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Alignment for radish unigene UN17565

               1      -     51
UN17565        --> CTTAAAGTCATCAAACCCCTTGGAGTAAGACCGGTACCCGGATGGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- ..................................................
FY434623       <-- ..................................................
FY439676       <-- ..................................................
EW732559       <-- ..................................................
EX763745       <-- ..................................................
EX746784       <-- ..................................................
EX773259       <-- ..................................................
FY431876       <-- ..................................................
EW726865       <-- ..................................................
EX755955       <-- ..................................................
EV535073       <-- ..................................................
EX757532       <-- ..................................................
EX763793       <-- ..................................................
EY906433       <-- ..................................................
EY924912       <-- ..................................................
EY937832       <-- ..................................................
FD564761       <-- ..................................................
EV535222       <-- ..................................................
EW714747       <-- ..................................................
EX897349       <-- ..................................................
FD571526       <-- ..................................................
FY430020       <-- ..................................................
FD577585       <-- ..................................................
EX771183       <-- ..................................................
EV565788       <-- ..................................................
FD542817       <-- ..................................................
EX762371       <-- ..................................................
EY939903       <-- ..................................................
AB447948       <-- ..................................................
FD575345       --> CTTAAAGTCATCAAACCCCTTGGAGTAAGACCGGTACCCGGATGGACAAA
FD537221       --> ..................................................
EW737029       --> ..................................................
EX767796       --> ..................................................
EY920510       --> ..................................................
EV539836       --> ..................................................
EX751109       --> ..................................................
EX767839       --> ..................................................
EY902611       --> ..................................................
EY934081       --> ..................................................
FD568159       --> ..................................................
FD581865       --> ..................................................
EV539958       --> ..................................................
EV571057       --> ..................................................
EX766641       --> ..................................................
EX777075       --> ..................................................
EX901122       --> ..................................................
EY935754       --> ..................................................
FD538793       --> ..................................................
EX759876       --> ..................................................
EX761102       --> ..................................................
EY912712       --> ..................................................

               51     -    101
UN17565        --> TAGGTTTAACCGGTTTTCAACAGATAAAGAACGCTATACTTAAAACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- .....................................ACTTAAAACGAGA
FY434623       <-- ..................................................
FY439676       <-- ..................................................
EW732559       <-- ..................................................
EX763745       <-- ..................................................
EX746784       <-- ..................................................
EX773259       <-- ..................................................
FY431876       <-- ..................................................
EW726865       <-- ..................................................
EX755955       <-- ..................................................
EV535073       <-- ..................................................
EX757532       <-- ..................................................
EX763793       <-- ..................................................
EY906433       <-- ..................................................
EY924912       <-- ..................................................
EY937832       <-- ..................................................
FD564761       <-- ..................................................
EV535222       <-- ..................................................
EW714747       <-- ..................................................
EX897349       <-- ..................................................
FD571526       <-- ..................................................
FY430020       <-- ..................................................
FD577585       <-- ..................................................
EX771183       <-- ..................................................
EV565788       <-- ..................................................
FD542817       <-- ..................................................
EX762371       <-- ..................................................
EY939903       <-- ..................................................
AB447948       <-- ..................................................
FD575345       --> TAGGTTTAACCGGTTTTCAACAGATAAAGAACGCTATACTTAAAACGAGA
FD537221       --> .....................................ACTTAAAACGAGA
EW737029       --> ..................................................
EX767796       --> ..................................................
EY920510       --> ..................................................
EV539836       --> ..................................................
EX751109       --> ..................................................
EX767839       --> ..................................................
EY902611       --> ..................................................
EY934081       --> ..................................................
FD568159       --> ..................................................
FD581865       --> ..................................................
EV539958       --> ..................................................
EV571057       --> ..................................................
EX766641       --> ..................................................
EX777075       --> ..................................................
EX901122       --> ..................................................
EY935754       --> ..................................................
FD538793       --> ..................................................
EX759876       --> ..................................................
EX761102       --> ..................................................
EY912712       --> ..................................................

