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Alignment for radish unigene UN17459

               1      -     51
UN17459        --> GGGCGTCTCACTTCTCTCTCTCACCGTCTCACCGCTTTCGAA-GTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ..................................................
FD573689       <-- ..................................................
EX767294       <-- ..................................................
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> GGGCGTCTCACTTCTCTCTCTCACCTTCTCACCGCTTTCGAA-GTAACAA
EV549934       --> .GGCGTCTCACTTCTCTCTCTCACCGTCTCACCGCTTTCGAA-GTAACAA
EX763169       --> ..ggGTCTCACTTCTCTCTCTCACCGTCTCACCGCTTTCGAA-GTAACAA
FD541043       --> ........gACTTCTCTCTCTCACCGTCTCACCGCTTTGGAA-GTAACAA
EV525666       --> .........ggactTCTCTCTCACCGTCTCACCGCTTTCGAAAGTAACAA
EY949350       --> .................ggacttctcTCTCACCGCTTTCGAAAGTAACAA
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               51     -    101
UN17459        --> TGCCGCAGGGAGATTATATCGATTTGCACCAGAAGAGGCATGGACGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ..................................................
FD573689       <-- ..................................................
EX767294       <-- ..................................................
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> TGCCGCAGGGAGATTATATCGATTTGCACCAGAAGAGGCATGGACGCCGC
EV549934       --> TGCCGCAGGGAGATTATATCGATTTGCACCAGAAGAGGCATGGACGCCGC
EX763169       --> TGCCGCAGGGAGATTGTATCGATTTGCACCAGAAGAGGCATGGACGCCGC
FD541043       --> TGCCGCAGGGAGATTATATTGATTTGCACCAGAAGAGGCATGGACGCCGC
EV525666       --> TGCCGCAGGGAGATTATATCGATTTGCACCAGAAGAGGCATGGACGCCGA
EY949350       --> TGCCGCAGGGAGATTATATCGATTTGCACCAGAAGAGGCATGGACGCCGC
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               101    -    151
UN17459        --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ..................................................
FD573689       <-- ..................................................
EX767294       <-- ..................................................
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
EV549934       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
EX763169       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
FD541043       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
EV525666       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCGCGTGCAGTTCACAA
EY949350       --> CTCGATTACGAAGAGCGCAAGCGCAAGAAGGAGGCTCGTCAAGTTCACAA
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               151    -    201
UN17459        --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ........................TATAGGTATAAAGGGTAAGATGATTG
FD573689       <-- ..................................................
EX767294       <-- ..................................................
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> GCGCTCCAAGCAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
EV549934       --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
EX763169       --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
FD541043       --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
EV525666       --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
EY949350       --> GCGCTCCAAACAGGCTCAGAATTCTATAGGTATAAAGGGTAAGATGATTG
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               201    -    251
UN17459        --> CTAAGAAAAACTATGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- CTAAGAAAAACTACGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
FD573689       <-- ........AACTACGCCGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EX767294       <-- ...........ttTGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> CTAAGAAAAACTATGCTGAGAAAGCTCAAATGAAGAAGACATTGAAGATG
EV549934       --> CTAAGAAAAACTATGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EX763169       --> CTAAGAAAAATTATGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
FD541043       --> CTAAGAAAAACTACGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EV525666       --> CTAAGAAAAACTATGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EY949350       --> CTAAGAAAAACTACGCTGAGAAAGCTCAAATGAAGAAAACATTGAAGATG
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               251    -    301
UN17459        --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
FD573689       <-- CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EX767294       <-- CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EV549934       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EX763169       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
FD541043       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EV525666       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EY949350       --> CATGAGGAGAGTTCATCAAGGCGTAAAACTGATGAGGATGTTCAGGAAGG
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               301    -    351
UN17459        --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
FD573689       <-- AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EX767294       <-- AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EV549934       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EX763169       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
FD541043       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EV525666       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EY949350       --> AGCTGTTCCTGCTTATCTTCTTGATCGTGAGAATACCTCTCGGGCCAAGG
EX905911       --> ..................................................
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               351    -    401
UN17459        --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGCAAGTGG
FD573689       <-- TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
EX767294       <-- TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
EY944881       <-- ..................................................
EX892635       <-- ..................................................
FD971333       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
EV549934       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGCAAGTGG
EX763169       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
FD541043       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
EV525666       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGCAAGTGG
EY949350       --> TTCTTAGCAACACTATTAAACAAAAGAGGAAAGAGAAAGCTGGGAAGTGG
EX905911       --> ................................................GG
EX888750       --> ..................................................
EX746504       --> ..................................................
FD568744       --> ..................................................

