RadishBase

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Alignment for radish unigene UN17509

               1      -     51
UN17509        --> CGCATCATCAAATCCTCATAAGATAGACTCAAGATAAATGTCATGACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- CGCATCATCAAATCCTCATAAGATAGACTCAAGATAAATGTCATGACATA
EY941779       <-- .....CATCAAATCCTCATAAGATAGACTCAAGATAAATGCCATGACATA
EW723638       <-- ......gcCAAATCCTCATAAGATAGACTCAAGATAAATGTCATGACATA
EX764068       <-- ........................gGACTCAAGATAAATGTCATGACATA
EY946941       <-- ...............................AGATAAATGTCATGACATA
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> CGCATCATCAAATCCTCATAAGATAGACTCAAGATAAATGTCATGACATA
EY937281       --> .....CATCAAATCCTCATAAGATAGACTCAAGATAAATGCCATGACATA
EW727874       --> ......gcCAAATCCTCATAAGATAGACTCAAGATAAATGTCATGACATA
FY429691       --> ..............cctcTAAGATAGACTCAAGATAAATGTCATGACATA
EX768062       --> ........................gGACTCAAGATAAATGTCATGACATA
EX901212       --> ...............................AGATAAATGTCATGACATA
FY431827       --> ........................................gCATGACATA

               51     -    101
UN17509        --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EY941779       <-- GTAACGTTACATATATGTCTTGTTGGTTTTATTACAA-GTCTTCAGATGG
EW723638       <-- GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EX764068       <-- GTAACGTTACATACATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EY946941       <-- GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EY937281       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAA-GTCTTCAGATGG
EW727874       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
FY429691       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EX768062       --> GTAACGTTACATACATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
EX901212       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG
FY431827       --> GTAACGTTACATATATGTCTTGTTGGTTTTATTACAAAGTCTTCAAATGG

               101    -    151
UN17509        --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EY941779       <-- ACAAAGGAGTGGAATTTATTTAATAGACCTCCGTAAGCTTTTGTCCTTCG
EW723638       <-- ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EX764068       <-- ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EY946941       <-- ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGCCCTTCG
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EY937281       --> ACAAAGGAGTGGAATTTATTTAATAGACCTCCGTAAGCTTTTGTCCTTCG
EW727874       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
FY429691       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EX768062       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
EX901212       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG
FY431827       --> ACAAAGGAGTGGAATTTATTTAATAGACC---GTAAGCTTTTGTCCTTCG

               151    -    201
UN17509        --> GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
EY941779       <-- GATACAACAAGACTTGAT-----AGAATTGGAAACAAGCTTACCTGTACT
EW723638       <-- GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
EX764068       <-- GATACAACAAGACTTGAT-----AGAGTTGAAAACAAGCTTACCTGTACT
EY946941       <-- GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
EY937281       --> GATACAACAAGACTTGAT-----AGAATTGGAAACAAGCTTACCTGTACT
EW727874       --> GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
FY429691       --> GATACAACAAGACTTGATTACATAGAGTTGGAAACAAGCTTACCTGTACT
EX768062       --> GATACAACAAGACTTGAT-----AGAGTTGAAAACAAGCTTACCTGTACT
EX901212       --> GATACAACAAGACTTGAT-----AGAGTTGGAAACAAGCTTACCTGTACT
FY431827       --> GATACAACAAGACTTGATTACATAGAGTTGGAAACAAGCTTACCTGTACT

               201    -    251
UN17509        --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGAGAAGTCC
EY941779       <-- GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCT
EW723638       <-- GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCC
EX764068       <-- GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAATCT
EY946941       <-- GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCC
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAAAAAAGTCC
EY937281       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCT
EW727874       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAACAGGGAAGTCC
FY429691       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCT
EX768062       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAATCT
EX901212       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCC
FY431827       --> GAGGAGCAAGTTCACCGTCCTTAACGATGTAGTTCTGAGCAGGGAAGTCT

               251    -    301
UN17509        --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
EY941779       <-- TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTC..............
EW723638       <-- TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
EX764068       <-- TCTCCCTTAAAATACTTCTCCAACA--TCTTTCGTCCCCGCCGCATATCG
EY946941       <-- TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
EY937281       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTC..............
EW727874       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
FY429691       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG
EX768062       --> TCTCCCTTAAAATACTTCTCCAACAT--CTTTCGTCCCCGCCGCATATCG
EX901212       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCATCCCCGCCGCATATCG
FY431827       --> TCTCCCTTAAAATACTTCTCCAACATATCTTTCGTCCCCGCCGCATATCG