               101    -    151
UN17565        --> TTTTGGAAATGGGATGAAAGTGGTATAGCAAAATAAACAAAATCGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TTT-GGAAATGGGATGAAAGTGGTATAGCAAAATAAACAAAATCGATGCA
FY434623       <-- ................AAAGTGGTATAGCAAAATAAACAAAATCGATGCA
FY439676       <-- ................AAAGTGGTATAGCAAAATAAACAAAATCGATGCA
EW732559       <-- .....................GGTATAGCAAAATAAACAAAATCGATGCA
EX763745       <-- ........................gTAGCAAAATAAACAAAATCGATGCA
EX746784       <-- ......................ttttgGCAAAATAAACAAAATCGATGCA
EX773259       <-- ............................tttttTAAACAAAATCGATGCA
FY431876       <-- ................................tTAAACAAAATCGATGCA
EW726865       <-- .....................................CAAAATCGATGCA
EX755955       <-- ..........................ccaatgaattaatAAATTGATGCA
EV535073       <-- ............................................GATGCA
EX757532       <-- ............................................GATGCA
EX763793       <-- ............................................GATGCA
EY906433       <-- ............................................GATGCA
EY924912       <-- ............................................GATGCA
EY937832       <-- ............................................GATGCA
FD564761       <-- ............................................GATGCA
EV535222       <-- .................................................A
EW714747       <-- .................................................A
EX897349       <-- .................................................A
FD571526       <-- .................................................A
FY430020       <-- .................................................A
FD577585       <-- ..................................................
EX771183       <-- ...............................................atg
EV565788       <-- ..................................................
FD542817       <-- ..................................................
EX762371       <-- ..................................................
EY939903       <-- ..................................................
AB447948       <-- ..................................................
FD575345       --> TAATGGAAATGGGATGAAAGTGGTATAGCAAAATAAACAAAATTGATGCA
FD537221       --> TTTTGGAAATGGGATGAAAGTGGTATAGCAAAATAAACAAAATCGATGCA
EW737029       --> .....................GGTATAGCAAAATAAACAAAATCGATGCA
EX767796       --> ........................gTAGCAAAATAAACAAAATCGATGCA
EY920510       --> .................................TAAACAAAATCGATGCA
EV539836       --> ............................................GATGCA
EX751109       --> ............................................GATGCA
EX767839       --> ............................................GATGCA
EY902611       --> ............................................GATGCA
EY934081       --> ............................................GATGCA
FD568159       --> ............................................GATGCA
FD581865       --> ............................................GATGCA
EV539958       --> .................................................A
EV571057       --> .................................................A
EX766641       --> .................................................A
EX777075       --> .................................................A
EX901122       --> .................................................A
EY935754       --> .................................................A
FD538793       --> .................................................A
EX759876       --> ..................................................
EX761102       --> ..................................................
EY912712       --> ..................................................

               151    -    201
UN17565        --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus sativus cv GSK3-1
FY439676       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus sativus cv GSK3-1
EW732559       <-- TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- TTAAAACATTAATATCTGAACACTCAAATGTGAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. maritimus
EX773259       <-- T-AAAACATTAATATCCGAACACTCGAATGTAGAATT-ATCCATAGATAA  Raphanus raphanistrum subsp. landra
FY431876       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus sativus cv GSK3-1
EW726865       <-- --TAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- TTAAAACATTAATATCTTAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- T-AAAACATTAATATCTGAACACTCAAATGTAAAATTCCTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- TTAAAACATTAATATCCGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. landra
EY937832       <-- TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- TTAAAACATTAATATCTGAACACTCAAATGTGAAATTCTTCCATAGATAA  Raphanus sativus var. oleiformis
EV535222       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- TTAAAACATTAATATCTGAACACTCAAATGTGAAATTCTTCCATAGATAA  Raphanus sativus var. oleiformis
EX897349       <-- TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus sativus cv GSK3-1
FD577585       <-- ..AAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- catAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCACAGATAA  Raphanus raphanistrum subsp. landra
EV565788       <-- ..........................................ATAGATAA  Raphanus raphanistrum subsp. landra
FD542817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FD537221       --> TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> TTAAAACATTAATATCCGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. landra
EV539836       --> TTAAAACATTAATATCTTAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> TTAAAACATTAATATCTGAACACTCAAATGTGAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. maritimus
EX767839       --> TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FD568159       --> TTAAAACATTAATATCTGAACACTCAAATGTGAAATTCTTCCATAGATAA  Raphanus sativus var. oleiformis
FD581865       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. landra
EX766641       --> TTAAAACATTAATATCTGAACACTCAAATGTAAAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> TTAAAACATTAATATCCGAACACTCGAATGTAGAATT-ATCCATAGATAA  Raphanus raphanistrum subsp. landra
EX901122       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
EY935754       --> TTAAAACATTAATATCTGAACACTCAAATGTAGAATTCTTCCATAGATAA  Raphanus sativus cv Early Scarlet Globe
FD538793       --> TTAAAACATTAATATCTGAACACTCGAATGTAGAATTCTTCCATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> .........................................CATAGATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN17565        --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAAATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv GSK3-1
FY439676       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv GSK3-1
EW732559       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. maritimus
EX773259       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. landra
FY431876       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv GSK3-1
EW726865       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAAATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCTCCCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. landra
EY937832       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus sativus var. oleiformis
EV535222       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAAATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus sativus var. oleiformis
EX897349       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv GSK3-1
FD577585       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus raphanistrum subsp. landra
EV565788       <-- AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus raphanistrum subsp. landra
FD542817       <-- .................................CTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FD537221       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAAATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. landra
EV539836       --> A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> A-GGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. maritimus
EX767839       --> A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCTCCCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FD568159       --> A-GGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus sativus var. oleiformis