               401    -    451
UN17459        --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
FD573689       <-- GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EX767294       <-- GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EY944881       <-- .............CAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EX892635       <-- ...................................gGATGAGATGTTCAG
FD971333       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EV549934       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EX763169       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
FD541043       --> GAGGTTCCTCTGCCTAAGGTCCGCCCCGTGGCTGAAGATGAGATGTTCAG
EV525666       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EY949350       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EX905911       --> GAGGTTCCTCTGCCAAAGGTCCGTCCCGTGGCTGAAGATGAGATGTTCAG
EX888750       --> ...................................gGATGAGATGTTCAG
EX746504       --> ..................................................
FD568744       --> ..................................................

               451    -    501
UN17459        --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
FD573689       <-- AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX767294       <-- AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EY944881       <-- AGTCATCGGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX892635       <-- AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
FD971333       --> AGTGATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EV549934       --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX763169       --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
FD541043       --> AGTGATCAGATCTGGGAAGAGGAAAACGAAACAGTGGAAGAGGATGGTTA
EV525666       --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EY949350       --> AGTCATCGGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX905911       --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX888750       --> AGTCATCAGATCTGGGAAGAGGAAAACAAAACAGTGGAAGAGGATGGTTA
EX746504       --> ..................................................
FD568744       --> ..................................................

               501    -    551
UN17459        --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
FD573689       <-- CAAAAGCTACATTTGTTGGAC-TGGTTTCACTAGGAAGCCGCCAAAGTAC
EX767294       <-- CAAAAGCTACATTTGTTGGACCTGGTTTCACAAGGAAGCCGCCAAAGTAC
EY944881       <-- CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EX892635       <-- CAAAAGCTACATTTGTTGGAC-TGGTTTCACTAGGAAGCCGCCAAAGTAC
FD971333       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACAAGGAAGCCGCCAAAGTAC
EV549934       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EX763169       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACAAGGAAGCCGCCAAAGTAC
FD541043       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EV525666       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EY949350       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EX905911       --> CAAAAGCTACATTTGTTGGACCTGGTTTCACTAGGAAGCCGCCAAAGTAC
EX888750       --> CAAAAGCTACATTTGTTGGAC-TGGTTTCACTAGGAAGCCGCCAAAGTAC
EX746504       --> ................................................AC
FD568744       --> ..................................................

               551    -    601
UN17459        --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
FD573689       <-- GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EX767294       <-- GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTTAC
EY944881       <-- GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EX892635       <-- GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
FD971333       --> TAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTTAC
EV549934       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EX763169       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTTAC
FD541043       --> GAGCAATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EV525666       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EY949350       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAAGCCCACGTCAC
EX905911       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EX888750       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
EX746504       --> GAGCGATTCATCCGCCCTTCTGGACTTCGTTTCACCAAGGCCCACGTCAC
FD568744       --> ..................................................

               601    -    651
UN17459        --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus raphanistrum subsp. landra
FD573689       <-- TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus sativus cv Early Scarlet Globe
EX767294       <-- TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944881       <-- TCACCCTGAGTTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX892635       <-- TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus sativus var. oleiformis
FD971333       --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549934       --> TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763169       --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541043       --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525666       --> TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus raphanistrum subsp. maritimus
EY949350       --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX905911       --> TCACCCTGAGCTAAGATGCACTTTCTGTCTTGAGATCATCGGGATCAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX888750       --> TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus sativus var. oleiformis
EX746504       --> TCACCCTGAACTAAGATGCACTTTCTGTCTTGAGATCATCGGAATCAAGA  Raphanus raphanistrum subsp. maritimus
FD568744       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN17459        --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
FD573689       <-- AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
EX767294       <-- AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
EY944881       <-- AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
EX892635       <-- AGAATCCCAACGGTCCAATGTACACATCGCTTGGTGTCATGACCAGAGGA
FD971333       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCA.....
EV549934       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACC......
EX763169       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
FD541043       --> AGAATCCCAACGGTCCAATGTATACATCGTTTGGTGTCATGACCAGAGGA
EV525666       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
EY949350       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACC......
EX905911       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
EX888750       --> AGAATCCCAACGGTCCAATGTACACATCGCTTGGTGTCATGACCAGAGGA
EX746504       --> AGAATCCCAACGGTCCAATGTATACATCGCTTGGTGTCATGACCAGAGGA
FD568744       --> ..................................................

