1      -     51
UN17660        --> GGATTACCAACGACCAATAAGCAAAAGTCTCCAAACGAAAAATCGCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- .............................ggaAAACGAAAAATCGCAAAA
EV544842       <-- ............................aggcgAACGAAAAATCGCAAAA
FD539120       <-- .......................................ggATCGCAAAA
FD530985       <-- ..................................................
FD969725       <-- ..................................................
EW739350       <-- ..................................................
FD574530       <-- ..................................................
EW738271       <-- ..................................................
FD570549       --> GGATTACCAACGACCAATAAGCAAAAGTCTCCAAACGAAAAATCGCAAAA
FD974201       --> ............................CTCCGAACGAAAAATCGCAAAA
FD964983       --> .............................ggCAAACGAAAAATCGCAAAA
EV524625       --> ..............................ggAAACGAAAAATCGCAAAA
EW734271       --> .............................ggaAAACGAAAAATCGCAAAA
EW735289       --> ..............................ggAAACGAAAAATCGCAAAA
EY921600       --> .............................ggaAAACGAAAAATCGCAAAA
EV549351       --> ............................aggcgAACGAAAAATCGCAAAA
FD971616       --> ..............................gggAACGAAAAATCGCAAAA
EY900794       --> ...............................ggatCGAAAAATCGCAAAA
FD535295       --> ...............................ggatCGAAAAATCGCAAAA
FD543246       --> .......................................ggATCGCAAAA

               51     -    101
UN17660        --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- TCTTTCTTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EV544842       <-- TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD539120       <-- TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD530985       <-- .................AATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD969725       <-- ...........................................CCGCCTT
EW739350       <-- ..................................................
FD574530       <-- ..................................................
EW738271       <-- ..................................................
FD570549       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD974201       --> TCTTTCGTGAACCAAAAAACGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD964983       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EV524625       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EW734271       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EW735289       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EY921600       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EV549351       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD971616       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
EY900794       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD535295       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT
FD543246       --> TCTTTCGTGAACCAAAAAATGTCACGTCTCCCGATCCTAATCGCCGCCTT

               101    -    151
UN17660        --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CCTCTTCCTCTCCTTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- CCTCTTCCTCTCCATCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. maritimus
FD969725       <-- CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTTTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- ................GCCACCGCCGAATCAGACACTCCGACGGCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- .......................................GACGGCGTACT  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> CCTCTTCCTCTCCTTCGCCACCGCCGAATCGGACTCTCCGACGGCGTACT  Raphanus sativus cv Early Scarlet Globe
FD974201       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> CCTCTTCCTCTCCGTCGCCACCGCTGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. maritimus
EV524625       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. maritimus
EW734271       --> CCTCTTCCTCTCCTTCGCCACCGCCGAATCAGACACTCCGACGGCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> CCTCTTCCTCTCCTTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. landra
EV549351       --> CCTCTTCCTCTCCATCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. maritimus
FD535295       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. maritimus
FD543246       --> CCTCTTCCTCTCCGTCGCCACCGCCGAATCAGACTCTCCGACGGCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN17660        --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EV544842       <-- CCCTCCTCCAGAACTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD539120       <-- CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD530985       <-- CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD969725       <-- CCCTCCTCCAGAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EW739350       <-- CCCTCCTCCAGAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD574530       <-- CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EW738271       <-- ..............TACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD570549       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD974201       --> CCCTCCTCCAGAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD964983       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EV524625       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EW734271       --> CCCTCCTCCAGAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EW735289       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EY921600       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EV549351       --> CCCTCCTCCAGAACTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD971616       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
EY900794       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD535295       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC
FD543246       --> CCCTCCTCCAAAGCTACAACTTCCCCGTCGGAATCCTCCCAAAAGGAGTC