FD581865       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAAATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus raphanistrum subsp. landra
EX766641       --> A-GGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCTCCCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGATGAAAAGCTCCCTTCT  Raphanus raphanistrum subsp. landra
EX901122       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
EY935754       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAACCCCCGTTCT  Raphanus sativus cv Early Scarlet Globe
FD538793       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> AAGGGATAAAAGCATCCAAAAACATAAACTAAGCTGAAAAGCCCCGTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN17565        --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus cv GSK3-1
FY439676       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus cv GSK3-1
EW732559       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. maritimus
EX773259       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
FY431876       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus cv GSK3-1
EW726865       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
EY937832       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus var. oleiformis
EV535222       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus var. oleiformis
EX897349       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus cv GSK3-1
FD577585       <-- TACATTCCAGTAAAAGCTTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
EV565788       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
FD542817       <-- TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FD537221       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
EV539836       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. maritimus
EX767839       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAAAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FD568159       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCGGGAAT  Raphanus sativus var. oleiformis
FD581865       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
EX766641       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. landra
EX901122       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
EY935754       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus sativus cv Early Scarlet Globe
FD538793       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> TACATTCCAGTAAAAGCCTTCTTCGCGAAAGCAGAAGCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> ...................................aaCACCAGCTGGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN17565        --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FY434623       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FY439676       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EW732559       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX763745       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX746784       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX773259       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FY431876       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EW726865       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX755955       <-- CACCTTCAATACATTGACCCTCACAGTCTTGGACAATGGCCTGCATTGGC
EV535073       <-- AACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX757532       <-- CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX763793       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACACTGGCCTGCATTGGC
EY906433       <-- CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EY924912       <-- CACCTTCAACACATTGAACCTCA-AGTCTTGGACAATGGCCTGCATTGGC
EY937832       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD564761       <-- CACCTTCAACACATTGAACCTCGCAGTCTTGGACAATGGCCTGCATTGGC
EV535222       <-- CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EW714747       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX897349       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD571526       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FY430020       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD577585       <-- CACTTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX771183       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EV565788       <-- CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD542817       <-- CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX762371       <-- .............................................TTGGC
EY939903       <-- ..................................................
AB447948       <-- ..................................................
FD575345       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD537221       --> TACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EW737029       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX767796       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EY920510       --> CACCTTCAACACATTGAACCTCA-AGTCTTGGACAATGGCCTGCATTGGC
EV539836       --> AACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX751109       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX767839       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACACTGGCCTGCATTGGC
EY902611       --> CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EY934081       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD568159       --> CACCTTCAACACATTGAACCTCGCAGTCTTGGACAATGGCCTGCATTGGC
FD581865       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EV539958       --> CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EV571057       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX766641       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACACTGGCCTGCATTGGC
EX777075       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX901122       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EY935754       --> CACCTTCAACACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
FD538793       --> CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX759876       --> CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EX761102       --> CACCTTCAATACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC
EY912712       --> ..........ACATTGAACCTCACAGTCTTGGACAATGGCCTGCATTGGC

               351    -    401
UN17565        --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FY434623       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FY439676       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EW732559       <-- CGATGATGACATGGTCTCCTT-CCTTGACGCGGAAGCATGGTGAGACATG
EX763745       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX746784       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX773259       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FY431876       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EW726865       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX755955       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV535073       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX757532       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX763793       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGAAAGCATGGTGAGACATG
EY906433       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY924912       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY937832       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD564761       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV535222       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EW714747       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX897349       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD571526       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FY430020       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD577585       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX771183       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV565788       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD542817       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX762371       <-- CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY939903       <-- ......TGACATGGTCTCCTTTCCTTGACACGGAAGCATGGTGAGACATG
AB447948       <-- ..................................................
