1      -     51
UN17450        --> GGGATATTTTATCGGCAACCTTTCATGCAAAAACTAGTTTACTACAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- ..................................................
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> GGGATATTTTATCGGCAACCTTTCATGCAAAAACTAGTTTACTACAATTG
EW736128       --> GGGATATTTTATCGGCAACCTTTCATGCAAAAACTAGTTTACTACAATTG
EX908160       --> ..........ATCGGCAACCTTTAATGCAAAAACTAGTTTAAAACAATTG
EX892044       --> ......................caATGCAAAAACTAGTTTATTACAATTG
EX907288       --> ..........................GCAAAAACTAGTTTACTACAATTG
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> ..................................................
EY943181       --> ..................................................
FD951269       --> ..................................................

               51     -    101
UN17450        --> ACTCGTTCAGCAAAGACAGTTTCTTCTTCCCTTT-TTTGTTGATGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- .........................................GATGGAAGA
EX888029       <-- ..................................................
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> ACTCGTTCAGCAAAGACAGTTTCTTCTTCCCTTT-TTTGTTGATGGAAGA
EW736128       --> ACTCGTTCAGCAAAGACAGTTTCTTCTTCCCTTT-TTTGTTGATGGAAGA
EX908160       --> ACTCGTTCGGCAAAGACAGTTTCTTCTTCC-TTC-TTT-TTGATGGAAGA
EX892044       --> ACTCGTTCAGCAAAGACAGTTTCTTCTTCC-TTT-TTT-TTGATGGAAGA
EX907288       --> ACTCGTTCAGCAAAGACAGTTTCTTCTTCCCTTT-TTTGTTGATGGAAGA
EV574463       --> .....TTCAGCAAAGACAGTTTCTTCTTCCTTTTCTTTTTTGATGGAAGA
EY912440       --> .........................................GATGGAAGA
FD539940       --> ..........................................gacagctg
EY943181       --> ..................................................
FD951269       --> ..................................................

               101    -    151
UN17450        --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EX888029       <-- ..................................................
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EW736128       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EX908160       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EX892044       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EX907288       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EV574463       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EY912440       --> AGGCTTATAACATGAGATCAAAAGAACAACTTAAAACGTATTTAACAATC
FD539940       --> cttcttcctttttttGATCAAAAGAACAACTTAAAACGTATTTAACAATC
EY943181       --> ......................gGAACAACTTAAAACGTATTTAACAATC
FD951269       --> ..................................................

               151    -    201
UN17450        --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
EX888029       <-- .....................................agACTGACACAAA
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> CAAAGATCTCAGCTTTT-GTTGCAAGAAAATTGAAAAAAACTGACACAAA
EW736128       --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
EX908160       --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
EX892044       --> CAAAGATCTCAGCTTTTTGTTGCAAGGGAATTGAAAAGACTTGACACAAA
EX907288       --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
EV574463       --> CAAAGATCTCAGCTTTTTGTTGCAAGGGAATTGAAAAGACTTGACACAAA
EY912440       --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
FD539940       --> CAAAGATCTCAG-TTTT-GTTGCAAGAGAATTGAAAA-GACTGACACAAA
EY943181       --> CAAAGATCTCAGCTTTT-GTTGCAAGAGAATTGAAAAAAACTGACACAAA
FD951269       --> ..............................TTGAAAAAAACTGACACAAA

               201    -    251
UN17450        --> CCACCACACATTTGTTTACTTAA-GAAGGCTCTCTCTACTTCTTTGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- CCACCACACATTTGTTTACTTAA-GAAGCCTCTCTCTACTTCTTTGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- CCACCACATATGTGTT-ACTTAA-GAAGGCTCTCTCTA----CTTGGATC  Raphanus sativus var. oleiformis
EV570079       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD544299       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899213       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX888761       <-- ..................................................  Raphanus sativus var. oleiformis
EX903176       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD955171       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY437008       <-- ..................................................  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> CCACCACACATTTGTTTACTTAA-AAAGGCTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> CCACCACACATTTGTTTACTTAA-GAAGGCTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> CCACCACACATTTGTTTACTTAA-GAAGGTTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> CCACCACATATGTGTTTACTTAAAGAAGGCTCTCTCTACTT---TGGATC  Raphanus sativus var. oleiformis
EX907288       --> CCACCACACATTTGTTTACTTAA-GAAGGCTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> CCACCACATATGTGTTTACTTAAAGAAGGCTCTCTCTACTT---TGGATC  Raphanus raphanistrum subsp. landra
EY912440       --> CCACCACACATTTGTTTACTTAA-GAAGCCTCTCTCTACTTCTTTGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> CCACCACACATGTGTTTACTTAA-GAAGGCTCTCTCTACTTCTTTGGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> CCACCACACATTTGTTTACTTAA-GAAGGCTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> CCACCACACATTTGTTTACTTAA-GAAAGGTCTCTCTACTTCTTTGGATC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN17450        --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- CACATCCAAATTCGTCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
EX888029       <-- CACATCCAAATTCATCT-CTGTAGGTTA-GCAAA-GATCGTCAGAGCTCA
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAACTCA
EW736128       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAACTCA
EX908160       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
EX892044       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
EX907288       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
EV574463       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
EY912440       --> CACATCCAAATTCGTCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
FD539940       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAGAGATCGTCAGAGCTCA
EY943181       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAAAGATCGTCAGAGCTCA
FD951269       --> CACATCCAAATTCATCTTCTGTAGGTTAAGCAAA................

