RadishBase

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Alignment for radish unigene UN17651

               -2     -     48
UN17651        --> ...ACTTGAATCTCAATTACAAATCAAAGATCAAGACAGCCTACTTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> gatACTTCAATCTCAATTACAAATCAAAGATCAAGACAGCCTACTTGTCG
EV547772       --> ......gGAATCTCAATTACAAATCAAAGATCAAGACAGCCTACTTGTCG
EV568822       --> ..............................ggAAGACAGCCTACTTGTCG
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               48     -     98
UN17651        --> GATAAGAAAAACAGAGGATTTTTGTTATCACTTTTTGTGTCGCCGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> GATAAGAAAAACAGAGGATTTTTGTTATCACTTTTTGTGTCGCCGGAGAT
EV547772       --> GATAAGAAAAACAGAGGATTTTTGTTATCACTTTTTGTGTCGCCGGAGAT
EV568822       --> GATAAGAAAAACAGAGGATTTTTGTTATCACTTTTTGTGTCGCCGGAGAT
EX770056       --> ..................TTTTTGTTATCACTTTTTGTGTCGCCGGAGAT
EY929416       --> ...............................gggagataaaaagactgtg
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               98     -    148
UN17651        --> AAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> AAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
EV547772       --> AAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
EV568822       --> AAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
EX770056       --> AAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
EY929416       --> tgggaaaaGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAG
FY450102       --> ............GCGAGTGTGCCGGAGATAA-GATAGTGAGGAGCGAGAG
EV528887       --> ..................ggGCCGGAGATAAAGATAGTGAGGAGCGAGAG
EX888150       --> ..............................AAGATAGTGAGGAGCGAGAG
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               148    -    198
UN17651        --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EV547772       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EV568822       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EX770056       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EY929416       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
FY450102       --> CTTAGGGCATCGAAGTGACGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EV528887       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
EX888150       --> CTTAGGGCATCGAAGTGAGGTGTCGAGCCCGGAAGCTAAGCTAGGGATGC
FY437345       --> ......................TCGAGCCCGGAAGCTAAGCTAGGGATGC
FY453429       --> ...........................................GGGATGC
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               198    -    248
UN17651        --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
EV547772       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
EV568822       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
EX770056       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
EY929416       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
FY450102       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCGCAGCTCAGCCCTAACGAG
EV528887       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAG
EX888150       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCCCAGCCCTAACGAG
FY437345       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCGCAGCTCAGCCCTAACGAG
FY453429       --> GTGTGGAAGATCTATGGGATGAGCAGAAACCGCAGCTCAGCCCTAACGAG
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               248    -    298
UN17651        --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
EV547772       --> AAGCTCAACGCATGTTTCGAGAGCATCCCCGTCTCTGCTTTCCCTCTCTC
EV568822       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
EX770056       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
EY929416       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
FY450102       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
EV528887       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
EX888150       --> AGGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
FY437345       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
FY453429       --> AAGCTCAACGCATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTC
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               298    -    348
UN17651        --> CTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCTTGGCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV532760       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX892144       <-- ..................................................  Raphanus sativus var. oleiformis
EV543587       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW729514       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892278       <-- ..................................................  Raphanus sativus var. oleiformis
EX772413       --> CTCTGATTCACAAGACATCGAGTTAAGATCAGACACAAGCTCGGCTGAAG  Raphanus raphanistrum subsp. landra
EV547772       --> CTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCTTGGCTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> CTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCTTGGCTGAAG  Raphanus raphanistrum subsp. landra
EX770056       --> CTCTGATTCACAAGACATCGAGTTAAGATCAGACACAAGCTTGGCTGAAG  Raphanus raphanistrum subsp. landra
EY929416       --> CTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCCTGGCTGAAG  Raphanus sativus var. oleiformis
FY450102       --> CTCTGATTCACAAGACATCGAGTTAAGATCAGACACAAGCTTGGCTGAAG  Raphanus sativus cv GSK3-1
EV528887       --> CTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCTTGGCTGAAG  Raphanus raphanistrum subsp. maritimus
EX888150       --> CTCTGATTCACAAGACATCGAGTTGAGATCATTCACAAGCTTGGCTGAAG  Raphanus sativus var. oleiformis
FY437345       --> CTCTGATTCACAAGACATCGAGTTAAGATCAGACACAAGCTTGGCTGAAG  Raphanus sativus cv GSK3-1
FY453429       --> CTCTGATTCACAAGACATCGAGTTAAGATCAGACACAAGCTTGGCTGAAG  Raphanus sativus cv GSK3-1
FY429792       --> ..................................................  Raphanus sativus cv GSK3-1
FD978584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888328       --> ..................................................  Raphanus sativus var. oleiformis