               301    -    351
UN17509        --> TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGGGGAGTCATGGCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY941779       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW723638       <-- TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Early Scarlet Globe
EX764068       <-- TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGAGGAGTCATGGCTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946941       <-- TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY429470       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438557       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454101       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454659       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449136       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451188       <-- ..................................................  Raphanus sativus cv GSK3-1
FY447733       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446295       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449958       <-- ..................................................  Raphanus sativus cv GSK3-1
HS106994       <-- ..................................................  Raphanus sativus var. niger
FY448679       <-- ..................................................  Raphanus sativus cv GSK3-1
FY436751       <-- ..................................................  Raphanus sativus cv GSK3-1
FD581951       --> TAGCTGTGCATCAATGGTGGTGCCAAAAATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY937281       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727874       --> TAACTGTGCATCAATGGTGGTGCCAGAAATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Early Scarlet Globe
FY429691       --> TAGCTGTGCATCAATGGTGGTGCCAGAAATGTGAGGAGTCATGGCTTGGT  Raphanus sativus cv GSK3-1
EX768062       --> TAGCTGTGCATCAATGGTGGTGCCAGAAATGTGAGGAGTCATGGCTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901212       --> TAGCCGTGCATCAATGGTGGTGCCAGAGATGTGGGGAGTCATGGCTTGGT  Raphanus sativus cv Early Scarlet Globe
FY431827       --> TAGCTGTGCATCAATGGTGGTGCCAGAGATGTGAGGAGTCATGGCTTGGT  Raphanus sativus cv GSK3-1

               351    -    401
UN17509        --> TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY941779       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW723638       <-- TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Early Scarlet Globe
EX764068       <-- TAGGCATGTAACGCCATGGATGGTCCTTAGGAGCCGGCTGCGGGTCCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946941       <-- TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Rat-Tail Radish #3870
FY429470       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438557       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454101       <-- ..................................................  Raphanus sativus cv GSK3-1
FY454659       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449136       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451188       <-- ..................................................  Raphanus sativus cv GSK3-1
FY447733       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446295       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449958       <-- ..................................................  Raphanus sativus cv GSK3-1
HS106994       <-- ..................................................  Raphanus sativus var. niger
FY448679       <-- ..................................................  Raphanus sativus cv GSK3-1
FY436751       <-- ..................................................  Raphanus sativus cv GSK3-1
FD581951       --> TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY937281       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727874       --> TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Early Scarlet Globe
FY429691       --> TAGGCATGTAACGCCATGGATGGTCCTTAGGAGCCGGCTGCGGGTCCCAC  Raphanus sativus cv GSK3-1
EX768062       --> TAGGCATGTAACGCCATGGATGGTCCTTAGGAGCCGGCTGCGGGTCCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901212       --> TAGGCATGTAACGCCATGGATGGTCTTTAGGAGCTGGCTGCGGGTCCCAC  Raphanus sativus cv Early Scarlet Globe
FY431827       --> TAGGCATGTAACGCCATGGATGGTCCTTAGGAGCCGGCTGCGGGTCCCAC  Raphanus sativus cv GSK3-1

               401    -    451
UN17509        --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
EY941779       <-- ..................................................
EW723638       <-- ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
EX764068       <-- ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTTTCCACCGCCTCAACCAC
EY946941       <-- ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
FY429470       <-- ..................................................
FY438557       <-- ..................................................
FY454101       <-- ..................................................
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
EY937281       --> ..................................................
EW727874       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
FY429691       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
EX768062       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTTTCCACCGCCTCAACCAC
EX901212       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC
FY431827       --> ACGTCTCCGCTGTACCCTCCGATGTGTCCGCTCTCCACCGCCTCAACCAC