FD575345       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD537221       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EW737029       --> CGATGATGACATGGTCTCCTT-CCTTGACGCGGAAGCATGGTGAGACATG
EX767796       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY920510       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV539836       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX751109       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX767839       --> CGATGATGACATGGTCTCCTT-CCTTGACACGAAAGCATGGTGAGACATG
EY902611       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY934081       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD568159       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD581865       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV539958       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EV571057       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX766641       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX777075       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX901122       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY935754       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
FD538793       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EX759876       --> CGATGATGACATGGTCTC................................
EX761102       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG
EY912712       --> CGATGATGACATGGTCTCCTT-CCTTGACACGGAAGCATGGTGAGACATG

               401    -    451
UN17565        --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCATACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- AGCAGGGATGTTTGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv GSK3-1
FY439676       <-- AGCAGGGATGTTTGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv GSK3-1
EW732559       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- AGCAGGGATGTTGGAGTGCCTCTTATCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- AGCAGGGATGTTGGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. maritimus
EX773259       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
FY431876       <-- AGCAGGGATGTTTGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv GSK3-1
EW726865       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACATCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
EY937832       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus var. oleiformis
EV535222       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus var. oleiformis
EX897349       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTGCCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- AGCAGGGATGTTTGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv GSK3-1
FD577585       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- AGCAGGGATGTTGGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
EV565788       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
FD542817       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATATTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- AGCAGGGATGTTCGAGTGCCACTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTGCCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD537221       --> AGCAGGGATGTTCGAGTGCCTCTTCTCATACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> AGCAGGGATGTTGGAGTGCCTCTTATCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> AACAGGGATGTTCGAGTGCCTCTT..........................  Raphanus raphanistrum subsp. landra
EV539836       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> AGCAGGGATGTTGGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. maritimus
EX767839       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD568159       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus var. oleiformis
FD581865       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
EX766641       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. landra
EX901122       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
EY935754       --> AGCAGGGATGTTCGAGTGCCACTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD538793       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> AGCAGGGATGTTCGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> AGCAGGGATGTTGGAGTGCCTCTTCTCGTACCTCTGATACTTCTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN17565        --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCACTG  Raphanus sativus cv GSK3-1
FY439676       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCACTG  Raphanus sativus cv GSK3-1
EW732559       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- AGTGGAGATAGTTCCTTCTGACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. maritimus
EX773259       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. landra
FY431876       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCACTG  Raphanus sativus cv GSK3-1
EW726865       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. landra
EY937832       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- AGTGAAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus var. oleiformis
EV535222       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- AGTGAAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus var. oleiformis
EX897349       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCACTG  Raphanus sativus cv GSK3-1
FD577585       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCACTG  Raphanus raphanistrum subsp. landra
EV565788       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. landra
FD542817       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGCCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FD537221       --> AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> ..................................................  Raphanus raphanistrum subsp. landra
EV539836       --> AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> AGTGGAGATAGTTCCTTCTGACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. maritimus
EX767839       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> AGTGGAAATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FD568159       --> AGTGAAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus var. oleiformis
FD581865       --> AGTGGAAATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> AGTGGAGATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. landra
EX766641       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. landra
EX901122       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
EY935754       --> AGTGGAGATAGTTCCTTCTCACGATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus sativus cv Early Scarlet Globe
FD538793       --> AGTGGAGATAGTTCCTTCTCACGATGATGGCCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> AGTGGAAATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> AGTGGAAATAGTTCCTTCTCACAATGATGGTCCTCTGCATCTTGGCGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN17565        --> TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus cv GSK3-1
FY439676       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus cv GSK3-1
EW732559       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- TGGCAAATACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. maritimus
EX773259       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATGGAGACAGTTCCGGTAAA  Raphanus raphanistrum subsp. landra
FY431876       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus cv GSK3-1
EW726865       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- TGGCAAGTACCAGCTAAGATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- TGGCAAGTACCAGCTAAGATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- TGGCAAGTACCAGCTAAGATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATGGAGACAGTTCCGGTAAA  Raphanus raphanistrum subsp. landra
EY937832       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus var. oleiformis
EV535222       <-- TGGCAAGTACCGGCTAAGATACGGCCTATGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus var. oleiformis
EX897349       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus cv GSK3-1
FD577585       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. landra
EV565788       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. landra
FD542817       <-- TGGCAAGTACCAGATAAGATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- ........ACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD537221       --> TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> TGGCAAATACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> ..................................................  Raphanus raphanistrum subsp. landra