               201    -    251
UN17660        --> GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- GTCGCCTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. maritimus
FD969725       <-- GTCGCCTACGATCTCGACACGTCGACGGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- GTCGCTTACGGTCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- GTCGCGTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> GTCGCGTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Early Scarlet Globe
FD974201       --> GTCGCCTACGATCTCGACACGTCGACGGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> GTCGCGTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. maritimus
EV524625       --> GTCGCGTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. maritimus
EW734271       --> GTCGCTTACGGTCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> GTCGCGTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. landra
EV549351       --> GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> GTCGCCTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. maritimus
FD535295       --> GTCGCTTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. maritimus
FD543246       --> GTCGCCTACGATCTCGACACGTCGACAGGCAAATTCCACGCCTACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN17660        --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CGGCTCCTGCAGCTTCTCCCTCGTGGGGTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- CGGCTCCTGCAGCTTCTCCCTCGTGGGATCTTACCAGCTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. maritimus
FD969725       <-- CGGCTCCTGCAGCTTTTCCCTCGTGGGGTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- CGGCTCCTGCAGCTTCTCCCTCGCGGGCTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- CGGCTCCTGCAGCTTTTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- CGGCTCCTGCAGCTTCTCCCTCGTGGGGTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Early Scarlet Globe
FD974201       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGGTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCGTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. maritimus
EV524625       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCGTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. maritimus
EW734271       --> CGGCTCCTGCAGCTTCTCCCTCGCGGGCTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGGTCTTACCAGTTGAACTACAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCGTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. landra
EV549351       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGATCTTACCAGCTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. maritimus
FD535295       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGCTCTTACCAGTTGAACTACAAAT  Raphanus raphanistrum subsp. maritimus
FD543246       --> CGGCTCCTGCAGCTTCTCCCTCGTGGGATCTTACCAGCTGAACTACAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN17660        --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EV544842       <-- -GACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGC
FD539120       <-- CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD530985       <-- CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD969725       <-- CGACGATCAGCGGCTACATTTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EW739350       <-- CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGC
FD574530       <-- CGACGATCAGCGGCTACATTTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EW738271       <-- CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD570549       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD974201       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD964983       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EV524625       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EW734271       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGC
EW735289       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EY921600       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EV549351       --> -GACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGC
FD971616       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
EY900794       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD535295       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT
FD543246       --> CGACGATCAGCGGCTACATCTCCGAGAACAAGCTCACGAAGCTGAGTGGT

               351    -    401
UN17660        --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. maritimus
FD969725       <-- ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAAGTCATCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus sativus cv Early Scarlet Globe
FD974201       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. maritimus
EV524625       --> ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. maritimus
EW734271       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAAGTCATCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. landra
EV549351       --> ATCAAGGTCAAAGTCCTCTTCCTCTGGCTCAACATCGTCGAGGTCATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. maritimus
FD535295       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. maritimus
FD543246       --> ATCAAGGTCAAAGTCCTCTTCCTGTGGCTCAACATCGTCGAGGTCGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN17660        --> GAAAGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- GAACGGAGACGAGATGGCGTTTTCCGTTGGGATCGCGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- GAAAGGAGACGAGATGGCGTTCTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- GAAAGGAGACGAGATGGCGTTTTCGGTTGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. maritimus
FD969725       <-- GAAAGGAGACGAGATGGCGTTTTCCGTTGGGATTACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- GAAAGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- GAACGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- GAACGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> GAACGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Early Scarlet Globe
FD974201       --> GAAAGGAGACGAGATGGCGTTTTCCGTTGGGATTACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. maritimus
EV524625       --> GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. maritimus
EW734271       --> GAAAGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> GAACGGAGACGAGATGGCGTTTTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. landra
EV549351       --> GAAAGGAGACGAGATGGCGTTCTCCGTTGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> GAAAGGAGACGAGATGGCGTTTTCGGTTGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. maritimus
FD535295       --> GAAAGGAGACGAGATGGCGTTTTCGGTTGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. maritimus
FD543246       --> GAAAGGAGACGAGATGGCGTTTTCCGTCGGGATCACGTCGGCGAATTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN17660        --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- AGATCGAGGAGTTCCTAGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. maritimus
FD969725       <-- AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus sativus cv Early Scarlet Globe
FD974201       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> AGATCTAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGT-TTCGAGTG  Raphanus raphanistrum subsp. maritimus
EV524625       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGT-TTCGAGTG  Raphanus raphanistrum subsp. maritimus
EW734271       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGGGTTTGAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGGGTTTGAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGT-TTCGAGTG  Raphanus raphanistrum subsp. landra
EV549351       --> AGATCGAGGAGTTTCTGGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> AGATCGAGGAGTTTCTAGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. maritimus
FD535295       --> AGATCGAGGAGTTCCTAGAGTCTCCTCAGTGTGGGTGTGGG-TTCGAGTG  Raphanus raphanistrum subsp. maritimus
FD543246       --> AGATCGAGGAGTTCTTGGAGTCTCCTCAGTGTGGGTGTGGG-TTTGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN17660        --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CGAGAAATCGAGTTTCGACACGTTTGACAAAAGCTTCCCTTTTGTCTCTT
EV544842       <-- CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD539120       <-- CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD530985       <-- CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD969725       <-- CGAGAAATCGAGTTCCGATAAGTTTGACAGAAGCTTCCCTTTTGCCTTTT
EW739350       <-- CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD574530       <-- CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTTTT
EW738271       <-- CGAGAAATCGAGTTCCGACACGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD570549       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD974201       --> CGAGAAATCGAGTTCCGATAAGTTTGACAGAAGCTTCCCTTTTGCCTCTT
FD964983       --> TGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTCGTCTCCT
EV524625       --> TGAGAAATCGAGTTCCGACAAGTTTGACAGAGGCTTCCCTTTTGTCTCTT
EW734271       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
EW735289       --> CGAGAAATCGAGTTCCGACACGTTTGACAGAAGCTTCCCTTTTGTCTCTT
EY921600       --> TGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
EV549351       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD971616       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
EY900794       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD535295       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT
FD543246       --> CGAGAAATCGAGTTCCGACAAGTTTGACAGAAGCTTCCCTTTTGTCTCTT

