1      -     51
UN17708        --> GGAGGACTAAAAAGGCTTCCGCATAAATCTGAAGGAAAAGGAAGAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- .........AAAAGGCTTCCGCATAAATCTGAAGGAAAAGGAAGAGAAAA
EW727041       <-- ..................................................
EW727337       <-- ..................................................
EW735658       <-- ..................................................
EW735961       <-- ..................................................
EX901660       <-- ..................................................
EY942073       <-- ..................................................
FD544951       <-- ..................................................
FD934209       <-- ..................................................
EX759364       <-- ..................................................
EW737595       <-- ..................................................
FD539134       <-- ..................................................
EX776402       <-- ..................................................
FD536805       <-- ..................................................
EX768210       <-- ..................................................
EY911174       <-- ..................................................
FD983509       <-- ..................................................
FD584145       <-- ..................................................
EY902114       <-- ..................................................
EV544319       <-- ..................................................
EY901940       <-- ..................................................
EY904706       <-- ..................................................
EY926037       <-- ..................................................
EY928313       <-- ..................................................
FD575657       <-- ..................................................
EW733360       --> GGAGGACTAAAAAGGCTTCCGCATAAATCTGAAGGAAAAGGAAGAGAAAA
EY915301       --> ..................................ggAAAGGAAGAGAAAA
FD987454       --> ..................................ggAAAGGAAGAGAAAA
EY905759       --> ........................................ggAGAGAAAA
FD571911       --> .........................................ggGAGAAAA
FD540274       --> ..................................................
FY445011       --> ..................................................
EX886423       --> ..................................................
EX898013       --> ..................................................
EY945872       --> ..................................................
EY947336       --> ..................................................
FD580334       --> ..................................................
EY929663       --> ..................................................
FD548811       --> ..................................................
FD560126       --> ..................................................
FD570922       --> ..................................................
FD937635       --> ..................................................
EV536869       --> ..................................................
EV548690       --> ..................................................
EX765474       --> ..................................................
EX772461       --> ..................................................
EY905522       --> ..................................................
FD542793       --> ..................................................
FD549246       --> ..................................................
EX755229       --> ..................................................
FD571662       --> ..................................................
EX764256       --> ..................................................
FY430165       --> ..................................................

               51     -    101
UN17708        --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv GSK3-1
EW727041       <-- .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- ..gGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- ..gGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus var. oleiformis
EX759364       <-- ...................ACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- .........................................C----TTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- .........................................C----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD536805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD584145       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- ..................................................  Raphanus sativus var. oleiformis
EY928313       <-- ..................................................  Raphanus sativus var. oleiformis
FD575657       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW733360       --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. landra
EY905759       --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> GACGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
FD540274       --> ..CGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> ..CGCACACCGAAGA-TCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv GSK3-1
EX886423       --> .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus var. oleiformis
EX898013       --> .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
EY945872       --> .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> ...GCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> .ggGCACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> ....gACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTCCTTCTTCG  Raphanus sativus var. oleiformis
FD548811       --> ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. landra
FD570922       --> ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
FD937635       --> ...ggACACCGAAGACTCGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus sativus var. oleiformis
EV536869       --> ..gggcacaccgaacgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> ........ggacaccgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> ..........ggaccgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> ..................GACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. landra
EY905522       --> .......ggacacccgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> .......ggacacccgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> ........ggacaccgaaGACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> ...................ACTCCCAATCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> .......................ggAATCATCTCCTTCCTTC----TTCG  Raphanus sativus cv Early Scarlet Globe
EX764256       --> ...........................TCATCTCCTTCCTTC----TTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> .................................................G  Raphanus sativus cv GSK3-1

