RadishBase

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Alignment for radish unigene UN17641

               1      -     51
UN17641        --> CGGTATTAATATGATTTTATCTAGTTGATAAAACATTTTTATGGCTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ......................AGTTGATAAAACATTTTTATGGCTCAAA  Raphanus raphanistrum subsp. maritimus
EV527886       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535430       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD578094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..................................................  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> CGGTATTAATATGATTTTATCTAGTTGATAAAACATTTTTATGGCTCAAA  Raphanus raphanistrum subsp. landra
EW730499       --> ......................gGTTGATAAAACATTTTTATGGCTCAAT  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ...................................TTTTTATGGCTCAAT  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ..........................................GGCTCAAA  Raphanus raphanistrum subsp. maritimus
FD537574       --> ..........................................GGCTCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ..........................................GGCTCAAT  Raphanus sativus cv Early Scarlet Globe
EV532011       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN17641        --> ATTACAATTTGTGTCTTACTTTGTTACAAAATATCATCACACCGCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ATTACAATTTGCGTCTTACTTTGTTACAAAATATCAGCACACCGCAGAAA  Raphanus raphanistrum subsp. maritimus
EV527886       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535430       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD578094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..................................................  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> ATTACAATTTGCGTCTTACTTTGTTACAAAATATCAGCACACCGCAAAAA  Raphanus raphanistrum subsp. landra
EW730499       --> ATTACAATTTGTGTCTTACTTTGTTACAAAATATCATCACACCGCAGAAA  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ATTACAATTTGTGTCTTACTTTGTTACAAAATATCATCACACCGCAGAAA  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ATTACAATTTGCGTCTTACTTTGTTACAAAATATCATCACACCGCGGAAA  Raphanus raphanistrum subsp. maritimus
FD537574       --> ATTACAATTTGGGTCTTACTTTGTTACAAAATATCATCACACCGCAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ATTACAACTTGTGTCTTACTTTGTTACAAAATATCATCACACCGCAAAAA  Raphanus sativus cv Early Scarlet Globe
EV532011       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN17641        --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAAATT  Raphanus raphanistrum subsp. maritimus
EV527886       <-- ................acagTACAAACACATACTTGGCG-TCATAAAAT-  Raphanus raphanistrum subsp. maritimus
FD535430       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD578094       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..................................................  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAAATT  Raphanus raphanistrum subsp. landra
EW730499       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAA-TT  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAA-TT  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAAATT  Raphanus raphanistrum subsp. maritimus
FD537574       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGCGGTCATAAAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ACACCACCATTGTTACAAGTTACAAACACATACTTGGGGGTCATAAA-TT  Raphanus sativus cv Early Scarlet Globe
EV532011       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN17641        --> GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAGAGGCTGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAGAGGCTGCAAA
EV527886       <-- GTATACATAAAACAGAGTACAAC-ACTACTACAGAAGA-GAGGCTGCAAA
FD535430       <-- .............AGAGTACAACAACTACTACAGAAGAAGAGGCTGCAAA
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- ..................................................
FD986069       --> GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAGAGGCTGCAAA
EW730499       --> GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAGAGGCTGCAAA
EY934018       --> GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAAAGGCTGCAAA
FD531092       --> GTATACATAAAACAGAGTACAACAACTACTACAGAAGAAGAGGCTGCAAA
FD537574       --> GTATACATAAAACAGAGTACAACTACTAC---AGAAGAAGAGGCTGCAAA
FD943320       --> GTATACATAAAACAGAGTACAACTACTACTACAGGAGAAGAGGCTGCAAA
EV532011       --> ..................................................