               348    -    398
UN17651        --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
EV547772       --> CTGTTGAGACACTGTCGAAACTCAAGGTGCTGAGCGCTCCTGTTGTAGAT
EV568822       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
EX770056       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
EY929416       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
FY450102       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
EV528887       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
EX888150       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
FY437345       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
FY453429       --> CTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGAT
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               398    -    448
UN17651        --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
EV547772       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATTGGTATTGT
EV568822       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
EX770056       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
EY929416       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
FY450102       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
EV528887       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
EX888150       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
FY437345       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
FY453429       --> GTTGACGCTCCTGAAGACGCCAGCTGGATTGACCGCTACATCGGTATTGT
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               448    -    498
UN17651        --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV532760       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX892144       <-- ..................................................  Raphanus sativus var. oleiformis
EV543587       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW729514       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- ..................................................  Raphanus sativus cv GSK3-1
EX892278       <-- ..................................................  Raphanus sativus var. oleiformis
EX772413       --> GGAGTTTCCAGGCATTGTTGTCTGGCTCTTGCATCAGTTGGACCCAACAT  Raphanus raphanistrum subsp. landra
EV547772       --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT  Raphanus raphanistrum subsp. landra
EX770056       --> GGAGTTTCCAGGCATTGTTGTCTGGCTCTTGCATCAGTTGGACCCAACAT  Raphanus raphanistrum subsp. landra
EY929416       --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT  Raphanus sativus var. oleiformis
FY450102       --> GGAGTTTCCAGGCATTGTTGTCTGGCTCTTGCATCAGTTGGACCCAACAT  Raphanus sativus cv GSK3-1
EV528887       --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT  Raphanus raphanistrum subsp. maritimus
EX888150       --> GGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACAT  Raphanus sativus var. oleiformis
FY437345       --> GGAGTTTCCAGGCATTGTTGTCTGGCTCTTGCATCAGTTGGACCCAACAT  Raphanus sativus cv GSK3-1
FY453429       --> GGAGTTTCCAGGCATTGTTGTCTGGCTCTTGCATCAGTTGGACCCAACAT  Raphanus sativus cv GSK3-1
FY429792       --> ..................................................  Raphanus sativus cv GSK3-1
FD978584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888328       --> ..................................................  Raphanus sativus var. oleiformis

               498    -    548
UN17651        --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> CTCCAAGGAGTCCT-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EV547772       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EV568822       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EX770056       --> CTCCAAGGAGTCCT-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EY929416       --> CTCCAAGGAGCCCT-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
FY450102       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EV528887       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
EX888150       --> CTCCAAGGAGCCCCTGCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
FY437345       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
FY453429       --> CTCCAAGGAGCCCC-GCTGTTGCAGGTTCAAATGGAGTTTCTCATGACTT
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               548    -    598
UN17651        --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> CACCGCCGATATCCTGGACAATGGAGATTCAGCTGTAACTTCTGGAAACT
EV547772       --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
EV568822       --> CACCGCCGATATCCTAGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
EX770056       --> CACCGCCGATATCCTGGACAATGGAGATTCAGCTGTAACTTCTGGAAACT
EY929416       --> CACCGCCGATATCCTGGATAACGGAGATTCAGCTGTAACTTCTGGAAACT
FY450102       --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
EV528887       --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
EX888150       --> CACCGCCGATATCCTGGATAACGGAGATTCAGCTGTAACTTCTGGAAACT
FY437345       --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
FY453429       --> CACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACT
FY429792       --> ...............GGATA-TGGAGATTCAGCTGTAACTTCTGGAAACT
FD978584       --> ................GATAACGGAGATTCAGCTGTAACTTCTGGAAACT
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> ..................................................

               598    -    648
UN17651        --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> TCTT..............................................
EV547772       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EV568822       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EX770056       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EY929416       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAAGTTCGA
FY450102       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EV528887       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EX888150       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCA........
FY437345       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
FY453429       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
FY429792       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
FD978584       --> TCTTTGAGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EV538087       --> ............TTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGA
EX747324       --> ..................................................
EX888328       --> ..................................................

