Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17524

               -11    -     39
UN17524        --> ............TTTTTGACTCTCTCTCGCTCTCTCTCTACAGATCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- ..................................................
FD937055       <-- ..................................................
FD976136       <-- ..................................................
EX909779       <-- ..................................................
EX768478       <-- ..................................................
FD960656       <-- ..................................................
FD536766       <-- ..................................................
FD985955       <-- ..................................................
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> ............TTTTTGACTCTCTCTCTCTCTCTCTCTACAGATCTCTT
FD541488       --> ............TTTTTGACTCTCTCTCTCTCTCTCTCTACAGATCTCTT
EY947022       --> tttttgactctctctctctCTCTCTCTCGCTCTCTCTCTACAGATCTCTT
FD941410       --> tttttgactctctctctctCTCTCTCTCGCTCTCTCTCTACAGATCTCTT
FD964733       --> ..tttttgactctctctctCTCTCTCTCGCTCTCTCTCTACAGATCTCTT
FY444980       --> ...............................CTCTCTCTA-AGATCTCTT
EX770783       --> ..................................................

               39     -     89
UN17524        --> CCTCTCTCTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- ..................................................
FD937055       <-- ..................................................
FD976136       <-- ..................................................
EX909779       <-- ..................................................
EX768478       <-- ..................................................
FD960656       <-- ..................................................
FD536766       <-- ..................................................
FD985955       <-- ..................................................
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> CCTCTCGGTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTGT
FD541488       --> CCTCTCGGTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTGT
EY947022       --> CCTCTCTCTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTG-
FD941410       --> CCTCTCTCTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTG-
FD964733       --> CCTCTCTCTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTG-
FY444980       --> CCTCTCTCTCACTTCAAGATCGCCACAACTCTAACCC-GTTTCCAAGTG-
EX770783       --> ..cCTCTCTCACTTCAAGATCGCCACAACTCTAACCCCGTTTCCAAGTG-

               89     -    139
UN17524        --> GAGATCGTTAGAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- .....................................cAAAAAA-TGGGG
FD937055       <-- ..................................................
FD976136       <-- ..................................................
EX909779       <-- ..................................................
EX768478       <-- ..................................................
FD960656       <-- ..................................................
FD536766       <-- ..................................................
FD985955       <-- ..................................................
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> GGGATCGTTAGAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
FD541488       --> GGGATCGTTAGAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
EY947022       --> GAGATCGTTAGAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
FD941410       --> GAGATCGTTAAAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
FD964733       --> GAGATCGTTAGAGAGATTGTGTAACAACATCGGAGTCAAAAAAAATGGGG
FY444980       --> GAGATCGTTAGAGAGATTGTGTAACAACATCAGAGTCAAAAAAA-TGGGG
EX770783       --> GGGATCGTTAGAGAGATT-TGT-GTAACATCAGAGTCAAAAAAA-TGGGG

               139    -    189
UN17524        --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- AAGAAGGAGAGACATAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FD937055       <-- .........AGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FD976136       <-- ............................................TATACC
EX909779       <-- ..................................................
EX768478       <-- ..................................................
FD960656       <-- ..................................................
FD536766       <-- ..................................................
FD985955       <-- ..................................................
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FD541488       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
EY947022       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FD941410       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FD964733       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
FY444980       --> AAGAAGGAGAGACCAAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC
EX770783       --> AAGAAGGAGAGACATAGACCAGAGAAGTTGTCTGTTTACCTTTATATACC

               189    -    239
UN17524        --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD937055       <-- TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD976136       <-- TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
EX909779       <-- ....ATTGTTGG-TACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
EX768478       <-- .......GTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD960656       <-- ..............................................GCTG
FD536766       <-- ..................................................
FD985955       <-- ..................................................
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD541488       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
EY947022       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD941410       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FD964733       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
FY444980       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG
EX770783       --> TAACATTGTTGGGTACATGAGAGTTCTCTTGAACTGTGTTGCCTTTGCTG

