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Alignment for radish unigene UN17676

               1      -     51
UN17676        --> CGTTAGCAGTTTCAGATCAGATTTGAAGAGTACTCTCGATTTATGAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> CGTTAGCAGTTTCAGATCAGATTTGAAGAGTACTCTCGATTTATGAGTTA
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               51     -    101
UN17676        --> CAACTGCCTTCAATTACAAATGCCATGTTTTTTAAACTCAAATTCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ................................................gG
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> CAACTGCCTTCAATTACAAATGCCATGTTTTTTAAACTCAAATTCTTCAG
EX899495       --> ...............................................agG
EY896416       --> ................................................gG
EY919051       --> ...............................................agG
FD555244       --> ...............................................agG
FD943495       --> ...............................................agG
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               101    -    151
UN17676        --> TGAACGAGCTCTTAAAATGAAAACAAGTAAAAAAAACATTGAGTTCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TGAACGAGCTCT-AAAATGAAACCAAGTAAA---AACATTGAGTTCCGTT  Raphanus raphanistrum subsp. landra
EV551705       <-- .........................taTAAGAAAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- ............................AAAAAAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> TGAATGGGCACTTAAAATGAAAACAAGTAAAAAAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> TGAATGAGCTCTTAAAATGAAAACAAGTAAAAAAAACATTGAGTTCTGTT  Raphanus sativus cv Early Scarlet Globe
EY896416       --> TGAACGAGCTCTTAAAATGAAACCAAGTAAAAA---CATTGAGTTCTGTT  Raphanus raphanistrum subsp. maritimus
EY919051       --> TGAACGAGCTCTTAAAATGAAACCAAGTAAAAA---CATTGAGTTCTGTT  Raphanus raphanistrum subsp. landra
FD555244       --> TGAACGAGCTCTTAAAATGAAACCAAGTAAAAA---CATTGAGTTCTGTT  Raphanus raphanistrum subsp. landra
FD943495       --> TGAATGAGCTCTTAAAATGAAAACAAGTAAAAAAAACATTGAGTTCTGTT  Raphanus sativus cv Early Scarlet Globe
EV547344       --> .....GAGCTCTTAAAATGAAAACAAGTAAAAAAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> .....GAGCTCTTAAA-TGAAA-CCAGTAAAAA---CATTGAGTTCTGTT  Raphanus sativus cv GSK3-1
EW738044       --> ..................ggAAACAAGTAAAAAAAACATTGAGTTCTGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> ..............................AAAAAACATTGAGTTCTGTT  Raphanus sativus cv Early Scarlet Globe
EV546758       --> ............................aagAAAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> .................................AAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. maritimus
FD983262       --> ...............................agAAACATTGAGTTCTGTT  Raphanus raphanistrum subsp. landra
FD546268       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> ..................................................  Raphanus raphanistrum subsp. landra
EX766581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN17676        --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EV551705       <-- TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EV536622       <-- TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAACGTCAG
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAACGTCAG
EX899495       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EY896416       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EY919051       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
FD555244       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
FD943495       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EV547344       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
FY451863       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EW738044       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EW728442       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EV546758       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EY895266       --> TCTCATAAAGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
FD983262       --> TCTCATAAGGTACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
FD546268       --> ...........ACAAGAACTGAAGTGCCATAACAAGAAGAAAAATGTCAG
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               201    -    251
UN17676        --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-G-GCATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. landra
EV551705       <-- AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTAAG-GCATTGCA  Raphanus sativus cv Early Scarlet Globe
EY896416       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. maritimus
EY919051       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. landra
FD555244       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. landra
FD943495       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAGACGCTAAG-GCATTGCA  Raphanus sativus cv Early Scarlet Globe
EV547344       --> AAATTTTCGAAAAAACAAAAGAGACAGAGAGAAACGCTA-GAGCATAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus sativus cv GSK3-1
EW738044       --> AAATTTTCGAAAAAACAAAAGAGACAGAGAGAAACGCTA-GAGCATAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTAAG-GCATTGCA  Raphanus sativus cv Early Scarlet Globe
EV546758       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. maritimus
FD983262       --> AAAATTTCGAAATAACAAAAGAGACA-G-AGAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. landra
FD546268       --> AAATTTTCGAAATAACAAAAGAGACA-A-AGAAACGCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> ..........................cagaaAAACGCTA-G-GCATTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> ..........................cagaaAAACGCTA-G-GCATTGCA  Raphanus raphanistrum subsp. landra
EX766581       --> ...................................GCTA-GAGCATTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN17676        --> T-AAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TTAAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. landra
EV551705       <-- T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- ...........................................TTAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> T-AAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv Early Scarlet Globe
EY896416       --> TTAAAATCTT-AAAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. maritimus
EY919051       --> TTAAAATCTT-AAAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. landra
FD555244       --> TTAAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. landra
FD943495       --> T-AAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv Early Scarlet Globe
EV547344       --> T-AAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> TTAAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv GSK3-1
EW738044       --> T-AAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> T-AAAATCTT-AAAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv Early Scarlet Globe