               101    -    151
UN17708        --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- TCTCTGAAACTA--ATTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv GSK3-1
EW727041       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- TCTCTGAAACTA--ATTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- TCTCTGAAACTA--ATTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus var. oleiformis
EX759364       <-- TCTCTGAAACT---AATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- TCTCTGAAACTA--ATTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. landra
FD536805       <-- TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- ....CGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- .......gaaactaatTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- .......................CAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. landra
FD584145       <-- ........................AGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- ..................................................  Raphanus sativus var. oleiformis
EY928313       <-- ..................................................  Raphanus sativus var. oleiformis
FD575657       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW733360       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. landra
EY905759       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD540274       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv GSK3-1
EX886423       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus var. oleiformis
EX898013       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
EY945872       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus var. oleiformis
FD548811       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. landra
FD570922       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD937635       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus var. oleiformis
EV536869       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> TCTCCGAAACTAAA--TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> TCTCCGAAACTAAA--TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. landra
EY905522       --> TCTCTGAAACTAA---TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> TCTCTGAAACTAA---TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> TCTCCGAAACTAAA--TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> TCTCTGAAACTAA---TTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv Early Scarlet Globe
EX764256       --> TCTCCGAAACTAAAAATTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> TCTCTGAAACTAA--TTTTGATTCAGCAGCCATGGCTAATGCAGCGTCAG  Raphanus sativus cv GSK3-1

               151    -    201
UN17708        --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv GSK3-1
EW727041       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus var. oleiformis
EX759364       <-- GCATGGCAGTCCACGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- GCATGGCAGCCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. landra
FD536805       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. landra
FD584145       <-- GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- gaATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- ..................................................  Raphanus sativus var. oleiformis
EY928313       <-- ..................................................  Raphanus sativus var. oleiformis
FD575657       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW733360       --> GCATGGCAGCCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. landra
EY905759       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
FD540274       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv GSK3-1
EX886423       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus var. oleiformis
EX898013       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
EY945872       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus var. oleiformis
FD548811       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. landra
FD570922       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
FD937635       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus var. oleiformis
EV536869       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAATTTCTCTAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAATTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. landra
EY905522       --> GCATGGCAGTCCACGATGACTGCAAGCTCAAGTTTCCCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> GCATGGCAGTCCACGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAATTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> GCATGGCAGTCCACGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus sativus cv Early Scarlet Globe
EX764256       --> GAATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTCGAGCTCAAGGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> GCATGGCAGTCCATGATGACTGCAAGCTCAAGTTTCTGGAGCTCAAGGCC  Raphanus sativus cv GSK3-1

               201    -    251
UN17708        --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EW727041       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EW727337       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EW735658       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EW735961       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX901660       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY942073       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD544951       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD934209       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX759364       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCTAGGAGCAGCAGAAACA
EW737595       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD539134       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX776402       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGTAGCAGTAACA
FD536805       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX768210       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY911174       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD983509       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD584145       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY902114       <-- AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EV544319       <-- ......................TTTACAAGATCGAGGAGCAGCAGAAACA
EY901940       <-- ..................................................
EY904706       <-- ..................................................
EY926037       <-- ..................................................
EY928313       <-- ..................................................
FD575657       <-- ..................................................
EW733360       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY915301       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD987454       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY905759       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD571911       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD540274       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FY445011       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX886423       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX898013       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY945872       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY947336       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD580334       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EY929663       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD548811       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD560126       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD570922       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD937635       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EV536869       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EV548690       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX765474       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX772461       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGTAGCAGTAACA
EY905522       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD542793       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FD549246       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX755229       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCTAGGAGCAGCAGAAACA
FD571662       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
EX764256       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA
FY430165       --> AAGCGGACTTACCGTTTCATCGTTTACAAGATCGAGGAGCAGCAGAAACA

               251    -    301
UN17708        --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv GSK3-1
EW727041       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus var. oleiformis
EX759364       <-- AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. landra
FD536805       <-- AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- AGTGGTCGTCGAGAAACTCGGCTAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. landra
FD584145       <-- AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- .....TCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- ..................................................  Raphanus sativus var. oleiformis
EY928313       <-- ..................................................  Raphanus sativus var. oleiformis
FD575657       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW733360       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. landra
EY905759       --> AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> AGTGGTCGTCGAGAAACTCGGCGAGCTTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
FD540274       --> AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv GSK3-1
EX886423       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus var. oleiformis
EX898013       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
EY945872       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus var. oleiformis
FD548811       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACTACTTTG  Raphanus raphanistrum subsp. landra
FD570922       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
FD937635       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus var. oleiformis
EV536869       --> AGTGGTCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. landra
EY905522       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> AGTGATCGTCGAGAAAGTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv Early Scarlet Globe
EX764256       --> AGTGGTCGTCGAGAAACTCGGCTAGCCTGGTCAATCCCACGACGACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> AGTGGTCGTCGAGAAACTCGGCGAGCCTGGTCAATCCCACGACGACTTTG  Raphanus sativus cv GSK3-1

