Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17638

               1      -     51
UN17638        --> GGAAAGACATAAATGTGCACCTCACCTTATCAAACCTAAAAGTCAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ..................................................
EX900800       <-- ..................................................
EV547477       <-- ..................................................
EW720029       <-- ..................................................
EW730836       <-- ..................................................
FD961031       <-- ..................................................
FD546966       <-- ..................................................
EX769052       <-- ..................................................
FD553281       <-- ..................................................
EY926953       <-- ..................................................
EX767054       <-- ..................................................
FD562512       --> GGAAAGACATAAATGTGCACCTCACCTTATCAAACCTAAAAGTCAGCAAA
EV552589       --> ............................ggCAAACCTAAAAGCCAGCAAA
EX755318       --> ............................ggaAAACCTAAAAGTCAGCAAA
EX905493       --> .............................ggAAACCTAAAAGTCAGCAAA
EY929858       --> .............................ggAAACCTAAAAGTCAGCAAA
EY930868       --> ............................ggaAAACCTAAAAGTCAGCAAA
FD563148       --> ...........................gggaAAACCTAAAAGTCAGCAAA
FD579420       --> .............................ggAAACCTAAAAGTCAGCAAA
FD941172       --> .............................ggAAACCTAAAAGTCAGCAAA
FD965232       --> ............................ggaAAACCTAAAAGTCAGCAAA
FD972110       --> .............................ggAAACCTAAAAGTCAGCAAA
FD535913       --> ..............................ggAACCTAAAAGTCAGCAAA
EV527328       --> ...............................ggACCTAAAAGTCAGCAAA
EX762879       --> ...............................ggACCTAAAAGTCAGCAAA
FD563413       --> ...............................ggACCTAAAAGTCAGCAAA
FD532384       --> .................................ggCTAAAAGTCAGCAAA
EX896955       --> ...................................ggAAAAGTCAGCAAA
FD551097       --> ..........................................TCAGCAAA
EW725557       --> ..........................................ggAGCAAA
EY908063       --> ..............................................gAAA
FD557096       --> ..................................................
FD971324       --> ..................................................
FY441987       --> ..................................................
EY908031       --> ..................................................
FD949141       --> ..................................................
EW715425       --> ..................................................

               51     -    101
UN17638        --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ...................tctCTCATAAGC-TTATTT-CCACAT-ATCA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- .............................taagctaTTTCCACAT-ATCA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- ........................................CACAT--TCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ...........................................AT--TCA  Raphanus sativus var. oleiformis
EW730836       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY926953       <-- ..................................................  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
EV552589       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> CCAAAGGCACATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
EY930868       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
FD563148       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
FD579420       --> CCAAAGGCACATTCCTCTTCTCCTCATAAGTCTTATTTTCCACATATTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
FD965232       --> CTAAAGGCATATTCCTCTTCTCCTCACAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. maritimus
FD972110       --> CCAAAGGCATATTCCCCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> CTAAAGGCATATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. maritimus
EV527328       --> CTAAAGGCATATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. maritimus
EX762879       --> CTAAAGGCATATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus sativus var. oleiformis
FD532384       --> CTAAAGGCATATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. maritimus
EX896955       --> CCAAAGGCACATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> CTAAAGGCATATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> CCAAAGGCACATTCCTCTTCTCCTCATAAGCCTTATTTTCCACATATTCA  Raphanus sativus cv Early Scarlet Globe
EY908063       --> CCAAAGGCATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ......ggATATTCCTCTTTTCCTCATAAGCCTTATTTTCCACAT--TCA  Raphanus raphanistrum subsp. landra
FD971324       --> .........................................gCAT--TCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> ...........................................AT--TCA  Raphanus sativus cv GSK3-1
EY908031       --> ...............................................gCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN17638        --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACT--TAA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- GATTCAAGAATCCATGGCGATCACGAAGCTCCTCT-CGCTTCACTTCTAA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
EW730836       <-- ..........TCCATGGCGATCACGAAGCTC-TCTTCGCTTCACTTCTAA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD546966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY926953       <-- ..................................................  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
EV552589       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
EY930868       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
FD563148       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
FD579420       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
FD965232       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus raphanistrum subsp. maritimus
FD972110       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTT--AA  Raphanus raphanistrum subsp. maritimus
EV527328       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus raphanistrum subsp. maritimus
EX762879       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus sativus var. oleiformis
FD532384       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus raphanistrum subsp. maritimus
EX896955       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus sativus cv Early Scarlet Globe
EY908063       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> GATTCAAGAATCCATGGCGATCACTAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. landra
FD971324       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTCGCTTCACTTCTAA  Raphanus sativus cv GSK3-1
EY908031       --> GATTCAAGAATCCATGGCGATCACGAAGCTCCTCTTAGCTTCACTTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ................................gCTTCGCTTCACTTCTAA  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN17638        --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EX900800       <-- TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EV547477       <-- TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EW720029       <-- TATGCTCCATGATCCAATCCCAGTCATGGTGCTACCAAAGAGAGACTCTT
EW730836       <-- TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD961031       <-- ..................CC-AGTCATGGTGCTACCAAGGAGAGACTCTT
FD546966       <-- ..................................................
EX769052       <-- ..................................................
FD553281       <-- ..................................................
EY926953       <-- ..................................................
EX767054       <-- ..................................................
FD562512       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EV552589       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EX755318       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EX905493       --> TATACTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EY929858       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EY930868       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD563148       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD579420       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGGGAGACTCTT
FD941172       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD965232       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAGGAGAGACTCTT
FD972110       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD535913       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EV527328       --> TACGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EX762879       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD563413       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD532384       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EX896955       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD551097       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EW725557       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EY908063       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD557096       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD971324       --> TATACTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FY441987       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EY908031       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
FD949141       --> TATGCTCCATGATCCAATCC-AGTCATGGTGCTACCAAAGAGAGACTCTT
EW715425       --> .............................TGCTACCAAAGAGAGACTCTT

