Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17679

               1      -     51
UN17679        --> GGGGGATCCTCAACAGAACCAATCGTCCATTTGTTCTTCTGCACAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- ...............................gGTTCTTCTGCACAATCTC
EY894988       <-- ..................................................
EY894539       <-- ..................................................
FD573312       <-- ..................................................
EW713407       --> GGGGGATCCTCAACAGAACCAATCGTCCATTTGTTCTTCTGCACAATCTC
EW713408       --> ...GGATCCTCAACAGAACCAATCGTCCATTTGTTCTTCTGCACAATCTC
EY898495       --> ............ggAGAACCAATCGTCCATTTGTTCTTCTGCACAATCTC
FD535403       --> ..............................ggGTTCTTCTGCACAATCTC
FD557912       --> ...............................gGTTCTTCTGCACAATCTC
EY922068       --> ......................................ggGCACAATCTC
EY900105       --> ........................................ggACAATCTC
EY899137       --> ..................................................
FD569038       --> ..................................................

               51     -    101
UN17679        --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EY894988       <-- ..................................................
EY894539       <-- ..................................................
FD573312       <-- ..................................................
EW713407       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EW713408       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EY898495       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
FD535403       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
FD557912       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EY922068       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EY900105       --> TCACACTTCTATTTCTCCCTCTCTTTTCACAAGGGAAGGGTGTAGAAGAA
EY899137       --> .......................................ggGTAGAAGAA
FD569038       --> ..................................................

               101    -    151
UN17679        --> ACCAAAAAAAAAACTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- ACCAAAAAAAAA-CTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. maritimus
EY894988       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894539       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD573312       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW713407       --> ACCAAAAAAAA--CTTAAACAAAAAAAGTAATAATATATAACTCAAAAAA  Raphanus sativus var. oleiformis
EW713408       --> ACCAAAAAAAA--CTTAAACAAAAAAAGTAATAATATATAACTCAAAAAA  Raphanus sativus var. oleiformis
EY898495       --> ACCAAAAAAAAAACTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. maritimus
FD535403       --> ACCAAAAAAAAA-CTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. maritimus
FD557912       --> ACCAAAAAAAAAACTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. landra
EY922068       --> ACCAAAAAAAAAACTTAAACAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. landra
EY900105       --> ACCAAAAAAAAAACTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. maritimus
EY899137       --> ACCAAAAAAAAAACTTAAGCAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus raphanistrum subsp. maritimus
FD569038       --> gaaccAAAAAAAACTTAAACAAAA-GAGTAATAATATA--ACTCAAAAAA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN17679        --> CCAAAAAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- CCAAAAAAAA------TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EY894988       <-- ....................................TGTCAAGTTGTTAT
EY894539       <-- ..................................................
FD573312       <-- ..................................................
EW713407       --> TAAAATAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EW713408       --> TAAAATAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EY898495       --> CCAAAAAAAA------TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
FD535403       --> CCAAAAAAAA------TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
FD557912       --> CCAAAAAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EY922068       --> CCAAAAAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EY900105       --> CCAAAAAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
EY899137       --> CCAAAAAAAAA-----TAATAATACAGAATGGGTGGTGTCAAGTTGTTAT
FD569038       --> CCAAAAAAAAAAATAATAATAATACAGAATGGGTGGTGTCAAGTTGTTAT

               201    -    251
UN17679        --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY894988       <-- TCACCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY894539       <-- ............TCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
FD573312       <-- ......................AGCTATGGTAGCTAAATCCGTCAAAGCG
EW713407       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EW713408       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY898495       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
FD535403       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
FD557912       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY922068       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY900105       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
EY899137       --> TCACCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG
FD569038       --> TCATCTTTGGTCTCTTGATCTTAGCTATGGTAGCTAAATCCGTCAAAGCG

               251    -    301
UN17679        --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- ACCTACCCATTGACTACATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY894988       <-- ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY894539       <-- ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
FD573312       <-- ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EW713407       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EW713408       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY898495       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
FD535403       --> ACCTACCCATTGACTACATCTTGCATCAATGGACAAGGTTGCATCGGAGA
FD557912       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY922068       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY900105       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
EY899137       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA
FD569038       --> ACCTACCCATTGACTAAATCTTGCATCAATGGACAAGGTTGCATCGGAGA