EV546758       --> T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> TTAAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. maritimus
FD983262       --> TTAAAATCTT-AGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. landra
FD546268       --> T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> TTAAAATCTT-AAAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> TTAAAATCTT-AAAAATCGTTGTCATCTTCTTCAACCATGTATTTAGCAA  Raphanus raphanistrum subsp. landra
EX766581       --> T-AAAATCTTTAGAAATCGTCGTCATCTTCTTCAGCCATGTATTTAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN17676        --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTAC
EV551705       <-- GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTATCTTTC
EV536622       <-- GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD974215       <-- GCTC-TCTTCT-GCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EX899495       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EY896416       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EY919051       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD555244       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD943495       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EV547344       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCGCTCTTTC
FY451863       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EW738044       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EW728442       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EV546758       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTATCTTTC
EY895266       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD983262       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD546268       --> GCTCCCCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCCTTC
EW737415       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
FD553512       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC
EX766581       --> GCTCCTCTTCTTGCTGTTTCATCTCCCTCCTCTTCTCCTCGCTCTCTTTC

               351    -    401
UN17676        --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EV551705       <-- TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EV536622       <-- TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FD974215       <-- TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EW723797       <-- ............................ACGCTCTCACCGCTTCGTTGTG
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EX899495       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EY896416       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EY919051       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FD555244       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTC
FD943495       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EV547344       --> TCCCTGTGCGTGTGTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FY451863       --> TCCCTGTGAGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EW738044       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EW728442       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EV546758       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EY895266       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FD983262       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FD546268       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EW737415       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
FD553512       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCACCGCTTCGTTGTG
EX766581       --> TCCCTGTGCGTGTTTGGAGGGAACCTCAACGCTCTCAGCGCTTCGTTGTG

               401    -    451
UN17676        --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EV551705       <-- CATGTTCAAACAGAAGGCAATCCTCGAGTCGAACGCGTTCTGCGGCTCGT
EV536622       <-- CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD974215       <-- CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EW723797       <-- CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EX899495       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EY896416       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EY919051       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD555244       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCAT
FD943495       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EV547344       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FY451863       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EW738044       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EW728442       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EV546758       --> CATGTTCAAACAGAAGGCAATCCTCGAGTCGAACGCGTTCTGCGGCTCGT
EY895266       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD983262       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD546268       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EW737415       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
FD553512       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT
EX766581       --> CATGTTCAAACAGAAGGCAATCCTCGAGTTGAACGCGTTCTGCGGCTCGT

               451    -    501
UN17676        --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TGGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. landra
EV551705       <-- TCGTGGAGTAGATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- TCGTGGAGTAGATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- TCGTGGAGTAGATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ...............................................TTG  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> TCGTGGAGTAAATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Early Scarlet Globe
EY896416       --> TGGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. maritimus
EY919051       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. landra
FD555244       --> TCGTGGAGTAGATGTCTCCCGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. landra
FD943495       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Early Scarlet Globe
EV547344       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> TCGTGGAGTAGATGTCTCCAGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus sativus cv GSK3-1
EW738044       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Early Scarlet Globe
EV546758       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> TGGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. maritimus
FD983262       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. landra
FD546268       --> TCGTGGAGTAGATGTCTCCTGTTTCCTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> TCGTGGAGTAAATGTCTCCTGCTTCCTTTGACACCATATAACCCTTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> TCGTGGAGTAGATGTCTCCCGTTTCCTTTGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. landra