               301    -    351
UN17708        --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv GSK3-1
EW727041       <-- CTGC-AGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- CTGC-AGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- CTGCTAGTCTCCCTGCCGATGGATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus var. oleiformis
EX759364       <-- CTGCTTGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- CTGCTAGTCTCCCTGC-GATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. landra
FD536805       <-- CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. landra
FD584145       <-- CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGTCGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- CTGCTTGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- ..................................................  Raphanus sativus var. oleiformis
EY928313       <-- ..................................................  Raphanus sativus var. oleiformis
FD575657       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW733360       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. landra
EY905759       --> CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
FD540274       --> CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv GSK3-1
EX886423       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus var. oleiformis
EX898013       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
EY945872       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus var. oleiformis
FD548811       --> CTGCTAGTCTCCCTGCCGATGGATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. landra
FD570922       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
FD937635       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus var. oleiformis
EV536869       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGTCGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCCGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> CTGCTAGTCTCCCTGC-GATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. landra
EY905522       --> CTGCTTGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> CTGCTTGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> CAGCTTGTCTCCCTGCTGATGAATGCCGTTACGCCGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> CTGCTTGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv Early Scarlet Globe
EX764256       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> CTGCTAGTCTCCCTGCCGATGAATGCCGTTACGCTGTTTTCGATTTCGAT  Raphanus sativus cv GSK3-1

               351    -    401
UN17708        --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv GSK3-1
EW727041       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGTTCT.............  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus sativus var. oleiformis
EX759364       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGCCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus raphanistrum subsp. landra
FD536805       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGTAAGATTTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus raphanistrum subsp. landra
FD584145       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTTTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- TTCGTCACCGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTTTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- ..................................tttttTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- .......................................TTCGTCGCATG  Raphanus sativus var. oleiformis
EY928313       <-- ....................................tttTTCGTCGCATG  Raphanus sativus var. oleiformis
FD575657       <-- ....................................tttTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
EW733360       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGTAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTCTTCGTCGCATG  Raphanus raphanistrum subsp. landra
EY905759       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
FD540274       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv GSK3-1
EX886423       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus var. oleiformis
EX898013       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
EY945872       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTCTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus var. oleiformis
FD548811       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCATGATTTTCTTCGTCGCATG  Raphanus raphanistrum subsp. landra
FD570922       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
FD937635       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTCTTCGTCGCATG  Raphanus sativus var. oleiformis
EV536869       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> TTCGTCACCGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> TTCGTCACCGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATTTTCTTCGTCGCATG  Raphanus raphanistrum subsp. landra
EY905522       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> TTCGTCACCGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv Early Scarlet Globe
EX764256       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> TTCGTCACTGCTGAGAGCTGCCAGAAGAGCAAGATCTTCTTCGTCGCATG  Raphanus sativus cv GSK3-1

               401    -    451
UN17708        --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv GSK3-1
EW727041       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAGGATGATTTACGCGAGCTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAGGATGATTTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATTTACGCGAGCTCTA  Raphanus sativus var. oleiformis
EX759364       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- GTCTCCGGACACGGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. landra
FD536805       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATTTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- GTCTCCAGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. landra
FD584145       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATTTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- GTCTCCGGACACAGCAAGAGTGAGAAACAAGATGATCTACGCGAGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- GTCTCCGGACACAGCAAGAGTGGGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATTTACGCGAGCTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- GTCTCCGGACACGGCAAGAGTGAGAAGCAAGATGATTTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus var. oleiformis
EY928313       <-- GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus var. oleiformis
FD575657       <-- GTCCCCGGACACAGGGAGAGTGAGAAGCAAGATGATTTACGCGAGCTTTA  Raphanus sativus cv Early Scarlet Globe
EW733360       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> GTCTCCAGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. landra
EY905759       --> GTCTCCGGACACAGCAAGAGTGAGAAACAAGATGATCTACGCGAGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> GTCACCGGACACAGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
FD540274       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv GSK3-1
EX886423       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTAC-CGAGCTCTA  Raphanus sativus var. oleiformis
EX898013       --> GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
EY945872       --> GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> GTCTCCGGACACAGCAAGAGTGAGGAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus var. oleiformis
FD548811       --> GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. landra
FD570922       --> GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
FD937635       --> GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus var. oleiformis
EV536869       --> GTCTCCGGACACGGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> GTCTCCGGACACAGCAAGAGTGGGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> GTCTCCGGACACGGCGAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. landra
EY905522       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv Early Scarlet Globe
EX764256       --> GTCACCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> GTCTCCGGACACAGCAAGAGTGAGAAGCAAGATGATCTACGCGAGCTCTA  Raphanus sativus cv GSK3-1