EV539836       --> TGGCAAGTACCAGCTAAAATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. maritimus
EX767839       --> TGGCAAGTACCGGCTAAAATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> TGGCAAGTACCAGCTAAAATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD568159       --> TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus sativus var. oleiformis
FD581865       --> TGGCAAGTACCGGCTAAAATACGGCCTCTAATAAAGACAGTTCCGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> TGGCAAGTACCGGCTAAGATACGGCCTATGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. landra
EX766641       --> TGGCAAGTACCGGCTAAAATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> TGGCAAGTACCGGCTAAGATACGGCCTCTAATGGAGACAGTTCCGGTAAA  Raphanus raphanistrum subsp. landra
EX901122       --> TGGCAAGTACCGGCTAAAATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
EY935754       --> TGGCAAGTACCGGCTAAAATACGGCCTCTAATAGAGACAGTTCCGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD538793       --> TGGCAAGTACCAGATAAGATACGGCCTCTGATGGAAACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> TGGCAAGTACCGGCTAAAATACGGCCTCTGATGGAGACAGTTCCAGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> TGGCAAGTACCGGCTAAGATACGGCCTCTGATGGAGACAGTTCCGGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN17565        --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
FY434623       <-- TGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FY439676       <-- TGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EW732559       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX763745       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAATCT
EX746784       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX773259       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FY431876       <-- TGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EW726865       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX755955       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EV535073       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EX757532       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EX763793       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY906433       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY924912       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY937832       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD564761       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EV535222       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EW714747       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX897349       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD571526       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FY430020       <-- TGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD577585       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX771183       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EV565788       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTCCACGAGGAGTCT
FD542817       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX762371       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY939903       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
AB447948       <-- GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD575345       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD537221       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EW737029       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX767796       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAATCT
EY920510       --> ..................................................
EV539836       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EX751109       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX767839       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY902611       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY934081       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD568159       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD581865       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EV539958       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EV571057       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTCCACGAGGAGTCT
EX766641       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX777075       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX901122       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EY935754       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
FD538793       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT
EX759876       --> ..................................................
EX761102       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATAGCTTCACGAGGAGTCT
EY912712       --> GGGACATTTTCTGTCAATGTAAGTTCCTTGAATGGCTTCACGAGGAGTCT

               601    -    651
UN17565        --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
FY434623       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FY439676       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EW732559       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTACACCCTTCCCAGGT
EX763745       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EX746784       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX773259       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FY431876       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EW726865       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX755955       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAAC....................
EV535073       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX757532       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EX763793       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EY906433       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTTCCAGGT
EY924912       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCGCCCTTCCCAGGT
EY937832       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD564761       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EV535222       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EW714747       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX897349       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD571526       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FY430020       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD577585       <-- TGAA..............................................
EX771183       <-- TGAAGCCCAAACCGATGTTCTTAGAGAAACGGTTTCCACCCTTCCCAGGC
EV565788       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD542817       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTTCCAGGT
EX762371       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EY939903       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
AB447948       <-- TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD575345       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD537221       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EW737029       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTACACCCTTCCCAGGT
EX767796       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EY920510       --> ..................................................
EV539836       --> TGAAGCCCAAACCGATGTTCTTGGAAAAACGGTTTCCACCCTTCCCAGGT
EX751109       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX767839       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EY902611       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTTCCAGGT
EY934081       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD568159       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD581865       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EV539958       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT
EV571057       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX766641       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX777075       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
EX901122       --> TGAAGCCCAAACCGATGTTCTTGGAAAAACGGTTTCCACCCTTCCCAGGT
EY935754       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTCCCAGGT
FD538793       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCCTTTCCAGGT
EX759876       --> ..................................................
EX761102       --> TGAAGCCCAAACCGATGTTCTTGG..........................
