1      -     51
UN17530        --> GGGAGCGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- ....GCGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
EY944676       <-- ....ggGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAAAGA
FD959669       <-- .......gGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
EX899367       <-- .........................GAAGGGTTGAGACTTGAGCGAGAGA
FD967987       <-- ................................gGAGAGTAGAGCGAGAGA
FD967716       <-- ......................................TAGAGCGAGAGA
FD960760       <-- ..................................................
EV540546       <-- ..................................................
FY440079       <-- ..................................................
FY443516       <-- ..................................................
FD537085       <-- ..................................................
EY928181       <-- ..................................................
EV543326       <-- ..................................................
EY894184       <-- ..................................................
FD550972       --> GGGAGCGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
EY949096       --> ....ggGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAAAGA
FD540629       --> .....gGAGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
EY898010       --> ......ggGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
FD963325       --> ......ggGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
FD964868       --> ......ggGAACCAATCGGTTCTTGGAAGGGTTGAGACTAGAGCGAGAGA
EX895156       --> .......................gGGAAGGGTTGAGACTTGAGCGAGAGA
FD939350       --> .........................ggAGGGTTGAGACTTGAGCGAGAGA
EV539294       --> ...............................ggGAGAGTAGAGCGAGAGA
FD971644       --> ...............................ggGAGACTAGAGCGAGAGA
FD972001       --> ...............................ggGAGAGTAGAGCGAGAGA
EV536006       --> .....................................ggAGAGCGAGAGA
EV539572       --> .....................................ggAGAGCGAGAGA
EW716202       --> ......................................ggGAGCGAGAGA
EY932457       --> ......................................ggGAGCGAGAGA
FD560612       --> ......................................ttGAGCGAGAGA
FD972396       --> ..................................................
EV549495       --> ..................................................

               51     -    101
UN17530        --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EY944676       <-- TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD959669       <-- TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EX899367       <-- TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD967987       <-- TGAGCAGCTTCGCAATTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD967716       <-- TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD960760       <-- .............................TCGTCCTCTCTCTCCAATGCC
EV540546       <-- ......................................CTCTCCAATGCC
FY440079       <-- ........................................CTCCAATGCC
FY443516       <-- ........................................CTCCAATGCC
FD537085       <-- ..................................................
EY928181       <-- ..................................................
EV543326       <-- ..................................................
EY894184       <-- ..................................................
FD550972       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EY949096       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD540629       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EY898010       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD963325       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD964868       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EX895156       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD939350       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EV539294       --> TGAGCAGCTTCGCAATTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD971644       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD972001       --> TGAGCAGCTTCGCAATTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EV536006       --> TTAGCAGCTTCGCAATTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EV539572       --> TGAGCAGCTTCGCAATTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EW716202       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
EY932457       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD560612       --> TGAGCAGCTTCGCGGTTCCACTTTCTTCCTCGTCCTCTCTCTCCAATGCC
FD972396       --> ..................................................
EV549495       --> ..................................................

               101    -    151
UN17530        --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. maritimus
EX899367       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. maritimus
EV540546       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv GSK3-1
FY443516       <-- TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv GSK3-1
FD537085       <-- ..............TCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- .................TGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus var. oleiformis
EV543326       <-- .........................TCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD550972       --> TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. maritimus
FD963325       --> TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. maritimus
FD964868       --> TATCATCAACCTTCTCGTGTTCGCTTTGATTTCCACAATCCTCGTTCCAT  Raphanus raphanistrum subsp. maritimus
EX895156       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD939350       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus var. oleiformis
EV539294       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus var. oleiformis
EY932457       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus var. oleiformis
FD560612       --> TATCATCAACCTTCTCGTGTTCGCTTCGATTTCCGCAATCCTCGTTCCAT  Raphanus sativus var. oleiformis
FD972396       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN17530        --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY944676       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD959669       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EX899367       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD967987       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACGTCTT
FD967716       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD960760       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EV540546       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FY440079       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FY443516       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD537085       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY928181       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EV543326       <-- GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY894184       <-- ..................................................