               301    -    351
UN17450        --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EX888029       <-- GGTACAC-TTG-TGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EV570079       <-- ..................................................
FD544299       <-- ..................................................
EW731244       <-- ..................................................
EY925144       <-- ..................................................
EY899213       <-- ..................................................
EX888761       <-- ..................................................
EX903176       <-- ..................................................
EX904226       <-- ..................................................
FD535443       <-- ..................................................
FD955171       <-- ..................................................
EY922232       <-- ..................................................
FY437008       <-- ..................................................
EY947245       <-- ..................................................
EW735822       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCCCTTGCC
EW736128       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCCCTTGCC
EX908160       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EX892044       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EX907288       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EV574463       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EY912440       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
FD539940       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
EY943181       --> GGTACACCTTGTTGGCCGAGTGAGCTATGGTCTGAGCAATCTCTCTTGCC
FD951269       --> ..................................................

               351    -    401
UN17450        --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- GCCTCGATCTTCCTGAGCGTTATGAACGCTTGGTTGTTTGCGATTGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- GCCTCGATCTTC-TGAGCGTTATGAACGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus var. oleiformis
EV570079       <-- .........TTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCCTG  Raphanus raphanistrum subsp. landra
FD544299       <-- ..............GAGCGTTATGA-CGCTTGGT-G-TTGCGA-TGC-TG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899213       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX888761       <-- ..................................................  Raphanus sativus var. oleiformis
EX903176       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD955171       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY437008       <-- ..................................................  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> GCCTCGATCTTCCTGAACGTTATGAAGGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> GCCTCGATCTTCCTGAGCGTTATGAACGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus var. oleiformis
EX907288       --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGGTTGTTTGCGATTGCCTG  Raphanus raphanistrum subsp. landra
EY912440       --> GCCTCGATCTTCCTGAGCGTTATGAACGCTTGGTTGTTTGCGATTGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> GCCTCGATCTTCCTGAGCGTTATGAACGCTTGGTTGTTTGCGATTGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> GCCTCGATCTTCCTGAGCGTTATGAAGGCTTGG.................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN17450        --> ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- ACCAATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus var. oleiformis
EV570079       <-- ACCAATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACCGCAC  Raphanus raphanistrum subsp. landra
FD544299       <-- ACC-ATGGGCTGAGCACTCTTG-CTTCTCC-TGAGCGCGGATAACTGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- ......GAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899213       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX888761       <-- ..................................................  Raphanus sativus var. oleiformis
EX903176       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD955171       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY437008       <-- ..................................................  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> ACCTATGAGCTGAACACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> ACCAATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus var. oleiformis
EX907288       --> ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> ACCAATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACCGCAC  Raphanus raphanistrum subsp. landra
EY912440       --> ACCTATGAGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> ACCAATGGGCTGAGCACTCTTGGCTTCTCCCTGAGCGCGGATAACTGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN17450        --> TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCTCTCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- CCCTTTTGTCTTGTTCGGCCTTCTCAACAATGAACTTAGCTCGCTCAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCTCTCAGCC  Raphanus sativus var. oleiformis
EV570079       <-- TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCTCTCAGCC  Raphanus raphanistrum subsp. landra
FD544299       <-- TC-TTTTGTCTTGTTCGGC-TTCTCAACGATGAACTTAGCCCGCTCAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- TCCTTTTGTCTTGTTCGGCTTTCTCAACTATGAACTTAGCCCTCTCAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY899213       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX888761       <-- ..................................................  Raphanus sativus var. oleiformis
EX903176       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD955171       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY437008       <-- ..................................................  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACTATGAACTTAGCCCTCTCAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACTATGAACTTAGCCCTCTCAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCTCGCTCAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCTCTCAGCC  Raphanus sativus var. oleiformis
EX907288       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACTATGAACTTAGCCCTCTCAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCTCTCAGCC  Raphanus raphanistrum subsp. landra