               648    -    698
UN17651        --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ..................................................
EV532760       <-- ..................................................
EX892144       <-- ..................................................
EV543587       <-- ..................................................
EX776367       <-- ..................................................
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> ..................................................
EV547772       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EV568822       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EX770056       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EY929416       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
FY450102       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EV528887       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EX888150       --> ..................................................
FY437345       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
FY453429       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
FY429792       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
FD978584       --> GATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTGCAGAAAGA
EV538087       --> GATATCTCCGGAACATTCAGATGGGCACCTTTCCTAGCTCTGCAGAAAGA
EX747324       --> ..................................................
EX888328       --> ..................................................

               698    -    748
UN17651        --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ...........................TCTTTCCAAGCACAAAATGAAGA
EV532760       <-- .................................CAAGTACAAAATGAAGA
EX892144       <-- ..................................AAGTACAAAATGAAGA
EV543587       <-- ..........................................AATGAAGA
EX776367       <-- ................................................GA
EV542178       <-- ..................................................
EV573463       <-- ..................................................
EW729514       <-- ..................................................
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> ..................................................
EV547772       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
EV568822       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
EX770056       --> GAACTCCTTTTTAACCATGTTGTTGCTTCTTTCCAAGCACAAAATGAAGA
EY929416       --> GAACTCCTTTTTAACCATGCTGTTACTTC.....................
FY450102       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
EV528887       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
EX888150       --> ..................................................
FY437345       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
FY453429       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
FY429792       --> GAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
FD978584       --> GAACTCCTTCTTAACCATGTTGTTGCTTCTTTCCAAGTACAAAATGAAGA
EV538087       --> GAACTCCTTTTTAACCATGTTGTTGCTTCTTTCCAAGTACAAAATGAAGA
EX747324       --> .......TTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGA
EX888328       --> ..................................................

               748    -    798
UN17651        --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- GCATCCCAGTGGTTGATTTAGGGGAAGCAAAGATTGAGAACATAATCACA
EV532760       <-- GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX892144       <-- GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EV543587       <-- GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX776367       <-- GCATCCCAGTGGT-GATTTAGGGGAAGCAAAGATTGAGAACATAATCACA
EV542178       <-- .....................GGGAAGCAAAGATTGAGAACATAATCACA
EV573463       <-- .......................GAAGCAAAGATTGAGAACATAATCACA
EW729514       <-- ..........................GCAAAGATTGAGAACATAATCACA
FY430921       <-- ..................................................
EX892278       <-- ..................................................
EX772413       --> ..................................................
EV547772       --> GCATCCCAGTGGTTGAT.................................
EV568822       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX770056       --> GCATCCCAGTGGTTGAT.................................
EY929416       --> ..................................................
FY450102       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EV528887       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX888150       --> ..................................................
FY437345       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
FY453429       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
FY429792       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
FD978584       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EV538087       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX747324       --> GCATCCCAGTGGTTGATCTAGGGGAAGCAAAGATTGAGAACATAATCACA
EX888328       --> ..................................................

               798    -    848
UN17651        --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. landra
EV532760       <-- CAGTCAGGAGTTATCCATATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. maritimus
EX892144       <-- CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus var. oleiformis
EV543587       <-- CAGTCAGGAGTTATCCATATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. landra
EV542178       <-- CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGACTTCACTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- CAGTCAGGAGTTATCCATATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. landra
EW729514       <-- CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- ..................ATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv GSK3-1
EX892278       <-- ..................................................  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> CAGTCAGGAGTTATCCATATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv GSK3-1
EV528887       --> CAGTCAGGAGTTATCCATATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv GSK3-1
FY453429       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv GSK3-1
FY429792       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTT  Raphanus sativus cv GSK3-1
FD978584       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGTGCCGGGCTTCACTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> CAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGACTTCACTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> CAGTCAGGAGTTATCCACATGCTAGCTGAATGCGCGGGTCTTCACTGGTT  Raphanus raphanistrum subsp. maritimus
EX888328       --> ..................................................  Raphanus sativus var. oleiformis

               848    -    898
UN17651        --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV532760       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EX892144       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV543587       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EX776367       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV542178       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV573463       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGGAGTCGGTCTTCCCACTATGC
EW729514       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
FY430921       <-- TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EX892278       <-- ..................................................
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> TGAAGATTGGGGAGTCAAA-CTCTATCTGGAGTCG-TC-TCCCACTATGc
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV528887       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCG-TCTTCCCACTATGT
EX888150       --> ..................................................
FY437345       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
FY453429       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
FY429792       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
FD978584       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EV538087       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EX747324       --> TGAAGATTGGGGAGTCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGT
EX888328       --> ..................................................