FD550972       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY949096       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD540629       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY898010       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD963325       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD964868       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EX895156       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD939350       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EV539294       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD971644       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD972001       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACGTCTT
EV536006       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EV539572       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EW716202       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
EY932457       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD560612       --> GTTTGAGATTCGCGGGATACGACTAAGTGGGAGGGTTCGAAGAACATCTT
FD972396       --> ..................................................
EV549495       --> ..................................................

               201    -    251
UN17530        --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- TAAAGTGCAATTGCTGCAGCAATGGGAGCGGAGGTGAAAACGAAACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
EX899367       <-- TAAAGTGCAATTTCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
EV540546       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv GSK3-1
FY443516       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv GSK3-1
FD537085       <-- TAA-GTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAATGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus var. oleiformis
EV543326       <-- TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- ..................GCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
FD550972       --> TAAAGTGCAATTGCTGCAGCAATGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> TAA-GTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAATGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> TAAAGTGCAATTGCTGCAGCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
FD963325       --> TAAAGTGCAATTGCTGCAGCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
FD964868       --> TAAAGTGCAATTGCTGCAGCAAAGGGAGCGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. maritimus
EX895156       --> TAAAGTGCAATTTCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus cv Early Scarlet Globe
FD939350       --> TAAAGTGCAGTTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus sativus var. oleiformis
EV539294       --> TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> TAAAGTGCAATTGCTGCAGCAAAGGGAATGGAGGTGAAAACGAAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus var. oleiformis
EY932457       --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus var. oleiformis
FD560612       --> TAAAGTGCAATTGCTGCAGCAAAGGGAACGGAGGTGAAAACGAAAACAGA  Raphanus sativus var. oleiformis
FD972396       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN17530        --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGCCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. maritimus
EX899367       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. maritimus
EV540546       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus sativus cv GSK3-1
FY443516       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus sativus cv GSK3-1
FD537085       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus var. oleiformis
EV543326       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGTTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. maritimus
FD550972       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. maritimus
FD963325       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. maritimus
FD964868       --> AATGTGT-AGATGCTTTCTTTCTGGGAAAGG-ACTAGCTGAGGT-ATCAA  Raphanus raphanistrum subsp. maritimus
EX895156       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus cv Early Scarlet Globe
FD939350       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus var. oleiformis
EV539294       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCGCTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGTTTATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus var. oleiformis
EY932457       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus var. oleiformis
FD560612       --> AATGTGTTAGATGCTTTCTTTCTGGGAAAGGCACTAGCTGAGGTTATGAA  Raphanus sativus var. oleiformis
FD972396       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN17530        --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EY944676       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD959669       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EX899367       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD967987       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD967716       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD960760       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EV540546       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FY440079       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FY443516       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD537085       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EY928181       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EV543326       <-- CGAGCGAATTGAGTCCGCAGTTGGGGAAGTTTTGGGTAATATTGGAAGGT
EY894184       <-- CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD550972       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EY949096       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD540629       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EY898010       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD963325       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD964868       --> CGAG..............................................
EX895156       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD939350       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EV539294       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTGATATTGGAAGGT
FD971644       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD972001       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EV536006       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EV539572       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EW716202       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
EY932457       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD560612       --> CGAGCGAATTGAGTCCGCAGTTGGCGAAGTTTTGGGTAATATTGGAAGGT
FD972396       --> ..................................................
EV549495       --> ..................................................