               239    -    289
UN17524        --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD937055       <-- TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD976136       <-- TCTGTTTCTCTAACAAACCACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
EX909779       <-- TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
EX768478       <-- TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD960656       <-- TCTGTTTCTCTAACAAAACGCTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD536766       <-- .................................TCTATTTCTTCAGCTTT
FD985955       <-- .................................TCTATTTCTTCAGCTTT
EX891067       <-- ....................................ATTTCTTCAGCTTT
EX769378       <-- ..............................................gcTT
FD950878       <-- ..................................................
FD540223       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD541488       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
EY947022       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD941410       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FD964733       --> TCTGTTTCTCTAACAAAACGCTTTTCTCCCTCCTCTATTTCTTCAGCTTT
FY444980       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT
EX770783       --> TCTGTTTCTCTAACAAAACACTTTTCTCCCTCCTCTATTTCTTCAGCTTT

               289    -    339
UN17524        --> TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. landra
FD937055       <-- TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus var. oleiformis
FD976136       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909779       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX768478       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960656       <-- TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. maritimus
FD536766       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985955       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. landra
EX891067       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus var. oleiformis
EX769378       <-- TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540223       --> TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541488       --> TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947022       --> TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD941410       --> TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus var. oleiformis
FD964733       --> TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. maritimus
FY444980       --> TGTTGTGATGCTGTGGATGGCTGGTGCGCTCGTAGATTCAACCAAGTTTC  Raphanus sativus cv GSK3-1
EX770783       --> TGTTGTGATGCTGTGGATGGCTGGTGTGCTCGTAGATTCAACCAAGTTTC  Raphanus raphanistrum subsp. landra

               339    -    389
UN17524        --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus raphanistrum subsp. landra
FD937055       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus sativus var. oleiformis
FD976136       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909779       <-- AACGTTTGGAGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX768478       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960656       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus raphanistrum subsp. maritimus
FD536766       <-- TACGTTTGGGGCTGTTCTCGATATGGTCACAGATAGAGTTAGCACGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985955       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus raphanistrum subsp. landra
EX891067       <-- AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus sativus var. oleiformis
EX769378       <-- AACGTTTGGAGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540223       --> TACGTTTGGGGCTGTTCTCGATATGGTCACAGATAGAGTTAGCACGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541488       --> TACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947022       --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD941410       --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus sativus var. oleiformis
FD964733       --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus raphanistrum subsp. maritimus
FY444980       --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus sativus cv GSK3-1
EX770783       --> AACGTTTGGGGCTGTTCTCGACATGGTCACAGATAGAGTTAGCACGGCAT  Raphanus raphanistrum subsp. landra

               389    -    439
UN17524        --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD937055       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTC
FD976136       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
EX909779       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
EX768478       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD960656       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD536766       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD985955       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
EX891067       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
EX769378       <-- GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD950878       <-- ..................................................
FD540223       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FD541488       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTTGTCTTCCTT
EY947022       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTC
FD941410       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTC
FD964733       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT
FY444980       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTC
EX770783       --> GTCTACTCGTGATTCTCTCTCAAGTCTACAGGCCTAGCTTGGTCTTCCTT

               439    -    489
UN17524        --> TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD937055       <-- TCTTTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD976136       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCGGATGTACAGTAC
EX909779       <-- TCATTGCTGGCTTTAGATATTGCTAGTCACTGGCTGCAGATGTACAGTAC
EX768478       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD960656       <-- TCATTGTTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD536766       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD985955       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
EX891067       <-- TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
EX769378       <-- TCATTGCTGGCTTTAGATATTGCTAGTCACTGGCTGCAGATGTACAGTAC
FD950878       <-- ..................................................
FD540223       --> TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD541488       --> TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
EY947022       --> TCTTTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD941410       --> TCTTTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FD964733       --> TCATTGTTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
FY444980       --> TCTTTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC
EX770783       --> TCATTGCTGGCTTTAGATATTGCTAGTCATTGGCTGCAGATGTACAGTAC