               551    -    601
UN17660        --> CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- CGTCGTGAAATGATTGAATCTTTGTCTAATAATAGTATGTTCTCGTCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- CGTCGTGGAATGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. maritimus
FD969725       <-- CGTCGTGAAATGATTGAATCTTTGTCTAATAATAATATGTTATTGTCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus sativus cv Early Scarlet Globe
FD974201       --> CGTCGTGAAATGATTGAATCTTTGTCTAATAATAATATGTTATTGTCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> CGTCGTGAAAAAATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. maritimus
EV524625       --> CGTCGTGAAAAAATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. maritimus
EW734271       --> CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> CGTCGTGAAAAAATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. landra
EV549351       --> CGTCGTGAAAAGATTGAATCTTTGTCTAATAATAATAAGTTATTGTCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> CGTCGTGAAATGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCc..  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> CGTCGTGAAATGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. maritimus
FD535295       --> CGTCGTGGAATGATTGAATCTTTGTCTAATAATAATATGTTCTCGTCATT  Raphanus raphanistrum subsp. maritimus
FD543246       --> CGTCGTGAAATGATTGAATCTTTGTCTAATAATAGTATGTTCTCGTCATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN17660        --> GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- GGCTGAGGAATCATTT-AAGTTTATGTTTTATTGGTTCAATC........  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- GGCTGAGGAACCCTTTTAAGTTTATGTT--ATTGTTTTAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- GGCTGAGGAATCATTT-AAGTTTATGTT--ATTGTTTCAATCAATCTGGT  Raphanus raphanistrum subsp. maritimus
FD969725       <-- GGCTGAGAAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- GGCTGAGGAATCATTT-AAGTTTATGTTTTATTGTTTCAATCAATCTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> GGCTGAG-AACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAA-CTGGT  Raphanus sativus cv Early Scarlet Globe
FD974201       --> GGCTGAGAAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> GTCTGAGGAATCCTTT-AAGTTTATGTT--ATTGTTTtaa..........  Raphanus raphanistrum subsp. maritimus
EV524625       --> GTCTGAGGAATCCTTT-AAGTTTATGTT--ATTGTTTtaa..........  Raphanus raphanistrum subsp. maritimus
EW734271       --> GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> GGCTGAGGAATCATTT-AAGTTTATGTTTTATTGTTTCAATCAATCTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> GTCTGAGGAATCCTTT-AAGTTTATGTT--ATTGTTTta...........  Raphanus raphanistrum subsp. landra
EV549351       --> GGCTGAGGAACCCTTT-AAGTTTATGTT--ATTGTTTCAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> GGCTGAGGAATCATTT-AAGTTTATGTT---TTGTTTC............  Raphanus raphanistrum subsp. maritimus
FD535295       --> GGCTGAGGAATCATTT-AAGTTTATGTT--ATTGTTTCAATCAATCTGGT  Raphanus raphanistrum subsp. maritimus
FD543246       --> GGCTGAGGAACCCTTTTAAGTTTATGTT--ATTGTTTTAATCAAACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17660        --> TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCGATCTGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544842       <-- TATGGTTAGGATTCGTCATGCTTATGTTATTGTTTCAATCG.........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539120       <-- TATGGTTAGGATTTGTTATGTTTATGTTATTGTTgc..............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530985       <-- TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCTATCTGGTGG  Raphanus raphanistrum subsp. maritimus
FD969725       <-- TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739350       <-- TATGGTTAGGATTCGTCATGCTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD574530       <-- TATGGTTAGGATTCGTCATGTTTGTGTTATTGTTTCAATCGATCTGGTGG  Raphanus sativus cv Early Scarlet Globe
EW738271       <-- TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD570549       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD974201       --> TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964983       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524625       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW734271       --> TATGGTTAGGATTCGTCATGCTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW735289       --> TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCGATCTGGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY921600       --> ..................................................  Raphanus raphanistrum subsp. landra
EV549351       --> TATGGTTAGGATTCGTCATGCTTATGTTATTGTTTCAATCG.........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD971616       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900794       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD535295       --> TATGGTTAGGATTTGTTATGTTTATGTTATTGTTTCAATCTATCTGGTGG  Raphanus raphanistrum subsp. maritimus
FD543246       --> TATGGTTAGGATTTGTTATGTTTATGTTATTGTTgc..............  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN17660        --> AAAGATGATTTGCTTGTAGATGTTTGAGGATCCTTAGTGAATATGCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- ..................................................
EV544842       <-- ..................................................
FD539120       <-- ..................................................
FD530985       <-- AAAGATGATTTGCTTGTAGATGTTTGAGGATCCTTAGTGAATATGCTTTT
FD969725       <-- AAAGATGATTTGCTTGT.................................
EW739350       <-- AAAGATGATTTGGTTGTAGATGTTTGAGGATCCTTAGTGAATATGCTTTT
FD574530       <-- AAAGATG...........................................
EW738271       <-- AAAGATGATTTGCTTGTAGATGTTTGAGGATCCTTAGTAAATATGCTTTT
FD570549       --> ..................................................
FD974201       --> AAAGATGATTTGCTTGT.................................
FD964983       --> ..................................................
EV524625       --> ..................................................
EW734271       --> AAAGATGATTTGGTTGTAGATGTTTGAGGATCCTTAGTGA-TATGCTTTT
EW735289       --> AA-GATGATT-GCTTGTAGATGTTTGAGGATCCTTAGT-AATATGCT...
EY921600       --> ..................................................
EV549351       --> ..................................................
FD971616       --> ..................................................
EY900794       --> ..................................................
FD535295       --> AAAGATGATTTGCTTGTAGATGTTTGAGGATCCTTAGTGAATATGCTTTT
FD543246       --> ..................................................