               898    -    948
UN17651        --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EV532760       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX892144       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EV543587       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX776367       <-- CAAA..............................................
EV542178       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EV573463       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EW729514       <-- CAAAAGATCATATCATAAAGATTTAT-AAGATGAACCAGTTCTTCAGGCG
FY430921       <-- CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX892278       <-- ..........gATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EV528887       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAG-CG
EX888150       --> ..................................................
FY437345       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
FY453429       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
FY429792       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
FD978584       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTACTTCAGGCG
EV538087       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX747324       --> CAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
EX888328       --> ..........gATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG

               948    -    998
UN17651        --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EV532760       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EX892144       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EV543587       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EX776367       <-- ..................................................
EV542178       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTGCCCGTTGTTGAAAG
EV573463       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EW729514       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
FY430921       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EX892278       <-- TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> TTCAAGCTGATG......................................
EV528887       --> TTCA-GCTGATGAG-AG-AAGAG-ATC-GA-GCTTACCCGTTGT-GAAAG
EX888150       --> ..................................................
FY437345       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTT.....
FY453429       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
FY429792       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
FD978584       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG
EV538087       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTGCCCGTTGTTGAAAG
EX747324       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGGGGCTTACCCGTTGTTGAAAG
EX888328       --> TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAG

               998    -   1048
UN17651        --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EV532760       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EX892144       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTTCACTTTC
EV543587       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EX776367       <-- ..................................................
EV542178       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EV573463       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EW729514       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
FY430921       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EX892278       <-- ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTTCACTTTC
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ACAActg...........................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
FY429792       --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
FD978584       --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EV538087       --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EX747324       --> ACAAGCTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTCCACTTTC
EX888328       --> ACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAGAGATGTTCACTTTC

               1048   -   1098
UN17651        --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EV532760       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EX892144       <-- TCCTCACTGCACCAGAGATCT-CCATGACTACAGGTCAATCACAACGAAG
EV543587       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EX776367       <-- ..................................................
EV542178       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAACCACAACGAAG
EV573463       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EW729514       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
FY430921       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EX892278       <-- TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> TCCTCACTGCACCAGAGATCTACCATGACTACGGGTCAATCACA......
FY429792       --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
FD978584       --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG
EV538087       --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAACCACAACGAAG
EX747324       --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGACG
EX888328       --> TCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAG

               1098   -   1148
UN17651        --> AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAACATGGAGATACTTC  Raphanus raphanistrum subsp. landra
EV532760       <-- AACTTTTTAGTAGCGGTTAGAGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus raphanistrum subsp. maritimus
EX892144       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus sativus var. oleiformis
EV543587       <-- AACTTCTTAGTAGCGGTTAGAGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- AACTTCTTAGTAGCGGTTAGAGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus raphanistrum subsp. landra
EW729514       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAACATGGAGATACCTC  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAACATGGAGATACCTC  Raphanus sativus cv GSK3-1
EX892278       <-- AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> ..................................................  Raphanus sativus cv GSK3-1
EV528887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> ..................................................  Raphanus sativus cv GSK3-1
FY453429       --> ..................................................  Raphanus sativus cv GSK3-1
FY429792       --> AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAACATGGAGATACCTC  Raphanus sativus cv GSK3-1
FD978584       --> AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> AACTTCTTAGTAGCGGTTAGAGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus raphanistrum subsp. maritimus
EX888328       --> AACTTCTTAGTAGCGGTTAGGGAGCATCTGGAGAAGCATGGAGATACCTC  Raphanus sativus var. oleiformis

