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Alignment for radish unigene UN17664

               1      -     51
UN17664        --> GAACATTGCCAAATGGTGGAAAAAAGAGGGTGACAAGATTGAAGTAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> GAACATTGCCAAATGGTGGAAAAAAGAGGGTGACAAGATTGAAGTAGGTG
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               51     -    101
UN17664        --> ATGTCATAGGTGAAATCGAGACTGACAAAGCCACTCTGGAATTTGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> ATGTCATAGGTGAAATCGAGACTGACAAAGCCACTCTGGAATTTGAAAGC
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               101    -    151
UN17664        --> CTTGAAGAAGGGTACCTGGCTAAGATTCTAATTCCTGAAGGTTCCAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CTTGAAGAAGGGTACCTGGCTAAGATTCTAATTCCTGAAGGTTCCAAGGA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               151    -    201
UN17664        --> TGTGGCTGTCGGAAAGCCGATTGCACTTATAGTTGAAGATGCTGAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> TGTGGCTGTCGGAAAGCCGATTGCACTTATAGTTGAAGATGCTGAAAGCA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               201    -    251
UN17664        --> TTGAAACCATCAAGTCTTCTTCCGCAGGTGGTTCTGAGGCTGTTACTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> TTGAAACCATCAAGTCTTCTTCCGCAGGTGGTTCTGAGGCTGTTACTGAA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               251    -    301
UN17664        --> AAACTAGCCCCTCAAAGTGTTGTAGATAAATCCGGGGGGAAGAAAGCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> AAACTAGCCCCTCAAAGTGTTGTAGATAAATCCGGGGGGAAGAAAGCAGG
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               301    -    351
UN17664        --> CTTCACAAAGATCAGTCCTGCAGCAAAGCTTTTGATTTTAGAACATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CTTCACAAAGATCAGTCCTGCAGCAAAGCTTTTGATTTTAGAACATGGAG
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               351    -    401
UN17664        --> GCATCATCAATTGAGGCCTCGGGTCCCTACGGTACATTACTAAAATCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> GCATCATCAATTGAGGCCTCGGGTCCCTACGGTACATTACTAAAATCGGA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               401    -    451
UN17664        --> CGTTGTTGCCGCAATTGCTTCTGGAAAAACATCTAAAAAATCACTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CGTTGTTGCCGCAATTGCTTCTGGAAAAACATCTAAAAAATCACTCTCTA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               451    -    501
UN17664        --> CGGAGAAGAAACAGCCATCAAAGGAGAACCTATCTAAATCCTCTTCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CGGAGAAGAAACAGCCATCAAAGGAGAACCTATCTAAATCCTCTTCCGTA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               501    -    551
UN17664        --> TCGCGGCCTGAATCAAAGTCTTCTGTGACACCGTCAAATGATTATGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> TCGCGGCCTGAATCAAAGTCTTCTGTGACACCGTCAAATGATTATGAAGA
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               551    -    601
UN17664        --> TTTTCCCAATAGTCAAATTCGCAAGATTATAGCCAAACGTTTGTTGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> TTTTCCCAATAGTCAAATTCGCAAGATTATAGCCAAACGTTTGTTGGAAT
EX763273       --> .............................gAGCCAAACGTTTGTTGGAAT
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> ..................................................

               601    -    651
UN17664        --> CAAAACAGAAGATACCCCATTTGTATTTATCATCAGATGTTGTATTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ..................................................
EV573811       <-- ..................................................
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CAAAACAGAAGATACCCCATTTGTATTTATCATCAGATGTTGTATTGGAT
EX763273       --> CAAAACAGAAGATACCCCATTTGTATTTATCATCAGATGTTGTATTGGAT
EV569222       --> ...............................................GAT
EY931059       --> ..................................................
FD542565       --> ..................................................

               651    -    701
UN17664        --> CCTCTTCTTGCATTTAGAAAAGAACTTCAAGAAAACCATGGTGTTAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ....TTCTTGCATTTAGAAAAGAACTTCAAGAAAACCATGGTGTTAAAGT
EV573811       <-- .................AAAAGAACTTCAAGAAAACCATGGTGTTAAAGT
EX777009       <-- ..................................................
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> CCTCTTCTTGCATTTAGAAAAGA-CTTCAAGAAAACCATGGTGTTAAAGT
EX763273       --> CCTCTTCTTGCATTTAGAAAAGAACTTCAAGAAAACCATGGTGTTAAAGT
EV569222       --> CCTCTTCTTGCATTTAGAAAAGAACTTCAAGAAAACCATGGTGTTAAAGT
EY931059       --> ..................................................
FD542565       --> ..................................................