               451    -    501
UN17509        --> CGCTTGCCTATCCATGATGGCTCCTCTCGCGTTGTTTACAATCAAAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- CGCTTGCCTATCCATGATGGCTCCTCTCGCGTTGTTTACAATCAAAACGC
EY941779       <-- ..................................................
EW723638       <-- CGCTTGCCTATCCATGATGACTCCTCTCGCGTTGTTTACAATCAAAACGC
EX764068       <-- CGCTTGCCTATCCATGATGGCACCTCTCGCGTTGTTTACAATCAAAACGC
EY946941       <-- CGCTTGCCTATCCATGATGGCTCCTCTCGCGTTGTTTACAATCAAAACGC
FY429470       <-- .........................cttGCGTTGTTTACAATCAAAACGC
FY438557       <-- ....................................TACAATCAAAACGC
FY454101       <-- ................................................GC
FY454659       <-- ..................................................
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> CGCTTGCCTATCCATGATGGCTCCTCTCGCGTTGTTTACAATCAAAACGC
EY937281       --> ..................................................
EW727874       --> CGCTTGCCTATCCATGATGACTCCTCTCGCGTTGTTTACAATCAAAACGC
FY429691       --> CGCTTGCCTATCCATGATGGCTCCTCTTGCGTTGTTTACAATCAAAACGC
EX768062       --> CGCTTGCCTATCCATGATGGCACCTCTCGCGTTGTTTACAATCAAAACGC
EX901212       --> CGCTTGCCTATCCATGATGGCTCCTCTCGCGTTGTTTACAATCAAAACGC
FY431827       --> CGCTTGCCTATCCATGATGGCTCCTCTTGCGTTGTTTACAATCAAAACGC

               501    -    551
UN17509        --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EY941779       <-- ..................................................
EW723638       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EX764068       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EY946941       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY429470       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY438557       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY454101       <-- CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY454659       <-- ................TATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY449136       <-- ..................................................
FY451188       <-- ..................................................
FY447733       <-- ..................................................
FY446295       <-- ..................................................
FY449958       <-- ..................................................
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EY937281       --> ..................................................
EW727874       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY429691       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EX768062       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
EX901212       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC
FY431827       --> CTTTCTTCATTTTCCCTATCAACTCTCTGTTGAACATCCCTCTTGTCTTC

               551    -    601
UN17509        --> TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- TCCGTAAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY941779       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW723638       <-- TCCGTAAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv Early Scarlet Globe
EX764068       <-- TCCGTGAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946941       <-- TCCGTAAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv Rat-Tail Radish #3870
FY429470       <-- TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY438557       <-- TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY454101       <-- TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY454659       <-- TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY449136       <-- .CCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY451188       <-- .CCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY447733       <-- ....TGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
FY446295       <-- ..................................................  Raphanus sativus cv GSK3-1
FY449958       <-- ..................................................  Raphanus sativus cv GSK3-1
HS106994       <-- ..................................................  Raphanus sativus var. niger
FY448679       <-- ..................................................  Raphanus sativus cv GSK3-1
FY436751       <-- ..................................................  Raphanus sativus cv GSK3-1
FD581951       --> TCCGTAAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY937281       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727874       --> TCCGTAAGAGGGGTGTTGACGACta.........................  Raphanus sativus cv Early Scarlet Globe
FY429691       --> TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1
EX768062       --> TCCGTGAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901212       --> TCCGTAAGAGGGGTGTTGACGACTACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv Early Scarlet Globe
FY431827       --> TCCGTGAGAGGGGTGTTGACGACCACAACGTCGCATTTAGGGAGCATCTC  Raphanus sativus cv GSK3-1

               601    -    651
UN17509        --> ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ACCAAGACTCTCAACATACTTAGCGCCAGTTTCTTTCTCCATCTCGGGTC
EY941779       <-- ..................................................
EW723638       <-- ACCAAGACTCTC......................................
EX764068       <-- ACCAAGACTCTCAACc..................................
EY946941       <-- ACCAAGACTCTCAACATACTTAGCGCCAGTTTCTTTCTCCATCTCGGGTC
FY429470       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY438557       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY454101       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY454659       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY449136       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY451188       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY447733       <-- ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY446295       <-- ..CAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
FY449958       <-- .....................TGCGCCAGTTTCCTTCTCCATCTCGGGTC
HS106994       <-- ..................................................
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> ACCAAGACTCTCAACATACTTAGCGCCAGTTTCTTTCTCCATCTCGGGTC
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC
EX768062       --> ACCAAGACTCTCAACc..................................
EX901212       --> ACCAAGACTCTCAACATACTTAGCACCAGTTTCTTTCTCCATCTCGGGTC
FY431827       --> ACCAAGACTCTCAACATACTTTGCGCCAGTTTCCTTCTCCATCTCGGGTC