               489    -    539
UN17524        --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD937055       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD976136       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
EX909779       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
EX768478       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD960656       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD536766       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACGGCACAAGC
FD985955       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATATGAAA-GACAGCACAAGC
EX891067       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
EX769378       <-- GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAAAGACAGCACAAGC
FD950878       <-- ..................................................
FD540223       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACGGCACAAGC
FD541488       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
EY947022       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD941410       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FD964733       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
FY444980       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC
EX770783       --> GTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAAA-GACAGCACAAGC

               539    -    589
UN17524        --> TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGCTATTGCTG  Raphanus raphanistrum subsp. landra
FD937055       <-- TGGCTTTTCAGACTTTACTATGGCAACCGGATCTTCATGTGTTATTGCTG  Raphanus sativus var. oleiformis
FD976136       <-- TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTCATGTGCTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909779       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX768478       <-- TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTCATGTGCTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960656       <-- TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTTATGTGCTATTGCTG  Raphanus raphanistrum subsp. maritimus
FD536766       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985955       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGCTATTGCTG  Raphanus raphanistrum subsp. landra
EX891067       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGCTATTGCTG  Raphanus sativus var. oleiformis
EX769378       <-- TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540223       --> TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541488       --> TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGTTATTGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947022       --> TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTCATGTGTTATTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD941410       --> TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTCATGTGTTATTGCTG  Raphanus sativus var. oleiformis
FD964733       --> TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTTATGTGCTATTGCTG  Raphanus raphanistrum subsp. maritimus
FY444980       --> TGGCTTTTCAGACTCTACTATGGCAACCGGATCTTCATGTGTTATTGCTG  Raphanus sativus cv GSK3-1
EX770783       --> TGGCTTTTCAGACTCTACTATGGAAACCGGATCTTCATGTGCTATTGCTG  Raphanus raphanistrum subsp. landra

               589    -    639
UN17524        --> TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TGTTTCCTGCGAGGTTCTTTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. landra
FD937055       <-- TGTTTCCTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus sativus var. oleiformis
FD976136       <-- TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909779       <-- TGTTTCTTGCGAGGTTCTATATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus sativus cv Rat-Tail Radish #3870
EX768478       <-- TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960656       <-- TGTTTCTTGCGAGGTTCTTTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. maritimus
FD536766       <-- TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985955       <-- TGTTTCCTGCGAGGTTCTTTATATCATCCTTCTTCTCATCGCAAAGAACC  Raphanus raphanistrum subsp. landra
EX891067       <-- TGTTTCTTGCGAGGTTCTATATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus sativus var. oleiformis
EX769378       <-- TGTTTCTTGCGAGGTTCTATATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540223       --> TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541488       --> TGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGA-CC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947022       --> TGTTTCct..........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941410       --> TGTTTCCTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus sativus var. oleiformis
FD964733       --> TGTTTCTTGCGAGGTTCTTTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. maritimus
FY444980       --> TGTTTCCTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus sativus cv GSK3-1
EX770783       --> TGTTTCCTGCGAGGTTCTTTATATCATCCTTCTTCTCATTGCAAAGAACC  Raphanus raphanistrum subsp. landra

               639    -    689
UN17524        --> AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
FD937055       <-- AAACCGAAAGTCTCCTGAATGTCGTACTTTCCACATTAACTCAGATTTCA
FD976136       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
EX909779       <-- AAACCGAAAGTCTCCTGAATGTCGTACTTTCCACATTAACTCAGATTTCA
EX768478       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCT
FD960656       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACGTTAACTCGGATTTCA
FD536766       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
FD985955       <-- AAACCGAAAGTCCCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
EX891067       <-- AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
EX769378       <-- AAACCGAAAGTCTCCTGAATGTCGTACTTTCCACATTAACTCAGATTTCA
FD950878       <-- ........................tacTTTCCACATTAACTCAGATTTCA
FD540223       --> AAACCGAAAGTCTC-TGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
FD541488       --> AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA
EY947022       --> ..................................................
FD941410       --> AAACCGAAAGTCTCCTGAATGTCGTACTTTCCACATTAA...........
FD964733       --> AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACGTTAACTCGGATTTCA
FY444980       --> AAACCGAAAGTCTCCTGAATGTCGTACTTTCCACATTAACTCAGATTTCA
EX770783       --> AAACCGAAAGTCTCCTGAATGTCGTAGTTTCCACATTAACTCAGATTTCA