               301    -    351
UN17679        --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
EY894988       <-- TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
EY894539       <-- TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
FD573312       <-- TGATGATGAACTTGAATCTTTAATGGATTCAGAGACAAACCGTCGTCAGC
EW713407       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAAC
EW713408       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAAC
EY898495       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
FD535403       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
FD557912       --> TGATGATGAACTTGAATCTCTAATGGATTCGGAGACAAACCGTCGTCAGC
EY922068       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
EY900105       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
EY899137       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC
FD569038       --> TGATGATGAACTTGAATCTCTAATGGATTCAGAGACAAACCGTCGTCAGC

               351    -    401
UN17679        --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EY894988       <-- TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EY894539       <-- TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
FD573312       <-- TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EW713407       --> TCGCTAGAGGACGTCGTTACGTTGGCTATGATGCTCTCAAAAAGAACAAT
EW713408       --> TCGCTAGAGGACGTCGTTACGTTGGCTATGATGCTCTCAAAAAGAACAAT
EY898495       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
FD535403       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
FD557912       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EY922068       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EY900105       --> TCGCTAGAGGATGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
EY899137       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT
FD569038       --> TCGCTAGAGGACGTCGTTACATTGGCTATGATGCTCTCAAAAAGAACAAT

               401    -    451
UN17679        --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EY894988       <-- GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EY894539       <-- GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
FD573312       <-- GTGCCTTGCAATAGACGTGGCCGGTTTTACTACGATTGCAAGAAGAGGAG
EW713407       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EW713408       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EY898495       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
FD535403       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
FD557912       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EY922068       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
EY900105       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAAAAGAGGAG
EY899137       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG
FD569038       --> GTGCCTTGCAATAGACGTGGCCGGTCTTACTACGATTGCAAGAAGAGGAG

               451    -    501
UN17679        --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EY894988       <-- AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EY894539       <-- AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
FD573312       <-- AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EW713407       --> AAGGAA---TCCTTACAGGCGTGGATGCAGTGCGATCACGCATTGTTATA
EW713408       --> AAGGAA---TCCTTACAGGCGTGGATGCAGTGCGATCACGCATTGTTATA
EY898495       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
FD535403       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
FD557912       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EY922068       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EY900105       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
EY899137       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA
FD569038       --> AAGGAACAATCCTTACAGACGTGGATGCAGTGCGATCACGCATTGTTATA