               701    -    751
UN17459        --> ACAATCATTGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ACAATCATTGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus raphanistrum subsp. landra
FD573689       <-- ACAATCATTGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus cv Early Scarlet Globe
EX767294       <-- ACAATCATTGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944881       <-- ACAATCATTTAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX892635       <-- ACAATCATCGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus var. oleiformis
FD971333       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549934       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763169       --> ACAATCATTGAG-TCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541043       --> catcat............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525666       --> ACAATCATCGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus raphanistrum subsp. maritimus
EY949350       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905911       --> ACAATCATTGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX888750       --> ACAATCATCGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus var. oleiformis
EX746504       --> ACAATCATCGAGGTCAATGTGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus raphanistrum subsp. maritimus
FD568744       --> ...................gGAGTGAGCTTGGTCTTGTTACACCAGCTGG  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN17459        --> AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
FD573689       <-- AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
EX767294       <-- AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
EY944881       <-- AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
EX892635       <-- AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
FD971333       --> ..................................................
EV549934       --> ..................................................
EX763169       --> AAA-GTTGTCTGGGGGAAGT..............................
FD541043       --> ..................................................
EV525666       --> AAAAGTTGTCTGGGGGAAGTACGC..........................
EY949350       --> ..................................................
EX905911       --> AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
EX888750       --> AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
EX746504       --> AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG
FD568744       --> AAAAGTTGTCTGGGGGAAGTACGCTCAGGTGACAAACAATCCAGAGAATG

               801    -    851
UN17459        --> ACGGATGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ACGGATGTATAAACGCTGTTCTGCTTGTGTGATCAAAATCTCCGGCGAGA  Raphanus raphanistrum subsp. landra
FD573689       <-- ACGGATGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus sativus cv Early Scarlet Globe
EX767294       <-- ACGGGTGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944881       <-- ACGGATGTATAAACGCTGTTCTGCTTGTGTAATCAAAATTTCCGGCGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX892635       <-- ACGGGTGTATAAACGCTGTTCTGCTTGTGTAATCAAAATTTCCGGCGAGA  Raphanus sativus var. oleiformis
FD971333       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549934       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763169       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525666       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY949350       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905911       --> ACGGATGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX888750       --> ACGGGTGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus sativus var. oleiformis
EX746504       --> ACGGGTGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus raphanistrum subsp. maritimus
FD568744       --> ACGGATGTATAAACGCTGTTCTGCTTGTGTAATCAAAATCTCCGGCGAGA  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN17459        --> ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACTGAAACAATTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACCGAAACAATTTTGTC  Raphanus raphanistrum subsp. landra
FD573689       <-- ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus cv Early Scarlet Globe
EX767294       <-- ATCATGTTGTTTACTCTTTT--TTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944881       <-- ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX892635       <-- ATCATGTTGTTTACTTTT----TTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus var. oleiformis
FD971333       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549934       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763169       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525666       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY949350       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905911       --> ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX888750       --> ATCATGTTGTTTACTTTTTTT----TGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus var. oleiformis
EX746504       --> ATCATGTTGTTTACTTTTTTT--TTTGTTCTCTACTGAAACAATTTTGTC  Raphanus raphanistrum subsp. maritimus
FD568744       --> ATCATGTTGTTTACTTTTTTTCTTTTGTTCTCTACTGAAACAATTTTGTC  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN17459        --> TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATACATTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV573911       <-- TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATACATTTTAAG  Raphanus raphanistrum subsp. landra
FD573689       <-- TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATACATTTTAAG  Raphanus sativus cv Early Scarlet Globe
EX767294       <-- TTTAACTC-AGCCTTTTTTTATGTATCGGTGTGC................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944881       <-- TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATAC........  Raphanus sativus cv Rat-Tail Radish #3870
EX892635       <-- TTTAACTCAAGC---TTTTTATTTATCGGTGTTCTTTATTAC........  Raphanus sativus var. oleiformis
FD971333       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549934       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763169       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525666       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY949350       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905911       --> TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATACATTTTAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX888750       --> TTTAACTCAAGC---TTTTTATTTATCGGTGTTCTTTATTAC........  Raphanus sativus var. oleiformis
EX746504       --> TTTAACTCAAGC---TTTTTATTTATCGGTGTTCTTTATTACATTTTAAG  Raphanus raphanistrum subsp. maritimus
FD568744       --> TTTAACTCCAGC---TTTTTATGTATCGGTGTGCTTTAATACATTTTAAG  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN17459        --> CAAGCCTCCTTTCTGT..
                   ~~~~~~~~~~~~~~~~~~
EV573911       <-- CAAACCTCCTTTCTGTt.
FD573689       <-- CAAGCCTCCTTTCTGTcg
EX767294       <-- ..................
EY944881       <-- ..................
EX892635       <-- ..................
FD971333       --> ..................
EV549934       --> ..................
EX763169       --> ..................
FD541043       --> ..................
EV525666       --> ..................
EY949350       --> ..................
EX905911       --> CAAGCCTCCTTTC.....
EX888750       --> ..................
EX746504       --> CAAGCCT...........
FD568744       --> CAAGCCT...........