               701    -    751
UN17664        --> GTCGGTCAATGACATAGTTATTAAAGCAGTGGCAGTCGCACTGAGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- GTCGGTCAATGACATAGTTATTAAAGCAGTGGCAGTCGCACTGAGGAATG
EV573811       <-- GTCGGTCAATGACATAGTTATTAAAGCAGTGGCAGTCGCACTGAGGAATG
EX777009       <-- .................................................G
FD529798       <-- ..................................................
EY927106       <-- ..................................................
FD540062       --> GTCGGTCAATGAC.....................................
EX763273       --> GTCGGTCAATGACATAGTTATTAAAGCAGTGGCAGTCGCACTGAGGAATG
EV569222       --> GTCGGTCAATGACATAGTTATTAAAGCAGTGGCAGTCGCACTGAGGAATG
EY931059       --> ..................................................
FD542565       --> ..................................................

               751    -    801
UN17664        --> TACGACATGCTAATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TACGACAAGCTAATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
EV573811       <-- TACGACATGCTAATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
EX777009       <-- TACGACATGCTAATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
FD529798       <-- ...........AATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
EY927106       <-- ..................................................
FD540062       --> ..................................................
EX763273       --> TACGACAAGCTAATGCTTTCTGGGACGCTGAGAAAGGAGAAATTGTTTTG
EV569222       --> TACGACATGCTAATGCTTTCTGGGATGCTGAGAAAGGAGAAATTGTTTTG
EY931059       --> ........................gTGCTGAGAAAGGAGAAATTGTTTTG
FD542565       --> ..................................................

               801    -    851
UN17664        --> TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
EV573811       <-- TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
EX777009       <-- TGTGAGGATGTTGACATATCAATTGCAGTTGTAACTGAGAAGGGCTTAAT
FD529798       <-- TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
EY927106       <-- ..................................................
FD540062       --> ..................................................
EX763273       --> TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
EV569222       --> TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
EY931059       --> TGTGAGGATGTTGACATATCAATTGCAGTTGCAACTGAGAAGGGCTTAAT
FD542565       --> ..............gATATCAATTGCAGTTGCAACTGATAAGGGCTTAAT

               851    -    901
UN17664        --> GACTCC-AATTATCAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- GACTCC-AATTATTAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
EV573811       <-- GACTCC-AATTATCAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
EX777009       <-- GACTCC-AATTATCAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
FD529798       <-- GACTCCCAATTATCAGAAATGCTGACCAAAAATCCATTTCTGCTATATCC
EY927106       <-- ..................................................
FD540062       --> ..................................................
EX763273       --> GACTCC-AATTATCAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
EV569222       --> GACTCC-AATTATCAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC
EY931059       --> GACTCC-AATTATCAGAAATGCTGACCAAAAATCCATTTCTGCTATATCC
FD542565       --> GACTCC-AATTATTAGAAATGCTGACCAGAAATCTATTTCTGCTATATCC

               901    -    951
UN17664        --> TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
EV573811       <-- TCAGAGGTTAAGGAGCTGGCACAAAAGGCACGATCTGGAAAGCTTGCTCC
EX777009       <-- TCAGAGGTTAAGGAGCTGGCACAAAAGGCACGATCTGGAATGCTTGCTCC
FD529798       <-- TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
EY927106       <-- ..................GCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
FD540062       --> ..................................................
EX763273       --> TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
EV569222       --> TCAGAGGTTAAGGAGCTGGCACAAAAGGCACGATCTGGAAAGCTTGCTCC
EY931059       --> TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC
FD542565       --> TCAGAGGTTAAGGAGCTGGCACAAAAGGCGCGATCTGGAAAGCTTGCTCC

               951    -   1001
UN17664        --> TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
EV573811       <-- TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTCGGAATGTATC
EX777009       <-- TCGTGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTCGGAATGTATC
FD529798       <-- TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
EY927106       <-- TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
FD540062       --> ..................................................
EX763273       --> TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
EV569222       --> TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTCGGAATGTATC
EY931059       --> TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC
FD542565       --> TCATGAGTTTCAAGGAGGGACATTCAGCATTTCAAATCTAGGAATGTATC