               201    -    251
UN17638        --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
EW730836       <-- CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
FD546966       <-- ...........AGAAAG-TGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- ................GGTGCACTTGAGGTCACCGCTACACCCCAGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY926953       <-- ..................................................  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACATCC-AGCCGA  Raphanus sativus var. oleiformis
EV552589       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> CACCGACCTGGAGAAATGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
EY930868       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
FD563148       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
FD579420       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
FD965232       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
FD972110       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
EV527328       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
EX762879       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis
FD532384       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. maritimus
EX896955       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> CACCGACCTGGAGAAAGGTGCACTTGAGGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Early Scarlet Globe
EY908063       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. landra
FD971324       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv GSK3-1
EY908031       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> CACCGACCTGGAGAAAGGTGCACTTGAGATCACCGCTACACCC-AGCCGA  Raphanus sativus cv Early Scarlet Globe
EW715425       --> CACCGACCTGGAGAAAGGTGCACTTGAAGTCACCGCTACACCC-AGCCGA  Raphanus sativus var. oleiformis

               251    -    301
UN17638        --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
EX900800       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- AC---TGTAGGTGTCGTTTTGGCTGCCGGAGTTGATAGGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ACTG---GAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
EW730836       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
FD546966       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- ..............CGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. landra
EY926953       <-- ..................................................  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
EV552589       --> ACTGTA---GGTGTCGTTTTGGCTGCCGGAGTTGATAGGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> ATTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> ACTGGA---GGTGCCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
EY930868       --> A-TGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
FD563148       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
FD579420       --> GCTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTAAGCATTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
FD965232       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
FD972110       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGATTTGATAAGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
EV527328       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
EX762879       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTTATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis
FD532384       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. maritimus
EX896955       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Early Scarlet Globe
FD551097       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Early Scarlet Globe
EY908063       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus raphanistrum subsp. landra
FD971324       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv GSK3-1
EY908031       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGTTGAGCATTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ACTGGACAAGGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ACTGGA---GGTGTCGTTTTGGCTGCCGGAGTTGATAAGCTGAGCATTAC  Raphanus sativus var. oleiformis

