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Alignment for radish unigene UN17640

               1      -     51
UN17640        --> GGAAAACAGCCTCAAAGGACATCGTGAAAAACAGAACACGATCGCTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> GGAAAACAGCCTCAAAGGACATCGTGAAAAACATAACACGATCGCTTTAA
FD971786       --> .GAAAACAGCCTCAAAGGACATCGTGAAAAACAGAACACGATCGCTTTAA
EV536789       --> .....ggAGCCTCAAAGGACATCGTGAAAAACAGAACACGATCGCTTTAA
EX772581       --> ..................ggATCGTGAAAAACATAACACGATCGCTTTAA
FD540020       --> .......................ggGAAAAACAGAACACGATCGCTTTAA
EX897091       --> ..............................ggAGAACACGATCGCTTTAA
EX896995       --> ..................................................
FD946328       --> ..................................................

               51     -    101
UN17640        --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACAGAAGCTAGAGATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACCGAAGCTAGAGATGGA
FD971786       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACAGAAGCTAGAGATGGA
EV536789       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACAGAAGCTAGAGATGGA
EX772581       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACCGAAGCTAGAGATGGA
FD540020       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACAGAAGCTAGAGATGGA
EX897091       --> GGCTCAAAGTCGAGTTCATCGAAAGTTTTCAGACAGAAGCTAGAGATGGA
EX896995       --> ..................................................
FD946328       --> ..................................................

               101    -    151
UN17640        --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
FD971786       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
EV536789       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
EX772581       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
FD540020       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
EX897091       --> AGTTTCCGGCGTCGTTCTCCGACAGATTCCGTGCGTCTCAAGCTCCGTCA
EX896995       --> ..................................................
FD946328       --> ..................................................

               151    -    201
UN17640        --> CCGATGGCCGTTACTCCGGTCTCCGATTTTCCGGCAACACGAGGACGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> CCGATGGCCGTTACTCCGGTCTCCGATTTTCCGGCAACACGAGGACGACG
FD971786       --> CCGATGGCCGTTACTCCCGTCTCCGATTTTCCGGCAACACG-GG--GACG
EV536789       --> CCGATTGCCGTTTCTCCGGTCTCCGATTTTCCGGCAACACGAGGACGACG
EX772581       --> CCGATGGCCGTTACTCCGGTCTCCGATTTTCCGGCAACACGAGGACGACG
FD540020       --> CCGATTGCCGTTTCTCCGGTCTCCGATTTTCCGGCAACACGAGGACGACG
EX897091       --> CCGATGGCCGTTACTCCGGTCTCCGATTTTCCAGCAACACGGGGACGACG
EX896995       --> ..................................................
FD946328       --> ..................................................

               201    -    251
UN17640        --> ACGGTCGGGTTTCGGACGAGGAGATTCAGAGGAATCACGTGTAATAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ACGGTCGGGTTTCGGACGAGGAGATTCAGAGGAATCACGTGTAATAACGA
FD971786       --> ACGGTCGGGTTTCGGACGAGGAGATTCAGAGGAATCACGTGTAATAACGA
EV536789       --> ACGGTCGGATTTCGGACGAGGAGATTCAGAGGAATCGTGTGTGATAACGA
EX772581       --> ACGGTCGGGTTTCGGACGAGGAGATTCAGAGGAATCACGTGTAATAACGA
FD540020       --> ACGGTCGGATTTCGGACGAGGAGATTCAGAGGAATCA-TTGTGATAACGA
EX897091       --> ACGGTCGGGTTTCGGACGAGGAGATTCAGAGGGATCACGTGTAATAACGA
EX896995       --> ..................................................
FD946328       --> ..................................................