               201    -    251
UN17641        --> GTGAGAGAGGTTTGTTCATGTTGTTCTGTTTCCCCCCTTGTTGTGCTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- GTGAGAGAGGTTTGTTCATGTTGTTCTGTTTCCCCCCTTGTTGTGCTAGC
EV527886       <-- GTGAGAGAGGTTTGCTCATGTTGTTCTGTTTCCCCCCTTGCTGTGCTAGC
FD535430       <-- GTGAGAGAGGTTTGCTCATGTTGTTCTGTTTCCCCCCTTGCTGTGCTAGC
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- ..................................................
FD986069       --> GTGAGAGAGGTTTGTTCATGTTGCTCTATTTCCCCCCTTGTTGTGCTAGC
EW730499       --> GTGAGAGAGGTTTGTTCATGTTGTTCTGTTTCCCCCCTTGTTGTGCTAGC
EY934018       --> GTGAGAAAGGTTTGTTCATGTTGTTCTGTTTCCCCCCTTGTTGTGCTAAC
FD531092       --> GTGAGAGAGGTTTGCTCATGTTGTTCTGTTTCCCCCCTTGCTGTGCTAGC
FD537574       --> GTGAGAGAGGTTTGTTCATGTTGTTCTGTTTCCCCTCTTGCTGTGCTAGC
FD943320       --> GTGAGAGAGGTTTGTTCATGTTGTTCTGTTTCCCCCCTTGTTGTGCTAGC
EV532011       --> ...............................................AGC

               251    -    301
UN17641        --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
EV527886       <-- TTTGGTGGTTATGTGGTCATGGACGATCAAGAGCTTGAGTGTGGCTGATT
FD535430       <-- TTTGGTGGTTATGTGGTCATGGACGATCAAGAGCTTGAGTGTGGCTGATT
FD578094       <-- ........TTATGTG-TCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- ..................................................
FD986069       --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
EW730499       --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
EY934018       --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAACTTGAGTGTGGCTGA..
FD531092       --> TTTGGTGGTTATGTGGTCATGGACGATCAAGAGCTTGAGTGTGGCTGATT
FD537574       --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
FD943320       --> TTTGGTGGTTATGTGGTCATGGACTATCAAGAGCTTGAGTGTGGCTGATT
EV532011       --> TTTGGGGGTTATGTGGTCATGGACGATCAAGAGCTTGAGTGGGGCTGATT

               301    -    351
UN17641        --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- CACGCAGCCAAGTTGCTACGACCGAACCGCTTGATGTGAACCTTCC-ATG
EV527886       <-- CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG
FD535430       <-- CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG
FD578094       <-- CACGCAGCCAAGTTGCTACCACCGAACCGCTTGACGTGAACCGTCCCATG
EW726319       <-- ......................................gACCGTCCCATG
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- ..................................................
FD986069       --> CACGCAGCCAAGTTGCTACGACCGAACCGCTTGATGTGAACCTTCCCATG
EW730499       --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGACGTGAACCGTCCCATG
EY934018       --> ..................................................
FD531092       --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG
FD537574       --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG
FD943320       --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGACGTGAACCGTCCCATG
EV532011       --> CACGCAGCCAAGTTGCTACCACCGAACCGCTTGATGTGAACCGTCCCATG