EX766581       --> TCGTGGAGTAGATGTCTCCTGTTTACTTCGACACCATATAACCCTTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN17676        --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EV551705       <-- TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EV536622       <-- TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD974215       <-- TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EW723797       <-- TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD987171       <-- TGATCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EX899495       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EY896416       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EY919051       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD555244       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD943495       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EV547344       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FY451863       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EW738044       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EW728442       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EV546758       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EY895266       --> TGGTCGATGGCCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD983262       --> TGATCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD546268       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
EW737415       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCACTAT
FD553512       --> TGGTCGATGGTCGCGTCGATCGCTCCGTCTCTTATGGCTTTAGCCACTAT
EX766581       --> TGGTCGATGGTCGCGTCGATTGCTCCGTCTCTTATGGCTTTAGCCA---T

               551    -    601
UN17676        --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EV551705       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EV536622       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD974215       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EW723797       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD987171       <-- GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EX755323       <-- .........................................GCTTCTGGG
EY901005       <-- ...........................................TTCTGGG
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> GCTTTCTGCATCTGCGACAGGGTTTGCAAAGTTCAGCCTTAGCTTCTGGG
EX899495       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EY896416       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EY919051       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD555244       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD943495       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EV547344       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTCAGCTTCTGGG
FY451863       --> GCTTTCCGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EW738044       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTCAGCTTCTGGG
EW728442       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EV546758       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EY895266       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD983262       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD546268       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTGCAGCCTTAGCTTCTGGG
EW737415       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
FD553512       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG
EX766581       --> GCTTTCTGCATCTGCGACAGGGTTTGCAGAGTTCAGCCTTAGCTTCTGGG

               601    -    651
UN17676        --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
EV551705       <-- CGACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- CCACGTCCGTTAGAGAGATTCTTGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- CCACGTCCGTTAGAGAGATTCTTGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- CCACGTCTGTTAGAGAGATTCTCGAGTAGGGAGTTGCTGATGTTGCGCAG  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- CCACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
EX755323       <-- CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> CCACGTCCGTTAGAGAGATTCTTGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus sativus cv Early Scarlet Globe
EY896416       --> CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. maritimus
EY919051       --> CCACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
FD555244       --> CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
FD943495       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus sativus cv Early Scarlet Globe
EV547344       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus sativus cv GSK3-1
EW738044       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> CCACGTCTGTTAGAGAGATTCTCGAGTAGG-AGTTGCTGATGTTGCGCAG  Raphanus sativus cv Early Scarlet Globe
EV546758       --> CGACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> CGACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. maritimus
FD983262       --> CCACGTCTGTAAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
FD546268       --> CGACGTCTGTTAGAGAGATTCTAGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> CCACGTCTGTAAAAAAGATTCTCGAGTAGG-AAATGCTGATGTTGCGCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> CGACGTCTGTAAGAAAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. landra
EX766581       --> CGACGTCTGTTAGAGAGATTCTCGAGTAGG-AGATGCTGATGTTGCGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN17676        --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TCCGGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EV551705       <-- CCCTGTTCTGA-TCACATTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
EV536622       <-- TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
FD974215       <-- TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
EW723797       <-- TCCTGTTCTGAATCACGTTGTGTCGGGAGTATGACAAATGAGGTTGTGAG
FD987171       <-- TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
EX755323       <-- TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EY901005       <-- TCCGGGTCTGA-TCAAGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
EX899495       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EY896416       --> TCCGGTTCTGA-TCAAGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EY919051       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
FD555244       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
FD943495       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EV547344       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
FY451863       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EW738044       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
EW728442       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGTATGACAA-TGAGGTTGTGAG
EV546758       --> CCCTGTTCTGA-TCACATTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
EY895266       --> TCCGGTTCTGA-TCACGTTGTGTCGG-AGTCTGACAA-TGAGGTTGTGAG
FD983262       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
FD546268       --> GGTTGTTCTGA-TCACATTGTGTCGG-AGTCTGACGA-TGAGGTTGTGAG
EW737415       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
FD553512       --> TCCTGTTCTGA-TCACGTTGTGTCGG-AGCCTGACAA-TGAGGTTGTGAG
EX766581       --> CCCTGTTCTGA-TCACATTGTGTCGG-AGTCTGACGA-TGAGGTTGCGAG

               701    -    751