               451    -    501
UN17708        --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv GSK3-1
EW727041       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
EX759364       <-- AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. landra
FD536805       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- AGGATAGGTTTAAACGTGAGCTTGATAGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. landra
FD584145       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
EY928313       <-- AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
FD575657       <-- AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EW733360       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> AGGATAGGTTTAAACGTGAGCTTGATAGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. landra
EY905759       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
FD540274       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv GSK3-1
EX886423       --> AGGATAGGTTTAAGCGCGAGCTTGATG-AATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
EX898013       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EY945872       --> AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
FD548811       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. landra
FD570922       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
FD937635       --> AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus var. oleiformis
EV536869       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> AGGATAGGTTTAAACGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. landra
EY905522       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> AGGATAGGTTTAAGCGTGAGCTCGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EX764256       --> AGGATAGGTTTAAGCGTGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> AGGATAGGTTTAAGCGCGAGCTTGATGGAATTCAAGTTGAGCTTCAAGCT  Raphanus sativus cv GSK3-1

               501    -    551
UN17708        --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EW727041       <-- ..................................................
EW727337       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EW735658       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EW735961       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX901660       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY942073       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD544951       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD934209       <-- ACCGATCCAACCGAGATGGATCTCGTTGTTTTCAAAAGCCGAGCCAACTG
EX759364       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EW737595       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD539134       <-- ACTGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX776402       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD536805       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX768210       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY911174       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD983509       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD584145       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY902114       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EV544319       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY901940       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY904706       <-- ACTGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY926037       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY928313       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD575657       <-- ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EW733360       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY915301       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD987454       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY905759       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD571911       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD540274       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FY445011       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX886423       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX898013       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY945872       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY947336       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGTCGAGCCAACTG
FD580334       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAAC..
EY929663       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD548811       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD560126       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD570922       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD937635       --> ACCGATCCAACCGAGATGGATCTCGTTGTTTTCAAAAGCCGAGCCAACTG
EV536869       --> ACTGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EV548690       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX765474       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX772461       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EY905522       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD542793       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD549246       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
EX755229       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FD571662       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCGACTG
EX764256       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG
FY430165       --> ACCGATCCAACCGAGATGGATCTCGATGTTTTCAAAAGCCGAGCCAACTG

               551    -    601
UN17708        --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv GSK3-1
EW727041       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAACAAAA-AATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAACAAAA-AATATTTGGTTGAA  Raphanus sativus var. oleiformis
EX759364       <-- AGGAGGAGTTACATACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- AGGAGGAGTTA---ACATCC-TCCAAGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. landra
FD536805       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. landra
FD584145       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- AGGAGGAGTTACATACATCCCTCCAGGAAAAAAAAATATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- AGGAGGAGTTA---ACATCC-TCCAAGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus var. oleiformis
EY928313       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus var. oleiformis
FD575657       <-- AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
EW733360       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAA---TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. landra
EY905759       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
FD540274       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv GSK3-1
EX886423       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus var. oleiformis
EX898013       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
EY945872       --> AGGAGGAGTTA---CCATCCCTCCAGGAAACAAAA-AATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> AGGAGGAGTTA---ACATCCCTCCAG--AAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus var. oleiformis
FD548811       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. landra
FD570922       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
FD937635       --> AGGAGGAGTTA---CCATCCCTCCAGGAAACAAAA-AATATTTGGTTGAA  Raphanus sativus var. oleiformis
EV536869       --> AGGAGGAGTTA---ACATCC-TCCAAGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. landra
EY905522       --> AGGAGGAGTTACATACATCCCTCCAGGAAAAAAAAATATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> AGGAGGAGTTACATACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> AGGAGGAGTTA---CCATCCCTCCAGGAAAAAAAAATATATTTGGTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> AGGAGGAGTTACATACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus sativus cv Early Scarlet Globe
EX764256       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAAA-TATATTTGGTTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> AGGAGGAGTTA---ACATCCCTCCAGGAAAAAAA--TATATTTGGTTGAA  Raphanus sativus cv GSK3-1