               689    -    739
UN17524        --> CCACTTTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- CCACTTTCTCTTCTCCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. landra
FD937055       <-- CCACTTTCTtt.......................................  Raphanus sativus var. oleiformis
FD976136       <-- CCACTCTCTCTTCTTCTAGCTCTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909779       <-- CCACTTTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EX768478       <-- CCACTCTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960656       <-- CCACTCTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. maritimus
FD536766       <-- CCACTCTCTCTTCTTCTAGCTTTGTCAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985955       <-- CCACTTTCTCTTCTCCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. landra
EX891067       <-- CCACTTTCTCTTCTTCTCGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus sativus var. oleiformis
EX769378       <-- CCACTTTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950878       <-- CCACTTTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD540223       --> C-ACTCTCTCTTCT-CTAGCTT-GTC-ATATTCGGT-GGTCGATGAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541488       --> CCACTCTCTCTTCT....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY947022       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941410       --> ..................................................  Raphanus sativus var. oleiformis
FD964733       --> CCACTCTCTCTTCTTCTAGCTTTGAC........................  Raphanus raphanistrum subsp. maritimus
FY444980       --> CCACTTTCTCTTCTTCTAGCTTTGACAATATTCGGTTGGTCGATGAAACA  Raphanus sativus cv GSK3-1
EX770783       --> CCACTTTCTCTTCTCCTAGCTTTGACAATATTCGGT-GGTCGATGAAACA  Raphanus raphanistrum subsp. landra

               739    -    789
UN17524        --> AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD937055       <-- ..................................................
FD976136       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
EX909779       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
EX768478       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD960656       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD536766       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD985955       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
EX891067       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
EX769378       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD950878       <-- AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
FD540223       --> A-CAGTCA-TATCAT-CAGATG............................
FD541488       --> ..................................................
EY947022       --> ..................................................
FD941410       --> ..................................................
FD964733       --> ..................................................
FY444980       --> AACAGTCAATATCATTCAGATGAAAACAGCTGCAGATGTCTGTGTACTGT
EX770783       --> A-CAGTCA-TATCATTCAGATGAAA-CAGCTGCAGATGTCTGTGTACTGT

               789    -    839
UN17524        --> ATGATATAGAGAAGCAGCAGAAGAATACTTGATCTTCCTTCCTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- ATGATATAGAGAAGCAGCAGAAGAATACTTGATCTTCCTTCTTTTTTTTT
FD937055       <-- ..................................................
FD976136       <-- ATGATATAGAGAAGCAGCAGAAGAATACTTGATCTTCCTTCCCTTTTTTT
EX909779       <-- ATGATATAGAGAAGCAGCAGAAGAATCTTTGATCTTCCTTCCCTTTTTTT
EX768478       <-- ATGATATAGAGAAGCAGCAGAAGAATACT.....................
FD960656       <-- ATGATATAGAGAAGCAGCAGAAAAATCCTTAATCTTCCTTCCTTTTTTTT
FD536766       <-- ATGATATAGAGAAGCAGCAGAAGAATCCTTGATCTTCCTTC-TCTTTTTT
FD985955       <-- ATGATATAGAGAAGCAGCAGAAGAATACTTGATCTTCCT-CCTTTTTTTT
EX891067       <-- ATGATATAG.........................................
EX769378       <-- ATGATATAG.........................................
FD950878       <-- ATGATATAGAGAAGCAGCAGAAGAATCTTTGATCTTCCTTCCCTTTTTTT
FD540223       --> ..................................................
FD541488       --> ..................................................
EY947022       --> ..................................................
FD941410       --> ..................................................
FD964733       --> ..................................................
FY444980       --> ATGATATAGAGAAGCAGCAGAAGAATCTTTGATCTTCCTTCCCTTTTTTT
EX770783       --> ATGATATAGAGAgca...................................