               1001   -   1051
UN17664        --> CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
EV573811       <-- CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
EX777009       <-- CTGTGGACCAATTTTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
FD529798       <-- CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
EY927106       <-- CTGTGGACCAATTCTGCACAATCATTAACCCCCCTCAGGCTGGAATTCTA
FD540062       --> ..................................................
EX763273       --> CTGTGGACCAATTCTGCGCCATCATTAACCCCCCTCAGGCTGGAATTCTA
EV569222       --> CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA
EY931059       --> CTGTGGACCAATTCTGCACAATCATTAACCCCCCTCAGGCTGGAATTCTA
FD542565       --> CTGTGGACCAATTCTGCGCAATCATTAACCCCCCTCAGGCTGGAATTCTA

               1051   -   1101
UN17664        --> GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
EV573811       <-- GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
EX777009       <-- GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
FD529798       <-- GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAATTCTTGGAATAGATGG
EY927106       <-- GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAATTCTTGGAATAGATGG
FD540062       --> ..................................................
EX763273       --> GCAGTCGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
EV569222       --> GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG
EY931059       --> GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAATTCTTGGAATAGATGG
FD542565       --> GCAGTTGGTAGAGGAAATAAAGTTGTGGAGGCAGTTCTTGGAATAGATGG

               1101   -   1151
UN17664        --> AACTGAGAAGCCTTCGGTTGTAACAAAAATGAATGTGACGCTATCCGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- AACCGAGAAGCCTTCTCTAGTAACAAAAATGAATGTGACGTTATCCGCTG
EV573811       <-- AACTGAGAAGCCTTCGGTTGTAACGAAAATGAATGTGACGCTATCCGCTG
EX777009       <-- AACTGAGAAGCCTTCGGTTGTAACAAAAATGAATGTGACGCTATCCGCTG
FD529798       <-- AACTGAGAAGCCTTCGGTTGTAACAAAAATGAATGTGACGCTATCCGCTG
EY927106       <-- AACTGAGAAGCCTTCGGTTGTAACAAAAATGAATGTGACGCTATCCGCTG
FD540062       --> ..................................................
EX763273       --> AACTGAGAAGCCTTCTCTTGTAACAAAAATG--TGTGACGCTATCCGCTG
EV569222       --> AACTGAGAAGCCTTCGGTTGTAACGAAAATGAATGTGACGCTATCCGCTG
EY931059       --> AACTGAGAAGCCTTCGGTTGTAACAAAAATGAATGTGACGCTATCCGCTG
FD542565       --> AACCGAGAAGCCTTCTCTAGTAACAAAAATGAATGTGACGTTATCCGCTG

               1151   -   1201
UN17664        --> ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
EV573811       <-- ATCATCGGATCTTCGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
EX777009       <-- ATCATCGGATTTTCGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
FD529798       <-- ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
EY927106       <-- ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
FD540062       --> ..................................................
EX763273       --> ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTATCTGAACTG
EV569222       --> ATCATCGGATCTTCGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
EY931059       --> ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG
FD542565       --> ATCATCGGATCTTTGATGGACAAGTTGGAGCTTCGTTTCTGTCTGAACTG

               1201   -   1251
UN17664        --> CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
EV573811       <-- CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
EX777009       <-- CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
FD529798       <-- CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
EY927106       <-- CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
FD540062       --> ..................................................
EX763273       --> CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGATAGAAAGATTC
EV569222       --> CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
EY931059       --> CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC
FD542565       --> CGTTCAAACTTTGAGGATGTTCGAAGACTTCTTCTGTGAGAGAAAGATTC

               1251   -   1301
UN17664        --> AGCTGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- AGCTATTGATGAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
EV573811       <-- AGCTGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
EX777009       <-- AGCTGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
FD529798       <-- AGCGGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
EY927106       <-- AGCGGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
FD540062       --> ..................................................
EX763273       --> AGCTGTTGATGAAATGAAACCTTGGATGATTACCACATAATAAACTTTGA
EV569222       --> AGCTGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
EY931059       --> AGCGGTTGATTAAATGAAACCTTGGATGATTACCACATAATAAACCTTGG
FD542565       --> AGCTATTGATGAAATGAAACCTTGGATGATTACCACATAATAAACCTCGG