UN17676        --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
EV551705       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCC....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- TCCTGTCCTCAGAGAAATGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- TACTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
EX755323       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Early Scarlet Globe
EY896416       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. maritimus
EY919051       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
FD555244       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
FD943495       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Early Scarlet Globe
EV547344       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> TCCTGTCCTCAGAGAA-TATCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus sativus cv GSK3-1
EW738044       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Early Scarlet Globe
EV546758       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. maritimus
FD983262       --> TACTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
FD546268       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCCTGAACGTTCCTGAA  Raphanus raphanistrum subsp. landra
EX766581       --> TCCTGTCCTCAGAGAA-TGTCTTTGCAAACTTCTCTTGAACGTTCCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN17676        --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- AAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. landra
EV551705       <-- GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. landra
EX755323       <-- GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTACGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- AAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. maritimus
FD939927       <-- ..................................................  Raphanus sativus var. oleiformis
FD949780       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv Early Scarlet Globe
EY896416       --> AAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. maritimus
EY919051       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. landra
FD555244       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. landra
FD943495       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv Early Scarlet Globe
EV547344       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv GSK3-1
EW738044       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus sativus cv Early Scarlet Globe
EV546758       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> AAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. maritimus
FD983262       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus raphanistrum subsp. landra
FD546268       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCAAAGTATGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> GAGCTCCAAG........................................  Raphanus raphanistrum subsp. landra
EX766581       --> GAGCTCCAAGTCACCAATCCTCACAGCATTGGTAAGTTCGAAGTATGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN17676        --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EV551705       <-- TAAGAGCCTCGTCCATTCCc..............................
EV536622       <-- ..................................................
FD974215       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EW723797       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGA.................
FD987171       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EX755323       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EY901005       <-- TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCG-TCTGGAATC
FD939927       <-- .............CATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
FD949780       <-- ..................................................
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAG..................
EX899495       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCT......
EY896416       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCG-TCTGGAATC
EY919051       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCT......
FD555244       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCT......
FD943495       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EV547344       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
FY451863       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EW738044       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGG....
EW728442       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCT......
EV546758       --> TAAGAGCCTCGTCCATTCCc..............................
EY895266       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGG....
FD983262       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCT......
FD546268       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
EW737415       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC
FD553512       --> ..................................................
EX766581       --> TAAGAGCCTTGTCCATTCCTTTCTGCATGAAGATGGATCGCTCTGGAATC

               851    -    901
UN17676        --> TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- TCACCCAGTAGGAGTCGAACTAGAATAGCCCACTTGTTGC..........  Raphanus raphanistrum subsp. landra
EV551705       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCG  Raphanus raphanistrum subsp. landra
EX755323       <-- TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCG  Raphanus raphanistrum subsp. maritimus
FD939927       <-- TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCT  Raphanus sativus var. oleiformis
FD949780       <-- ............AGTCGAACTAGAATGGCCCACTTGTTGCACTGGACTCT  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD579143       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896416       --> TCACCCAAGAG-AGTCGAACTAGAATAGCCCACTTGTTGCATTGGA....  Raphanus raphanistrum subsp. maritimus
EY919051       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555244       --> ..................................................  Raphanus raphanistrum subsp. landra
FD943495       --> TCACCCAGGAGGAGTCGAACTAGAATAGCCCACTTGTTGCACTGGACTCT  Raphanus sativus cv Early Scarlet Globe
EV547344       --> TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCT  Raphanus sativus cv GSK3-1
EW738044       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD983262       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546268       --> TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> TCACCCAAGAGGAGTCGA................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> ..................................................  Raphanus raphanistrum subsp. landra
EX766581       --> TCACCCAAGAGGAGTCGAACTAGAATAGCCCACTTGTTGCATTGGACTCG  Raphanus raphanistrum subsp. raphanistrum (NY)

               901    -    951
UN17676        --> GAAGCCTAGAGCAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- GAAGCCTAGAGCAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
EW723797       <-- ..................................................
FD987171       <-- GAAGCCTAGAGCAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
EX755323       <-- GAAGCCTAGAGCAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
EY901005       <-- GAAGCCTAGAGTAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
FD939927       <-- GAAGCCTAGAGCAGCAACAGGTGCTTTTCTAGCCGCATGG-AGGAGGCTC
FD949780       <-- GAAGC-TAGAGCAGCAACAGGTGCTTTCCTAGCCGCCTGG-AGGAGGCTC
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> GAAGCCTAGAGCAGCAACAG-TGCTT........................
EV547344       --> GAAGCCTAGAGCAGCAACAG-TGCTTTCCTAGCCGCCTGG-AGGAGGCTC
FY451863       --> GAAGCCTAGAGCAGCAACAGGTGCTTTTCTAGCCGCCTGGGAGGAG-CTC
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> GAAGCCTAGAGCAGC...................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> GAAGCCTAGAGCAGCA..................................

               951    -   1001
UN17676        --> TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
EW723797       <-- ..................................................
FD987171       <-- TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
EX755323       <-- TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
EY901005       <-- TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAAGTA
FD939927       <-- TCTTTTGCATCAGTGTACTCCAGTTGAACGGTCCGGATTTTACCGAGGTA
FD949780       <-- TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
FD947327       <-- ..................................................
FD947570       <-- ..................................................
EW732961       <-- ..................................................
EY946618       <-- ..................................................
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> TCTTTTGCATCAGTGTACTCGAGTTGGATGGTCCGGATTTTACCGAGGTA
FY451863       --> TCTTTTGCATCA......................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1001   -   1051
UN17676        --> AAACAAGTACCTACAGAACTGCTGGTTAGAATGAGCCTCAAATCTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- AAACAAGTACCTACAGAACTGCTGGTTAGAATGc................
EW723797       <-- ..................................................
FD987171       <-- AAACAAGTACCTACAGAACTGCTGGTTAGAATGAGCCTCAAATCTTGGTG
EX755323       <-- AAACAAGTACCTACAGAACTGCTGGTTAGAATGGGCCTCAAATCTTGGTG
EY901005       <-- AAACAAGTACCTACAGAACTGCTGGTTAGAATGAGCCTCAAATCTTGGTG
FD939927       <-- AAACAAGTACCTACAGAACTGCTGGTTTGAATGAGCCTCAAATCTTGGTG
FD949780       <-- AAACAAGTACCTACAGAACTGCTGGTTTGAATGAGCCTCAAATCTTGGTG
FD947327       <-- ................cagactgctgtttgATGAG-CTCAAATC--TGTG
FD947570       <-- ....................ctgctgtttgATGAGCCCCAAATCTTGGTG
EW732961       <-- ........................................AATCTTGGTG
EY946618       <-- ................................................TG
FD956445       <-- ..................................................
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> AAACAAGTACCTACAGAACTGCTGGT-AG-ATGAGCCTCAAAT.......
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1051   -   1101
UN17676        --> CTTT-GATCTCAGCTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- CTTTTGATCTCAACTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
EX755323       <-- CTTTCGATCTCAGCTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
EY901005       <-- CTTTTGATCTCAACTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
FD939927       <-- CTTTCGATCTCAGCTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
FD949780       <-- CTTTTGATCTCAGCTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
FD947327       <-- CTTT-GATCTCAGCT-CTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
FD947570       <-- CTTT-GATCTCAGCTTCTCAGCTTGGTCATAAAGGTTGTAGTGCAGGTAG
EW732961       <-- CTTTTGATCTCAACTTCTCAGCT-GGTCATAAAGGTTGTAGTGCAGGTAG
EY946618       <-- CTTT-GATCTCAACTTCTCAGCTTG-TCATAAAG-TTGTAGTGCAGGTAG
FD956445       <-- ......ATCTCAACTTCTCAGCTTG-TCATAAAGGTTGTAGTGCAGGTAG
EY899512       <-- ..................................................