               601    -    651
UN17708        --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv GSK3-1
EW727041       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus var. oleiformis
EX759364       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. landra
FD536805       <-- TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. landra
FD584145       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- TCCAACTACTATT-ACTGAATTATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- TCCAACTACTATT-ACTGAATGATACGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus var. oleiformis
EY928313       <-- TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus var. oleiformis
FD575657       <-- TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
EW733360       --> TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAA...........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTC................  Raphanus raphanistrum subsp. landra
EY905759       --> TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
FD540274       --> TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv GSK3-1
EX886423       --> TCCGATTACTATT-ACTGAATGATATGCTTGTTCTT-AAGTTT-GCTGTG  Raphanus sativus var. oleiformis
EX898013       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
EY945872       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus var. oleiformis
FD548811       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTTTGCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. landra
FD570922       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
FD937635       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus var. oleiformis
EV536869       --> TCCAACTACTATT-ACTGAATTATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. landra
EY905522       --> TCCAACTACTATT-ACTGAATTATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> TCCAACTACTATTTACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv Early Scarlet Globe
EX764256       --> TCCAACTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> TCCAATTACTATT-ACTGAATGATATGCTTGTTCTTTAAGTTT-GCTGTG  Raphanus sativus cv GSK3-1

               651    -    701
UN17708        --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EW727041       <-- ..................................................
EW727337       <-- AAGGCA-AC.........................................
EW735658       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EW735961       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX901660       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY942073       <-- AAG...............................................
FD544951       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTC.........
FD934209       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX759364       <-- AAGGCACACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EW737595       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD539134       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX776402       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD536805       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX768210       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY911174       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTCCATTGGGTCTTTGTCTTC
FD983509       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD584145       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY902114       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EV544319       <-- AAGGCA-ACCACCAACTAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY901940       <-- AAGGCACACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY904706       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTTTTC
EY926037       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY928313       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD575657       <-- AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EW733360       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY915301       --> ..................................................
FD987454       --> ..................................................
EY905759       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD571911       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD540274       --> AAAGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FY445011       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX886423       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGG-TCTTTGTCTTC
EX898013       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY945872       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY947336       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD580334       --> ..................................................
EY929663       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD548811       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCaaga.....
FD560126       --> GAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD570922       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD937635       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EV536869       --> AAAGCA-ACCACCAACCAAA-CAACTTCATTTCATTGGGTC.........
EV548690       --> AAGGCA-ACCACCAACTAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX765474       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX772461       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EY905522       --> AAGGCACACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD542793       --> AAGGCACACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD549246       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX755229       --> AAGGCACACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FD571662       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
EX764256       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC
FY430165       --> AAGGCA-ACCACCAACCAAAACAACTTCATTTCATTGGGTCTTTGTCTTC