               251    -    301
UN17640        --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGACGACGACGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGATGACGACGA---
FD971786       --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGACGACGACGACGA
EV536789       --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGACGACGACGACGA
EX772581       --> GTTTTCCG-TAAAGGGCACATGA-TTACTATTCTGGGtgacgac......
FD540020       --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGACGACGACGACGA
EX897091       --> GTTTTCCGATAAAGGGCACATGAGTTACTATTCTGGGACGACGACGACGA
EX896995       --> ..................................................
FD946328       --> ..................................................

               301    -    351
UN17640        --> ---GATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTATGGAGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ---GATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTATGG........
FD971786       --> CGAGATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTGTGGAGAAGGAG
EV536789       --> ---GATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTATGGAGAAGGAG
EX772581       --> ..................................................
FD540020       --> ---GATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTATGGAGAAGGAG
EX897091       --> CGAGATGCGGCGGTGAGGGGAAGGATAAGGTGAAGGTTATGGAGAAGGAG
EX896995       --> ...............AGGGGAAGGATAAGGTGAAGGTTATGGAGAAGGAG
FD946328       --> ..................................................

               351    -    401
UN17640        --> AAGAAGAAGGAGATGAAGAAGAAGGCTAAGGTTCTTAAAGCTCTTTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> AAGAAGAAGGAGATGAAGAAGAAGGCTAAGGTTCTTAAAGCTCTTTCTAA
EV536789       --> AAGAAGAAGGAGATGAAGAAGAAAGCTAAGGTTCTTAAAGCTCTTTCTAA
EX772581       --> ..................................................
FD540020       --> AAGAAGGAGGAGATGAAGAAGAAAGCTAAGGTTCTTAAAGCTCTTTCTAA
EX897091       --> AAGAAGAAGGAGATGAAGAAGAAGGCTAAGGTTCTTAAAGCTCTTTCCAA
EX896995       --> AAGAAGAAGGAGATGAAGAAGAAGGCTAAGGTTCTTAAAGCTCTTTCCAA
FD946328       --> ..................................................

               401    -    451
UN17640        --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCAGAGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCGGAAGCTG
EV536789       --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCAGAGGCCG
EX772581       --> ..................................................
FD540020       --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCAGAGGCCG
EX897091       --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCAGAGGCCG
EX896995       --> GAACTTGAATATGTTTTCAAGCATAGGGTTTGGTCTTGATCCAGAGGCCG
FD946328       --> ..................................................

               451    -    501
UN17640        --> GTTTGGTTGCTGAGATTCAAAACAAGACAATCTCGGAAGCAACGGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ........GCTGAGAT-C-AAACAAGACAATCTCGGAAGCAACGGAGATT
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> GTTTGGTCGCTGAGATTCAAAACAAGACAATCTCGGAAGCAACGGAGATT
EV536789       --> GTTTGGTTGCTGAGATTCAGAACAAGACAATCTCGGAAGCAACGGAGATT
EX772581       --> ..................................................
FD540020       --> GTTTGGTTGCTGAGATTCGGAACAAGACAATCTCGGAAGCAACGGAGATT
EX897091       --> GTTTGGTTGCTGAGATTCAAAACAAGACAATCTCGGAAGCAACGGAGATT
EX896995       --> GTTTGGTTGCTGAGATTCAAAACAAGACAATCTCGGAAGCAACGGAGATT
FD946328       --> ..................................................