               751    -    801
UN17660        --> GGTGGGTAAGTGTTTGAATCAGGACATGGTTCTTCAGAGAACTAGACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- ..................................................
EV544842       <-- ..................................................
FD539120       <-- ..................................................
FD530985       <-- GGTGGGTAAGTGTTTGAATCAGGACATGGTTCTTCAGAGAACTAGACTGG
FD969725       <-- ..................................................
EW739350       <-- GGTGGGTAAGTGTTTGAATCAGGACATGGTTCTTCAGAGAACTAGACTGG
FD574530       <-- ..................................................
EW738271       <-- GGTGGGTAAGTGTTTGAATCAGGACATGGTTCTTCAGAGAACTAGACTGG
FD570549       --> ..................................................
FD974201       --> ..................................................
FD964983       --> ..................................................
EV524625       --> ..................................................
EW734271       --> GGTGGGTAAGTGTTTGAATCAG-ACATGGTTCTTCAGAG...........
EW735289       --> ..................................................
EY921600       --> ..................................................
EV549351       --> ..................................................
FD971616       --> ..................................................
EY900794       --> ..................................................
FD535295       --> GGTGGGTAAGTGTTTGAA................................
FD543246       --> ..................................................

               801    -    851
UN17660        --> TTCCTGTACTGCATCACACCATTGTGTTGACGATCAATGAGTTAATACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547818       <-- ..................................................
EV544842       <-- ..................................................
FD539120       <-- ..................................................
FD530985       <-- TTCCTGTACTGCATCACACCATCGTGTTGACGATCAATGAGTTAATACAT
FD969725       <-- ..................................................
EW739350       <-- TTCCTGTACTGCATCACACCATTGTGTTGACGATCAATGAGTTAATACAT
FD574530       <-- ..................................................
EW738271       <-- TTCCTGTACTGCATCGCACCATTGTGTTGACGATCA-TGAGTTAATACAT
FD570549       --> ..................................................
FD974201       --> ..................................................
FD964983       --> ..................................................
EV524625       --> ..................................................
EW734271       --> ..................................................
EW735289       --> ..................................................
EY921600       --> ..................................................
EV549351       --> ..................................................
FD971616       --> ..................................................
EY900794       --> ..................................................
FD535295       --> ..................................................
FD543246       --> ..................................................

               851    -    901
UN17660        --> CATTACCATTGAGCT
                   ~~~~~~~~~~~~~~~
FD547818       <-- ...............
EV544842       <-- ...............
FD539120       <-- ...............
FD530985       <-- CATTACCATTGAGCT
FD969725       <-- ...............
EW739350       <-- ...............
FD574530       <-- ...............
EW738271       <-- ...............
FD570549       --> ...............
FD974201       --> ...............
FD964983       --> ...............
EV524625       --> ...............
EW734271       --> ...............
EW735289       --> ...............
EY921600       --> ...............
EV549351       --> ...............
FD971616       --> ...............
EY900794       --> ...............
FD535295       --> ...............
FD543246       --> ...............