               701    -    751
UN17708        --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EW727041       <-- ..................................................
EW727337       <-- ..................................................
EW735658       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EW735961       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EX901660       <-- TTCCTATTGTCTTTTATATTTTTTTTtgggc...................
EY942073       <-- ..................................................
FD544951       <-- ..................................................
FD934209       <-- TTCCTATTGTCTTTTATATTTTTTTT--TTGGTCCTTGCAGTGTTTTGCT
EX759364       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EW737595       <-- TTCCTATTGTCTTTCATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
FD539134       <-- TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EX776402       <-- TTCCTATTGTCCTTTATATTTTTTT-----GGTCCTTGCAGTGTTTTGCT
FD536805       <-- TTCCTATTGTCTTTTATATTTTTTTTTTTTGGTCCTTGCAGTGTTTTGCT
EX768210       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EY911174       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTACT
FD983509       <-- TTCCTATTGTCCTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
FD584145       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EY902114       <-- TTCCTATTGTCTTTTATATTTTTTTT-TTTGGTCCTTGCAGTGTTTTGCT
EV544319       <-- TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EY901940       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EY904706       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EY926037       <-- TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EY928313       <-- TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
FD575657       <-- TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EW733360       --> TTCCTATTGTCTTTCATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EY915301       --> ..................................................
FD987454       --> ..................................................
EY905759       --> TTCCTATTGTCTTT-ATATTTTT...........................
FD571911       --> TTCCTATTGTCTTTTATATT..............................
FD540274       --> TTCCTATTGTCTTTTATATTTTTTTT-TTTGGTCCTTGCAGTGTTT-GCT
FY445011       --> TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EX886423       --> TTCCTATTGTCTTT-ATATTTTTTTT----GGTCC...............
EX898013       --> TTCCTAT-GTCTTTTATATTTTTTTT----GGgc................
EY945872       --> TTCCTATTGTCTTTTATATTTTTTTT----AGTCCTTGCAGTGTTTTGCT
EY947336       --> TTCCTATTGTCTTT-ATATTTTTTTT---TGGTCCTTGCAGTGTTT-GCT
FD580334       --> ..................................................
EY929663       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
FD548811       --> ..................................................
FD560126       --> TTCCTATTGTCCTTTATATTTTTTTT----G...................
FD570922       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
FD937635       --> TTCCTATTGTCTTTTATATTTTTTTT--TTGGTCCTTGCAGTGTTTTGCT
EV536869       --> ..................................................
EV548690       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EX765474       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
EX772461       --> TTCCTATTGTCCTTTATATTTTTT------GGTCCTTGCAGTGTTTTGCT
EY905522       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTT-GCT
FD542793       --> TTCCTATTGTCTTTTATATTTTTTTT----GGTCCTTGCAGTGTTTTGCT
FD549246       --> TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EX755229       --> TTCCTATTGTCTTTTATAT...............................
FD571662       --> TTCTTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
EX764256       --> TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT
FY430165       --> TTCCTATTGTCTTTTATATTTTTTTT---TGGTCCTTGCAGTGTTTTGCT

               751    -    801
UN17708        --> TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus cv GSK3-1
EW727041       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW735658       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTCACCATTGTGTAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW735961       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTCACCATTGTGTAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX901660       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY942073       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD544951       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934209       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCctg...................  Raphanus sativus var. oleiformis
EX759364       <-- T.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW737595       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGT........  Raphanus sativus cv Rat-Tail Radish #3870
FD539134       <-- TAAAACTT-AA-GAGGTTTGGCTTGTACTCT...................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776402       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. landra
FD536805       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACC.............  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768210       <-- TAAAACTT-AAAAAGATTTGGTTTGTGCTCTTT.................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911174       <-- TGAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983509       <-- TAAAACTT-AA-GAGATTTGGCTTATGCTCTTTTACCATTGTGTAAGAAC  Raphanus raphanistrum subsp. landra
FD584145       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY902114       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544319       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901940       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904706       <-- TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926037       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus var. oleiformis
EY928313       <-- TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus var. oleiformis
FD575657       <-- TAAAACTT-AAAAAGATTTGGCTTGTGCTCTTT-ACCATTGTGTAAGAAC  Raphanus sativus cv Early Scarlet Globe
EW733360       --> TAAACTTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAgaac.  Raphanus sativus cv Rat-Tail Radish #3870
EY915301       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987454       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905759       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571911       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD540274       --> TAAA-CTT--A-GAGATTTGGCTTGTGCTCTTTa................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445011       --> TAAAACTTTAA-GAGATTTGGCTTGTGCTC....................  Raphanus sativus cv GSK3-1
EX886423       --> ..................................................  Raphanus sativus var. oleiformis
EX898013       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945872       --> TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTaaaa..............  Raphanus sativus cv Rat-Tail Radish #3870
EY947336       --> TAAA-CTT-TA-GAGATTTGGCTTGTGCTCTTTTAC-ATTGTG.......  Raphanus sativus cv Rat-Tail Radish #3870
FD580334       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY929663       --> TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus var. oleiformis
FD548811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560126       --> ..................................................  Raphanus raphanistrum subsp. landra
FD570922       --> TAAAACTT-AA-AAGATTTGGCTTGTGCTCTTT-ACCATTGTGTAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD937635       --> TAAACTTT-AA-GAGATTTGGCTTGT........................  Raphanus sativus var. oleiformis
EV536869       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548690       --> TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765474       --> TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTACCATTGTG.......  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772461       --> TAAA-CTT-AA-GAGATTTGGCTTGTGCTCTTTTAC-ATTGTGTAAGAAA  Raphanus raphanistrum subsp. landra
EY905522       --> TAAAACTT-AA-GAGATTTGGCTTGTGCTCTTTTAC-ATTGTGTAAGAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542793       --> TAAA-CTT-AA-GAGATTTGGCTTGTGCTC....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549246       --> TAAAACTT-AA-GAGATTTGGCTTGTGCTCaaa.................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755229       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571662       --> TAAAACTT-AAAAAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAC  Raphanus sativus cv Early Scarlet Globe
EX764256       --> TAAAACTT-AA.......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430165       --> TAAAACTTTAA-GAGATTTGGCTTGTGCTCTTTTACCATTGTGTAAGAAA  Raphanus sativus cv GSK3-1