               301    -    351
UN17638        --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- GTGGAAGGTAAGCTCGACGGCTACCAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
EW730836       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- ATGGAAGGTGAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
FD546966       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. landra
EY926953       <-- ............CTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
EV552589       --> GTGGAAGGTAAGCTCGACGGCTACCAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> GTGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGACCATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
EY930868       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
FD563148       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
FD579420       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
FD965232       --> ATGGAAGGTGAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
FD972110       --> GTGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
EV527328       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
EX762879       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis
FD532384       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. maritimus
EX896955       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Early Scarlet Globe
EY908063       --> GTGGAAGGTAAGCTCGACGGCTACCAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ATGGAAGGGAAGCTCGACGGC.............................  Raphanus raphanistrum subsp. landra
FD971324       --> GTGGAAGGTAAGCTCGACGGCTACCAATGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv GSK3-1
EY908031       --> GTGGAAGGTAAGCTCGACGGCTACCAAGGAGGCTGAATTTAAGATCATTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ATGGAAGGTAAGCTCGACGGCTACAAAGGAGGCTGAATTTAAGATCATTA  Raphanus sativus var. oleiformis

               351    -    401
UN17638        --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX900800       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EV547477       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EW720029       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAAAGTGGACCGACCAT....
EW730836       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD961031       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD546966       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX769052       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD553281       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EY926953       <-- AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX767054       <-- ..................................................
FD562512       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EV552589       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX755318       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX905493       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EY929858       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EY930868       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD563148       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD579420       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD941172       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD965232       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD972110       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD535913       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EV527328       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX762879       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD563413       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD532384       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EX896955       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD551097       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EW725557       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EY908063       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD557096       --> ..................................................
FD971324       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FY441987       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EY908031       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
FD949141       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG
EW715425       --> AAGTAAAGCTATGCTACGCTCCGGTCAGCCAA-GTGGACCGACCATGGCG

               401    -    451
UN17638        --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX900800       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EV547477       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EW720029       <-- ..................................................
EW730836       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD961031       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGACCT
FD546966       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCCGCCCACACAAGATCT
EX769052       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCAGCCCACACAAGATCT
FD553281       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EY926953       <-- CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX767054       <-- ..................................................
FD562512       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EV552589       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX755318       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX905493       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EY929858       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EY930868       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD563148       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD579420       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD941172       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD965232       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGACCT
FD972110       --> CAAGACCCATAATGGGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD535913       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EV527328       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX762879       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD563413       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD532384       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EX896955       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD551097       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCCGCCCACACAAGATCT
EW725557       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EY908063       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD557096       --> ..................................................
FD971324       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FY441987       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EY908031       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
FD949141       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT
EW715425       --> CAAGACCCATAATGAGCTCTTCAAGGACAAGAGCTGCCCACACAAGATCT

               451    -    501
UN17638        --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX900800       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EV547477       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EW720029       <-- ..................................................
EW730836       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD961031       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD546966       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX769052       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD553281       <-- CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EY926953       <-- CTTCACTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX767054       <-- ..................................................
FD562512       --> CTTCATTT-CCCTATGACCCA-ACTGTCAAAACCGCTCAATCATTCGACT
EV552589       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX755318       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX905493       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EY929858       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EY930868       --> CTTCACTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD563148       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD579420       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD941172       --> CTTCATTT-CCCTATGACCCA-ACTGTCAAAACCGCTCAATCATTCGACT
FD965232       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD972110       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD535913       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EV527328       --> CTTCATTT-CTCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX762879       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD563413       --> CTTCATTT-CCCTATGACCCA-ACTGTCAAAACCGCTCAATCATTCGACT
FD532384       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EX896955       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD551097       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EW725557       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EY908063       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD557096       --> ..................................................
FD971324       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FY441987       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EY908031       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
FD949141       --> CTTCATTT-CCCTATGACCCC-ACTGTCAAAACCGCTCAATCATTCGACT
EW715425       --> CTTCATTTTCCCTATGACCCCCACTGTCAAAACCGCTCAATCATTCGACT

               501    -    551
UN17638        --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX900800       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EV547477       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EW720029       <-- ..................................................
EW730836       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD961031       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD546966       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX769052       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD553281       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EY926953       <-- ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX767054       <-- ..................................................
FD562512       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EV552589       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX755318       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX905493       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EY929858       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EY930868       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD563148       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD579420       --> ATACCCCTCGAGCGCGACATCCCC-ACAGGGACCTAC---GTTCGTGCCT
FD941172       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD965232       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD972110       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD535913       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EV527328       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX762879       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD563413       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD532384       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EX896955       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD551097       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EW725557       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EY908063       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD557096       --> ..................................................
FD971324       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTGCGTTCGTGCCT
FY441987       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EY908031       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
FD949141       --> ATACCC-TCGAGCGCGACATCCCC-ACAGGGACCTACTACGTTCGTGCCT
EW715425       --> ATACCCCTCGAGCGCGACATCCCCCACAGGGACCTACTACGTTCGTGCCT