               501    -    551
UN17640        --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTGTTGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- CTGGTTAAGCAGCTGGATCAGT-GAAAGCAGAGGAGAAGCTATTGAAGAA  Raphanus sativus cv Early Scarlet Globe
EX900913       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942470       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX769915       --> ..................................................  Raphanus raphanistrum subsp. landra
FD971786       --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTGTTGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536789       --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTGTTGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772581       --> ..................................................  Raphanus raphanistrum subsp. landra
FD540020       --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTGTTGAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX897091       --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTATTGAAGAA  Raphanus sativus cv Early Scarlet Globe
EX896995       --> CTGGTTAAGCAGCTGGATCAGTTGAAAGCAGAGGAGAAGCTATTGAAGAA  Raphanus sativus cv Early Scarlet Globe
FD946328       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN17640        --> ACAGAGGAAAGAAGAAAAGGCAAAGGCTAAAGCTTTGAAGATGATGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ACAGAGGAAAGAAGAAAAGGCAAAGGCTAAAGCTTTGAAGATGATGACTG
EX900913       <-- ..................................................
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> ACAGAGGAAAGAGGAAAAGGCAAAGGCTAAAGCTTTGAAGATGATGACTG
EV536789       --> ACAGAGAAAAGAAGAAAAGGTAAAAGCTAAAGCTTTGAAGATGATGACTG
EX772581       --> ..................................................
FD540020       --> ACAGAGAAAAGAAGAAAAGGCAAAAGCTAAAGCTTTGAAGATGATGACTG
EX897091       --> ACAGAGGAAAGAAGAAAAAGCAAAGGCTAAAGCTTTGAAGATGATGACTG
EX896995       --> ACAGAGGAAAGAAGAAAAGGCAAAGGCTAAAGCTTTGAAGATGATGACTG
FD946328       --> ..................................................

               601    -    651
UN17640        --> AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCTAGTGACAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCTAGTGACAGTGAT
EX900913       <-- .........................TTCGTCTGAATCTAGTGACAGTGAT
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> AGGTGGACTCTGAATCATCTTCTTCTTCGTCTGAATCTAGTGACAGTGAT
EV536789       --> AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCAAGTGACAGTGAT
EX772581       --> ..................................................
FD540020       --> AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCAAGTGACAGTGAT
EX897091       --> AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCTAGTGACAGTGAT
EX896995       --> AGATGGACTCTGAATCTTCTTCTTCTTCGTCTGAATCTAGTGACAGTGAT
FD946328       --> ..................................................

               651    -    701
UN17640        --> TGTGGCAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAACAAGGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TGTGGCAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAACAAGGCGAT
EX900913       <-- TGTGGCAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAACAAGGCGAT
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> TGTGGC............................................
EV536789       --> TGTGGGAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAA.........
EX772581       --> ..................................................
FD540020       --> TGTGGGAAAGGGAAAATTGTTGACATGAGCTCTTTCAGAAA.........
EX897091       --> TGTGGCAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAACA-GGCGAT
EX896995       --> TGTGGCAAAGGGAAAGTTGTTGACATGAGCTCTTTCAGAAACAAGGCGAT
FD946328       --> ..................................................

               701    -    751
UN17640        --> TCTCGAGCCGTTACGACCAGAGTCTGGAGTAGCAACCCTTCCTAGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TCTCGAGCCGTTACGACCAGAGTCTGGAGTAGCAACCCTTCCTAGAATCC
EX900913       <-- TCTCGAGCCGTTACGACCAGAGTCTGGAGTAGCAACCCTTCCTAGAATCC
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> TCTCGAGCCGTTACGACCAGAGTCTGGAGTAGCAACCCTTCCTAGAATCC
EX896995       --> TCTCGAGCCGTTACGACCAGAGTCTGGAGTAGCAACCCTTCCTAGAATCC
FD946328       --> ..................AGAGTCTGGAGTAACAACCCTTCCTAGAATCC

               751    -    801
UN17640        --> AAGAAGATTCTTGCAAGAACACAGGTGAAGCATTGAAGCTCGCTCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- AAGAAGATTCTTGCAAGAACACAGGTGAAGCATTGAAGCTCGCTCTGCTG
EX900913       <-- AAGAAGATTCTTGCAAGAACACAGGTGAAGCATTGAAGCTCGCTCTGCTG
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> AAGA-GATTCTTGCAAGAACACAG-TGAAGCATTGAAGCTCGCTCTGCTG
EX896995       --> AAGAAGATTCTTGCAAGAACACAGGTGAAGCATTGAAGCTCGCTCTGCTG
FD946328       --> AAGAAGATTCTTGCAAGAACACAGGTGAAGCATTGAAGCTCACTCTGCTG