               1148   -   1198
UN17651        --> AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA  Raphanus raphanistrum subsp. landra
EV532760       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGCTGA  Raphanus raphanistrum subsp. maritimus
EX892144       <-- AGCACCTATCTTGAGTGGTGTCATTGCGTGCACTAAGAACCATACGCTGA  Raphanus sativus var. oleiformis
EV543587       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAAAACCATACGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGCTGA  Raphanus raphanistrum subsp. landra
EW729514       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA  Raphanus sativus cv GSK3-1
EX892278       <-- AGCACCTATCTTGAGTGGTGTCATTGCGTGCACTAAGAACCATACGCTGA  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> ..................................................  Raphanus sativus cv GSK3-1
EV528887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> ..................................................  Raphanus sativus cv GSK3-1
FY453429       --> ..................................................  Raphanus sativus cv GSK3-1
FY429792       --> AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA  Raphanus sativus cv GSK3-1
FD978584       --> AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAAAACCATACGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> AGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGCTGA  Raphanus raphanistrum subsp. maritimus
EX888328       --> AGCACCTATCTTGAGTGGTGTCATTGCGTGCACTAAGAACCATACGCTGA  Raphanus sativus var. oleiformis

               1198   -   1248
UN17651        --> AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. landra
EV532760       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. maritimus
EX892144       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus sativus var. oleiformis
EV543587       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. landra
EW729514       <-- AGGAACTGATTTTGATGCTAGACGCAGAGAAGATCCATAGGATGTATGTG  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- AGGAACTGATTTTGATGCTAGACGCAGAGAAGATCCATAGGATGTATGTG  Raphanus sativus cv GSK3-1
EX892278       <-- AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> ..................................................  Raphanus sativus cv GSK3-1
EV528887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> ..................................................  Raphanus sativus cv GSK3-1
FY453429       --> ..................................................  Raphanus sativus cv GSK3-1
FY429792       --> AGGAACTGATTTTGATGCTAGACGCAGAGAAGATCCATAGGATGTATGTG  Raphanus sativus cv GSK3-1
FD978584       --> AGGAACTGATTTTGATGCTAGACGCAGAGAAGATCCATAG-ATGTATGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus raphanistrum subsp. maritimus
EX888328       --> AGGAACTGATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTG  Raphanus sativus var. oleiformis

               1248   -   1298
UN17651        --> GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTTTCAGAGACATCAT
EV532760       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX892144       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EV543587       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX776367       <-- ..................................................
EV542178       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EV573463       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EW729514       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
FY430921       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX892278       <-- GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
FD978584       --> GTGGATGATTCAG-TAACCTGGGAGGACTCATCACTCTCAGAGACATCAT
EV538087       --> GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX747324       --> GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT
EX888328       --> GTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGACATCAT

               1298   -   1348
UN17651        --> AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EV532760       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EX892144       <-- AGCAAGACTTGTACATGAGCCCCCTGACTATTTTGGTGATTTCTTTGACG
EV543587       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EX776367       <-- ..................................................
EV542178       <-- TGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EV573463       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EW729514       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
FY430921       <-- AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
EX892278       <-- AGCAAGACTTGTACATGAACCACCTGGCTATTTTGGTGATTTCTTTGACG
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> AGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACG
FD978584       --> TGCAAGACTTGTACATGAGCCACCTGGCTAT...................
EV538087       --> TGCAAGACTTGTACATGAGCCAC...........................
EX747324       --> AGCAAGACTTGTACATGAGCCACCTGGCT.....................
EX888328       --> AGCAAGACTTGTACATGAACCACCTGGCTATTTTGGTGATTTCTTTGACG

               1348   -   1398
UN17651        --> GTGTTATGCCTCTACCTCAGAACTACCGAGTCTGAGAAATGCTTTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTTTAAGAAATGCTTTCTTTC  Raphanus raphanistrum subsp. landra
EV532760       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTTTGAGAAATGCTTTCTTTC  Raphanus raphanistrum subsp. maritimus
EX892144       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTCTGAGAAATGCTTTCTTTC  Raphanus sativus var. oleiformis
EV543587       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTCTGAGAAATGCTTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTTTAAGAAATGCTTTCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- GTGTTATGCCTCTACCTCAGAACTACCGGGTCTGAGAAATGCTTTCTTTC  Raphanus raphanistrum subsp. landra
EW729514       <-- GTGTTATGCCTCTACCTCAAAACTACCGAGTCTAAGAAATGCTTTCTTTC  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- GTGTTATGCCTCTACCTCAAAACTACCGAGTCTAAGAAATGCTTTCTTTC  Raphanus sativus cv GSK3-1
EX892278       <-- GTGTTATGCCTCTACCTCAGAACTACCGAGTCTGAGAAATGCTTTCTTCC  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> ..................................................  Raphanus sativus cv GSK3-1
EV528887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> ..................................................  Raphanus sativus cv GSK3-1
FY453429       --> ..................................................  Raphanus sativus cv GSK3-1
FY429792       --> GTGTTATGCCTCTACCTCAAAACTACCGAGTCTAAGAAATGCTTTCTTTC  Raphanus sativus cv GSK3-1
FD978584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888328       --> GTGTTATGCCTCTACCTCAGAACTACCGAGTCTGAGAAATGCTTTCTTCC  Raphanus sativus var. oleiformis