               551    -    601
UN17638        --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX900800       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EV547477       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EW720029       <-- ..................................................
EW730836       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD961031       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD546966       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX769052       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD553281       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EY926953       <-- ACGCAGTTGATGCCCAGGACCATGAAGTTGCCCTTGGACAGACCACAAAC
EX767054       <-- ..................................................
FD562512       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACTACAAAC
EV552589       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX755318       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX905493       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EY929858       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EY930868       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCCTTGGACAGACCACAAAC
FD563148       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD579420       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD941172       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACTACAAAC
FD965232       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCAC....
FD972110       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD535913       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EV527328       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX762879       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD563413       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACTACAAAC
FD532384       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EX896955       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD551097       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EW725557       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EY908063       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD557096       --> ..................................................
FD971324       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FY441987       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EY908031       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
FD949141       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCTTTGGACAGACCACAAAC
EW715425       --> ACGCAGTTGATGCCCAGGACCATGAAGTTGCCT.................

               601    -    651
UN17638        --> GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ..................................................  Raphanus sativus var. oleiformis
EW730836       <-- GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. maritimus
FD546966       <-- GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- GAGGCCTAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- GAGGCCAAAACAACCAATTTCTTCAGTGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. landra
EY926953       <-- GAGGCCAAAACAACCAATTTTTTCAGTGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAG.........  Raphanus sativus var. oleiformis
EV552589       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAG-CTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCCATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> GAGGCCAAAACAACCAATCTCTTCAGTGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
EY930868       --> GAGGCCAAAACAACCAATCTCTTCAGTGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
FD563148       --> GAGGCCAAAACAACCAATCTCTTCAGTGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
FD579420       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
FD965232       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972110       --> GAGGCCAAGACAACCAATCTCTTCAGCG......................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. maritimus
EV527328       --> GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. maritimus
EX762879       --> GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus var. oleiformis
FD532384       --> GAG-CCAAGACAACCGATCTCTTCAGCGTTCACGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. maritimus
EX896955       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> GAGGCCAAGACAACCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv Early Scarlet Globe
EY908063       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971324       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGGCTATTAGTGGCCGCCA  Raphanus sativus cv GSK3-1
EY908031       --> GAGGCCAAGACAACCAATCTCTTCAGCGTTCAGGCTATTAGTGGTCGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> GAGGCCAAGACAGCCGATCTCTTCAGCGTTCAGTCTATTAGTGGCCGCCA  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN17638        --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EX900800       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EV547477       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCTTGG
EW720029       <-- ..................................................
EW730836       <-- CGAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD961031       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTTTCCGTCGTGG
FD546966       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EX769052       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD553281       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCATCTTTTCCGTCGTGG
EY926953       <-- CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCATTTTTTCCGTCGTGG
EX767054       <-- ..................................................
FD562512       --> ..................................................
EV552589       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCTTGG
EX755318       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EX905493       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EY929858       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCATCTTCTCCGTCGTGG
EY930868       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCATCTTCTCCGTCGTGG
FD563148       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCATCTTCTCCGTCGTGG
FD579420       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD941172       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD965232       --> ..................................................
FD972110       --> ..................................................
FD535913       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EV527328       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EX762879       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD563413       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD532384       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EX896955       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD551097       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EW725557       --> CGAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EY908063       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD557096       --> ..................................................
FD971324       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FY441987       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EY908031       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
FD949141       --> CAAATCCTTAGATATTGCCTCTGTCTGTTTCAGCGTCTTCTCCGTCGTGG
EW715425       --> ..................................................