               801    -    851
UN17640        --> CAATCAGCTGCTGCGTCCACAGCTTTTCCCTCAGTTGTTAATCCTGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- CAATCAGCTGCTGCGTCCACAGCTTTTCCCTCAGTTGTTAATCCTGGATT
EX900913       <-- CAATCAACTGCTGCGTCCACAGCTTTTCCCTCAGTTGTTAATCCTGGATT
FD942470       <-- ..................................................
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> CA-TCAACTGCTG.....................................
EX896995       --> CAATCAGCTGCTGCGTCCACAGCTTTTCCCTCAGTTGTTAATCCTGGATT
FD946328       --> CAATCAGCTGCTGCGTCCACAGCTTTTCCCTCAGTTGTTAATCCTGGATT

               851    -    901
UN17640        --> GCCATTGAAGACGGTGGAAGCAGTTCCGGTTGTTGGATTGCTGTCGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- GCCATTGAAGACGGTGGAAGCAGTTCCGGTTGTTGGATTGCTGTCGAAGA
EX900913       <-- GCCATTGAAGACGGTGGAAGCAGTTCCGGTTGTTGGATTGCCGTCGAAGA
FD942470       <-- .................................................A
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> GCCATTGAAGACGGTGGAAGCAGTTCCGGTTGTTGGATTGCTGTCGAAGA
FD946328       --> GCCATTGAAGACGGTGGAAGCAGTTCC.......................

               901    -    951
UN17640        --> GAATAGAAGTCTGTATGGGAGGAAAGTGCAAGAAATCAGGAGGAGCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- GAATAGAAGTCTGTATGGGAGGAAAGTGCAAGAAATCAGGAGGAGCTGTA
EX900913       <-- GAATAGAAGTCTGTATGGGAGGAAAGTGCAAGAAATCAGGAGGAGCTGTA
FD942470       <-- GAATAGAAGTCTGTATGGGAGGAAAGTGCAAGAAATCAGGAGGAGCTGTA
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> GAATAGAAGTCTGTATGGGAGGAAAGTGCAAGAAA...............
FD946328       --> ..................................................