EY912440       --> CCCTTTTGTCTTGTTCGGCCTTCTCAACAATGAACTTAGCTCGCTCAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> TCCTTTTGTCTTGTTCGGCCTTCTCAACGATGAACTTAGCCCGCTCAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN17450        --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- TCTTGAGCAGCCACCTGCTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus var. oleiformis
EV570079       <-- TCTTGAGCAGCCACCTGCTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. landra
FD544299       <-- TCTTGAGCCGCCAC-TGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- ..cTGAGCAGCCAC-TGCTTTGCTTCAATGGCAGCTGTGAACTCTTTCCC  Raphanus raphanistrum subsp. landra
EY899213       <-- ............acaTGCTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. maritimus
EX888761       <-- .................CTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus var. oleiformis
EX903176       <-- ..................TTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- ...................TGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- ..................tttgctTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. maritimus
FD955171       <-- ...........................ATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY437008       <-- ..................................................  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> TCTTGAGCAGCCACCTGCTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus var. oleiformis
EX907288       --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> TCTTGAGCAGCCACCTGCTTTGCTTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. landra
EY912440       --> TCTTGAGCAGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> TCTTGAGCCGCCACCTGCTTGGCCTCAATGGCAGCTGTGAACTCCTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN17450        --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGCGCGATGTTGAAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus sativus var. oleiformis
EV570079       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. landra
FD544299       <-- AAA-GTCAAGGTAGTGATGGAGACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. landra
EY899213       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. maritimus
EX888761       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus sativus var. oleiformis
EX903176       <-- AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. maritimus
FD955171       <-- AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- ......................ACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. landra
FY437008       <-- ..............................AAGCGCGATGTTGAAGTT-G  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus sativus var. oleiformis
EX907288       --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGGGCAATGTTGAAGTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> AAAAGTCAAGGTAGTGATGGACACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. landra
EY912440       --> AAAAGTCAAGGTAGTGATGGAGACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> AAA-GTCAAGGTAGTGATGGAGACATCGTCAAGCGCGATGTTGAAGTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN17450        --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- TTGCAC............................................
EX888029       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EV570079       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
FD544299       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EW731244       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EY925144       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EY899213       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX888761       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX903176       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX904226       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
FD535443       <-- TTACACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
FD955171       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EY922232       <-- TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
FY437008       <-- TTGCACGTTGTGTCAGAATCTTCCTG-TCTCCCTACTGACCGCCTCTCTC
EY947245       <-- ..................................................
EW735822       --> TTGCACGTTGTGTCAAAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EW736128       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX908160       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX892044       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EX907288       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EV574463       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EY912440       --> TTGCAC............................................
FD539940       --> TTGCACGTTGTGTCAGAATCTTCCTGATCTCCCTACTGACCGCCTCTCTC
EY943181       --> ..................................................
FD951269       --> ..................................................

               651    -    701
UN17450        --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EV570079       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
FD544299       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EW731244       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY925144       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY899213       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX888761       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX903176       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX904226       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
FD535443       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
FD955171       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY922232       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAACTTTCAAAGT
FY437008       <-- TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY947245       <-- ..................................................
EW735822       --> ..................................................
EW736128       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX908160       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX892044       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EX907288       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EV574463       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY912440       --> ..................................................
FD539940       --> TGAGTGATAAGCTGGCTTGCATTGTACTGAGCAACAACAGCTTTCAAAGT
EY943181       --> ..................................................
FD951269       --> ..................................................