               701    -    751
UN17638        --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. maritimus
EX900800       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- CTCTTCTCGTCTTCTTTGTGAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ..................................................  Raphanus sativus var. oleiformis
EW730836       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. maritimus
FD546966       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- CTCTTTTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. landra
EY926953       <-- CTCTTTTCGTTTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> ..................................................  Raphanus sativus var. oleiformis
EV552589       --> CTCTTCTCGTCTTCTTTGTGAACGAAAAGAGGAAAGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> CTCTTCTCGTCTTCTTTGT-GACGAAAAGAGGA-GGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> CTCTTCTCGTCTTCTTTGTTAAC...........................  Raphanus sativus var. oleiformis
EY930868       --> CTCTTCTCGTCT......................................  Raphanus sativus var. oleiformis
FD563148       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus var. oleiformis
FD579420       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGA-GGCCAAGATAGAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGG..................  Raphanus sativus var. oleiformis
FD965232       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972110       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. maritimus
EV527328       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAGGCTAAGATAGAGCAA  Raphanus raphanistrum subsp. maritimus
EX762879       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGAAAG-CTAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> CT-TCTTCGTCTTCTTTGTTAACGAAAAGAG...................  Raphanus sativus var. oleiformis
FD532384       --> CTCTTCTCGTCTTCTTTGTTA-CGAAA-GAGAAAG--CTAGATAGAGCAA  Raphanus raphanistrum subsp. maritimus
EX896955       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGA-GGCCAAGATAGAGCAA  Raphanus sativus cv Early Scarlet Globe
FD551097       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGa..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> CTCTTCTCGTCTTCTTTGTTAAC...........................  Raphanus sativus cv Early Scarlet Globe
EY908063       --> CTCTTCTCGTCTTCTTTGTGAACGAAAAGA....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971324       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAAGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> CTCTTCTCGTCTTCTTTGTTAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus sativus cv GSK3-1
EY908031       --> CTCTTCTCGTCTTCTTTGTGAACGAAAAGAGGAAGGCCAAGATAGAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> CTCTTCTCGTCT......................................  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN17638        --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAA-AAAAAGGCGTTGACT  Raphanus raphanistrum subsp. maritimus
EX900800       <-- AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- AGCAAATGAGGCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ..................................................  Raphanus sativus var. oleiformis
EW730836       <-- AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAA-AAAAAGGCGTTGACT  Raphanus raphanistrum subsp. maritimus
FD546966       <-- AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAA-AAAAAGGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- AGCAATTGAGTCGTTTGCGTATTGCGACGTTGAA-AAAAAGGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- AGCAAATGAGCCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus raphanistrum subsp. landra
EY926953       <-- AGCAAATGAGCCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus sativus var. oleiformis
EX767054       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> ..................................................  Raphanus sativus var. oleiformis
EV552589       --> AGCAAATGAG-CGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> -GCAAATGAGT.......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAG-CGTTGACT  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> ..................................................  Raphanus sativus var. oleiformis
EY930868       --> ..................................................  Raphanus sativus var. oleiformis
FD563148       --> AGCAAATGAGCCGTTTGCGTATTGCGACGTTGAGCAAAA...........  Raphanus sativus var. oleiformis
FD579420       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAA................  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> ..................................................  Raphanus sativus var. oleiformis
FD965232       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972110       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> AGCAAATGAGTCGTTTGCGTATTGCGA.......................  Raphanus raphanistrum subsp. maritimus
EV527328       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAA................  Raphanus raphanistrum subsp. maritimus
EX762879       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAAAAAAA...........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> ..................................................  Raphanus sativus var. oleiformis
FD532384       --> -GCAA-TGAGTCGTTTGCGTATTGCGACGTgaaaaaa.............  Raphanus raphanistrum subsp. maritimus
EX896955       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACA..............  Raphanus sativus cv Early Scarlet Globe
FD551097       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY908063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971324       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGAACAAAAAGGCGTTGACT  Raphanus sativus cv GSK3-1
EY908031       --> AGCAAATGAGTCGTTTGCGTATTGCGACGTTGA-CAAAA-GGCGTTGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               801    -    851
UN17638        --> TTAAATTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAGTTTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- TTAAATTTTCATTT-CTATCAATTTGCGTATGATTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. maritimus
EX900800       <-- TTAAATTTTCATTT-CTATCAGTT-GCGTAT-----------GTTTGTTA  Raphanus sativus cv Early Scarlet Globe
EV547477       <-- TTAAATTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720029       <-- ..................................................  Raphanus sativus var. oleiformis
EW730836       <-- TTAAATTTTCATTT-CTATCAGTT-GCGTAT-----------GTTTGTTA  Raphanus sativus cv Early Scarlet Globe
FD961031       <-- TTAAATTTTCATTT-CTATCAATTTGCGTATGATTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. maritimus
FD546966       <-- TTAAATTTTCATTT-CTATCAATTTGCGTATGATTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769052       <-- TTAAATTTTCATTT-CTATCAATTTGCGTATGATTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553281       <-- TTAAATTTTCATTTTTTATCAATT-GCGTATGTTTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. landra
EY926953       <-- TTAAATTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAGTTTCTTTG  Raphanus sativus var. oleiformis
EX767054       <-- .....................................tttttttgttaaa  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562512       --> ..................................................  Raphanus sativus var. oleiformis
EV552589       --> TTAAATTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAGTTTCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755318       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905493       --> TTAAATTTTCATTT-CTATCAGTT-GCGTATGTTTGTTAAAcaagcttac  Raphanus sativus cv Rat-Tail Radish #3870
EY929858       --> ..................................................  Raphanus sativus var. oleiformis
EY930868       --> ..................................................  Raphanus sativus var. oleiformis
FD563148       --> ..................................................  Raphanus sativus var. oleiformis
FD579420       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD941172       --> ..................................................  Raphanus sativus var. oleiformis
FD965232       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972110       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535913       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV527328       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX762879       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD563413       --> ..................................................  Raphanus sativus var. oleiformis
FD532384       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX896955       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD551097       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725557       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY908063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557096       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971324       --> TTAAATTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAacaagctta  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441987       --> TTAAATTTTCATTT-CTATCAGTT-GCGTATGTTTGTTAAA---------  Raphanus sativus cv GSK3-1
EY908031       --> TTAA-TTTTCATTT-CTATCAATT-GCGTATGTTTGTTAAAcaagcttac  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949141       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715425       --> ..................................................  Raphanus sativus var. oleiformis