               351    -    401
UN17641        --> TTGCATTTTGAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- TTGCATTTTGAGAGGTAGAACGGTGCGTCC-TTCCCCTCAAAAGCGCTT.  Raphanus raphanistrum subsp. maritimus
EV527886       <-- TTGCATTTTGAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCCTC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- TTGCATTT-GAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCCTC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- TTGCATTTTGAGAGGTAGAACGGTGCATCCATTCCCCTCAAAAGCGCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- TTGCATTT-GAGAG-TAGAACGGTGCATCCA--TCCCTCAAAAGCGCT-C  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..................................................  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> TTGCATTTTGAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCTTC  Raphanus raphanistrum subsp. landra
EW730499       --> TTGCATTTTGAGAGGTAGAACGGTGCATCCATTCCCCTCAAAAGCGCTTC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> TTGCATTTTGAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCCTC  Raphanus raphanistrum subsp. maritimus
FD537574       --> TTGCATTTTGGGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> TTGCATTTTGAGAGGTAAAACGGTGCATCCATTCCCCTCAAAAGCGCTTC  Raphanus sativus cv Early Scarlet Globe
EV532011       --> TTGCATTTTGAGAGGTAGAACGGTGCGTCCATTCCCCTCAAAAGCGCCTC  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN17641        --> AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV527886       <-- AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- AACCGCTGGCCTTAGTGCAGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- AACCGCTGG--CTAGTGCAGCGTCTCCAACCACTTTGCTGTGTT-CCCCC  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- .............AGTGCAGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ..................................TTGCTGTGTT-CCCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..................................................  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. landra
EW730499       --> AACCGCTGGC--TAGTGCAGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. maritimus
FD537574       --> AACAGCTGGCCTTAGTGCTGCATCTCCAACTACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> AACCGCTGGCCTTAGTGCAGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus sativus cv Early Scarlet Globe
EV532011       --> AACCGCTGGCCTTAGTGCCGCGTCTCCAACCACTTTGCTGTGTTTCCCCC  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN17641        --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- AACCAGTCAATATGCTCAAAAGGTTAGGTAACTCATGACCTTCATAGACA
FD535430       <-- AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCACGACCTTCATAGACA
FD578094       <-- AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EW726319       <-- AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EY937766       <-- AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
FD541251       <-- AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EW717698       <-- ..................................................
FD947356       <-- ..................................................
FD986069       --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EW730499       --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EY934018       --> ..................................................
FD531092       --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCACGACCTTCATAGACA
FD537574       --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
FD943320       --> AACCAGTCAATATGCTCAAAAGTTTAGGTAACTCATGACCTTCATAGACA
EV532011       --> AACCAGTCAATATGCTCAAAAGGTTAGGTAACTCATGACCTTCATAGACA

               501    -    551
UN17641        --> ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV527886       <-- ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCTCGTGCAGCGCC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- ATGGGGCGTATGTTTAGCAACCAAGCATGGACCATCGCTCGTGCAGCGCC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- ATGGACCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- ATGGACCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- ATGGACCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- ..gggGCGTATGTT-AGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus raphanistrum subsp. landra
EW730499       --> ATGGACCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ATGGGGCGTATGTTTAGCAACCAAGCATGGACCATCGCTCGTGCAGCGCC  Raphanus raphanistrum subsp. maritimus
FD537574       --> ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ATGGACCGTATGTTTAGCAACCAAGCATGGACCATCGCACGTGCAGCGCC  Raphanus sativus cv Early Scarlet Globe
EV532011       --> ATGGAGCGTATGTTTAGCAACCAAGCATGGACCATCGCTCGTGCAGCGCC  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN17641        --> AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACATTCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV527886       <-- AGAAGACATAGGGTGCAAGTCCAAGCAAGACTCAGACCAAACGTTCTCCC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACGTTCTCCC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACATTCTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACATTCTCCC  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACATTCTCCC  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCGGACCAAACATTCTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACGTTCTCCC  Raphanus sativus var. oleiformis
FD947356       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD986069       --> AGAAAACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACGTTCTCCC  Raphanus raphanistrum subsp. landra
EW730499       --> AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCAGACCAAACATTCTCCC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> AGAAGACATAAGGTGCAAGTCCAAGCAAGACTC.................  Raphanus raphanistrum subsp. maritimus
FD537574       --> AGAAGACATAAGGTGCAAGTCCAAGCAAGACTCGGACCAAACATTCTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> AGAAGACAT.........................................  Raphanus sativus cv Early Scarlet Globe
EV532011       --> AGAAGACATAGGGTGCAAGTCCAAGCAAGACTCAGACCAAACGTTCTCCC  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN17641        --> AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV527886       <-- AAACTTGCCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTAC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- AAACTTGCCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- AAACTTGCCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus sativus var. oleiformis
FD947356       <-- ..aacTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTT-C  Raphanus sativus cv Early Scarlet Globe
FD986069       --> AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus raphanistrum subsp. landra
EW730499       --> AAACTTGTCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD537574       --> AAACTTGCCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV532011       --> AAACTTGCCTAGATCTTCCCTCAAGCGCCACCAGTTGCGCTCCTCGTTAC  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN17641        --> TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD535430       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD578094       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
EW726319       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
EY937766       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD541251       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
EW717698       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD947356       <-- TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD986069       --> TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
EW730499       --> TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> TGACCAAAGTGCCAGAGCATGTCTGTAAGAGCATTGTAGAAGGCAGCAGC
FD943320       --> ..................................................
EV532011       --> TGACCAAAGTGCCAGA..................................