FD579143       <-- ..................................................
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1101   -   1151
UN17676        --> TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
EX755323       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
EY901005       <-- TTGCGAAGCAACAGATTCAGAAGCGTTTCCTGACCCAACTCATCATGGCG
FD939927       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
FD949780       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
FD947327       <-- TTGCGAAGCAACAGATTCAGAAGTGTT-CCTGACCCAACTCATCATGGCG
FD947570       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTC-TGACCCAACTCATCATGGCG
EW732961       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTCCTGACCCAACTCATCATGGCG
EY946618       <-- T-GCGAAGCAACAGATTCAGAAGTGTTTC-TGACCCAACTCATCATGGCG
FD956445       <-- TTGCGAAGCAACAGATTCAGAAGTGTTTC-TGACCCAACTCATCATGGCG
EY899512       <-- .................................CCCAACTCATCATGGCG
FD579143       <-- .................................CCCAACTCATCATGGCG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1151   -   1201
UN17676        --> CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTC.....
EX755323       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGc..........
EY901005       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD939927       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD949780       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD947327       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD947570       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
EW732961       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
EY946618       <-- CAGAGT-GCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD956445       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
EY899512       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD579143       <-- CAGAGTTGCAGAATGGTGCAAAGACAAAAGAGTACCACGAATCTCAGCAA
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1201   -   1251
UN17676        --> GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV551705       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA  Raphanus raphanistrum subsp. maritimus
FD939927       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-TCTGGA  Raphanus sativus var. oleiformis
FD949780       <-- GATCACCAGTCATCTCATAACTCAGAGAGTAGTAAAAATACAA-TCTCGA  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- GATCACCAGTCATCTCATAACTCAGAGAGTAGTAAAAATACAA-TCTCGA  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- GATCACCAGTCATCTCATAACTCAGAGAGTAGTAAAAATACGA-TCTCGA  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAAACCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA  Raphanus raphanistrum subsp. maritimus
FD579143       <-- GATCACCAGTCATCTCATAACTCAAAGAGTAGTAAAAATACAA-CCTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896416       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY919051       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555244       --> ..................................................  Raphanus raphanistrum subsp. landra
FD943495       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV547344       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> ..................................................  Raphanus sativus cv GSK3-1
EW738044       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD983262       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546268       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> ..................................................  Raphanus raphanistrum subsp. landra
EX766581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1251   -   1301
UN17676        --> AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
FD939927       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
FD949780       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTAAGACGAGCAA-TG
FD947327       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTAAGACGAGCAA-TG
FD947570       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTAAGACGAGCAA-TG
EW732961       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAAATG
EY946618       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
FD956445       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
EY899512       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
FD579143       <-- AGCTATCACATCAATGGTTCTCTTGTTCAAGCTCTTGAGACGAGCAA-TG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1301   -   1351
UN17676        --> CTAGCTGAAGAGCAA-GCTTTGGCCTCGTTGTACTTCTTCTGATCAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV551705       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536622       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987171       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX755323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901005       <-- CTAGCTGAAGAGCAA-GCTTTCGCCTCGGTGTACTTCTTCTGGTCAATCc  Raphanus raphanistrum subsp. maritimus
FD939927       <-- CTAGCTGAAGAGCAA-GCTTTCGCCTCGTTGTACTTCTTCTGATCAATAA  Raphanus sativus var. oleiformis
FD949780       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGTTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Early Scarlet Globe
FD947327       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGTTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Early Scarlet Globe
FD947570       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGTTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Early Scarlet Globe
EW732961       <-- CTAGCTGAAGAGCAAAGCTTTGGCCTCGCTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY946618       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGCTATACTTCTTCTGATCAATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD956445       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGCTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY899512       <-- CTAGCTGAAGAGCAA-GCTTTCGCCTCGGTGTACTTCTTCTGGTCAATCA  Raphanus raphanistrum subsp. maritimus
FD579143       <-- CTAGCTGAAGAGCAA-GCTTTGGCCTCGCTGTACTTCTTCTGATCAATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD969737       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899495       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896416       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY919051       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555244       --> ..................................................  Raphanus raphanistrum subsp. landra
FD943495       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV547344       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451863       --> ..................................................  Raphanus sativus cv GSK3-1
EW738044       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW728442       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY895266       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD983262       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546268       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737415       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD553512       --> ..................................................  Raphanus raphanistrum subsp. landra
EX766581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN17676        --> GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
FD949780       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
FD947327       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
FD947570       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
EW732961       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
EY946618       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
FD956445       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
EY899512       <-- GAAAAAGAAGGACAATGAAGTAGCAGTAAATCTCAAGCTCTACAGGCACG
FD579143       <-- GAAAAAGAAGGACAATGAAGTAGCCGTAAATCTCAAGCTCTACAGGCACG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1401   -   1451
UN17676        --> TGCTTGGAGGAAGCCAAGGGAGGAGTGGATGAAGCAGTATCAACCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- TGCTTGGAGGAAGCCAAGGGAGGAGTGGATGc..................