               701    -    751
UN17450        --> CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus var. oleiformis
EV570079       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. landra
FD544299       <-- CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. landra
EY899213       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. maritimus
EX888761       <-- CTCGTGGATTATAGAAGGCAGAACTCTCCCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus var. oleiformis
EX903176       <-- CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- CTCGTGGATAATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. maritimus
FD955171       <-- CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. landra
FY437008       <-- CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTG................  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> CTCGTGGATAATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus sativus var. oleiformis
EX907288       --> CTCGTGGATTAT......................................  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> CTCGTGGATTATAGAAGGCAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. landra
EY912440       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> CTCGTGGATTATAGAAGGAAGAACTCTCTCGCTGTAGTTCTCTCCAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN17450        --> TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus sativus var. oleiformis
EV570079       <-- TTCTGT............................................  Raphanus raphanistrum subsp. landra
FD544299       <-- TTCTATAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus raphanistrum subsp. landra
EY899213       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTG  Raphanus raphanistrum subsp. maritimus
EX888761       <-- TTCTGTAGATCTCGGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus sativus var. oleiformis
EX903176       <-- TTCTG-AGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- TTCTATAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTG  Raphanus raphanistrum subsp. maritimus
FD955171       <-- TTCTGTAGATCCCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus raphanistrum subsp. landra
FY437008       <-- TTCTGTAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTG  Raphanus sativus cv GSK3-1
EY947245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> TTCTATAGATCTCAG-TAACTGGTCTGCCATGGGACGCGTGA........  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> TTCTGTAGATC.......................................  Raphanus sativus var. oleiformis
EX907288       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> TTCTGTAGATC.......................................  Raphanus raphanistrum subsp. landra
EY912440       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> TTCTATAGATCTCAGGTAACTGGTCTGCCATGGGACGCGTGAGAACCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN17450        --> AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EV570079       <-- ..................................................
FD544299       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EW731244       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EY925144       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EY899213       <-- AGCCCAATTTTAACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EX888761       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EX903176       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EX904226       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
FD535443       <-- AGCCCAATTTTAACCATCTGGAGACCACGGCTTCCGGAAGTACTCTCAAC
FD955171       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EY922232       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
FY437008       <-- AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAAC
EY947245       <-- .....................................AAGTACTCTCAAC
EW735822       --> ..................................................
EW736128       --> ..................................................
EX908160       --> ..................................................
EX892044       --> ..................................................
EX907288       --> ..................................................
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> AGCCCAATTTTCACCATCTGGAGATCACGGCTTCCGGAAGTACTCTCAA.
EY943181       --> ..................................................
FD951269       --> ..................................................

               851    -    901
UN17450        --> AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTCTCGAACCAAG
EV570079       <-- ..................................................
FD544299       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EW731244       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EY925144       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCAAACCAAG
EY899213       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EX888761       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EX903176       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EX904226       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
FD535443       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
FD955171       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EY922232       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
FY437008       <-- AAGGTAAGGTCGTGCACGAACGTCGTAGATGACAGGCCTTTCGAACCAAG
EY947245       <-- AAGGTAAGGTCGTGCACGAACGTCATAGATGACAGGCCTTTCGAACCAAG
EW735822       --> ..................................................
EW736128       --> ..................................................
EX908160       --> ..................................................
EX892044       --> ..................................................
EX907288       --> ..................................................
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> ..................................................
EY943181       --> ..................................................
FD951269       --> ..................................................

               901    -    951
UN17450        --> GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- GAACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus var. oleiformis
EV570079       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD544299       <-- GAACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus raphanistrum subsp. landra
EY899213       <-- GAACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus raphanistrum subsp. maritimus
EX888761       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus var. oleiformis
EX903176       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- GAACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- GAACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus raphanistrum subsp. maritimus
FD955171       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus raphanistrum subsp. landra
FY437008       <-- GCACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTTACACCGACT  Raphanus sativus cv GSK3-1
EY947245       <-- GGACCATAAGGTGTGTACCCTCAGGGTAAACCTTATCTTTAACACCGACT  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> ..................................................  Raphanus sativus var. oleiformis
EX907288       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> ..................................................  Raphanus raphanistrum subsp. landra
EY912440       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               951    -   1001
UN17450        --> AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACc...........
EV570079       <-- ..................................................
FD544299       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EW731244       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EY925144       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EY899213       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EX888761       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EX903176       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EX904226       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
FD535443       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
FD955171       <-- AAACGGTCGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EY922232       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
FY437008       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EY947245       <-- AAACGGTTGAACATGATGGCTCGATGACCTCCGTCGACATTGTAGAGACT
EW735822       --> ..................................................
EW736128       --> ..................................................
EX908160       --> ..................................................
EX892044       --> ..................................................
EX907288       --> ..................................................
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> ..................................................
EY943181       --> ..................................................
FD951269       --> ..................................................

               1001   -   1051
UN17450        --> GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- ..................................................
EV570079       <-- ..................................................
FD544299       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EW731244       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EY925144       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EY899213       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EX888761       <-- GTGTGTGGCACCGTAGGGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EX903176       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EX904226       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
FD535443       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
FD955171       <-- GTGTGAGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EY922232       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
FY437008       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EY947245       <-- GTGTGTGGCACCGTAGAGACCAAGCCCACCGATAATCCCAATCTTAAGCA
EW735822       --> ..................................................
EW736128       --> ..................................................
EX908160       --> ..................................................
EX892044       --> ..................................................
EX907288       --> ..................................................
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> ..................................................
EY943181       --> ..................................................
FD951269       --> ..................................................