               801    -    851
UN17708        --> CCCCCC-AAACCCTTTACCAAAAGATGAATCTTGTTGGCACATTGTGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- CCCCCC-AAACCCTT-ACCAAAAGATGAATCTatg...............
EW727041       <-- ..................................................
EW727337       <-- ..................................................
EW735658       <-- CCC...............................................
EW735961       <-- CCCCCC-AAACCCTTTACCAAAAGATGAATCTTATTGGCACATTGTGTCG
EX901660       <-- ..................................................
EY942073       <-- ..................................................
FD544951       <-- ..................................................
FD934209       <-- ..................................................
EX759364       <-- ..................................................
EW737595       <-- ..................................................
FD539134       <-- ..................................................
EX776402       <-- CCCCCC-AAACCCTTTATCAAAAGATGAATCTTGTTGGCACATTGTGTCG
FD536805       <-- ..................................................
EX768210       <-- ..................................................
EY911174       <-- CCCCCC-AAACCCTTTACCAAAAGATGAATCTTATTGGC...........
FD983509       <-- CCCCCC-AACCCCTTTACCAAAAGATGAATCTTGTTGGC...........
FD584145       <-- CCCCCC-AAACCCTTTACCAAAAGATGAATCTTATTGGCACA........
EY902114       <-- CCCCCC-AAACCCTTTACCAAA-GATGAATCTTGTTGGCAC.........
EV544319       <-- CCCCCC-AAACCCTTTACCAAAAGATGTATCTTGTTGGCACATTGTGTCG
EY901940       <-- CCCCCC-AACCCCTTTACC...............................
EY904706       <-- CCCCCC-AAACCCTTTACCAAAAGATGAATCTTGTTGGCACATTGTGTCG
EY926037       <-- CCCCCC-AAACCCTTTACCAAAAGATGAATCTTATTGGC...........
EY928313       <-- TCCCCC-AAACCCTTTACC...............................
FD575657       <-- CCCCCCCAAACCCTTTAC................................
EW733360       --> ..................................................
EY915301       --> ..................................................
FD987454       --> ..................................................
EY905759       --> ..................................................
FD571911       --> ..................................................
FD540274       --> ..................................................
FY445011       --> ..................................................
EX886423       --> ..................................................
EX898013       --> ..................................................
EY945872       --> ..................................................
EY947336       --> ..................................................
FD580334       --> ..................................................
EY929663       --> CCCCC--AAACCCTT...................................
FD548811       --> ..................................................
FD560126       --> ..................................................
FD570922       --> CCCCCC-AAACCCTTTACaaagatg.........................
FD937635       --> ..................................................
EV536869       --> ..................................................
EV548690       --> CCCCCC-AAAC.......................................
EX765474       --> ..................................................
EX772461       --> CC................................................
EY905522       --> -CCCCC-AAACC-TTTACCAAAAaaaaa......................
FD542793       --> ..................................................
FD549246       --> ..................................................
EX755229       --> ..................................................
FD571662       --> CCCCCC-AAACCCTTTACCAAAAGATG.......................
EX764256       --> ..................................................
FY430165       --> CCCCCC-AAACCCTTTACCAAAAGATGAATCTTATTGGCACATTGTGTCG