EY912712       --> TGAAGCCCAAACCGATGTTCTTGGAGAAACGGTTTCCACCTTTCCCAGGT

               651    -    701
UN17565        --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- CGCTTTCCCTTTCCAGATATCTTCGAACTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv GSK3-1
FY439676       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv GSK3-1
EW732559       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. maritimus
EX773259       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. landra
FY431876       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv GSK3-1
EW726865       <-- CGCTTTCCCTTTACAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- CGCTTTCCCTTTCCAGATATCTTCGAACTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGc.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. landra
EY937832       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus var. oleiformis
EV535222       <-- CGCTTTCCCTTTCCAGATATCTTCGAACTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus var. oleiformis
EX897349       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv GSK3-1
FD577585       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. landra
EV565788       <-- CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. landra
FD542817       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> CGCTTTCCCTTTCCAGATATCTT...........................  Raphanus sativus cv Early Scarlet Globe
FD537221       --> CGCTTTCCCTTTCCAGATATCTTCGAACTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> ..................................................  Raphanus raphanistrum subsp. landra
EV539836       --> CGCTTTCCCTTTCCAAATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGA................  Raphanus raphanistrum subsp. maritimus
EX767839       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGc.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD568159       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus var. oleiformis
FD581865       --> CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGA................  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> CGCTTTCCCTTTCCAGATATCTTCGAACTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> CGCTTTCCTTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGTTGCTT  Raphanus raphanistrum subsp. landra
EX766641       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus raphanistrum subsp. landra
EX901122       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
EY935754       --> CGCTTTCCCTTTCCAGATATCTTCGAGCTAAGGAAGACCTTAGGCTGCTT  Raphanus sativus cv Early Scarlet Globe
FD538793       --> CGCTTTCCCTTTCCAGATATCTTCGAGCT.....................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> CGCTTTCCTTTTCCAGATATCTT...........................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN17565        --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FY434623       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGT--TGTGAAAGC
FY439676       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGT--TGTGAAAGC
EW732559       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGT--TGTGAAAGC
EX763745       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX746784       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCAGCTGTTTTGTGAAAGC
EX773259       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FY431876       <-- ag................................................
EW726865       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX755955       <-- ..................................................
EV535073       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX757532       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX763793       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EY906433       <-- ..................................................
EY924912       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGATGCTGTTTTGTGAAAGC
EY937832       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FD564761       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EV535222       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EW714747       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX897349       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FD571526       <-- TAGAAAAGCCTTCTCAGACTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FY430020       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTgtgaaagc...
FD577585       <-- ..................................................
EX771183       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EV565788       <-- TAGAAAAGCCTTCTCAGTCAGTTCCGCCATGGCTGCTGT--TGTGAAAGC
FD542817       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGTTGCTGTTTTGTGAAAGC
EX762371       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EY939903       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
AB447948       <-- TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FD575345       --> ..................................................
FD537221       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EW737029       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTT--GTGAAAGC
EX767796       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EY920510       --> ..................................................
EV539836       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX751109       --> ..................................................
EX767839       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EY902611       --> ..................................................
EY934081       --> TAGAAAAGC.........................................
FD568159       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FD581865       --> ..................................................
EV539958       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EV571057       --> TAGAAAAGCCTTCTCAGTCAGTTCCGCCATGGCTGCTGTT--GTGAAAGC
EX766641       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX777075       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EX901122       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
EY935754       --> TAGAAAAGCCTTCTCAGTCTGTTCCGCCATGGCTGCTGTTTTGTGAAAGC
FD538793       --> ..................................................
EX759876       --> ..................................................
EX761102       --> ..................................................
EY912712       --> ..................................................