               651    -    701
UN17509        --> CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- CCATCTGGAGCCTGTCc.................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY429470       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY438557       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY454101       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY454659       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY449136       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY451188       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY447733       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY446295       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY449958       <-- CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
HS106994       <-- ..........CCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY448679       <-- ..................................................
FY436751       <-- ..................................................
FD581951       --> CCATCTGGAGCCTGTCc.................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
EX768062       --> ..................................................
EX901212       --> CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC
FY431827       --> CCATCTGGAGCCTGTCGTGGTACAACAAGTTGCACCCGAACGGCTTCAGC

               701    -    751
UN17509        --> CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCT.................
FY429470       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY438557       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY454101       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY454659       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY449136       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY451188       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY447733       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY446295       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY449958       <-- CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
HS106994       <-- CTCTGTAGCAACAGCTTTCCGATCCTACCAGCTCCCACTGTTCCTACCGT
FY448679       <-- ............................CAGCTCCCACTGTTCCCACCGT
FY436751       <-- ..................................................
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
EX768062       --> ..................................................
EX901212       --> CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT
FY431827       --> CTCTGCAGCAACAGCTTCCCGATCCTACCAGCTCCCACTGTTCCCACCGT

               751    -    801
UN17509        --> CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY438557       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY454101       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY454659       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY449136       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY451188       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY447733       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY446295       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY449958       <-- CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
HS106994       <-- CTTGCCTTCCAGATCGTACGCTCTGTAAGCGATGCCGGCGACGTTCCACT
FY448679       <-- CTTGCCT-CCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
FY436751       <-- ..................................................
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT
EX768062       --> ..................................................
EX901212       --> CTTGCCTTCCAGATCGTACGCTCTGTAagcgat.................
FY431827       --> CTTGCCTTCCAGATCGTACGCTCGGTAGGCAATGCCAGCGACGTTCCACT

               801    -    851
UN17509        --> CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY438557       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY454101       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY454659       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY449136       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY451188       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY447733       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY446295       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY449958       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
HS106994       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY448679       <-- CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC
FY436751       <-- ..................................................
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> CCCCGTTGACGACTTGGTTGTACCCC........................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> CCCCGTTGACGACTTGGTTGTACCCCGGCACGAAGTTGCGCATGAGGATC

               851    -    901
UN17509        --> AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY438557       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY454101       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY454659       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY449136       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY451188       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY447733       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY446295       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY449958       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
HS106994       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY448679       <-- AGGATCCTCATGAGCTCGTCTTCCGCCACGGAGACAACGTTGCTTCCCGT
FY436751       <-- .....................TCCGCCA-GGAGACAACGT-GCTTCCCGT
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> AGGATCCTCATGAGCTCGTCTTCCGCCA......................