FD949780       <-- TGCTTGGAGGAAGCCAAGGGAGGAGTGGATGAAGCTGTATCAACCTCCAT
FD947327       <-- TGCTTGGAGGAAGCCAAGGGAGGAGTGGATGAAGCTGTATCAACCTCCAT
FD947570       <-- TGCTTGGAGGAAGCCAAGGGAGGAGTGGATGAAGCTGTATCAACCTCCAT
EW732961       <-- TGCTTGGAGGAAGCCAAAGGAGGAGTGGATGAAGCAGTATCAACCTCCAT
EY946618       <-- TGCTTGGAGGAAGCCAAAGGAGGAGTGGATGAAGCAGTATCAACCTCCAT
FD956445       <-- TGCTTGGAGGAAGCCAAAGGAGGAGTGGATGAAGCAGTATCAACCTCCAT
EY899512       <-- TGCTTGGAGGAAGCCAAGGGAGGAGTGGACGAAGCAGTATCAACCTCCAT
FD579143       <-- TGCTTGGAGGAAGCCAAAGGAGGAGTGGATGAAGCAATATCAACCTCCAT
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1451   -   1501
UN17676        --> CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
FD947327       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
FD947570       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
EW732961       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
EY946618       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGC--GGGGCT
FD956445       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
EY899512       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGCGCGTGGGGCT
FD579143       <-- CTCATGTTCATCACTCTTGGGAACGAAGGAAGAGAGACGAGCGTGGGGCT
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1501   -   1551
UN17676        --> CAGATCCAGGAACCAAAGCGAAGTCAAGGAACGAAGAGACGACGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- CAGATCCAGGAACCAAAGCGAAGTCAAGGAACc.................
FD947327       <-- CAGATCCAGGAACCAAAGCGAAGTCAAGGAACGAAGAGACGACGGAAGAC
FD947570       <-- CAGATCCAGGAACCAAAGCGAAGTCAAGGAACGAAGAGACGACGGAAGGC
EW732961       <-- CAGTTCCAGGAACCAAAGCCAAGTCAAGGAACGAAGAGACGACGGAAGAG
EY946618       <-- CAGATCCAGGAACCAAAGCCAAGTCAAGGAACGAAGAGACGACGGAAGAG
FD956445       <-- CAGATCCAGGAACCAAAGCCAAGTCAAGGAACGAAGAGACGACGGAAGAG
EY899512       <-- CAGATCCAGGAACCAAAGCGAAGTCAAGGAACGAGGAGACGACGGAAGAC
FD579143       <-- CAGATCCAGGAACCAAAGCCAAGTCAAGGAACGAAGAGACGACGGAAGAG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1551   -   1601
UN17676        --> GTTAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- GTGAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
FD947570       <-- GTGAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
EW732961       <-- GTTAGCTTCTGCCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
EY946618       <-- GTTAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
FD956445       <-- GTTAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
EY899512       <-- GTGAGCTTCTGTCTCAGCCCGACGGTGAGACGCACGGCGCGAGCGACGCG
FD579143       <-- GTTAGCTTCTGTCTCAGACCGACGGTGAGACGCACGGCGCGAGCGACGCG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1601   -   1651
UN17676        --> GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGATGCAATCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGCTGCAATCTCCT
FD947570       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGCTGCAATCTCCT
EW732961       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGATGCAATCTCCT
EY946618       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGATGCAATCTCCT
FD956445       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGATGCAATCTCCT
EY899512       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGCTGCAATCTCCT
FD579143       <-- GCGGACTTCTTTGGTGTATGAGCCGGTATCGATCAGAGATGCAATCTCCT
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1651   -   1701
UN17676        --> TCAGATGATGCAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- TCAGATGATGAAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
FD947570       <-- TCAGATGATGAAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
EW732961       <-- TCAGATGATGCAGTGTTGAGGTG...........................