               751    -    801
UN17565        --> TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- TTGAGG-CGAGGATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY434623       <-- TTGAGG-CAAGAA.....................................  Raphanus sativus cv GSK3-1
FY439676       <-- TTGAGG-CAAGAA.....................................  Raphanus sativus cv GSK3-1
EW732559       <-- TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX763745       <-- TTGAGGGCAAGAATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746784       <-- TAGAGG-CAAGAATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. maritimus
EX773259       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
FY431876       <-- ..................................................  Raphanus sativus cv GSK3-1
EW726865       <-- TTGAGG-CAAGGATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
EX755955       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535073       <-- TTGAGG-CAAGGATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757532       <-- TTGAGG-CGAGGATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763793       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906433       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924912       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
EY937832       <-- TTGAGG-CAAGGATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
FD564761       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus sativus var. oleiformis
EV535222       <-- TTGAGG-CGAGGATGTAGGCGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714747       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus sativus var. oleiformis
EX897349       <-- TTGAGG-CAAGGATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
FD571526       <-- TTGAGG-CAAGGATGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
FY430020       <-- ..................................................  Raphanus sativus cv GSK3-1
FD577585       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771183       <-- TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
EV565788       <-- TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
FD542817       <-- TTGAGG-AAAGAACGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762371       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939903       <-- TTGAGG-CAAGGGTGTAGGAGAC-----GATA-----GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
AB447948       <-- TTGGGG-CAAGAATGTAGGAGACGATATGATA-----TGATAGGagaggc  Raphanus sativus cv Sakurajima Daikon var. niger
FD575345       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537221       --> TTGAGG-CGAGGATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737029       --> TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX767796       --> TTGAGGGCAAGAATGTAGaga.............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920510       --> ..................................................  Raphanus raphanistrum subsp. landra
EV539836       --> TTGAGG-CAAGGATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751109       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX767839       --> TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902611       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY934081       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568159       --> ..................................................  Raphanus sativus var. oleiformis
FD581865       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV539958       --> TTGAGG-CGAGGATGTAGGCGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571057       --> TTGAGG-CAAGAATGTAGGAGACGATATGATA-----GGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
EX766641       --> TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777075       --> TTGGGG-CAAGAATGTAGGAGACGATATGATATGATAGGAGAGGCAGAGA  Raphanus raphanistrum subsp. landra
EX901122       --> TTGAGG-CAAGGATGTAGGAGACGATA----------GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
EY935754       --> TTGAGG-CAAGGGTGTAGGAGACGATA----------GGAGAGGCAGAGA  Raphanus sativus cv Early Scarlet Globe
FD538793       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759876       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX761102       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912712       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN17565        --> CGGCTAAAGCTTCGAGAACCC
                   ~~~~~~~~~~~~~~~~~~~~~
FD540787       <-- CGGCTAAAGCTTCGAGcc...
FY434623       <-- .....................
FY439676       <-- .....................
EW732559       <-- CGGCTAAAGCTTCcc......
EX763745       <-- CGGCTAAAGCTTCcc......
EX746784       <-- CGGCTAAAACTTCGAGc....
EX773259       <-- CGGCTAAAGCTTCc.......
FY431876       <-- .....................
EW726865       <-- CGGCTAAAGCTTCGAGcc...
EX755955       <-- .....................
EV535073       <-- CGGCTAAAGCTTCcc......
EX757532       <-- CGGCTAAAGCTTCGAGcc...
EX763793       <-- CGGCTAAAGCTTCcc......
EY906433       <-- .....................
EY924912       <-- CGGCTAAAGCTTCGAGcc...
EY937832       <-- CGGCTAA-GCTTCcc......
FD564761       <-- CGGCTAAAGCTTCcc......
EV535222       <-- CGGCTAAAGCTTCGAGAgtc.
EW714747       <-- CGGCTAAAGCTTCGAGcc...
EX897349       <-- CGGCTAAAGCTTCGAGAACCC
FD571526       <-- CGGCTAAAGCTTCcc......
FY430020       <-- .....................
FD577585       <-- .....................
EX771183       <-- CGGCTAAAGCTTCGAGcc...
EV565788       <-- CGGCTAAAGCTTCGAGcc...
FD542817       <-- CGGCTAAAGCTTCcc......
EX762371       <-- CGGCTAAAGCTTCcc......
EY939903       <-- CGGCTAAAGCTTCGAGcc...
AB447948       <-- agagacggc............
FD575345       --> .....................
FD537221       --> CGGCTAAAGCTTCGAGcc...
EW737029       --> CGGCTAAAGCTTCcc......
EX767796       --> .....................
EY920510       --> .....................
EV539836       --> CGGCTAAAGCTTCcc......
EX751109       --> .....................
EX767839       --> CGGCTAAAGCTTCcc......
EY902611       --> .....................
EY934081       --> .....................
FD568159       --> .....................
FD581865       --> .....................
EV539958       --> CGGCTAAAGCTTCGAGAgtc.
EV571057       --> CGGCTAAAGCTTCGAGcc...
EX766641       --> CGGCTAAAGCTTCcc......
EX777075       --> CGGCTAAAGCTTCc.......
EX901122       --> CGGCTAAAGCTTCGAGAACCC
EY935754       --> CGGCTAAAGCT..........
FD538793       --> .....................
EX759876       --> .....................
EX761102       --> .....................
EY912712       --> .....................