               851    -    901
UN17708        --> TATCTTCGTCTTTGCAAAACTATGTATCTAGTGATCCATGGATTTAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- ..................................................
EW727041       <-- ..................................................
EW727337       <-- ..................................................
EW735658       <-- ..................................................
EW735961       <-- TATCTTCGTCTatgg...................................
EX901660       <-- ..................................................
EY942073       <-- ..................................................
FD544951       <-- ..................................................
FD934209       <-- ..................................................
EX759364       <-- ..................................................
EW737595       <-- ..................................................
FD539134       <-- ..................................................
EX776402       <-- TATCTTCGTCTatgtatctag.............................
FD536805       <-- ..................................................
EX768210       <-- ..................................................
EY911174       <-- ..................................................
FD983509       <-- ..................................................
FD584145       <-- ..................................................
EY902114       <-- ..................................................
EV544319       <-- TATCTTCGTCTTTGCAAAACTATGTATCTAGTGATCCATGGATTTAAACT
EY901940       <-- ..................................................
EY904706       <-- T.................................................
EY926037       <-- ..................................................
EY928313       <-- ..................................................
FD575657       <-- ..................................................
EW733360       --> ..................................................
EY915301       --> ..................................................
FD987454       --> ..................................................
EY905759       --> ..................................................
FD571911       --> ..................................................
FD540274       --> ..................................................
FY445011       --> ..................................................
EX886423       --> ..................................................
EX898013       --> ..................................................
EY945872       --> ..................................................
EY947336       --> ..................................................
FD580334       --> ..................................................
EY929663       --> ..................................................
FD548811       --> ..................................................
FD560126       --> ..................................................
FD570922       --> ..................................................
FD937635       --> ..................................................
EV536869       --> ..................................................
EV548690       --> ..................................................
EX765474       --> ..................................................
EX772461       --> ..................................................
EY905522       --> ..................................................
FD542793       --> ..................................................
FD549246       --> ..................................................
EX755229       --> ..................................................
FD571662       --> ..................................................
EX764256       --> ..................................................
FY430165       --> ..................................................

               901    -    951
UN17708        --> ATTGTGACAACATAAGTTAGGATATAAAATAATAATTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439000       <-- .........................................
EW727041       <-- .........................................
EW727337       <-- .........................................
EW735658       <-- .........................................
EW735961       <-- .........................................
EX901660       <-- .........................................
EY942073       <-- .........................................
FD544951       <-- .........................................
FD934209       <-- .........................................
EX759364       <-- .........................................
EW737595       <-- .........................................
FD539134       <-- .........................................
EX776402       <-- .........................................
FD536805       <-- .........................................
EX768210       <-- .........................................
EY911174       <-- .........................................
FD983509       <-- .........................................
FD584145       <-- .........................................
EY902114       <-- .........................................
EV544319       <-- ATTGTGACAACATAAGTTAGGATATAAAATAATAATTTATT
EY901940       <-- .........................................
EY904706       <-- .........................................
EY926037       <-- .........................................
EY928313       <-- .........................................
FD575657       <-- .........................................
EW733360       --> .........................................
EY915301       --> .........................................
FD987454       --> .........................................
EY905759       --> .........................................
FD571911       --> .........................................
FD540274       --> .........................................
FY445011       --> .........................................
EX886423       --> .........................................
EX898013       --> .........................................
EY945872       --> .........................................
EY947336       --> .........................................
FD580334       --> .........................................
EY929663       --> .........................................
FD548811       --> .........................................
FD560126       --> .........................................
FD570922       --> .........................................
FD937635       --> .........................................
EV536869       --> .........................................
EV548690       --> .........................................
EX765474       --> .........................................
EX772461       --> .........................................
EY905522       --> .........................................
FD542793       --> .........................................
FD549246       --> .........................................
EX755229       --> .........................................
FD571662       --> .........................................
EX764256       --> .........................................
FY430165       --> .........................................