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Alignment for radish unigene UN17482

               1      -     51
UN17482        --> CGAAGGAAATGATTTGCATTAAAAGGTGAGTATGTTTCGCATATATCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ....................agAAGGTGAGTATGTTTCGCATATATCATA
EY929383       <-- ............................AGTATGTTTCGCATATATCATA
FD946485       <-- ............................AGTATGTTTCGCATATATCATA
FD942596       --> CGAAGGAAATGATTTGCATTAAAAGGTGAGTATGTTTCGCATATATCATA
FD547868       --> ............TTTGCATTAAAAGGTGAGTATGTTTCGCATATATCATA
FD565867       --> ............TTTGCATTAAAAAGTGAGTATGTTTTGCATATATCATA
FD937204       --> ............TTTGCATTAAAAAGTGAGTATGTTTCGCATATATCATA
EY904206       --> ...............aCATTAAAAGGTGAGTATGTTTCGCATATATCATA
FD958673       --> ....................AAAAGGTGAGTATGTTTCGCATATATCATA
FD982439       --> ....................AAAAGGTGAGTATGTTTCCCATATATCATA
FD945237       --> ....................agAAGGTGAGTATGTTTCGCATATATCATA
EY925829       --> ............................AGTATGTTTCGCATATATCATA

               51     -    101
UN17482        --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
EY929383       <-- AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
FD946485       <-- AGATG-AGTACATGTAGCAT-ATCTATACAT-ACGT-GAAG-TCAAAGCA
FD942596       --> AGATGGAGTACATGTAGCATTATCTATACATTACGTGGAAGTTCAAAGCA
FD547868       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
FD565867       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
FD937204       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
EY904206       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
FD958673       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
FD982439       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTGAAAGCA
FD945237       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA
EY925829       --> AGATGGAGTACATGTAGCATTATCTATACATTACATGGAAGTTCAAAGCA

               101    -    151
UN17482        --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA-CA  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATA-----AA  Raphanus sativus var. oleiformis
FD946485       <-- TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA-CA  Raphanus sativus cv Early Scarlet Globe
FD942596       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA-CA  Raphanus sativus cv Early Scarlet Globe
FD547868       --> TGTGATGATAATAATAAAGAGAAAACTTGTTTGTAGGATAATAAAGA---  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA---  Raphanus sativus var. oleiformis
FD937204       --> TGTGATGATAATAATAAAGAGAAAACTTGTTTGTAGGATAATAAAGA---  Raphanus sativus var. oleiformis
EY904206       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA---  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> TGTGATGATAATAATAAAGAGAAAACTTGTTTGTAGGATAATAAAGA-CA  Raphanus raphanistrum subsp. maritimus
FD982439       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA-CA  Raphanus raphanistrum subsp. landra
FD945237       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA-CA  Raphanus sativus cv Early Scarlet Globe
EY925829       --> TGTGATGATAATAATAAAGAGAAGACTTGTTTGTAGGATAATAAAGA---  Raphanus sativus var. oleiformis

               151    -    201
UN17482        --> GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
EY929383       <-- GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD946485       <-- GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD942596       --> GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD547868       --> --CATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD565867       --> --CATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD937204       --> --CATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
EY904206       --> --CATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD958673       --> GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD982439       --> GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
FD945237       --> GACATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT
EY925829       --> --CATATTCAGTTCTTGTACTTCATGGTTTCTTTCTCAAACCCAATAGTT

               201    -    251
UN17482        --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTCGCAATCTC  Raphanus sativus var. oleiformis
FD946485       <-- GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus sativus cv Early Scarlet Globe
FD942596       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus sativus cv Early Scarlet Globe
FD547868       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTCGCAATCTC  Raphanus sativus var. oleiformis
FD937204       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTCGCAATCTC  Raphanus sativus var. oleiformis
EY904206       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus raphanistrum subsp. maritimus
FD982439       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus raphanistrum subsp. landra
FD945237       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTGGCTATCTC  Raphanus sativus cv Early Scarlet Globe
EY925829       --> GGGAACTGCTTAGCGAACTCCTCCACGTCGTGGCGCAGCTTCGCAATCTC  Raphanus sativus var. oleiformis

               251    -    301
UN17482        --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus sativus var. oleiformis
FD946485       <-- TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
FD942596       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
FD547868       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus sativus var. oleiformis
FD937204       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus sativus var. oleiformis
EY904206       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGTT  Raphanus raphanistrum subsp. maritimus
FD982439       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus raphanistrum subsp. landra
FD945237       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGTT  Raphanus sativus cv Early Scarlet Globe
EY925829       --> TGATTGGATGCCTGAAGACGATTCCATTGCTGACACAAAATCTTTCAGCT  Raphanus sativus var. oleiformis