               851    -    901
UN17638        --> TTAAAA-CG-CT-TACTTCTTACTT------T-T---TCTT---TCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- TTAAAA-CG-CT-TACTTCTTAC...........................
EX900800       <-- AAACAA--G-CT-TACTTCTTACTT------T-T---TCTT---TCCTTT
EV547477       <-- TTAAAA-CG-CT-TACTTCTTACTTCTTACTTCT---TCTT---TCCTTT
EW720029       <-- ..................................................
EW730836       <-- AAACAA--G-CT-TACTTCTTACTT------T-T---TCTT---TCCTTT
FD961031       <-- TTAAAA-CG-CT-TACTTCTT.............................
FD546966       <-- TTAAAA-CG-CT-TACTTCTTACTTCTTACTTCT---TCTT---TCCTTT
EX769052       <-- TTAAAA-CG-CT-TACTTCTTACTT-----CT-TACTTCTTCCTTCCTTT
FD553281       <-- TTAAAA-CG-CT-TACTTCTTA............................
EY926953       <-- TTAAAA-CG-CT-TACTTCTTACTT------T-T---TCTT---TCCTTT
EX767054       <-- atgcttacttCT-TACTTCTTACTT------T-T---TCTT---TCCTTT
FD562512       --> ..................................................
EV552589       --> TTAAACGCTACTCTACTTCT-ACTT------C-T----CTT---TCCTTT
EX755318       --> ..................................................
EX905493       --> ttct..............................................
EY929858       --> ..................................................
EY930868       --> ..................................................
FD563148       --> ..................................................
FD579420       --> ..................................................
FD941172       --> ..................................................
FD965232       --> ..................................................
FD972110       --> ..................................................
FD535913       --> ..................................................
EV527328       --> ..................................................
EX762879       --> ..................................................
FD563413       --> ..................................................
FD532384       --> ..................................................
EX896955       --> ..................................................
FD551097       --> ..................................................
EW725557       --> ..................................................
EY908063       --> ..................................................
FD557096       --> ..................................................
FD971324       --> ctt...............................................
FY441987       --> --ACAA--G-CT-TACTTCTTACTT------T-T---TCTT---TCCTTT
EY908031       --> ttcttacttc........................................
FD949141       --> ..................................................
EW715425       --> ..................................................

