1      -     51
UN17457        --> GGCAAAACAAAAAACAAAAA--AAAACGTAAAATTGATTATCAACCGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ..................................................
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> GGCAAAACAAAAAACAAAAA--AAA-CGTAAAATTGATTATCAACCGTTA
EX746410       --> .ggAAAACAAAAAACAAAAA--AAAACGTAAAATTGATTATCAACCGTTA
EY897161       --> .ggAAAACAAAAAACAAAAA--AAAACGTAAAATTGATTATCAACCGTTA
FD562318       --> .ggAAAACAAAAAACAAAAAGAAAAACGTAAAATTGATTATCAACCGTTA
FY439985       --> .............................tAAATTGATTATCAACCGTTA

               51     -    101
UN17457        --> GATTATTCATATTGCCATCAACGCCAACCAATCGCTACACAGATCATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ..................................................
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> GATTATTCATATTGCCATCAACGCCAACCAATCGCTACACAGATCATCTG
EX746410       --> GATTATTCATATTGCCATCAACGCCAACCAATCGCTACACAGATCATCTG
EY897161       --> GATTATTCATATTGCCATCAACGCCAACCAATCGCTACACAGATCATCTG
FD562318       --> GAT-ATTCATATTGTCATCAACGCCAACCAATCGCTACACAGATCATCTG
FY439985       --> GATTATTCATATTGCCATCAACGCCAACCAACCGCTACACAGATCATCTG

               101    -    151
UN17457        --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ..................................................
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTC
EX746410       --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCCCATCTCCCTCTCTGTATCTC
EY897161       --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTC
FD562318       --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTC
FY439985       --> CCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTC

               151    -    201
UN17457        --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ...................................ACAATCAAGCTTTAG
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG
EX746410       --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG
EY897161       --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG
FD562318       --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG
FY439985       --> TCCGGCTAGCCGTTCTCTTAGGTGGTGTAACGGTAACAATCAAGCTTTAG

               201    -    251
UN17457        --> CAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- CAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTC
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> CAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTC
EX746410       --> CAGCCGTTGAATTATCGCGGTTTCCAACTGTAAATGGGCTGCTTCCACTC
EY897161       --> CAGTCGTTGAATTATCGCGGTTTCCAACTGTAAATGGGCTGCTTCCACTC
FD562318       --> CAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTC
FY439985       --> CAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTC

               251    -    301
UN17457        --> AAAGGTAGCTAGAGAATTCCGAGGACACGAAGACCCTGTAAAGCTTGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- AAAGGTAGCTAGAGAATTCCGAGTACACGAAGACCCTGCAAAGCTTGCCT
EX750822       <-- ..................................................
FD566251       <-- ..................................................
EV539136       --> AAAGGTAGCTAGAGAATTCCGAGTACACGAAGACCCTGCAAAGCTTGCCT
EX746410       --> AAAGGTAGCTAGAGAATTCCGAGGACACGAAGACCCTGTAAAGCTTGCCT
EY897161       --> AAAGGTAGCTAGAGAATTCCGAGGACACGAAGACCCTGTAAAGCTTGCCT
FD562318       --> AAAGGTAGCTAGAGAATTCCGTGGACACGAAGACCCTGTAAAGCTTGCCT
FY439985       --> AAAGGTAGCTAGAGAATTCCGAGGACACGAAGACCCTGTAAAGCTTGCCT

               301    -    351
UN17457        --> CCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- CCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC
EX750822       <-- ..............AGTGTGTGTGAGGTTGAAGCATTGTTTGAGCTGTTC
FD566251       <-- ..................................................
EV539136       --> CCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC
EX746410       --> CCGAAACTGCCTTTAGTGTGTGTGAGGTTGAAGCATTGTTTGAGCTGTTC
EY897161       --> CCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC
FD562318       --> CCGAGACTGTCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC
FY439985       --> CCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCTGTTC

               351    -    401
UN17457        --> AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- AAGAGCATAAGCAGTTCCGTTGTTAATGATGGTTTGATAAACAAGGAGGA
EX750822       <-- AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA
FD566251       <-- ..................................................
EV539136       --> AAGAGCATAAGCAGTTCCGTTGTTAATGATGGTTTGATAAACAAGGAGGA
EX746410       --> AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA
EY897161       --> AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA
FD562318       --> AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA
FY439985       --> AAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGA

               401    -    451
UN17457        --> GTTCCAACTTGCCTTGTTTAAGAGCAGGAAAAGGGAGAATATATTTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- GTTCCAACTTGCCTTGTTTAAGAGCAGGAAAAGGGAGAATATATTTGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750822       <-- GTTTCAACTTGCCTTGTTTAAGAGCAGGAAGAGGGAGAATATATTTGCCA  Raphanus raphanistrum subsp. maritimus
FD566251       <-- ............................................TTGCCA  Raphanus sativus var. oleiformis
EV539136       --> GTTCCAACTTGCCTTGTTTAAGAGCAGGAAAAGGGAGAATATATTTGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746410       --> GTTTCAACTTGCCTTGTTTAAGAGCAGGAAGAGGGAGAATATATTTGCCA  Raphanus raphanistrum subsp. maritimus
EY897161       --> GTTTCAACTTGCCTTGTTTAAGAGCAGGAAGAGGGAGAATATATTTGCCA  Raphanus raphanistrum subsp. maritimus
FD562318       --> GTTCCAACTTGCCTTGTTTAAGAGCAGGAAAAGGGAGAATATATTTGCCA  Raphanus sativus var. oleiformis
FY439985       --> GTTCCAACTTGCCTTGTTTAAGAGCAGGAAAAGGGAGAATATATTTGCCA  Raphanus sativus cv GSK3-1

               451    -    501
UN17457        --> ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
EX750822       <-- ACAGGATATTTGATATGTTTGATGTTAAACGAA-GGGAGTAATTGATTTT
FD566251       <-- ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
EV539136       --> ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
EX746410       --> ACAGGATATTTGATATGTTTGATGTTAAACGAA-GGGAGTAATTGATTTT
EY897161       --> ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
FD562318       --> ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT
FY439985       --> ACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTT

               501    -    551
UN17457        --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750822       <-- GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus raphanistrum subsp. maritimus
FD566251       <-- GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus sativus var. oleiformis
EV539136       --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746410       --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus raphanistrum subsp. maritimus
EY897161       --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCT--AGA  Raphanus raphanistrum subsp. maritimus
FD562318       --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus sativus var. oleiformis
FY439985       --> GGAGACTTTGTAAGATCACTCAATGTGTTCCACCCCAATGCTTCTCTAGA  Raphanus sativus cv GSK3-1

               551    -    601
UN17457        --> GGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- GGACAAAATTGATTTTACGTTTAGGCTCTATGACATGGACTGCACGGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750822       <-- AGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT  Raphanus raphanistrum subsp. maritimus
FD566251       <-- GGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT  Raphanus sativus var. oleiformis
EV539136       --> GGACAAAATTGATTTTACGTTTAGGCTCTATGACATGGACTGCACGGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746410       --> AGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT  Raphanus raphanistrum subsp. maritimus
EY897161       --> AGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT  Raphanus raphanistrum subsp. maritimus
FD562318       --> GGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTT  Raphanus sativus var. oleiformis
FY439985       --> AGACAAAATTGATTTTACGTTTAGGCTCTATGACATGGACTGCACGGGTT  Raphanus sativus cv GSK3-1

               601    -    651
UN17457        --> TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX750822       <-- TCATTGAACGATAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus raphanistrum subsp. maritimus
FD566251       <-- TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus sativus var. oleiformis
EV539136       --> TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746410       --> TCATTGAACGATAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus raphanistrum subsp. maritimus
EY897161       --> TCATTGAACGACAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus raphanistrum subsp. maritimus
FD562318       --> TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGA-  Raphanus sativus var. oleiformis
FY439985       --> TCATTGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAA  Raphanus sativus cv GSK3-1

               651    -    701
UN17457        --> TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC
EX750822       <-- TCTGAAATGAAGTTGGCTG-TGAAACCATAGAGATAATATTAGATAAGAC
FD566251       <-- TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC
EV539136       --> TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC
EX746410       --> TCTGAAATGAAGTTGGCTG-TGAAACCATAGAGATAATATTAGATAAGAC
EY897161       --> TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC
FD562318       --> TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATA-GAC
FY439985       --> TCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATATTAGATAAGAC

               701    -    751
UN17457        --> ATTTGAGGATGCAGACGTGAATCAGGATGGAAAGATTGATAAATTAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- ATTTGAGGATGCAGACGTGAATCAGGATGGAAAGATTGATAAATTAGAGT
EX750822       <-- ATTTGAGGATGCAGACGTTAATCAGGATGGAAAGATTGATAAATTAGAGT
FD566251       <-- ATTTGAGGATGCAGACGTGAATCAGGATGGAAAGATTGATAAATTAGAGT
EV539136       --> ATTTGAG-ATGCAGACGTGAA.............................
EX746410       --> ATTTGAG-ATGCAGACGTTAATCAG-ATGGAAAGATTGATAAATTAGAGT
EY897161       --> ATTTGAG-ATGCA.....................................
FD562318       --> ATTTGAGGATGCAGACGTGAA.............................
FY439985       --> ATTTGAGGATGCAGACGTGAATCAGGATGGAAAGATTGATAAATTAGAGT