               701    -    751
UN17641        --> AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
FD535430       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCCGGA
FD578094       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
EW726319       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
EY937766       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
FD541251       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAACTCTGAGCCTGGA
EW717698       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
FD947356       <-- AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
FD986069       --> AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
EW730499       --> AGTGGAACCATCCATTTCGTTTACTTTGTCGAATAAGCTCTGAGCCTGGA
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> AGTGGAACCATCCATTTCGTTTA...........................
FD943320       --> ..................................................
EV532011       --> ..................................................

               751    -    801
UN17641        --> GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV527886       <-- GCCACACATTCTCTCTGTGGCCCTTGAGAAGTCCATGAACAACCCCATAC  Raphanus raphanistrum subsp. maritimus
FD535430       <-- GCCACACATTCTCTCTGTGGCCCTTGAGAAGTCCATGTACAACCCCATAC  Raphanus raphanistrum subsp. maritimus
FD578094       <-- GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus sativus cv Rat-Tail Radish #3870
EW726319       <-- GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus sativus cv Early Scarlet Globe
EY937766       <-- GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus sativus cv Early Scarlet Globe
FD541251       <-- GCCACACATTCTCTCTGTGGCCCTTGAGAAGTCCATGAACAACCCCATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717698       <-- GCCACACATTCTCTCTGTGGCCCTTGAGAAGTCCATGAACAACCCCATAC  Raphanus sativus var. oleiformis
FD947356       <-- GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus sativus cv Early Scarlet Globe
FD986069       --> GCCACACATTCTCCCTGTGGCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus raphanistrum subsp. landra
EW730499       --> GCCACACATTCTCTCTGTGTCCCTTGAGAAGTCCATGAACCACACCATAC  Raphanus sativus cv Early Scarlet Globe
EY934018       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD531092       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD537574       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD943320       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV532011       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN17641        --> ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
FD535430       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
FD578094       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
EW726319       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
EY937766       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
FD541251       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
EW717698       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
FD947356       <-- ACCTGATTATCAAACAGCCTGAGCTCCTCTAGCAGCACCGATGCATCTTC
FD986069       --> ACCTGAT-ATCAAA....................................
EW730499       --> ACCTGATTATCAA-CAGCCTGAGCTC-TCTAGCAG...............
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               851    -    901
UN17641        --> AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
FD535430       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
FD578094       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
EW726319       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
EY937766       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
FD541251       <-- AAATGAGTTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
EW717698       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
FD947356       <-- AAATGAATTGCACCGACTGCAAGCATTCAGAATGGCAGAGAAGGTAACAA
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               901    -    951
UN17641        --> CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATAACTTCCAATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATGACTTCCAATATA
FD535430       <-- CATTCGGTTTTATTTCCAGCTGc...........................
FD578094       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATAACTTCCAATATA
EW726319       <-- CATTCGGTTTTATTTCCAGCTGATCCATCTTGCGGATAACTTCCAATATA
EY937766       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATAACTTCCAATATA
FD541251       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATAACCTCCAATATA
EW717698       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATGACTTCCAATATA
FD947356       <-- CATTCGGTTTTATTTCCAGCTGATGCATCTTGCGGATAACTTCCAATATA
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               951    -   1001
UN17641        --> GAGGACAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- GAGGAGAGCTCATGCc..................................