               901    -    951
UN17638        --> GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ..................................................
EX900800       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
EV547477       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAACCACTCATATGGGAC
EW720029       <-- ..................................................
EW730836       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTC.........
FD961031       <-- ..................................................
FD546966       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
EX769052       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
FD553281       <-- ..................................................
EY926953       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGCCACTCATATGGGAC
EX767054       <-- GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
FD562512       --> ..................................................
EV552589       --> GTACCT............................................
EX755318       --> ..................................................
EX905493       --> ..................................................
EY929858       --> ..................................................
EY930868       --> ..................................................
FD563148       --> ..................................................
FD579420       --> ..................................................
FD941172       --> ..................................................
FD965232       --> ..................................................
FD972110       --> ..................................................
FD535913       --> ..................................................
EV527328       --> ..................................................
EX762879       --> ..................................................
FD563413       --> ..................................................
FD532384       --> ..................................................
EX896955       --> ..................................................
FD551097       --> ..................................................
EW725557       --> ..................................................
EY908063       --> ..................................................
FD557096       --> ..................................................
FD971324       --> ..................................................
FY441987       --> GTACCTTTATTTACATGTTTGTATGGTTATATAAGTCACTCATATGGGAC
EY908031       --> ..................................................
FD949141       --> ..................................................
EW715425       --> ..................................................

               951    -   1001
UN17638        --> CAAAAAGAACTACTAATCCCACGGTGGTGATGTGTTGTATGCTTTCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531470       <-- ..................................................
EX900800       <-- C.................................................
EV547477       <-- CAAAAAGAACTACT....................................
EW720029       <-- ..................................................
EW730836       <-- ..................................................
FD961031       <-- ..................................................
FD546966       <-- CAAAAAGAACTACTAATCCCACGGTAGTGATGTGTTGTATGCTTTCTAAA
EX769052       <-- CAAAAAGAACTACTAATCCCACGGTGGTGATGTGTTGTATGCCTTCTAAA
FD553281       <-- ..................................................
EY926953       <-- CAAAAAGAACTACTAATCCTACGGTGGTGATGTGTTATATGCTTTCTAAA
EX767054       <-- CAAAAA............................................
FD562512       --> ..................................................
EV552589       --> ..................................................
EX755318       --> ..................................................
EX905493       --> ..................................................
EY929858       --> ..................................................
EY930868       --> ..................................................
FD563148       --> ..................................................
FD579420       --> ..................................................
FD941172       --> ..................................................
FD965232       --> ..................................................
FD972110       --> ..................................................
FD535913       --> ..................................................
EV527328       --> ..................................................
EX762879       --> ..................................................
FD563413       --> ..................................................
FD532384       --> ..................................................
EX896955       --> ..................................................
FD551097       --> ..................................................
EW725557       --> ..................................................
EY908063       --> ..................................................
FD557096       --> ..................................................
FD971324       --> ..................................................
FY441987       --> C.................................................
EY908031       --> ..................................................
FD949141       --> ..................................................
EW715425       --> ..................................................

               1001   -   1051
UN17638        --> TTCTTACTACAGATTTG
                   ~~~~~~~~~~~~~~~~~
FD531470       <-- .................
EX900800       <-- .................
EV547477       <-- .................
EW720029       <-- .................
EW730836       <-- .................
FD961031       <-- .................
FD546966       <-- TTCTTACTACAGATTTG
EX769052       <-- TTCTTACTACAGATTcg
FD553281       <-- .................
EY926953       <-- TTCTTACCACAGAg...
EX767054       <-- .................
FD562512       --> .................
EV552589       --> .................
EX755318       --> .................
EX905493       --> .................
EY929858       --> .................
EY930868       --> .................
FD563148       --> .................
FD579420       --> .................
FD941172       --> .................
FD965232       --> .................
FD972110       --> .................
FD535913       --> .................
EV527328       --> .................
EX762879       --> .................
FD563413       --> .................
FD532384       --> .................
EX896955       --> .................
FD551097       --> .................
EW725557       --> .................
EY908063       --> .................
FD557096       --> .................
FD971324       --> .................
FY441987       --> .................
EY908031       --> .................
FD949141       --> .................
EW715425       --> .................