               351    -    401
UN17530        --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. maritimus
EX899367       <-- TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. maritimus
EV540546       <-- TTCAAGCTGAGCAACAGAAGCGAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv GSK3-1
FY443516       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv GSK3-1
FD537085       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTG  Raphanus sativus var. oleiformis
EV543326       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. maritimus
FD550972       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. maritimus
FD963325       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus cv Early Scarlet Globe
FD939350       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus var. oleiformis
EV539294       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> TTCAAGCTGAGCAACAGAAGCGAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> TTCAAGCTGAGCAACAGAAGCAAGTTCAAGAAATTCAGGGAGAGGTGCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus var. oleiformis
EY932457       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTG  Raphanus sativus var. oleiformis
FD560612       --> TTCAGGCTGAGCAACAGAAGCAAGTTCAAGAGATTCAGGGAGAGGTGCTA  Raphanus sativus var. oleiformis
FD972396       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN17530        --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- GAAAGAGCCAAGAAAGCTAAAGAAATAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. maritimus
EX899367       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCTGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- GAAAGAGCCAAGAAAGCTAAAGAAATAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. maritimus
EV540546       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv GSK3-1
FY443516       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv GSK3-1
FD537085       <-- GAAAGAGCCAAGAAAGCTAAAGTTAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus var. oleiformis
EV543326       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. maritimus
FD550972       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> GAAAGAGCCAAGAAAGCTAAAGTTAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. maritimus
FD963325       --> GAAAGAGCCAAGAAAGCTAAAGAAATAGCAGCTAGGGAAACCGTGGAGGC  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus cv Early Scarlet Globe
FD939350       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus var. oleiformis
EV539294       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCTGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGAGAAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus var. oleiformis
EY932457       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus var. oleiformis
FD560612       --> GAAAGAGCCAAGAAAGCTAAAGAAAGAGCAGCTAGGGAAACCGTGGAGGC  Raphanus sativus var. oleiformis
FD972396       --> .....................................gAACCGTGGAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ..............................................gGGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN17530        --> ACAAGGACTCGTACC-AAGTCCACAAACCCAAAACCAGCTGCTGGTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. maritimus
EX899367       <-- ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- ACAAGGAC----TCG-AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- ACAAGGAC----TCG-AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. maritimus
EV540546       <-- ACAAGGAC----TCG-AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- ACAAGGACTCGTACCGGAATCCACAAACCCAAGACCAGCTGCTGGTGTTG  Raphanus sativus cv GSK3-1
FY443516       <-- ACAAGGACTCGTACCGGAATCCACAAACCCAAGACCAGCTGCTGGTGTTG  Raphanus sativus cv GSK3-1
FD537085       <-- ACAAGGAC----TCG-AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- ACAAGGACTCGTGCCGGAATCCACAAACCCAAAACCAGCTGCTGGTGCTG  Raphanus sativus var. oleiformis
EV543326       <-- ACAAGGAC----TCG-AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. maritimus
FD550972       --> ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. maritimus
FD963325       --> ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus cv Early Scarlet Globe
FD939350       --> ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus var. oleiformis
EV539294       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus var. oleiformis
EY932457       --> ACAAGGACTCGTGCCGGAATCCACAAACCCAAAACCAGCTGCTGGTGCTG  Raphanus sativus var. oleiformis
FD560612       --> ACAAGGACTCGTACCGGAATCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus sativus var. oleiformis
FD972396       --> ACAAGGACTCG-----AA-TCCACAAACCCAAAACCAGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> ACAAGGACTCGTACCCGAATCCACAAACCCAAAACCGGCTGCTGGTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN17530        --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGTCTATAAGA  Raphanus raphanistrum subsp. maritimus
EX899367       <-- TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGTCTATAAGA  Raphanus raphanistrum subsp. maritimus
EV540546       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- TTACCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv GSK3-1
FY443516       <-- TTACCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv GSK3-1
FD537085       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus var. oleiformis
EV543326       <-- TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. maritimus
FD550972       --> TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. maritimus
FD963325       --> TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGTCTATAAGA  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus cv Early Scarlet Globe
FD939350       --> TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus var. oleiformis
EV539294       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> TTGCCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus var. oleiformis
EY932457       --> TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus var. oleiformis
FD560612       --> TTGCCTCTGTTGTAAACCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus sativus var. oleiformis