               301    -    351
UN17482        --> TCGTTCCTTGAGCTTCAGATTTGACTTTGAGAGCCAACTTCACAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- TCGTTCCTTGAGCTTCAGATTTGACTCTGAGAGCCAACTTCACAGCTTTG  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- TCGTTCCTTGAGCTTCAGATTTGACTTTGAGTGCCAACTTCACAGCTTTG  Raphanus sativus var. oleiformis
FD946485       <-- TCGTTCCTTGAGCTTCAGATTTGACTCTGAGAGCCAACTTCACAGCTTTG  Raphanus sativus cv Early Scarlet Globe
FD942596       --> TCGTTCCTTGAGCTTCAGATTTGACTCTGAGAGCCAACTTCACAGCTTTG  Raphanus sativus cv Early Scarlet Globe
FD547868       --> TCGTTCCTTGAGCTTCAGATTTGACTTTGAGAGCCAGATTCACAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> TCGTTCCTTGAGCTTCAAATTTGACTTTGAGTGCCAACTTCACAGCTTTG  Raphanus sativus var. oleiformis
FD937204       --> TCGTTCCTTGAGCTTCAAATTTGACTTTGAGTGCCAACTTCACAGCTTTG  Raphanus sativus var. oleiformis
EY904206       --> TCGTTCCTTGAGCTTCAGATTTGACTTTGAGAGCCAGCTTCACAGCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> TCGTTCCTTGAGCTTCAGATTTGACTCTGAGAGCCAACTTCACAGCTTTG  Raphanus raphanistrum subsp. maritimus
FD982439       --> TCGTTCCTTCAGCTTCAGATTTGACTTTGAGAGCCAACTTCACAGCTTTG  Raphanus raphanistrum subsp. landra
FD945237       --> TCGTTCCTTGAGCTTCAGATTTGACTCTGAGAGCCAACTTCACAGCTTTG  Raphanus sativus cv Early Scarlet Globe
EY925829       --> TCGTTCCTTGAGCTTCAGATTTGACTTTGAGTGCCAACTTCACAGCTTTG  Raphanus sativus var. oleiformis

               351    -    401
UN17482        --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- TCAAAGTACTCGGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus var. oleiformis
FD946485       <-- TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus cv Early Scarlet Globe
FD942596       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus cv Early Scarlet Globe
FD547868       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> TCAAAGTACTCGGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus var. oleiformis
FD937204       --> TCAAAGTACTCGGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus var. oleiformis
EY904206       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus raphanistrum subsp. maritimus
FD982439       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCGACAAAACCTCTGGA  Raphanus raphanistrum subsp. landra
FD945237       --> TCAAAGTATTCAGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus cv Early Scarlet Globe
EY925829       --> TCAAAGTACTCGGCTACTTTGGCAAAGTCTTCCTCAACAAAACCTCTGGA  Raphanus sativus var. oleiformis

               401    -    451
UN17482        --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATAGCAGAAA  Raphanus sativus var. oleiformis
FD946485       <-- AGTGAGAGCAGGTGTACCCACTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus sativus cv Early Scarlet Globe
FD942596       --> AGTGAGAGCAGGTGTACCCACTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus sativus cv Early Scarlet Globe
FD547868       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATAGCAGAAA  Raphanus sativus var. oleiformis
FD937204       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATAGCAAAAA  Raphanus sativus var. oleiformis
EY904206       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus raphanistrum subsp. maritimus
FD982439       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus raphanistrum subsp. landra
FD945237       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATGGCAGAAA  Raphanus sativus cv Early Scarlet Globe
EY925829       --> AGTGAGAGCAGGTGTACCCATTCTGATTCCACCGGGAACCATAGCAGAAA  Raphanus sativus var. oleiformis

               451    -    501
UN17482        --> CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus cv Early Scarlet Globe
EY929383       <-- CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus var. oleiformis
FD946485       <-- CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus cv Early Scarlet Globe
FD942596       --> CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus cv Early Scarlet Globe
FD547868       --> CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGAACAGCTTCCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565867       --> CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus var. oleiformis
FD937204       --> CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus var. oleiformis
EY904206       --> CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGAACAGCTTCCAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958673       --> CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus raphanistrum subsp. maritimus
FD982439       --> CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGaa...........  Raphanus raphanistrum subsp. landra
FD945237       --> CATCTCCAGGGACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus cv Early Scarlet Globe
EY925829       --> CATCTCCAGGAACAGTGTTTTTGTTGGATGCAATGTGGACAGCTTCCAAC  Raphanus sativus var. oleiformis

               501    -    551
UN17482        --> ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ACc...............................................
EY929383       <-- ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAG
FD946485       <-- ACTTTCTCAACTCCAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAA
FD942596       --> ACTTTCTCAACTCCAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAA
FD547868       --> ACTTTCTCAACTCTAGATCCATCAATTCCTTTGGGCTTCAGGTTCACTAG
FD565867       --> ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAG
FD937204       --> ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAG
EY904206       --> ACTTTCTCAACTCTAGATCCATCAATTCCTTTGGGCTTCAGGTTCACTAG
FD958673       --> ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAA
FD982439       --> ..................................................
FD945237       --> ACc...............................................
EY925829       --> ACTTTCTCAACTCTAGATCCATCAATTCCCTTGGGCTTCAGGTTCACTAG

               551    -    601
UN17482        --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ..................................................
EY929383       <-- AACCAGATGGTTGTC...................................
FD946485       <-- AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
FD942596       --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
FD547868       --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
FD565867       --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
FD937204       --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
EY904206       --> AACCAGATGGTTGTCAGTTCCAC...........................
FD958673       --> AACCAGATGGTTGTCAGTTCCACCAGAAACAAGTTCATAACCTCTCTCCA
FD982439       --> ..................................................
FD945237       --> ..................................................
EY925829       --> AACCAGATGGTTGTC...................................