FD535430       <-- ..................................................
FD578094       <-- GAGGACAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
EW726319       <-- GAGGACAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
EY937766       <-- GAGGACAGCTCATGCATACCCTCCTCCTCACAATCTTTCTCCCCTCTGTT
FD541251       <-- GAAGAGAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
EW717698       <-- GAGGAGAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
FD947356       <-- GAGGACAGCTCATGCATACCCTCCTCCTCACAATCTTTCTTCCCTCTGTT
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1001   -   1051
UN17641        --> ACTACTCTCGACCGTTAACTTCCCAAATATCTGCATCACCTGATTATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ACTACTCTCGACCGTTAACTTCC...........................
EW726319       <-- ACTACTCTCGACCGTTAACTTCCCAAATATCTGCATCACCTGATTATCCT
EY937766       <-- ACTACTCTCGACCGTTAACTTCCCAAATATCc..................
FD541251       <-- ACTACTCTCGACCGTTAACTTCCCAAATATCTGCATCACCTGATTATCCT
EW717698       <-- ACTACTCTCGACCGTTAACTTCCCAAATATCTGCATCACCTGATTATCCT
FD947356       <-- ACTACTCTCGACCGTTAACTTCCCAAATATCTGCATCACCTGATTATCCT
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1051   -   1101
UN17641        --> CTGTTTCAGTCAGTTTACTTAG--AGA-GAAGAAGGCAAAGAGGATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ..................................................
EW726319       <-- CTGTTTCAGTCAGTTTACTTAG--AG---AAGAAGGCAc...........
EY937766       <-- ..................................................
FD541251       <-- CTGTCTCAGTCAGTTTACTTAG--AGAAGAAGAAGGCAAAGAGGATCCAA
EW717698       <-- CTGTTTCAGTCAGTTTA-TTAGTTAGA-GAAGAAGGCAAAGAGGATCCAA
FD947356       <-- CTGTTTCAGTCAGTTTACTTAG--AGAAGAAGAAGGCAAAGAGGATCCAA
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1101   -   1151
UN17641        --> CTCCACCATCTCCAGACTCAGCCAAGCACTCTACCGTCGCAGAACGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- CTCCACCATCTCCAGACTCc..............................
EW717698       <-- CTCCACCGTCTCCAGACTCAGCCAAGCACTC...................
FD947356       <-- CTCCACCATCTCCAGACTCAGCCAAGCACTCTACCGTCGCAGAACGACCA
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1151   -   1201
UN17641        --> AAAGCATCGATTATAGAATTATAAGTCACAACGTTAGGACTAATCCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- AAAGCATCGATTATAGAATTATAAGTCACAACGTTAGGACTAATCCCTTC
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1201   -   1251
UN17641        --> CTTAGTCATCTCATCGATCAAAGAAACAGCAGAACCCACCAACCCGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- CTTAGTCATCTCATCGATCAAAGAAACAGCAGAACCCACCAACCCGTTCT
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1251   -   1301
UN17641        --> TACACAACGCATCGATCAACGCACTGTACAAAACAACATCAGCTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................................
EV527886       <-- ..................................................
FD535430       <-- ..................................................
FD578094       <-- ..................................................
EW726319       <-- ..................................................
EY937766       <-- ..................................................
FD541251       <-- ..................................................
EW717698       <-- ..................................................
FD947356       <-- TACACAACGCATCGATCAACGCACTGTACAAAACAACATCAGCTCTCAAC
FD986069       --> ..................................................
EW730499       --> ..................................................
EY934018       --> ..................................................
FD531092       --> ..................................................
FD537574       --> ..................................................
FD943320       --> ..................................................
EV532011       --> ..................................................

               1301   -   1351
UN17641        --> CCCGCCCCTTTGAACTCTTTAAATATCTCCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX750390       <-- ..................................
EV527886       <-- ..................................
FD535430       <-- ..................................
FD578094       <-- ..................................
EW726319       <-- ..................................
EY937766       <-- ..................................
FD541251       <-- ..................................
EW717698       <-- ..................................
FD947356       <-- CCCGCCCCTTTGAACTCTTTAAATATCTCCATCG
FD986069       --> ..................................
EW730499       --> ..................................
EY934018       --> ..................................
FD531092       --> ..................................
FD537574       --> ..................................
FD943320       --> ..................................
EV532011       --> ..................................