               1398   -   1448
UN17651        --> TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTGTCTGTATGTTT  Raphanus raphanistrum subsp. landra
EV532760       <-- TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTGTCTGTATGTTT  Raphanus raphanistrum subsp. maritimus
EX892144       <-- T---TTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT  Raphanus sativus var. oleiformis
EV543587       <-- TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTGTCTGTATGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776367       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542178       <-- TTTCTTTGTGTAGACTTGTCTTTGCTTTAGTAATGCTTCTCTGTATGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573463       <-- TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTGTCTGTATGTTT  Raphanus raphanistrum subsp. landra
EW729514       <-- TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT  Raphanus sativus cv Early Scarlet Globe
FY430921       <-- TT................................................  Raphanus sativus cv GSK3-1
EX892278       <-- T---TTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT  Raphanus sativus var. oleiformis
EX772413       --> ..................................................  Raphanus raphanistrum subsp. landra
EV547772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV568822       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770056       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929416       --> ..................................................  Raphanus sativus var. oleiformis
FY450102       --> ..................................................  Raphanus sativus cv GSK3-1
EV528887       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888150       --> ..................................................  Raphanus sativus var. oleiformis
FY437345       --> ..................................................  Raphanus sativus cv GSK3-1
FY453429       --> ..................................................  Raphanus sativus cv GSK3-1
FY429792       --> TTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT  Raphanus sativus cv GSK3-1
FD978584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538087       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747324       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX888328       --> TTT---TGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTT  Raphanus sativus var. oleiformis

               1448   -   1498
UN17651        --> GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA
EV532760       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACATAAAATAATAA
EX892144       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA
EV543587       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACATAAAATAATAA
EX776367       <-- ..................................................
EV542178       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTTTAACAGAAAATAATAA
EV573463       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACATAAAATAATAA
EW729514       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA
FY430921       <-- ..................................................
EX892278       <-- GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA
EX772413       --> ..................................................
EV547772       --> ..................................................
EV568822       --> ..................................................
EX770056       --> ..................................................
EY929416       --> ..................................................
FY450102       --> ..................................................
EV528887       --> ..................................................
EX888150       --> ..................................................
FY437345       --> ..................................................
FY453429       --> ..................................................
FY429792       --> ..................................................
FD978584       --> ..................................................
EV538087       --> ..................................................
EX747324       --> ..................................................
EX888328       --> GTGCGAAAGTTCATGAATTTGTGTTTAAACGTTCTAACAGAAAATAATAA

               1498   -   1548
UN17651        --> ATGAAGAAAGAGTCAAGTCTTTGAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774314       <-- ATGAAGAAAGAGTCAAGTCTTTGAGC.
EV532760       <-- ATGAAGAAAGAGTC.............
EX892144       <-- ATGAAGAAAGAGTC.............
EV543587       <-- ATGAAGAAAGAGTCAAGTCTTTGAGCG
EX776367       <-- ...........................
EV542178       <-- ATGAAGAAAGAG...............
EV573463       <-- ATGAAGAAAGAGTCAAGTCTTTGAGCG
EW729514       <-- ATGAAGAAAGAGTCAAGTCTTTGAGg.
FY430921       <-- ...........................
EX892278       <-- ATGAAGAAAGAGTCAAGTCTTTGAG..
EX772413       --> ...........................
EV547772       --> ...........................
EV568822       --> ...........................
EX770056       --> ...........................
EY929416       --> ...........................
FY450102       --> ...........................
EV528887       --> ...........................
EX888150       --> ...........................
FY437345       --> ...........................
FY453429       --> ...........................
FY429792       --> ...........................
FD978584       --> ...........................
EV538087       --> ...........................
EX747324       --> ...........................
EX888328       --> ATGAAGAAAGAGTC.............