               839    -    889
UN17524        --> TCTGAACTTGCAACTCTATTTATC-TTTTCTTTTTCTTGTGTAGAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- TCTGAACTTGCAACTCTATTTATC-TTTTTTTTTTCCTGTGTAGAAACAT
FD937055       <-- ..................................................
FD976136       <-- -CTGAACTTGCAACTCTGTTTATC-TTTTCTTTTTCTTGTGTAGAAACAT
EX909779       <-- -CTGAACTTGCAACTCTATTTATCCTTTTCT-CTTCTTGTGTAGAAACAT
EX768478       <-- ..................................................
FD960656       <-- -CTGAACTTGCAACTCTATTTATC-TTTTTTTTTAATTGTGTAGAAACAT
FD536766       <-- TCTGAACTTGCAACTCTATTTATT-TTTTCTTTT-CTTGTGTAGAAACAT
FD985955       <-- TCTGAACTTGCAACTCTATTTATC-TTTT-TTTTTCTTGTGTAGAAACAT
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- T-TGAACTTGCAACTCTATTTATC-CTTT.....................
FD540223       --> ..................................................
FD541488       --> ..................................................
EY947022       --> ..................................................
FD941410       --> ..................................................
FD964733       --> ..................................................
FY444980       --> -CTGAACTTGCAACTCTATTTATCCTTTTCTTTT-CTTGTGTAGAAACAT
EX770783       --> ..................................................

               889    -    939
UN17524        --> GTTCCTATGTTATAAA-CAAGATGAAAGAATATTGATTTACCTTTTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- GTTCCTATGTCATAAA-CAAGATGAAAGAATATTGATTTACCTTTTTGgc
FD937055       <-- ..................................................
FD976136       <-- GTTCCTATGTTATAAA-CAAGATGAAAGAATATTGATTTACCTTTTTGAC
EX909779       <-- GTTCCTATGTTATAAAACAAGATGAAAGAATATTGATTTACCTTTTTGAC
EX768478       <-- ..................................................
FD960656       <-- GTTCCTATGTTATAAA-CAAGATGAAAGAATATTGATTTACCT.......
FD536766       <-- GTTCCTATGTTATAAAACAAGATGAAAGAATATTGATTTACCTTTTTGAC
FD985955       <-- GTTCCTATGTTATAAA-CAAGATGAAAGAATATTGATTTACCTTTTTGAC
EX891067       <-- ..................................................
EX769378       <-- ..................................................
FD950878       <-- ..................................................
FD540223       --> ..................................................
FD541488       --> ..................................................
EY947022       --> ..................................................
FD941410       --> ..................................................
FD964733       --> ..................................................
FY444980       --> GTTCCTATGTTATAAA..................................
EX770783       --> ..................................................

               939    -    989
UN17524        --> ATAATTTCTGTTTGTAAATATAATCTGATTACAAGTTTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774930       <-- ..........................................
FD937055       <-- ..........................................
FD976136       <-- AT........................................
EX909779       <-- ATAATTTCTGTTTGTAAATATAATCTGATTACAAGTTTT...
EX768478       <-- ..........................................
FD960656       <-- ..........................................
FD536766       <-- ..........................................
FD985955       <-- ATAATTTCTGTTTGTAAATATAATCTGATTACAAGTTTTACG
EX891067       <-- ..........................................
EX769378       <-- ..........................................
FD950878       <-- ..........................................
FD540223       --> ..........................................
FD541488       --> ..........................................
EY947022       --> ..........................................
FD941410       --> ..........................................
FD964733       --> ..........................................
FY444980       --> ..........................................
EX770783       --> ..........................................