FD972396       --> TTGTCTCTGTTGTAACCCCTACCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> TTGCCTCTGTTGTAACCCCTATCTCGATCGTTGAAAGCAAGGCTATAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN17530        --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. maritimus
EX899367       <-- AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- AATGATGAAAAGCTGCCGGGTTTTTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. maritimus
EV540546       <-- AATTATGAAAAGCTGCCGGGTTTTTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv GSK3-1
FY443516       <-- AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv GSK3-1
FD537085       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- AATGATGAGAAGCTGCCGGGTTTTTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus var. oleiformis
EV543326       <-- AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- AATGATGAAAAGCTGCCGGGTTTTTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. maritimus
FD550972       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> AATGATGAAAAGCT....................................  Raphanus raphanistrum subsp. maritimus
FD963325       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus cv Early Scarlet Globe
FD939350       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus var. oleiformis
EV539294       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> AATTATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus var. oleiformis
EY932457       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus var. oleiformis
FD560612       --> AATGATGAGAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus sativus var. oleiformis
FD972396       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> AATGATGAAAAGCTGCCGGGTTTCTCCGGATCTTCAGAGCCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN17530        --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- GGATAGCTCGAGTTCTAGCGACGAATACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. maritimus
EX899367       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. maritimus
EV540546       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGATTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv GSK3-1
FY443516       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv GSK3-1
FD537085       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- GGATAGCTCGAGTTCTATCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus var. oleiformis
EV543326       <-- GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. maritimus
FD550972       --> GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> GGATAGCTCGAGTTCTAGCGACGAATACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963325       --> GGATAGCTCGAGTTCTAGTGACGAAGAAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus cv Early Scarlet Globe
FD939350       --> GGATAGCTCGAGTTCTATCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus var. oleiformis
EV539294       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCC..  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> GGATAGCTCGAGTTCTATCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus var. oleiformis
EY932457       --> GGATAGCTCGAGTTCTATCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus var. oleiformis
FD560612       --> GGATAGCTCGAGTTCTATCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus sativus var. oleiformis
FD972396       --> GGATAGCTCGAGTTCTAGCGACGAAGACAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> GGATAGCTCGAGTTCTAGTGACGAAGGAAGTGACTAAGGGATTGTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN17530        --> GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGGCTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. maritimus
EX899367       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGGCTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. maritimus
EV540546       <-- GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus cv GSK3-1
FY443516       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus cv GSK3-1
FD537085       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTTTTTGAAACGGTTG  Raphanus sativus var. oleiformis
EV543326       <-- GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. maritimus
FD550972       --> GGGCCAATTTCAAG-TTTGGTTATAGTATCAGACTTGTTTGAAACGGT-G  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> GGGCCAATTTCAAG-TTTGGTTATAGTATCGGACTTGTTTGAAACGGT-G  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963325       --> GGGCCAATTTCAAGGTTTGGTTATAGTATCA...................  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> GGGCCAAT..........................................  Raphanus sativus cv Early Scarlet Globe
FD939350       --> GGGCCAATT.........................................  Raphanus sativus var. oleiformis
EV539294       --> GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAATGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> GGGCCAATTTCAAAGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> GGGCCAATT.........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus var. oleiformis
EY932457       --> GGGCCAATTTCAAG-TTTGGTTATAGTATCGGACTTTTTTGA........  Raphanus sativus var. oleiformis
FD560612       --> GGGCCAATTTCAAGGTTTGGTTATAGTATCGGACTTGTTTGAAACGGTTG  Raphanus sativus var. oleiformis
FD972396       --> GGGCCAATTTCAAGGCTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> GGGCCAATTTCAAGGTTTGGTTATAGTATCAGACTTGTTTGAAACGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN17530        --> AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGTTGAGAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY944676       <-- ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAATA.  Raphanus sativus cv Rat-Tail Radish #3870
FD959669       <-- AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGTTGAGAATA.  Raphanus raphanistrum subsp. maritimus
EX899367       <-- ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAATA.  Raphanus sativus cv Early Scarlet Globe
FD967987       <-- AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967716       <-- AGA-CATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960760       <-- AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGTTGAGAATA.  Raphanus raphanistrum subsp. maritimus