               901    -    951
UN17509        --> GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY438557       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY454101       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY454659       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY449136       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY451188       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY447733       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY446295       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY449958       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
HS106994       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY448679       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FY436751       <-- GACTTCAGCCACCGTCAGACCAGCAGCTGCAGCAGCCTGCAGATCGATGT
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               951    -   1001
UN17509        --> GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY438557       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY454101       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY454659       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY449136       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY451188       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY447733       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY446295       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY449958       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
HS106994       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY448679       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FY436751       <-- GGTCGGATCCGATACCGGCTGTGAGGAGAAGCTGAAGGTTCTTGGCCTTC
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1001   -   1051
UN17509        --> TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY438557       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY454101       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY454659       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY449136       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY451188       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY447733       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY446295       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY449958       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
HS106994       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY448679       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FY436751       <-- TTGATTCTTTCGGCAGTGACGTAAGCCGGGTGGAAGGGGGTGGATATTAG
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1051   -   1101
UN17509        --> GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY438557       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY454101       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY454659       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY449136       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY451188       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY447733       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY446295       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY449958       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
HS106994       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY448679       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FY436751       <-- GACGTGAAGGTCAGGGATATGCTTCTCCAGTTCGCAGTCTGGACCTTCTT
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1101   -   1151
UN17509        --> TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY438557       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY454101       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY454659       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY449136       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY451188       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY447733       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY446295       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY449958       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
HS106994       <-- TGTCGTCGGTGACGATGTAGTGGTGTCCTTGTGACTCTAGCCAGCTGCGG
FY448679       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FY436751       <-- TGTCGTCAGTGACAATGTAGTGGTGTCCCTGTGACTCTAGCCAGCTGCGG
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1151   -   1201
UN17509        --> ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY438557       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY454101       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY454659       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY449136       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY451188       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY447733       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY446295       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY449958       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
HS106994       <-- ATTCCTAGCGCATTCTCAACGCAGCCAAGGAAGTTAGGATTCTTTGTAGC
FY448679       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FY436751       <-- ATTCCTAAAGCATTCTCGACGCAGCCAAGAAAGTTAGGATTCTTTGTAGC
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1201   -   1251
UN17509        --> GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY438557       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY454101       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY454659       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY449136       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY451188       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY447733       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY446295       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY449958       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
HS106994       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY448679       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FY436751       <-- GTATTCGTTGGCTTTGTAGAAAACTCCAACGATCTTTTTGCTATCACCAG
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1251   -   1301
UN17509        --> AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY438557       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY454101       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY454659       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY449136       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY451188       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY447733       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY446295       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY449958       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
HS106994       <-- AAGAAGCATGCAAATGGCGAGACAAGAAACCTGAAGAATTAGAGGAAACG
FY448679       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FY436751       <-- AAGAAGCATGTAAATGACGTGATAAGAAGCCTGAAGAATTAGAGGAAACG
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1301   -   1351
UN17509        --> CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGT-CAA
FY438557       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY454101       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY454659       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY449136       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY451188       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY447733       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGT-CAA
FY446295       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY449958       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
HS106994       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY448679       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FY436751       <-- CACGCTCTTATAGCTGCTCGCATCGCCATTACCTCAGATCTAGAGTTCAA
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1351   -   1401
UN17509        --> AGGAGATTCTCTACTTCCTGTCGATATATATATATATATTTTTTTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD577685       <-- ..................................................
EY941779       <-- ..................................................
EW723638       <-- ..................................................
EX764068       <-- ..................................................
EY946941       <-- ..................................................
FY429470       <-- AGGA..............................................
FY438557       <-- AGGAG.............................................
FY454101       <-- AGGAGATTCTCTACTcctccg.............................
FY454659       <-- AGGAG.............................................
FY449136       <-- AGGAG.............................................
FY451188       <-- AGGAG.............................................
FY447733       <-- AGG...............................................
FY446295       <-- AGGAGAT-CTCTA-TTCCTTCCGATA........................
FY449958       <-- AGGAGATTCTCTACTTCCTTCCGATAAATAT...................
HS106994       <-- AGGATATTCGCTACTTCCTGTCGATATATATATATATATTTTTTTTCCTC
FY448679       <-- AGGAG-TTCTCTA.....................................
FY436751       <-- AGGAGATTCTC.......................................
FD581951       --> ..................................................
EY937281       --> ..................................................
EW727874       --> ..................................................
FY429691       --> ..................................................
EX768062       --> ..................................................
EX901212       --> ..................................................
FY431827       --> ..................................................

               1401   -   1451
UN17509        --> GTGC
                   ~~~~
FD577685       <-- ....
EY941779       <-- ....
EW723638       <-- ....
EX764068       <-- ....
EY946941       <-- ....
FY429470       <-- ....
FY438557       <-- ....
FY454101       <-- ....
FY454659       <-- ....
FY449136       <-- ....
FY451188       <-- ....
FY447733       <-- ....
FY446295       <-- ....
FY449958       <-- ....
HS106994       <-- GTGC
FY448679       <-- ....
FY436751       <-- ....
FD581951       --> ....
EY937281       --> ....
EW727874       --> ....
FY429691       --> ....
EX768062       --> ....
EX901212       --> ....
FY431827       --> ....