EY946618       <-- TCAGATGATGCAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
FD956445       <-- TCAGATGATGCAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
EY899512       <-- TCAGATGATGAAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
FD579143       <-- TCAGATGATGCAGTGTTGAGGTGGTGGAGGAGACGAGGGATTGAGCTGGG
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1701   -   1751
UN17676        --> GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCGT
FD947570       <-- GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCGT
EW732961       <-- ..................................................
EY946618       <-- GTGTGATTGTCCTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCTT
FD956445       <-- GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCTT
EY899512       <-- GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCTT
FD579143       <-- GTGTGGTTGTCTTTCATCTCCACGTCTTGAGTCGTCGTCATCGTTATCTT
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1751   -   1801
UN17676        --> CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTTT--CTGGCTGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567423       <-- ..................................................
EV551705       <-- ..................................................
EV536622       <-- ..................................................
FD974215       <-- ..................................................
EW723797       <-- ..................................................
FD987171       <-- ..................................................
EX755323       <-- ..................................................
EY901005       <-- ..................................................
FD939927       <-- ..................................................
FD949780       <-- ..................................................
FD947327       <-- CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTTTTTCTGGCTGTcc.
FD947570       <-- CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTTT--CTGGCTGTGCG
EW732961       <-- ..................................................
EY946618       <-- CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTT---CTGGCTGT...
FD956445       <-- CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTT---CTGGCTGTcc.
EY899512       <-- CTTCTTC---TTGGCGGATCTCAAGTGTTTTTTTTTT--CTGGCTGTGCc
FD579143       <-- CTTCTTCTTCTCGGCGGATCTCAAGTGTTTTTTTTT---CTGGCTGTcc.
FD969737       --> ..................................................
EX899495       --> ..................................................
EY896416       --> ..................................................
EY919051       --> ..................................................
FD555244       --> ..................................................
FD943495       --> ..................................................
EV547344       --> ..................................................
FY451863       --> ..................................................
EW738044       --> ..................................................
EW728442       --> ..................................................
EV546758       --> ..................................................
EY895266       --> ..................................................
FD983262       --> ..................................................
FD546268       --> ..................................................
EW737415       --> ..................................................
FD553512       --> ..................................................
EX766581       --> ..................................................

               1801   -   1851
UN17676        --> GAGGT..
                   ~~~~~~~
EV567423       <-- .......
EV551705       <-- .......
EV536622       <-- .......
FD974215       <-- .......
EW723797       <-- .......
FD987171       <-- .......
EX755323       <-- .......
EY901005       <-- .......
FD939927       <-- .......
FD949780       <-- .......
FD947327       <-- .......
FD947570       <-- GAGGTcc
EW732961       <-- .......
EY946618       <-- .......
FD956445       <-- .......
EY899512       <-- c......
FD579143       <-- .......
FD969737       --> .......
EX899495       --> .......
EY896416       --> .......
EY919051       --> .......
FD555244       --> .......
FD943495       --> .......
EV547344       --> .......
FY451863       --> .......
EW738044       --> .......
EW728442       --> .......
EV546758       --> .......
EY895266       --> .......
FD983262       --> .......
FD546268       --> .......
EW737415       --> .......
FD553512       --> .......
EX766581       --> .......