               501    -    551
UN17679        --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
EY894988       <-- GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
EY894539       <-- GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
FD573312       <-- GGTACGCTAAGTGAGAACAAA-TGATAGAGAGA--GGATGATTTGATTCA  Raphanus sativus cv Early Scarlet Globe
EW713407       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAG--GATGATTTGATTCA  Raphanus sativus var. oleiformis
EW713408       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAG--GATGATTTGATTCA  Raphanus sativus var. oleiformis
EY898495       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
FD535403       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
FD557912       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. landra
EY922068       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. landra
EY900105       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
EY899137       --> GGTACGCTAAGTGAGAACAAAATGATAGAGAGAGAGGATGATTTGATTCA  Raphanus raphanistrum subsp. maritimus
FD569038       --> GGTACGCTAAGTGAGAACAAA-TGATAGAGAGAG--GATGATTTGATTCA  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN17679        --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
EY894988       <-- ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
EY894539       <-- ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
FD573312       <-- ACAACGTTCTATCTTTATTTTTCATTTTTGATCGTTAATGATTTCCTTTC  Raphanus sativus cv Early Scarlet Globe
EW713407       --> ACAACGTTCTATCTTTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus sativus var. oleiformis
EW713408       --> ACAACGTTCTATCTTTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus sativus var. oleiformis
EY898495       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
FD535403       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
FD557912       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. landra
EY922068       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. landra
EY900105       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
EY899137       --> ACCACGGTCTATCTCTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus raphanistrum subsp. maritimus
FD569038       --> ACAACGTTCTATCTTTATTCTTCATTCTTGATCGTTAATGATTTCCTTTC  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN17679        --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TTAACGTACCCTATGCTATACGTATGATTTCTTATGTCTTTTTTTTTATC  Raphanus raphanistrum subsp. maritimus
EY894988       <-- TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTTTTATC  Raphanus raphanistrum subsp. maritimus
EY894539       <-- TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATC  Raphanus raphanistrum subsp. maritimus
FD573312       <-- TTAACGTACCCTATGTTATACGTATGATTTTTTATGTCTTTTTTT--ATT  Raphanus sativus cv Early Scarlet Globe
EW713407       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATT  Raphanus sativus var. oleiformis
EW713408       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATT  Raphanus sativus var. oleiformis
EY898495       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATC  Raphanus raphanistrum subsp. maritimus
FD535403       --> TTAACGTACCCTATGCTATACGTATGATTTCTTATGTCTTTTTTTTTATC  Raphanus raphanistrum subsp. maritimus
FD557912       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT-TATC  Raphanus raphanistrum subsp. landra
EY922068       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT-TATC  Raphanus raphanistrum subsp. landra
EY900105       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTTTTATC  Raphanus raphanistrum subsp. maritimus
EY899137       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTTTTATC  Raphanus raphanistrum subsp. maritimus
FD569038       --> TTAACGTACCCTATGTTATACGTATGATTTCTTATGTCTTTTTTT--ATT  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN17679        --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
EY894988       <-- TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
EY894539       <-- TAATCATCATCATGGTGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
FD573312       <-- TAATCATCATCATGATGCATATAAGCTTTTGATACGTTGATATATCGCCT  Raphanus sativus cv Early Scarlet Globe
EW713407       --> TAATCATCATCATGATGCATATAAGCTTTTGATACGTTGATATATCGCCT  Raphanus sativus var. oleiformis
EW713408       --> TAATCATCATCATGATGCATATAAGCTTTTGATACGTTGATATATCGCCT  Raphanus sativus var. oleiformis
EY898495       --> TAATCATCATCATGGTGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
FD535403       --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
FD557912       --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. landra
EY922068       --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. landra
EY900105       --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
EY899137       --> TAATCATCATCATGATGCATATAAGCTTTTGATTCGTTGATATATCGCCT  Raphanus raphanistrum subsp. maritimus
FD569038       --> TAATCATCATCATGATGCATATAAGCTTTTGATACGTTGATATATCGCCT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN17679        --> ATTTTCCTTTGTTGTTGTCTTTCCATTTCGTTTCGTTCATATATTAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
EY894988       <-- ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
EY894539       <-- ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
FD573312       <-- ATTTTCCTTTGTTGTTGTCTTTCCATTTCGTTTCGTTCATATATTAAGTT
EW713407       --> ATTTTCCTTTGTTGTTGTCTTTCCATTTCGTTTCGTTCATATATTAAGTT
EW713408       --> ATTTTCCTTTGTTGTTGTCTTTCCATTTCGTTTCGTTCATATATTAAGTT
EY898495       --> ATTTTCCTTTGTTGTTGTCTTTC-ATTTCGTTTCGTTCATATATTAAGTT
FD535403       --> ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
FD557912       --> ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
EY922068       --> ATTTTCCTTTGTTGTTGTCTT-CCATTTCGTTTCGTTCATATATTAAGTT
EY900105       --> ATTTTCCTT.........................................
EY899137       --> ATTTTCCTTTGTTGTTGTCCTTCCATTTCGTTTCGTTCATATATTAAGTT
FD569038       --> ATTTTCCTTTGTTGTTGTCTTTCCATTTCGTTTCGTTCATATATTAAGTT

               751    -    801
UN17679        --> CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG
EY894988       <-- CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG
EY894539       <-- CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG
FD573312       <-- CCGTTTGTTTATTATATACATCATGATGTTTTTGTATTTTTACAATTAAG
EW713407       --> CCGTTTGTCTATTA....................................
EW713408       --> CCGTTTGTCTATTA....................................
EY898495       --> CCGTTTGTCTATTATATACATCATGATGTTTT-GTATTTCTACAtta...
FD535403       --> CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTA..
FD557912       --> CCGTTTGTCTATTATATAC...............................
EY922068       --> CCGTTTGTCTATTATATACATCATGATGTTTT-GTATT-CTACA-TT-AG
EY900105       --> ..................................................
EY899137       --> CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG
FD569038       --> CCGTTTGTCTATTATATACATCATGATGTTTTTGTATTTCTACAATTAAG

               801    -    851
UN17679        --> CATTTGTTTATATACTACGCCTTAATTGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD531072       <-- CATTTGTTTAc.....................
EY894988       <-- CATTTGTTTATATACTACGCCTTAATTGGACC
EY894539       <-- CATTTGTTTATATACc................
FD573312       <-- CATTTGTTTtttt...................
EW713407       --> ................................
EW713408       --> ................................
EY898495       --> ................................
FD535403       --> ................................
FD557912       --> ................................
EY922068       --> CATTTGTTataacta.................
EY900105       --> ................................
EY899137       --> CATTTGTTTATATACTACGCCTTA-TTGGACC
FD569038       --> CATTTGTTTAT.....................