EV540546       <-- AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY440079       <-- ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAATAA  Raphanus sativus cv GSK3-1
FY443516       <-- ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAATAA  Raphanus sativus cv GSK3-1
FD537085       <-- AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATA.  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928181       <-- ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAATAA  Raphanus sativus var. oleiformis
EV543326       <-- AGAgca............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894184       <-- AGAACATCTTCTTTGATATATGTACTTATAACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. maritimus
FD550972       --> AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGT-GAGAAT..  Raphanus raphanistrum subsp. raphanistrum (NY)
EY949096       --> AT-ACATCTTCGTTGATATATGTGCTTATA-CGATGGAAGTgaga.....  Raphanus sativus cv Rat-Tail Radish #3870
FD540629       --> AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATA.  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898010       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD963325       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD964868       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX895156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD939350       --> ..................................................  Raphanus sativus var. oleiformis
EV539294       --> AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAAT..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971644       --> AGA-CATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972001       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536006       --> AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539572       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716202       --> ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGTTGAGAAT..  Raphanus sativus var. oleiformis
EY932457       --> ..................................................  Raphanus sativus var. oleiformis
FD560612       --> ATAACATCTTCGTTGATATATGTGCTTATAACGATGGAAGCTGAGA....  Raphanus sativus var. oleiformis
FD972396       --> AGAACATCTTCGTTGATATATGTACTTATTACGATGGAAGTTGAGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549495       --> AGAACATCTTCGTTGATATATGTACTTATAACGATGGAAGTTGAGAATA.  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN17530        --> ATAACCCTTGTTATTATTTGTGTAAAACAAAAAAAGTACTAGGAATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546860       <-- ATAACCttgatgt.....................................
EY944676       <-- ..................................................
FD959669       <-- ..................................................
EX899367       <-- ..................................................
FD967987       <-- ATAACCCTTGTTAc....................................
FD967716       <-- ATAACC-TTGATATTATTTGTGTAAAACAAAAAAAGTACTAGGAATTAAA
FD960760       <-- ..................................................
EV540546       <-- ATAACCCTTGTTATaaacc...............................
FY440079       <-- ATAACCtg..........................................
FY443516       <-- ATAACCtg..........................................
FD537085       <-- ..................................................
EY928181       <-- ATAACC............................................
EV543326       <-- ..................................................
EY894184       <-- ATAACCttg.........................................
FD550972       --> ..................................................
EY949096       --> ..................................................
FD540629       --> ..................................................
EY898010       --> ..................................................
FD963325       --> ..................................................
FD964868       --> ..................................................
EX895156       --> ..................................................
FD939350       --> ..................................................
EV539294       --> ..................................................
FD971644       --> -TAACC-TTGATATTATTTGTGTAAA-CAAAAAA-GTACTAG-AATTAAA
FD972001       --> ..................................................
EV536006       --> ATAACCCTTGTTATaaacc...............................
EV539572       --> ..................................................
EW716202       --> ..................................................
EY932457       --> ..................................................
FD560612       --> ..................................................
FD972396       --> ATAACCCTTGTTATaaacc...............................
EV549495       --> ..................................................

               801    -    851
UN17530        --> AAAACGAATTGGTAC
                   ~~~~~~~~~~~~~~~
FD546860       <-- ...............
EY944676       <-- ...............
FD959669       <-- ...............
EX899367       <-- ...............
FD967987       <-- ...............
FD967716       <-- AAAACGAATTGGTAC
FD960760       <-- ...............
EV540546       <-- ...............
FY440079       <-- ...............
FY443516       <-- ...............
FD537085       <-- ...............
EY928181       <-- ...............
EV543326       <-- ...............
EY894184       <-- ...............
FD550972       --> ...............
EY949096       --> ...............
FD540629       --> ...............
EY898010       --> ...............
FD963325       --> ...............
FD964868       --> ...............
EX895156       --> ...............
FD939350       --> ...............
EV539294       --> ...............
FD971644       --> AAA............
FD972001       --> ...............
EV536006       --> ...............
EV539572       --> ...............
EW716202       --> ...............
EY932457       --> ...............
FD560612       --> ...............
FD972396       --> ...............
EV549495       --> ...............