               601    -    651
UN17482        --> TCAGAGTCTGAGCAAACTTTGCAGAGTTACTCAGGACTTGCTCTTGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ..................................................
EY929383       <-- ..................................................
FD946485       <-- TCAGAGT--CAGCAAACTTTGCAGAGTTACTCAGGACTTGCTCTTGGTAT
FD942596       --> TCAGAGTC--AGCAAACTTTGCAGAGTTACTCAGGACTTGCTCTTGGTAT
FD547868       --> CCAGAGTCTGAGCAAACTTTGCAGAGTTACTCAGGACTTGCTCTTGGTAC
FD565867       --> TCAGAGTCTGAGCAAACTTTGCAGAGTTACTCAGGACTTGTTCTTGGTAT
FD937204       --> TCAGAGTCTGAGCAAACTTTGCAGAGTTACTCAGGACTTGTTCTTGGTAT
EY904206       --> ..................................................
FD958673       --> TCAGAGTCTGAGCAAACTTTGCAGAGTTACT...................
FD982439       --> ..................................................
FD945237       --> ..................................................
EY925829       --> ..................................................

               651    -    701
UN17482        --> GCTTTGTACTCTGAAGTAGTTGCCTGTTTTAAAGCAACAGCTAGTCCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ..................................................
EY929383       <-- ..................................................
FD946485       <-- GCTTTGTACTCTGAAGTAGTTGCCTGTTTTAAAGCAACAGCTAGTCCTGT
FD942596       --> GCTTTGTACT........................................
FD547868       --> GCTTTGTACTCTGAAGTAGTTGCCTGTTTTAAAGCAACAGCTAGTCCTGT
FD565867       --> GCTTTGTACTCTGAAGTAGTTGCCTGTTTTAAAGCAACAGCTAGTCCTGT
FD937204       --> GCTTTGTACTCTGAAGTAGTTGCCTGTTTTAAAGCAACAGCTAGTCCTGT
EY904206       --> ..................................................
FD958673       --> ..................................................
FD982439       --> ..................................................
FD945237       --> ..................................................
EY925829       --> ..................................................

               701    -    751
UN17482        --> AATAGTGTGGTTGTGTGGACCACCTTGAAGACCAGGGAAGACAGCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ..................................................
EY929383       <-- ..................................................
FD946485       <-- AATAGTGTGGTTGTGTGGACCACCTTGAAGACCAGGGAAGACAGCTTGAT
FD942596       --> ..................................................
FD547868       --> AACAGTGTGGTTGTGTGGACCACCTTGAAGACCAGGGAAGACAGCTTGAT
FD565867       --> AATAGTGTGGTTGTGTGGACCACCTTGAAGACCAGGGAAGACAGCTTGAT
FD937204       --> AATAGTGTGGTTGTGTGGACCACCTTGAAGACCAGGGAAGACAGCTTGAT
EY904206       --> ..................................................
FD958673       --> ..................................................
FD982439       --> ..................................................
FD945237       --> ..................................................
EY925829       --> ..................................................

               751    -    801
UN17482        --> TGATCTTGTCTTCATAATCATACAAAACCTCTTTCCCTTGTTTGTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ..................................................
EY929383       <-- ..................................................
FD946485       <-- TGATCTTGTCTTCATAATCATACAAAACCTCTTTCCCTTc..........
FD942596       --> ..................................................
FD547868       --> TGATCTTGTCTTCATAATCA..............................
FD565867       --> TGATCTTGTCTTCATAATCATACAAA-CCTCTT.................
FD937204       --> TGATCTTGTCTTCATAATCATACAAAACCTCTTTCCCTTGTTTGTTATTT
EY904206       --> ..................................................
FD958673       --> ..................................................
FD982439       --> ..................................................
FD945237       --> ..................................................
EY925829       --> ..................................................

               801    -    851
UN17482        --> CCTTAACACCCTTTCTGTAGAAATCATGGCTCCACGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD949612       <-- ........................................
EY929383       <-- ........................................
FD946485       <-- ........................................
FD942596       --> ........................................
FD547868       --> ........................................
FD565867       --> ........................................
FD937204       --> CCTTAACACCCTTTCTGTAGAAATCATGGCTCCACGAGGT
EY904206       --> ........................................
FD958673       --> ........................................
FD982439       --> ........................................
FD945237       --> ........................................
EY925829       --> ........................................