               951    -   1001
UN17640        --> CTGTTAGATGAGTTTCAGAAGGCGATGACGGGCATGGAAGGATTTGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- CTGTTAGATGAGTTTCAGAAGGCGATGACGGGCATGGAAGGATTTGCTGT
EX900913       <-- CTGTTAGATGAGTTTCAGAAGGCGATGACGGGCATGGAAGGATTTGTTGT
FD942470       <-- CTGTTAGATGAGTTTCAGAAGGCGATGACGGGCATGGAAGGATTTGCTGT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1001   -   1051
UN17640        --> GGCATGCAAGTGCATGGGGAAGTGTAGAGATGGTCCAAACGTTAGAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- GGCATGCAAGTGCATGGGGAAGTGTAGAGATGGTCCAAACGTTAGAGTGG
EX900913       <-- GGCATGCAAGTGCATGGGGAAGTGTAGAGATGGTCCAAACGTTAGAGTGG
FD942470       <-- GGCATGCAAGTGCATGGGGAAGTGTAGAGATGGTCCAAACGTTAGAGTGG
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1051   -   1101
UN17640        --> TGAACGAGACCGATGCTGTGATGACTGATTCGGTTAGAACACCTTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TGAACGAGACCGATGCTGTGATGACTGATTCGGTTAGAACACCTTCCAAG
EX900913       <-- TGAACGAGACCGATGCTGTGATGACTGATTCGGTTAGAACACCTTCCAAG
FD942470       <-- TGAACGAGACCGATGCTGTGATGACTGATTCGGTTAGAACCCCTTCCAAG
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1101   -   1151
UN17640        --> ACCGTTTGTGTAGGAGTTGGGTTGCAGGATGTGGAAACTATTGTCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ACCGTTTGTGTAGGAGTTGGGTTGCAGGATGTGGAAACTATTGTCACAAG
EX900913       <-- ACCGTTTGTGTAGGAGTTGGGTTGCAGGATGTGGAAACTATTGTCACAAG
FD942470       <-- ACCGTTTGTGTAGGAGTTGGGTTGCAGGATGTGGAAACTATTGTCACAAG
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1151   -   1201
UN17640        --> TTTTTTTGGTGAATAATGCAGGAGAGAAGGTTTTGGATCATGCCTCGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TTTTTTTGGTGAATAATGCAGGAGAGAAGGTTTTGGATCATGCCTCGTAT
EX900913       <-- TTTTTTTGGTGAATAATGCAGGAGAGAAGGTTTTGGATCATGCCTCGTAT
FD942470       <-- TTTTTTTGGTGAATAATGCAGGAGAGAAGGTTTTGGATCATGCCTCGTAT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1201   -   1251
UN17640        --> GGAAAGTGTTTAAACATGATCAAATTGATATAATGCATAGTGTGGTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- GGAAAGTGTTTAAACATGATCAAATTGATATAATGCATAGTGTGGTGTTC
EX900913       <-- GGAAAGTGTTTAAACATGATCAAATTGATATAATGCATAGTGTGGTGTTC
FD942470       <-- GGAAAGTGTTTAAACATGGTCAAATTGATATAATGCATAGTGTGGTGTTT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1251   -   1301
UN17640        --> TTTTTCTCATTGTACATAAATGTCTTCGTGTGCATTTTCGAGTGGAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TTTTTCTCATTGTACATAAATGTCTTCGTGTGCATTTTCGAGTGGAACAT
EX900913       <-- TTTTTCTCATTGTACATAAATGTCTTCGTGTGCATTTTCGAGTGGAACAT
FD942470       <-- TTTTTCTCATTGTACATAAATGTTTTCGTGTGCATTTTCGAGTGGAACAT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1301   -   1351
UN17640        --> TGGTAATATAAACATCTTTTCTGTACTTTGGTCTTGTAATGAAACCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- TGGTAATATAAACATCTTTTCTac..........................
EX900913       <-- TGGTAATATAAACATCTTTTCTGT..........................
FD942470       <-- TGGTAATATAAACATTTTTTTTGTACTTTGGTCTTGTAATGAAACCTATG
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1351   -   1401
UN17640        --> TTGCATAAGGCTAACGATCCAATATTGTACTGGATTGTACAACTAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- TTGCATAAGGCTAACGATCCAATATTGTACTGGATTGTACAACTAGTGAT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1401   -   1451
UN17640        --> CATTTGTTTGCATGCACTTAACTACATAATGGTCCTAACGATCATGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- ..................................................
EX900913       <-- ..................................................
FD942470       <-- CATTTGTTTGCATGCACTTAACTACATAATGGTCCTAACGATCATGTGTT
EX769915       --> ..................................................
FD971786       --> ..................................................
EV536789       --> ..................................................
EX772581       --> ..................................................
FD540020       --> ..................................................
EX897091       --> ..................................................
EX896995       --> ..................................................
FD946328       --> ..................................................

               1451   -   1501
UN17640        --> GCTGCAAGCAACGAAAATACAGATGGGATTTCAATTTTTTGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900827       <-- .............................................
EX900913       <-- .............................................
FD942470       <-- GCTGCAAGCAACGAAAATACAGATGGGATTTCAATTTTTTGTGCT
EX769915       --> .............................................
FD971786       --> .............................................
EV536789       --> .............................................
EX772581       --> .............................................
FD540020       --> .............................................
EX897091       --> .............................................
EX896995       --> .............................................
FD946328       --> .............................................