               751    -    801
UN17457        --> GGAGAGATTTCGTGAACAAAAATCCATCACTGCTTAAGATCATGACACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- GGAGGGACTTCGTGAACAAAAATCCATCACTGCTTAAGATCATGACACTC
EX750822       <-- GGAGAGATTTCGTGAACAAAAATCCATCACTGCCTAAGATCATGACACTC
FD566251       <-- GGAGAGATTTCGTGAACAAAAATCCATCACTGCTTAAGATCATGACACTC
EV539136       --> ..................................................
EX746410       --> GGAGAGATT-CGTGA-CAAAA-TCCATCACTGCCTAAGATCATGACACTC
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> GGAGGGATTTCGTGAACAAAAATCCATCACTGCTTAAGATCATGACACTC

               801    -    851
UN17457        --> CCATATCTCAGGGATATTACAACAACGTTTCCGAGCTTTGTCTTTAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- CCATATCTCAGGGATATTACTACAACGTTTCCGAGCTTTGTCTTTAATTC
EX750822       <-- CCATATCTCAGGGATATTACAACAACGTTTCCGAGCTTTGTCTTCAATTC
FD566251       <-- CCATATCTCAGGGATATTACAACAACGTTTCCGAGCTTTGTCTTTAATTC
EV539136       --> ..................................................
EX746410       --> CCATATC...........................................
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> CCATATCTCAGGGATATTACAACAACGTTTCCGAGCTTTGTCTTCAATTC

               851    -    901
UN17457        --> TGAGGTCGATGAGATTGCCACATGAAGAAACTGGTTTCACAAAGTTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TGAGGTCGATGAGATTGCCACATGAAGAAACGGGTTTCACAAAGTTTGAA
EX750822       <-- TGAGGTCGATGAGATTGCCACATGAAGAAACTGGTTCCTCAAAGTTTGAA
FD566251       <-- TGAGGTCGATGAGATTGCCACATAAAGAAACAGGTTTCACAAAGTGCGAA
EV539136       --> ..................................................
EX746410       --> ..................................................
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> TGAGGTCGATGAGATTGCCGCAT...........................

               901    -    951
UN17457        --> GAAAAGAAGAAGAAAGAACAAGACCAGTTCTGAGTTGATCAGCATCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- GAAAAGAAGAAGAAAGAACTAAACCAGTTCTGAGTTGATCAGCATCTGTT
EX750822       <-- GAAAAGAAGAAGAAAGAACAAGACCAGTTCTGAGTTGATCAGCATCTGTT
FD566251       <-- GGAAAGAAGAAGAAAGAACAAGACCAGTTCTGAGTTGATCAGCATGTGTT
EV539136       --> ..................................................
EX746410       --> ..................................................
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> ..................................................

               951    -   1001
UN17457        --> TGCAAATACTGTAGAGCTAGAGCATATCTTTTTTTTTTTAATTGTTTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TGCAAATACTGTAGAGCTAGAGCATATCTTTTTTTTTTTAATTGTTTAAT
EX750822       <-- TGCAAATACTGTAGAGCTAGAGCATATCTTTTTTTTTTTTAATGTTTAAT
FD566251       <-- TGCAAATACTGTAGAGCTAGAGCATATCTTTTTTTAAAAAATTGTTTAAT
EV539136       --> ..................................................
EX746410       --> ..................................................
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> ..................................................

               1001   -   1051
UN17457        --> TTTCTGGGTTCCTATTTAATTCTCAGAACAGTTTTGAAATCTTGAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TTTCTGGGTTCCTATTTAATTCTCAGAACAGTTTTGAAATCTTGAGTTTT
EX750822       <-- TTTCTGGGTTCCTATCTAATTCTCAGAACAGTTTTGAAATCTTGAGTTTT
FD566251       <-- TTTCTGGGTTCCTATTTAATTCTCAGAACAGTTTTG..............
EV539136       --> ..................................................
EX746410       --> ..................................................
EY897161       --> ..................................................
FD562318       --> ..................................................
FY439985       --> ..................................................

               1051   -   1101
UN17457        --> TTAGCTTAAAAAGTGTATCATCAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543001       <-- TTAGCT.....................
EX750822       <-- TTAGCTTAAAAAGTGTATCATCAATCC
FD566251       <-- ...........................
EV539136       --> ...........................
EX746410       --> ...........................
EY897161       --> ...........................
FD562318       --> ...........................
FY439985       --> ...........................