               1301   -   1351
UN17664        --> ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTTCAGGATAAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTTCAGGATAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573811       <-- ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTTCAGGATAAAGCTC  Raphanus raphanistrum subsp. landra
EX777009       <-- ATCGACGTGCACATCCAGAACCATAACTTTTGGTCTTCAGGATAAAGCTC  Raphanus raphanistrum subsp. landra
FD529798       <-- ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTACAGGACAAAGCTC  Raphanus raphanistrum subsp. maritimus
EY927106       <-- ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTACAGGATAAAGCTC  Raphanus sativus var. oleiformis
FD540062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763273       --> ATCGACGTTCACATCCAGAACCATAACTGTTGGTCTACAAGATAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569222       --> ATCGACGTGCACATCCAGAACCATAACTGTTGGTCT..............  Raphanus raphanistrum subsp. landra
EY931059       --> ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTACAGGATAAAGCTC  Raphanus sativus var. oleiformis
FD542565       --> ATCGACGTGCACATCCAGAACCATAACTGTTGGTCTTCAGGATAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1351   -   1401
UN17664        --> TGAATCACTTGTTTCGGTTTTTTTT-CCATTTGGTTACCGACTACCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TGAATCACTTGTTTCGGTTTTTTTT-CCATTTGGTTACCGACTACCAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573811       <-- TGAATCACTTCTTTCGTTTTTTTTTTCCATTTGGTTACCGACTACCAAAA  Raphanus raphanistrum subsp. landra
EX777009       <-- TGAATCACTTCTTTCGTTTTTTTTTTCCATTTGGTTACCGACTACCAAAA  Raphanus raphanistrum subsp. landra
FD529798       <-- TGAATCACTTGTTTCGGTTTTTTT--CCATTTGGTTACCGACTACCAAAA  Raphanus raphanistrum subsp. maritimus
EY927106       <-- TGAATCACTTGTTTCGGTTTTTTT--CCATTTGGTTACCGACTACCAAAA  Raphanus sativus var. oleiformis
FD540062       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763273       --> TGA...............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569222       --> ..................................................  Raphanus raphanistrum subsp. landra
EY931059       --> TGAATCACTTGTTTCGGTTTTTTT--CCATTTGGTTACCGACTACCAAAA  Raphanus sativus var. oleiformis
FD542565       --> TGAGTCACTTGTTTCGGTTTTTTTTTCCATTTGGTTACCGACTACCAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1401   -   1451
UN17664        --> ATTGGTTTTGGTTTTACAATTCTTGAGGTGTTTTTGTT-T-GCCCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ATGGGTTTTGGTTTTACAATTCTTGAGGTGTCTCTGTT-TTGCCCGATCC
EV573811       <-- ATTGGTTTTGGTTTTACAATTCTTGAGGTGTTTTTGTT-T-GCCCGATCC
EX777009       <-- ATTGGTTTTGGTTTTACAATTCTTGAGGTGTTTTTGTT-T-GCCCGATCC
FD529798       <-- ATTGGTTTTGGTTTTACTATTGTTGAGGTGTTTATGTT-T-GCCCGGTCC
EY927106       <-- ATTGGTTTTGGTTTTACTATTGTTGAGGTGTTTTTGTT-T-GCCCGGTCC
FD540062       --> ..................................................
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> A.................................................
FD542565       --> ATGGGTTTTGGTTTTACAATTCTTGAGGTGTTTCTGTTCT-GCCCGATCC

               1451   -   1501
UN17664        --> TCTTAAAAATGAATAATTTCAGCTGTCAATAACACACCATAACAGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- TCGTAAAAATAAATAATTTCAGCTGcc.......................
EV573811       <-- TCTTAAAAATGAATAATTTCAACTGTCGATAAC-CACCATAACAGGTGAA
EX777009       <-- TCTTAAAAATGAATAATTTCAACTGTCAATAAC-CACCATAACAGGTGAA
FD529798       <-- TCTTAAAAATAATTAATTTCAGCTGTCAATAACACACCATAACAGGTGAA
EY927106       <-- TCTTAAAAATAATTAATTTCAGCTGTCAATAACACACCATAACAGGTGAA
FD540062       --> ..................................................
EX763273       --> ..................................................
EV569222       --> ..................................................
EY931059       --> ..................................................
FD542565       --> TCGTAAAAA.........................................

               1501   -   1551
UN17664        --> ATGATAAAGTTTTCACCAATCCGAAACAATTTGACGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901676       <-- ......................................
EV573811       <-- ATGATAAAGTTTTCACC.....................
EX777009       <-- ATGATAAAGTTTTCACCAAcc.................
FD529798       <-- A.....................................
EY927106       <-- ATGATAAAGTTTTTACCAATCCGAAACAATTTGACGCC
FD540062       --> ......................................
EX763273       --> ......................................
EV569222       --> ......................................
EY931059       --> ......................................
FD542565       --> ......................................