               1051   -   1101
UN17450        --> ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................
EX888029       <-- ..................................................
EV570079       <-- ..................................................
FD544299       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTG
EW731244       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCAGCACTTTCACGTTGTTC
EY925144       <-- ACGCTGATACTGGACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTG
EY899213       <-- ACGCAGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EX888761       <-- ACGCAGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EX903176       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EX904226       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
FD535443       <-- ACGCAGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
FD955171       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EY922232       <-- ACGCTGATACTGGACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTG
FY437008       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EY947245       <-- ACGCTGATACTGCACCACCTCCTGGCACCTTCGGCACTTTCACGTTGTTC
EW735822       --> ..................................................
EW736128       --> ..................................................
EX908160       --> ..................................................
EX892044       --> ..................................................
EX907288       --> ..................................................
EV574463       --> ..................................................
EY912440       --> ..................................................
FD539940       --> ..................................................
EY943181       --> ..................................................
FD951269       --> ..................................................

               1101   -   1151
UN17450        --> AGATTCATCTTTTTTTTTT------CTCTC--GAAACTTTGCTAATGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888029       <-- ..................................................  Raphanus sativus var. oleiformis
EV570079       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD544299       <-- AGATTCATCTTTTTTTTT-------CTCTC--GAAACTTTGCTAATGTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731244       <-- AGATTCATCTTTTTTTTTT------CTCTCTCGAAACTTTGCTAATGTCc  Raphanus sativus cv Rat-Tail Radish #3870
EY925144       <-- AGATTCATCTTTTTTTTTT------CTCTC--GAAACTTTGCTAATGTCG  Raphanus raphanistrum subsp. landra
EY899213       <-- AAATTCATCTTTTTTTCTT-------TCTC--GAAACTTTGCTAATGTCG  Raphanus raphanistrum subsp. maritimus
EX888761       <-- AAATTCATCTTTTTTTCTT-------TCTC--GAAACTTTGCTAATGTCG  Raphanus sativus var. oleiformis
EX903176       <-- AGATTCATCTTTTTTTTTTTTTTCTCTCTC--GAAACTTTGCTAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EX904226       <-- AGATTCATCTTTGTTT---------TTCTC--GAAACTTTGCTAATGT..  Raphanus sativus cv Rat-Tail Radish #3870
FD535443       <-- AAATTCATCTTTTTTTCTT-------TCTC--GAAACTTTGCTAATGTCG  Raphanus raphanistrum subsp. maritimus
FD955171       <-- AGATTCATCTTTTTTTTTT------CTCTCTCGAAACTTTGCTAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY922232       <-- AAATTCATCTTTTTTTTTT------CTCTC--GAAACTTTGCTAATGTCG  Raphanus raphanistrum subsp. landra
FY437008       <-- AAATTCATCTTTTTTTCTT-------TCTC--GAAACTTTGCTta.....  Raphanus sativus cv GSK3-1
EY947245       <-- AGATTCATCTTTTTTTTTT---TCTCTCTC--GAAACTTTGCTAATGTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW735822       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW736128       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908160       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX892044       --> ..................................................  Raphanus sativus var. oleiformis
EX907288       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV574463       --> ..................................................  Raphanus raphanistrum subsp. landra
EY912440       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539940       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY943181       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951269       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1151   -   1201
UN17450        --> CGGAGAAGAGAGGGGAAGATGGTGAGAAAAGGGGGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916832       <-- .......................................
EX888029       <-- .......................................
EV570079       <-- .......................................
FD544299       <-- CGGAGAAGAGAGGGGAAGATcc.................
EW731244       <-- c......................................
EY925144       <-- CGGAGAAGAGAGGGGAAGATGGTGAGAAAAGGGGGTTTC
EY899213       <-- CGGAGAAGAGAGGGGAAGATcc.................
EX888761       <-- CGGAGAAGcc.............................
EX903176       <-- CGGAGAAGAGAGGcc........................
EX904226       <-- .......................................
FD535443       <-- CGGAGAAGAGAGGGGAAGATcc.................
FD955171       <-- CGGAGAAGAGAGGGGAGGACGGTcc..............
EY922232       <-- CGGAGAAGAGAGGGGAAGATcc.................
FY437008       <-- .......................................
EY947245       <-- CGGAGAAGAGAGGGGAcc.....................
EW735822       --> .......................................
EW736128       --> .......................................
EX908160       --> .......................................
EX892044       --> .......................................
EX907288       --> .......................................
EV574463       --> .......................................
EY912440       --> .......................................
FD539940       --> .......................................
EY943181       --> .......................................
FD951269       --> .......................................