCGA
FD568544       <-- ACAAACGTAACGACGGTTCCTCATCTTACCGACACCAGACCTAATCCCGA
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ACAAACGTAACGACGGTTCCTCATCTTACCGACACCAGACCTAATCCCGA
FD572872       --> ..................................................

               1401   -   1451
UN17448        --> TACTGTCCTTGGCCTTCTCGGCGTCATCGTAAGCACCGATCTGCTTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- TACTGTCCTTGGCCTTCc................................
FY454346       <-- TACTGTCCTTGGCCTTCTCGGCGTCATCGTAAGCACCGATCTGCTTCAAA
FY444995       <-- TACTGTCCTTGGCCTTCTCGGCGTCATCGTAAGCACCGATCTGCTTCAAA
FD568544       <-- TACTGTCCTTGGCCTTCTCGGCGTCATCGTAAGCACCGATCTGCTTCAAA
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> TACTGTCCTT........................................
FD572872       --> ..................................................

               1451   -   1501
UN17448        --> ACCTTGATCGCAGCGGAAGTCTTCTCCACGGCCTCAGCAGAATCGCTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ACCTTGATCGCAGCGGAAGTCTTCTCCACGGCCTCAGCAGAATCGCTAAC
FY444995       <-- ACCTTGATCGCAGCGGAAGTCTTCTCCACGGCCTCAGCAGAATCGCTAAC
FD568544       <-- ACCTTGATCGCAGCGGAAGTCTTCTCCACGGCCTCAGCTGAATCGCTAAC
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1501   -   1551
UN17448        --> GACGAGAGGCATCTCGGGAACGTTCTCGATCTTGTGACCACGAGCCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- GACGAGAGGCATCTCGGGAACGTTCTCGATCTTGTGACCACGAGCCGTCA
FY444995       <-- GACGAGAGGCATCTCGGGAACGTTCTCGATCTTGTGACCACGAGCCGTCA
FD568544       <-- GACGAGAGGCATCTCGGGAACGTTCTCGATCTTGTGACCACGAGCCGTCA
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1551   -   1601
UN17448        --> CGAGAGAAGGAACAGCTGTCGCGGCGATGGCCGAGACGATCGCGTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- CGAGAGAAGGAACAGCTGTCGCGGCGATGGCCGAGACGATCGCGTGCCTC
FY444995       <-- CGAGAGAAGGAACAGCTGTCGCGGCGATGGCCGAGACGATCGCGTGCCTC
FD568544       <-- CGAGAGAAGGAACAGCTGTGGCGGCGATGGCCGAGACGATCGCGTGCCTC
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1601   -   1651
UN17448        --> TTCATGTTGACGTTGACGCGACGGTGCCAGCGTCTCGTGATCTTAGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- TTCATGTTGACGTTGACGCGACGGTGCCAGCGTCTCGTGATCTTAGTCGG
FY444995       <-- TTCATGTTGACGTTGACGCGACGGTGCCAGCGTCTCGTGATCTTAGTCGG
FD568544       <-- TTCATGTTGACGTTGACGCGACGGTGCCAGCGTCTCGTGATCTTAGTCGG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1651   -   1701
UN17448        --> AGCGAACATCCGACCACCGCGACACATGTTTCCGAAGGCCGCTTGACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- AGCGAACATCCGACCACCGCGACACATGTTTCCGAAGGCCGCTTGACCTG
FY444995       <-- AGCGAACATCCGACCACCGCGACACATGTTTCCGAAGGCCGCTTGACCTG
FD568544       <-- AGCGAACATCCGACCGCCGCGACACATGTTTCCGAAGGCCGCTTGACCTG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1701   -   1751
UN17448        --> CGCGGTGGGTTCCACCACCGGGAACACGAGGGATACGGGACACGGCGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- CGCGGTGGGTTCCACCACCGGGAACACGAGGGATACGGGACACGGCGCGT
FY444995       <-- CGCGGTGGGTTCCACCACCGGGAACACGAGGGATACGGGACACGGCGCGT
FD568544       <-- CGCGGTGAGTTCCACCACCGGGAACACGAGGGATACGGGACACGGCGCGT
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1751   -   1801
UN17448        --> CCGGTTCCCCAGGACTCGGCGGAGGTCTGGTGACCGGCGCGTTTGGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- CCGGTTCCCCAGGACTCGGCGGAGGTCTGGTGACCGGCGCGTTTGGAGAC
FY444995       <-- CCGGTTCCCCAGGACTCGGCGGAGGTCTGGTGACCGGCGCGTTTGGAGAC
FD568544       <-- CCGGTTCCCCAGGACTCGGCGGAGGTCTGGTGACCGGCGCGTTTGGAGAC
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1801   -   1851
UN17448        --> GGCGTAAGGCTGACGGCTGTTGTTGGAGATCTGAGCGTGGACGAAGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- GGCGTAAGGCTGACGGCTGTTGTTGGAGATCTGAGCGTGGACGAAGCTGA
FY444995       <-- GGCGTAAGGCTGACGGCTGTTGTTGGAGATCTGAGCGTGGACGAAGCTGA
FD568544       <-- AGCGTAAGGCTGACGGCTGTTGTTTGAGATCTGGGCGTGGACGAAGCTGA
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1851   -   1901
UN17448        --> CGATGTCTGGCCTCACGGGTGCGGTCATGACGTCCGGTAGACAGATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- CGATGTCTGGCCTCACGGGTGCGGTCATGACGTCCGGTAGACAGATGGTG
FY444995       <-- CGATGTCTGGCCTCACGGGTGCGGTCATGACGTCCGGTAGACAGATGGTG
FD568544       <-- CGATGTCTGGCCTCACGGGTGCTGTCATGACGTCGGGGAGACAGACGGTG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1901   -   1951
UN17448        --> GTGGATTGGTCGGTGGTCATGTCACCTTCGAG-TCCTGGACGGAGACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- GTGGATTGGTCGGTGGTCATGTCACCTTCGAG-TCCTGGACGGAGA....
FY444995       <-- GTGGATTGGTCGGTGGTCATGTCACCTTCGAG-TCCTGGACGGAGACTAG
FD568544       <-- GTGGATTGGTCAGTGGACATGTCACCTTCGAGGACATGGACGGAGACTAG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               1951   -   2001
UN17448        --> AGGGCGTGCGGCGGCGACTGCCATTGTTTTGGAGGGAAAGAGGGTTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY933649       <-- ..................................................
FD534826       <-- ..................................................
FD572103       <-- ..................................................
EY900896       <-- ..................................................
EX771486       <-- ..................................................
FY454346       <-- ..................................................
FY444995       <-- AGG...............................................
FD568544       <-- AGGGCGTGCGGCGGCGACTGCCATTGTTTTGGAGGGAAAGAGGGTTTGGG
FY428210       --> ..................................................
EY929067       --> ..................................................
FD530651       --> ..................................................
EX775520       --> ..................................................
FD572872       --> ..................................................

               2001   -   2051
UN17448        --> ATCCC
                   ~~~~~
EY933649       <-- .....
FD534826       <-- .....
FD572103       <-- .....
EY900896       <-- .....
EX771486       <-- .....
FY454346       <-- .....
FY444995       <-- .....
FD568544       <-- ATCCC
FY428210       --> .....
EY929067       --> .....
FD530651       --> .....
EX775520       --> .....
FD572872       --> .....